View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18573_high_22 (Length: 203)
Name: NF18573_high_22
Description: NF18573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18573_high_22 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 32889179 - 32889356
Alignment:
| Q |
18 |
gaatgatcttgtatcgggtgtaatttgaaggacaaaatggataaactcaatctgaaatatcattgtcgcaatttggacctcttgatgatccattgttgtc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
32889179 |
gaatgatcttgtatcgggtgtaatttgaaggacaaaatggataaactcaatctgaaatatcattgtcacaatttggacctcttgatgatccattgttgtc |
32889278 |
T |
|
| Q |
118 |
tcttaaggtaccaaacataatagaaagaattatcttccaaagtttacataaaatatcattgaagaagaataatatagc |
195 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
32889279 |
tcttaaggtaccaaacataatagaaagaattatcttccaaactttacataaaatatcattgaagaagaagaatgtagc |
32889356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University