View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18575_low_29 (Length: 324)
Name: NF18575_low_29
Description: NF18575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18575_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 48 - 306
Target Start/End: Original strand, 10405128 - 10405395
Alignment:
| Q |
48 |
gatatctacgaaattggcttatattgcagtagatagtggaaatctttataggagtgtgagttctcta---------gttgaataaagaagaagcacgatc |
138 |
Q |
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| T |
10405128 |
gatatctacgaaattggcttatattgcagtagatagtggaaatctttataggagtgtgaattctctatttggaagtgttgaataaagaagaagcacgatc |
10405227 |
T |
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| Q |
139 |
accgtcaattttcgagaaggaatgtatctgaaaattggtgcattccaccttcgagctcctcgatctggattatacagccaagttccaagattgataaatc |
238 |
Q |
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| T |
10405228 |
accgtcaattttcgagaaggaatgtatctgaaaattggtgcattccaccttcgagctcctcgatctggattatacagccaagttccaagattgataaatc |
10405327 |
T |
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| Q |
239 |
ttttgaagatatataaacttgtcagcatgctactagctattatacataggtgtgatcaattgctctat |
306 |
Q |
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| T |
10405328 |
ttttgaagatatataaacttgtcagcatgctactagctattatacataggtgtgatcaattgctctat |
10405395 |
T |
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