View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18573_high_3 (Length: 434)

Name: NF18573_high_3
Description: NF18573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18573_high_3
NF18573_high_3
[»] scaffold0002 (3 HSPs)
scaffold0002 (10-324)||(394476-394790)
scaffold0002 (321-416)||(394005-394100)
scaffold0002 (337-418)||(394107-394191)
[»] chr5 (7 HSPs)
chr5 (10-324)||(21185079-21185394)
chr5 (325-416)||(21184607-21184698)
chr5 (140-232)||(21629253-21629347)
chr5 (142-232)||(21621795-21621887)
chr5 (10-115)||(21629346-21629451)
chr5 (337-416)||(21184711-21184793)
chr5 (70-114)||(21621889-21621933)
[»] scaffold0116 (4 HSPs)
scaffold0116 (11-324)||(32475-32790)
scaffold0116 (10-324)||(41860-42176)
scaffold0116 (321-414)||(33171-33264)
scaffold0116 (337-415)||(33080-33161)
[»] chr4 (3 HSPs)
chr4 (10-324)||(10232386-10232702)
chr4 (368-416)||(10233096-10233144)
chr4 (337-416)||(10232974-10233056)
[»] scaffold0925 (2 HSPs)
scaffold0925 (10-324)||(193-509)
scaffold0925 (337-416)||(803-885)
[»] chr6 (2 HSPs)
chr6 (10-324)||(22388992-22389308)
chr6 (337-416)||(22388616-22388698)
[»] scaffold0081 (1 HSPs)
scaffold0081 (10-204)||(1453-1647)
[»] scaffold0253 (2 HSPs)
scaffold0253 (10-204)||(7671-7865)
scaffold0253 (10-204)||(17096-17290)
[»] chr7 (1 HSPs)
chr7 (49-324)||(19241170-19241469)


Alignment Details
Target: scaffold0002 (Bit Score: 275; Significance: 1e-153; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 10 - 324
Target Start/End: Complemental strand, 394790 - 394476
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  394790 ataactctacttatgagagttaatttctcgatgatgtggtaatttctagcaatcaaatgtatgtcaaaggacattgacttatatgtgttttagttaatat 394691  T
Q  110 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactcg 209  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  394690 aattaggagtttttaaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactcg 394591  T
Q  210 tgtaagtaaatgagtatataaatttcaataagtgttaagtgatttcgatgagcgaaattagttgaaaatatatgattaaaagtgtcgattatgattcgac 309  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  394590 tgtaagtgaatgagtatataaattttaataagtgttaagtgatttcgatgagcgaaattaattggaaatatatgattaaaagtgtcgattatgattcgac 394491  T
Q  310 gcgataatttataat 324  Q
    |||||||||||||||    
T  394490 gcgataatttataat 394476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 321 - 416
Target Start/End: Complemental strand, 394100 - 394005
Alignment:
Q  321 taattgttgagttattatgtactggcttaactgaatttcccaaattcttacttgctggaatttctatgcttatacataaatgaagaggaacatatg 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  394100 taattgttgagttattatgtactggcttaactgaatttcccaaattcttacttgctggaatttctatgcttatacataaatgaagaggaacatatg 394005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 337 - 418
Target Start/End: Complemental strand, 394191 - 394107
Alignment:
Q  337 atgtactggcttaactgaatttcccaaattcttactt---gctggaatttctatgcttatacataaatgaagaggaacatatgtt 418  Q
    ||||||| | |||| |||||| || ||||||||||||   ||||||||||||||||||||| ||||||||| | |||||||||||    
T  394191 atgtactagtttaattgaattacctaaattcttacttactgctggaatttctatgcttataaataaatgaaaaagaacatatgtt 394107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 10 - 324
Target Start/End: Complemental strand, 21185394 - 21185079
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  21185394 ataactctacttgtgagagttaatttctcgatgatgtggtaatttctagcgatcaagtacatgtcaaaggacatcgacttatatgtgttttagttaatat 21185295  T
Q  110 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactc- 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21185294 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactct 21185195  T
Q  209 -gtgtaagtaaatgagtatataaatttcaataagtgttaagtgatttcgatgagcgaaattagttgaaaatatatgattaaaagtgtcgattatgattcg 307  Q
     |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  21185194 tgtgtaagtgaatgagtatataaatttcaataactgttaagtgatttcgatgagtgaaattagttggaaatatatgattaaaagtgtc-attatgattcg 21185096  T
Q  308 acgcgataatttataat 324  Q
    |||||||||||||||||    
T  21185095 acgcgataatttataat 21185079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 21184698 - 21184607
Alignment:
Q  325 tgttgagttattatgtactggcttaactgaatttcccaaattcttacttgctggaatttctatgcttatacataaatgaagaggaacatatg 416  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21184698 tgttgagttattatgtactggcttaaccgaatttcccaaattcttacttgctggaatttctatgcttatacataaatgaagaggaacatatg 21184607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 140 - 232
Target Start/End: Complemental strand, 21629347 - 21629253
Alignment:
Q  140 agtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactc--gtgtaagtaaatgagtatataaat 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| |||||||||||||||    
T  21629347 agtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactcttgtctaagtgaatgagtatataaat 21629253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 21621887 - 21621795
Alignment:
Q  142 tagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactc--gtgtaagtaaatgagtatataaat 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| |||||||||||||||    
T  21621887 tagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactcttgtctaagtgaatgagtatataaat 21621795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 21629451 - 21629346
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| ||||||| |||||||| |||||| ||||| ||||||||||||||||||||| |  || ||||| |||||| |||||||||||||| |||||||||    
T  21629451 ataactctacttgtgagagttaatttctcgatgacgtggtaatttctagcgatcaagtacatatcaaatgacatcaacttatatgtgtttgagttaatat 21629352  T
Q  110 aattag 115  Q
    ||||||    
T  21629351 aattag 21629346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 21184793 - 21184711
Alignment:
Q  337 atgtactggcttaactgaatttcccaaattcttactt---gctggaatttctatgcttatacataaatgaagaggaacatatg 416  Q
    ||||||| | |||| |||||| || ||||||||||||   ||||||||||||||||||||| ||||||||| | |||||||||    
T  21184793 atgtactagtttaattgaattacctaaattcttacttactgctggaatttctatgcttataaataaatgaaaaagaacatatg 21184711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 21621933 - 21621889
Alignment:
Q  70 atgtcaaaggacatcgacttatatgtgttttagttaatataatta 114  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||    
T  21621933 atgtcaaatgacatcaacttatatgtgtttgagttaatataatta 21621889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 253; Significance: 1e-140; HSPs: 4)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 11 - 324
Target Start/End: Original strand, 32475 - 32790
Alignment:
Q  11 taattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatata 110  Q
    ||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||    
T  32475 taattctacttgtgaaagttaatttctcgatgatgtggtaatttctagcgatcaagtacatgtcaaaggacatcgacttatatgtgttttagttaatata 32574  T
Q  111 attaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactc-- 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||      
T  32575 attaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttaattggtattactctt 32674  T
Q  209 gtgtaagtaaatgagtatataaatttcaataagtgttaagtgatttcgatgagcgaaattagttgaaaatatatgattaaaagtgtcgattatgattcga 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  32675 gtgtaagtgaatgagtatataaatttcaataagtgttaagtgatttcgatgaccgaaattagtttgaaatatatgattaaaagtgtcgattatgattcga 32774  T
Q  309 cgcgataatttataat 324  Q
    || |||||||||||||    
T  32775 cgtgataatttataat 32790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 10 - 324
Target Start/End: Original strand, 41860 - 42176
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| ||||||| |||||||| |||||| |||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  41860 ataactctacttgtgagagttaatttctcgatgatgtggcaatttctagcgatcaagtacatgtcaaaggacatcgacttatatgtgttttagttaatat 41959  T
Q  110 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactc- 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||     
T  41960 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatatttaattggtattactct 42059  T
Q  209 -gtgtaagtaaatgagtatataaatttcaataagtgttaagtgatttcgatgagcgaaattagttgaaaatatatgattaaaagtgtcgattatgattcg 307  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  42060 tgtgtaagtgaatgagtatataaatttcaataagtgttaagtgatttcgataagcgaaattagtttaaaatctatgattaaaagtgtcgattatgattcg 42159  T
Q  308 acgcgataatttataat 324  Q
    |||||||||||||||||    
T  42160 acgcgataatttataat 42176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 321 - 414
Target Start/End: Original strand, 33171 - 33264
Alignment:
Q  321 taattgttgagttattatgtactggcttaactgaatttcccaaattcttacttgctggaatttctatgcttatacataaatgaagaggaacata 414  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33171 taattgtttagttattatgtactggcttaatcgaatttcccaaattcttacttgctggaatttctatgcttatacataaatgaagaggaacata 33264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 415
Target Start/End: Original strand, 33080 - 33161
Alignment:
Q  337 atgtactggcttaactgaatttcccaaattcttactt---gctggaatttctatgcttatacataaatgaagaggaacatat 415  Q
    ||||||| | |||| |||||| || ||||||||||||   | ||||||||||||||||||||||||||||| | ||||||||    
T  33080 atgtactagtttaattgaattacctaaattcttacttattggtggaatttctatgcttatacataaatgaaaaagaacatat 33161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 10 - 324
Target Start/End: Original strand, 10232386 - 10232702
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  10232386 ataactctacttgtgagagttaatttctcgatgatgtggtaatttctagcgatcaagtacatgtcaaaggacatcgacttatatgtgttttagttaatat 10232485  T
Q  110 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactc- 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10232486 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattactct 10232585  T
Q  209 -gtgtaagtaaatgagtatataaatttcaataagtgttaagtgatttcgatgagcgaaattagttgaaaatatatgattaaaagtgtcgattatgattcg 307  Q
     |||||||| |||||| |||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||||||    
T  10232586 tgtgtaagtgaatgagcatatgaatttcaataagtgttaactgatttcgatgagtgaaattagttggaaatatatgatttaaagtgtcaattatgattcg 10232685  T
Q  308 acgcgataatttataat 324  Q
    |||||||||||||||||    
T  10232686 acgcgataatttataat 10232702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 10233096 - 10233144
Alignment:
Q  368 ttacttgctggaatttctatgcttatacataaatgaagaggaacatatg 416  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10233096 ttacttgctggaatttctatgcttatacataaatgaagagggacatatg 10233144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 416
Target Start/End: Original strand, 10232974 - 10233056
Alignment:
Q  337 atgtactggcttaactgaatttcccaaattcttactt---gctggaatttctatgcttatacataaatgaagaggaacatatg 416  Q
    ||||||| | |||| |||||| || || |||||||||   |||| |||||||||||||||| ||||||||| | |||||||||    
T  10232974 atgtactagtttaattgaattacctaagttcttacttactgctgaaatttctatgcttataaataaatgaaaaagaacatatg 10233056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0925 (Bit Score: 238; Significance: 1e-131; HSPs: 2)
Name: scaffold0925
Description:

Target: scaffold0925; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 10 - 324
Target Start/End: Original strand, 193 - 509
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| ||||||| | |||||| |||||| ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  193 ataactctacttgtaagagttaatttctcgatgatgtggtaatttctagcgatcaagtatatgtcaaaggacatcgatttatatgtgttttagttaatat 292  T
Q  110 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattac--t 207  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  |    
T  293 aattaggagtttttaaaaatataatatataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattttgtttaattggtattacttt 392  T
Q  208 cgtgtaagtaaatgagtatataaatttcaataagtgttaagtgatttcgatgagcgaaattagttgaaaatatatgattaaaagtgtcgattatgattcg 307  Q
     |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  393 tgtgtaagtgaacgagtatataaatttcaataagtgttaagtgatttcgatgagcgaaattagtttgaaatatatgattaaaagtgtcgattatgattcg 492  T
Q  308 acgcgataatttataat 324  Q
    |||||||||||||||||    
T  493 acgcgataatttataat 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0925; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 416
Target Start/End: Original strand, 803 - 885
Alignment:
Q  337 atgtactggcttaactgaatttcccaaattcttactt---gctggaatttctatgcttatacataaatgaagaggaacatatg 416  Q
    ||||||| | |||| |||||| || ||||||||||||   ||||||||||| |||||||||||||||| || | |||||||||    
T  803 atgtactagtttaattgaattacctaaattcttacttactgctggaatttcaatgcttatacataaataaaaaagaacatatg 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 238; Significance: 1e-131; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 10 - 324
Target Start/End: Complemental strand, 22389308 - 22388992
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| ||||||| | |||||| |||||| ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  22389308 ataactctacttgtaagagttaatttctcgatgatgtggtaatttctagcgatcaagtatatgtcaaaggacatcgatttatatgtgttttagttaatat 22389209  T
Q  110 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtattac--t 207  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  |    
T  22389208 aattaggagtttttaaaaatataatatataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattttgtttaattggtattacttt 22389109  T
Q  208 cgtgtaagtaaatgagtatataaatttcaataagtgttaagtgatttcgatgagcgaaattagttgaaaatatatgattaaaagtgtcgattatgattcg 307  Q
     |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  22389108 tgtgtaagtgaacgagtatataaatttcaataagtgttaagtgatttcgatgagcgaaattagtttgaaatatatgattaaaagtgtcgattatgattcg 22389009  T
Q  308 acgcgataatttataat 324  Q
    |||||||||||||||||    
T  22389008 acgcgataatttataat 22388992  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 22388698 - 22388616
Alignment:
Q  337 atgtactggcttaactgaatttcccaaattcttactt---gctggaatttctatgcttatacataaatgaagaggaacatatg 416  Q
    ||||||| | |||| |||||| || ||||||||||||   ||||||||||| |||||||||||||||| || | |||||||||    
T  22388698 atgtactagtttaattgaattacctaaattcttacttactgctggaatttcaatgcttatacataaataaaaaagaacatatg 22388616  T

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Target: scaffold0081 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 1647 - 1453
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| ||||||| |||||||| |||||| |||||||||||||||||||| |||||| |  |||||||||||||||||||||| |||||||||| ||||||    
T  1647 ataactctacttgtgagagttaatttctcgatgatgtggtaatttctagagatcaagtacatgtcaaaggacatcgacttatgtgtgttttagataatat 1548  T
Q  110 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtatt 204  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1547 aattaggagtttttgaacatataatacataagtagaagaaaatgttttgtaaatgatgaattgattagatagttatattatgtttatttggtatt 1453  T

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Target: scaffold0253 (Bit Score: 143; Significance: 6e-75; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 7865 - 7671
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| ||||||| |||||||| |||||| |||||||||||||||||||| ||| || |  ||||||||||||||||| ||||||||||||||||||||||    
T  7865 ataactctacttgtgagagttaatttctcgatgatgtggtaatttctagagattaagtacatgtcaaaggacatcgagttatatgtgttttagttaatat 7766  T
Q  110 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtatt 204  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7765 aattagtagtttttgacaatataatacataagtagaagaaaatgttttgtaaatgatgaattgattagatagttatattatgtttatttggtatt 7671  T

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Target: scaffold0253; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 17290 - 17096
Alignment:
Q  10 ataattctacttatgagagttgatttcttgatgatgtggtaatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatat 109  Q
    |||| ||||||| |||||||| |||||| |||||||||||||||||||| ||| || |  ||||||||||||||||| ||||||||||||||||||||||    
T  17290 ataactctacttgtgagagttaatttctcgatgatgtggtaatttctagagattaagtacatgtcaaaggacatcgagttatatgtgttttagttaatat 17191  T
Q  110 aattaggagtttttgaaaatataatacataagtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtatt 204  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17190 aattagtagtttttgacaatataatacataagtagaagaaaatgttttgtaaatgatgaattgattagatagttatattatgtttatttggtatt 17096  T

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Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 49 - 324
Target Start/End: Complemental strand, 19241469 - 19241170
Alignment:
Q  49 taatttctagcgatcaaatgtatgtcaaaggacatcgacttatatgtgttttagttaatataattaggagtttttgaaaatataatacata--------- 139  Q
    ||||| ||||| ||||| |  |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||             
T  19241469 taattcctagcaatcaagtacatgtcaaaggacatcgacttatatgtgttt-agttaatataattaagagtttttgaaaatatgatacatagaaaatatg 19241371  T
Q  140 -------agtagaagaaaaagttttgtaaatgatgaattgattagatagttatattatgtttatttggtatta--ctcgtgtaagtaaatgagtata-ta 229  Q
           | ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||| ||||||  || ||||||||||||||||||| ||    
T  19241370 atacataaatagaagaaaaagttttgtaaatgataaattgattagatagttctagtatgtttatttagtattaatcttgtgtaagtaaatgagtatatta 19241271  T
Q  230 aatttcaataagtgttaagtgatttcgatgagcgaaattag-ttgaaa-atatat----gattaaaagtgtcgattatgattcgacgcgataatttataa 323  Q
    | |||| |||| |||||||||||||  ||| |||||||| | |||||| ||||||     | ||||||| |||||||||||| |||||||||||||||||    
T  19241270 attttcgataaatgttaagtgatttaaatgtgcgaaattggtttgaaacatatattaaacaataaaagtatcgattatgatttgacgcgataatttataa 19241171  T

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