View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18574_high_8 (Length: 332)
Name: NF18574_high_8
Description: NF18574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18574_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 18 - 321
Target Start/End: Complemental strand, 41656466 - 41656163
Alignment:
| Q |
18 |
tctgattgttcaggtacagcaggataaggtcatttggaaagcggaaaggaacgggaaatattctgtatgtagcgcgtatagactgtgtattgaggaatta |
117 |
Q |
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| T |
41656466 |
tctgattgttcaggtacagcaggataagctcatttggaaagcggaaaggaacgggaaatattctgtatgtagcgcgtatagactgtgtgttgaggaatta |
41656367 |
T |
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| Q |
118 |
attgatacgtctcatttacggcacccggggtattggtcaggtatttggaggttaaaggttccgccaaaggttagaaatttaatttggcaagtatgtagag |
217 |
Q |
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| T |
41656366 |
attgatacgtctcatttacggcacccggggtattggtcaggtatttggaggttaaaggttccgccaaaggttagaaatttaatttggcaagtatgtagag |
41656267 |
T |
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| Q |
218 |
gagttctgtggactcgtatacgactgcttgataaaggagtgcaatgcccaactaattgtgtcagctgcgactccgccaatgaagatttatcgcacctttg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41656266 |
gagttctgtggactcgtatacgactgcttgataaaggagtgcaatgcccaactaattgtgtcagctgcgactccgccaatgaagatttatcgcacctttg |
41656167 |
T |
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| Q |
318 |
cttc |
321 |
Q |
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|||| |
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| T |
41656166 |
cttc |
41656163 |
T |
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