View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18576_low_4 (Length: 519)

Name: NF18576_low_4
Description: NF18576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18576_low_4
NF18576_low_4
[»] chr8 (54 HSPs)
chr8 (20-144)||(15847129-15847253)
chr8 (20-144)||(35884430-35884554)
chr8 (20-144)||(35443328-35443452)
chr8 (14-144)||(43806533-43806663)
chr8 (24-144)||(2533293-2533413)
chr8 (24-144)||(3875929-3876049)
chr8 (24-144)||(37933663-37933783)
chr8 (24-144)||(38107120-38107240)
chr8 (27-144)||(513332-513448)
chr8 (24-144)||(259999-260118)
chr8 (24-144)||(655803-655922)
chr8 (24-144)||(841538-841657)
chr8 (24-144)||(41536527-41536647)
chr8 (14-144)||(28496355-28496484)
chr8 (20-144)||(440857-440981)
chr8 (24-144)||(1293507-1293627)
chr8 (24-144)||(9056338-9056458)
chr8 (24-144)||(22683988-22684108)
chr8 (24-144)||(23972295-23972415)
chr8 (24-144)||(36400070-36400190)
chr8 (20-144)||(38633710-38633834)
chr8 (21-139)||(39513344-39513462)
chr8 (20-144)||(38208769-38208894)
chr8 (24-144)||(28707446-28707566)
chr8 (20-144)||(12010566-12010693)
chr8 (27-123)||(7434910-7435006)
chr8 (24-144)||(33651862-33651982)
chr8 (20-123)||(23935250-23935353)
chr8 (14-123)||(29485298-29485406)
chr8 (20-144)||(4649167-4649291)
chr8 (24-144)||(24430571-24430691)
chr8 (24-144)||(40301893-40302013)
chr8 (28-144)||(13797114-13797229)
chr8 (20-144)||(36218781-36218904)
chr8 (24-144)||(42988227-42988346)
chr8 (79-143)||(24193131-24193195)
chr8 (24-123)||(6016226-6016325)
chr8 (24-81)||(24193356-24193412)
chr8 (20-68)||(8137191-8137239)
chr8 (210-242)||(8137338-8137370)
chr8 (210-240)||(43468907-43468937)
chr8 (210-239)||(5720426-5720455)
chr8 (210-239)||(15846954-15846983)
chr8 (210-239)||(24430868-24430897)
chr8 (210-243)||(33651653-33651686)
chr8 (210-239)||(35443518-35443547)
chr8 (210-242)||(260184-260216)
chr8 (210-242)||(655705-655737)
chr8 (210-242)||(841440-841472)
chr8 (210-242)||(9056663-9056695)
chr8 (210-238)||(9884673-9884701)
chr8 (210-238)||(24430477-24430505)
chr8 (210-238)||(33652048-33652076)
chr8 (210-238)||(41536433-41536461)
[»] chr1 (76 HSPs)
chr1 (24-144)||(12143093-12143213)
chr1 (25-144)||(49094711-49094830)
chr1 (24-144)||(7553016-7553136)
chr1 (24-144)||(23767414-23767534)
chr1 (24-144)||(38473626-38473746)
chr1 (24-144)||(41106037-41106157)
chr1 (24-144)||(46825552-46825672)
chr1 (24-143)||(19274580-19274699)
chr1 (14-144)||(50689954-50690084)
chr1 (24-144)||(19315661-19315781)
chr1 (24-144)||(25988271-25988391)
chr1 (24-144)||(28425363-28425483)
chr1 (20-144)||(33674034-33674158)
chr1 (20-144)||(46051467-46051591)
chr1 (14-141)||(24204474-24204601)
chr1 (24-143)||(50533404-50533523)
chr1 (23-144)||(16705890-16706011)
chr1 (24-144)||(45350717-45350835)
chr1 (24-144)||(7651683-7651803)
chr1 (24-144)||(26549409-26549529)
chr1 (24-144)||(33325748-33325868)
chr1 (24-144)||(36157678-36157797)
chr1 (20-144)||(36781172-36781296)
chr1 (24-144)||(48669396-48669516)
chr1 (24-144)||(49814321-49814441)
chr1 (24-144)||(5400891-5401011)
chr1 (24-144)||(9962772-9962892)
chr1 (20-144)||(21965082-21965206)
chr1 (24-144)||(23228194-23228314)
chr1 (20-144)||(37216913-37217037)
chr1 (24-142)||(41982237-41982355)
chr1 (14-144)||(43396686-43396816)
chr1 (24-144)||(45670486-45670606)
chr1 (24-144)||(9878784-9878904)
chr1 (24-144)||(26069913-26070033)
chr1 (20-144)||(34971097-34971221)
chr1 (24-144)||(7608766-7608886)
chr1 (28-144)||(18892354-18892470)
chr1 (24-144)||(48802331-48802451)
chr1 (30-144)||(6711467-6711581)
chr1 (30-144)||(46095075-46095189)
chr1 (22-123)||(33194672-33194773)
chr1 (24-144)||(8141486-8141606)
chr1 (24-144)||(17983898-17984018)
chr1 (24-144)||(52349924-52350044)
chr1 (29-144)||(21929545-21929667)
chr1 (24-144)||(52147014-52147134)
chr1 (24-107)||(12964667-12964750)
chr1 (20-143)||(18917541-18917664)
chr1 (25-123)||(48319067-48319165)
chr1 (23-124)||(9974862-9974963)
chr1 (20-144)||(18782089-18782213)
chr1 (24-144)||(33714361-33714479)
chr1 (28-144)||(52067651-52067767)
chr1 (20-123)||(16506809-16506912)
chr1 (24-144)||(40721363-40721484)
chr1 (24-123)||(30281652-30281751)
chr1 (24-144)||(25800665-25800782)
chr1 (43-144)||(44978768-44978868)
chr1 (24-81)||(50099241-50099298)
chr1 (210-244)||(48802231-48802265)
chr1 (210-242)||(26549201-26549233)
chr1 (210-242)||(37217103-37217135)
chr1 (210-240)||(36157973-36158003)
chr1 (210-239)||(6711678-6711707)
chr1 (210-239)||(16508195-16508224)
chr1 (210-239)||(19274765-19274794)
chr1 (211-244)||(21929333-21929366)
chr1 (210-238)||(24204377-24204405)
chr1 (210-238)||(25800848-25800876)
chr1 (210-238)||(28425269-28425297)
chr1 (210-238)||(34971275-34971303)
chr1 (210-242)||(46051292-46051324)
chr1 (210-238)||(46051657-46051685)
chr1 (211-243)||(46095372-46095404)
chr1 (210-238)||(49594868-49594896)
[»] chr7 (60 HSPs)
chr7 (14-144)||(47271992-47272122)
chr7 (20-144)||(2960640-2960764)
chr7 (24-144)||(47281124-47281244)
chr7 (22-144)||(11476556-11476678)
chr7 (14-144)||(30798368-30798498)
chr7 (24-144)||(1469493-1469613)
chr7 (20-144)||(31684134-31684258)
chr7 (20-139)||(4923233-4923352)
chr7 (21-144)||(23842323-23842446)
chr7 (13-144)||(41113387-41113518)
chr7 (24-143)||(44544430-44544549)
chr7 (28-144)||(27364339-27364455)
chr7 (24-144)||(38427563-38427683)
chr7 (24-143)||(47219166-47219285)
chr7 (26-144)||(221298-221416)
chr7 (24-144)||(8162712-8162832)
chr7 (24-144)||(35600122-35600242)
chr7 (24-144)||(47294291-47294411)
chr7 (24-143)||(33884340-33884459)
chr7 (26-144)||(40851297-40851415)
chr7 (23-144)||(11050261-11050382)
chr7 (24-144)||(37393998-37394118)
chr7 (24-144)||(48628826-48628946)
chr7 (24-144)||(30876280-30876400)
chr7 (24-144)||(30971941-30972061)
chr7 (24-144)||(42979338-42979458)
chr7 (24-144)||(44800410-44800530)
chr7 (20-143)||(29248359-29248482)
chr7 (26-144)||(43752776-43752894)
chr7 (24-144)||(7336081-7336200)
chr7 (24-144)||(41139408-41139532)
chr7 (24-144)||(43968259-43968379)
chr7 (24-144)||(45723491-45723611)
chr7 (24-123)||(3797544-3797643)
chr7 (20-123)||(37354284-37354387)
chr7 (24-144)||(47120012-47120134)
chr7 (24-144)||(18353165-18353285)
chr7 (20-123)||(27774125-27774228)
chr7 (28-144)||(47579086-47579203)
chr7 (20-96)||(40520935-40521011)
chr7 (91-144)||(42888937-42888990)
chr7 (210-244)||(11476456-11476490)
chr7 (88-144)||(5106127-5106182)
chr7 (24-63)||(39034083-39034122)
chr7 (210-241)||(47218959-47218990)
chr7 (210-239)||(31684401-31684430)
chr7 (210-239)||(39033877-39033906)
chr7 (210-239)||(43968555-43968584)
chr7 (210-239)||(47281422-47281451)
chr7 (210-239)||(48629012-48629041)
chr7 (210-238)||(2960546-2960574)
chr7 (210-238)||(11476852-11476880)
chr7 (210-242)||(25801468-25801500)
chr7 (210-238)||(27772982-27773010)
chr7 (210-238)||(31684040-31684068)
chr7 (210-242)||(37393899-37393931)
chr7 (210-238)||(45723397-45723425)
chr7 (210-238)||(47119837-47119865)
chr7 (210-238)||(47294197-47294225)
chr7 (210-242)||(47294558-47294590)
[»] chr5 (64 HSPs)
chr5 (24-144)||(6739955-6740075)
chr5 (20-144)||(11000728-11000852)
chr5 (24-144)||(14717626-14717746)
chr5 (20-144)||(27457197-27457321)
chr5 (23-144)||(6600136-6600257)
chr5 (24-144)||(3352002-3352122)
chr5 (20-144)||(8689589-8689713)
chr5 (20-144)||(14952341-14952465)
chr5 (24-144)||(33760470-33760590)
chr5 (24-144)||(4015874-4015994)
chr5 (28-144)||(8215925-8216041)
chr5 (24-144)||(20079258-20079378)
chr5 (24-144)||(30297749-30297869)
chr5 (24-144)||(31710303-31710423)
chr5 (24-144)||(39002025-39002145)
chr5 (24-144)||(39824577-39824697)
chr5 (24-144)||(40074971-40075091)
chr5 (24-143)||(41282363-41282482)
chr5 (23-144)||(42993538-42993659)
chr5 (20-144)||(1052550-1052674)
chr5 (24-144)||(6251993-6252113)
chr5 (28-144)||(16095960-16096075)
chr5 (20-144)||(20408550-20408674)
chr5 (24-144)||(38964114-38964233)
chr5 (24-143)||(30863274-30863393)
chr5 (14-144)||(43166269-43166399)
chr5 (24-144)||(19659501-19659621)
chr5 (24-144)||(23128913-23129033)
chr5 (24-144)||(26593280-26593400)
chr5 (24-144)||(35342201-35342321)
chr5 (25-144)||(11692147-11692266)
chr5 (24-144)||(30208402-30208522)
chr5 (25-144)||(27116099-27116218)
chr5 (40-144)||(28078405-28078509)
chr5 (25-144)||(11935468-11935586)
chr5 (24-123)||(16752137-16752236)
chr5 (28-144)||(19398193-19398309)
chr5 (24-105)||(6331398-6331479)
chr5 (26-123)||(26035367-26035464)
chr5 (24-144)||(8694887-8695007)
chr5 (20-123)||(444971-445074)
chr5 (70-144)||(27510038-27510112)
chr5 (210-244)||(26035266-26035300)
chr5 (210-247)||(14717813-14717850)
chr5 (100-144)||(6332873-6332917)
chr5 (210-240)||(4016169-4016199)
chr5 (210-240)||(6600432-6600462)
chr5 (210-240)||(20408740-20408770)
chr5 (210-240)||(38964018-38964048)
chr5 (210-243)||(445141-445174)
chr5 (210-239)||(8215716-8215745)
chr5 (210-239)||(11935293-11935322)
chr5 (210-239)||(14717420-14717449)
chr5 (210-239)||(17002452-17002481)
chr5 (210-239)||(35861501-35861530)
chr5 (211-239)||(3352298-3352326)
chr5 (210-238)||(6252179-6252207)
chr5 (210-238)||(11001024-11001052)
chr5 (211-239)||(16751961-16751989)
chr5 (210-238)||(19659407-19659435)
chr5 (210-238)||(26593576-26593604)
chr5 (24-52)||(27509999-27510027)
chr5 (210-242)||(28078307-28078339)
chr5 (210-238)||(33003248-33003276)
[»] chr4 (77 HSPs)
chr4 (24-144)||(23135006-23135126)
chr4 (20-144)||(24458631-24458755)
chr4 (24-144)||(26017444-26017564)
chr4 (24-144)||(4544985-4545105)
chr4 (20-144)||(31973608-31973732)
chr4 (24-144)||(42273823-42273943)
chr4 (24-144)||(28264664-28264784)
chr4 (20-144)||(28812287-28812410)
chr4 (20-144)||(30467003-30467127)
chr4 (24-144)||(32317974-32318094)
chr4 (24-144)||(33807780-33807900)
chr4 (20-144)||(39995167-39995291)
chr4 (24-144)||(49118632-49118752)
chr4 (24-143)||(40988654-40988773)
chr4 (238-340)||(20818874-20818976)
chr4 (27-144)||(31591100-31591216)
chr4 (24-144)||(12196490-12196610)
chr4 (20-144)||(17847096-17847219)
chr4 (24-144)||(19496102-19496222)
chr4 (24-144)||(35930060-35930180)
chr4 (24-144)||(44490340-44490460)
chr4 (24-144)||(48149520-48149640)
chr4 (24-144)||(48707733-48707853)
chr4 (24-144)||(55517185-55517305)
chr4 (23-142)||(10588600-10588719)
chr4 (14-144)||(30141108-30141238)
chr4 (15-144)||(33693333-33693462)
chr4 (24-144)||(2055299-2055419)
chr4 (24-144)||(5227411-5227531)
chr4 (24-144)||(8882013-8882133)
chr4 (24-144)||(11795154-11795274)
chr4 (20-144)||(14564813-14564937)
chr4 (24-144)||(25734223-25734343)
chr4 (24-144)||(28159953-28160073)
chr4 (20-144)||(48551764-48551888)
chr4 (24-143)||(32118735-32118854)
chr4 (24-143)||(33174021-33174140)
chr4 (20-144)||(50276138-50276259)
chr4 (24-144)||(9339123-9339246)
chr4 (35-144)||(31208776-31208885)
chr4 (24-144)||(15985031-15985151)
chr4 (24-144)||(39700066-39700186)
chr4 (20-144)||(51371047-51371171)
chr4 (23-144)||(50542354-50542475)
chr4 (24-144)||(17993017-17993137)
chr4 (24-144)||(23553086-23553205)
chr4 (20-144)||(25730257-25730381)
chr4 (24-143)||(37381867-37381986)
chr4 (31-144)||(22298546-22298659)
chr4 (24-123)||(24623169-24623268)
chr4 (24-123)||(19168816-19168915)
chr4 (24-123)||(42549643-42549742)
chr4 (406-501)||(20819042-20819137)
chr4 (63-144)||(20534225-20534306)
chr4 (24-84)||(56555200-56555260)
chr4 (109-144)||(56555165-56555200)
chr4 (210-243)||(19496442-19496475)
chr4 (210-243)||(22298331-22298364)
chr4 (210-242)||(17847420-17847452)
chr4 (210-242)||(26017265-26017297)
chr4 (210-246)||(42273640-42273676)
chr4 (210-241)||(2055099-2055130)
chr4 (210-240)||(19169062-19169092)
chr4 (210-240)||(50276431-50276461)
chr4 (210-239)||(5227597-5227626)
chr4 (210-239)||(28160251-28160280)
chr4 (210-239)||(28264850-28264879)
chr4 (210-239)||(30141373-30141402)
chr4 (211-239)||(8882311-8882339)
chr4 (210-238)||(17847003-17847031)
chr4 (210-238)||(28264489-28264517)
chr4 (210-242)||(28812189-28812221)
chr4 (210-238)||(33173926-33173954)
chr4 (210-238)||(36444588-36444616)
chr4 (210-250)||(37381651-37381691)
chr4 (210-238)||(51371372-51371400)
chr4 (210-238)||(56555440-56555468)
[»] chr3 (79 HSPs)
chr3 (24-144)||(33151717-33151837)
chr3 (14-144)||(42016884-42017014)
chr3 (24-144)||(1687672-1687792)
chr3 (20-144)||(21564513-21564637)
chr3 (24-144)||(38446497-38446617)
chr3 (23-144)||(20086314-20086435)
chr3 (24-144)||(1017065-1017185)
chr3 (24-144)||(21656539-21656659)
chr3 (24-144)||(21890191-21890311)
chr3 (20-144)||(31122679-31122803)
chr3 (24-144)||(35346471-35346591)
chr3 (24-144)||(42107099-42107219)
chr3 (20-144)||(53196031-53196155)
chr3 (13-144)||(37247966-37248097)
chr3 (23-144)||(40922165-40922286)
chr3 (24-144)||(20760071-20760191)
chr3 (24-144)||(20813441-20813561)
chr3 (20-144)||(32650820-32650944)
chr3 (20-144)||(41250903-41251027)
chr3 (20-144)||(47329175-47329299)
chr3 (24-144)||(51562183-51562303)
chr3 (20-144)||(3697163-3697287)
chr3 (24-144)||(10618480-10618600)
chr3 (20-136)||(12748408-12748524)
chr3 (24-144)||(26455603-26455723)
chr3 (24-144)||(36314972-36315092)
chr3 (24-144)||(50287587-50287707)
chr3 (22-144)||(20913754-20913876)
chr3 (22-144)||(20921872-20921994)
chr3 (24-144)||(44798289-44798408)
chr3 (20-144)||(48651265-48651389)
chr3 (24-139)||(19664562-19664677)
chr3 (24-143)||(29677497-29677616)
chr3 (25-144)||(52821049-52821168)
chr3 (20-144)||(1448735-1448856)
chr3 (24-138)||(22852017-22852131)
chr3 (32-144)||(27070739-27070851)
chr3 (24-144)||(35608131-35608251)
chr3 (24-144)||(19268542-19268668)
chr3 (24-144)||(55164115-55164235)
chr3 (20-123)||(50364908-50365011)
chr3 (24-144)||(53925979-53926099)
chr3 (24-144)||(33473239-33473359)
chr3 (20-144)||(39069743-39069867)
chr3 (24-123)||(50977885-50977984)
chr3 (24-123)||(51081017-51081116)
chr3 (24-123)||(51475267-51475366)
chr3 (23-144)||(45380260-45380381)
chr3 (24-144)||(38923998-38924118)
chr3 (20-103)||(28699702-28699785)
chr3 (24-123)||(34019481-34019580)
chr3 (34-109)||(42641213-42641288)
chr3 (24-80)||(44152721-44152777)
chr3 (24-67)||(47473251-47473294)
chr3 (102-144)||(44152772-44152814)
chr3 (210-243)||(20760367-20760400)
chr3 (211-244)||(20813738-20813771)
chr3 (210-246)||(52821357-52821393)
chr3 (210-241)||(1687858-1687889)
chr3 (210-241)||(21564339-21564370)
chr3 (210-241)||(33151932-33151963)
chr3 (210-244)||(20914051-20914085)
chr3 (210-244)||(20922169-20922203)
chr3 (211-241)||(31122870-31122900)
chr3 (210-239)||(19664357-19664386)
chr3 (210-239)||(21656725-21656754)
chr3 (210-243)||(29677683-29677716)
chr3 (210-243)||(48651060-48651093)
chr3 (210-239)||(50287382-50287411)
chr3 (210-238)||(1016890-1016918)
chr3 (210-238)||(1448641-1448669)
chr3 (210-242)||(1448999-1449031)
chr3 (210-238)||(8097228-8097256)
chr3 (210-238)||(36315268-36315296)
chr3 (210-238)||(38446294-38446322)
chr3 (210-238)||(44152517-44152545)
chr3 (210-238)||(44152880-44152908)
chr3 (210-242)||(47329470-47329502)
chr3 (210-238)||(49799017-49799045)
[»] chr2 (61 HSPs)
chr2 (24-144)||(16246193-16246313)
chr2 (20-138)||(771981-772099)
chr2 (14-143)||(17134240-17134369)
chr2 (24-144)||(27328605-27328725)
chr2 (24-144)||(28650426-28650546)
chr2 (24-144)||(33865267-33865387)
chr2 (20-144)||(41500502-41500626)
chr2 (23-144)||(2056946-2057067)
chr2 (24-144)||(921043-921163)
chr2 (24-144)||(33106969-33107089)
chr2 (24-144)||(37838318-37838438)
chr2 (24-144)||(40854630-40854750)
chr2 (20-137)||(3430631-3430748)
chr2 (24-144)||(11949426-11949546)
chr2 (24-144)||(34253163-34253283)
chr2 (20-139)||(36211063-36211182)
chr2 (20-143)||(36444229-36444352)
chr2 (23-144)||(2314975-2315096)
chr2 (24-144)||(1106559-1106679)
chr2 (24-144)||(2456031-2456151)
chr2 (24-144)||(7378984-7379104)
chr2 (24-144)||(9276595-9276715)
chr2 (23-144)||(8899702-8899822)
chr2 (23-144)||(17484550-17484671)
chr2 (20-144)||(2094410-2094534)
chr2 (24-144)||(7297234-7297354)
chr2 (24-144)||(12759750-12759869)
chr2 (24-144)||(19180443-19180562)
chr2 (24-144)||(25087796-25087916)
chr2 (24-144)||(42629983-42630103)
chr2 (24-144)||(43249412-43249532)
chr2 (24-143)||(38751069-38751188)
chr2 (13-119)||(37654118-37654224)
chr2 (30-144)||(37732193-37732307)
chr2 (24-144)||(29737769-29737889)
chr2 (52-144)||(14630663-14630755)
chr2 (24-144)||(45124140-45124260)
chr2 (24-123)||(8396572-8396671)
chr2 (23-104)||(41178059-41178140)
chr2 (54-144)||(23671811-23671901)
chr2 (27-123)||(19916008-19916104)
chr2 (24-144)||(9331777-9331897)
chr2 (24-59)||(23672958-23672993)
chr2 (210-243)||(28650327-28650360)
chr2 (210-246)||(27328791-27328827)
chr2 (105-144)||(28216964-28217003)
chr2 (210-244)||(920833-920867)
chr2 (210-244)||(37732093-37732127)
chr2 (210-239)||(2057132-2057161)
chr2 (210-251)||(19180628-19180669)
chr2 (210-239)||(23671717-23671746)
chr2 (210-239)||(37654301-37654330)
chr2 (210-247)||(37838088-37838125)
chr2 (210-239)||(37838504-37838533)
chr2 (210-239)||(38750863-38750892)
chr2 (210-246)||(771874-771910)
chr2 (210-238)||(2094317-2094345)
chr2 (210-238)||(7297171-7297199)
chr2 (210-242)||(11949328-11949360)
chr2 (210-242)||(20248086-20248118)
chr2 (210-238)||(36211254-36211282)
[»] chr6 (33 HSPs)
chr6 (22-144)||(29050291-29050413)
chr6 (23-144)||(30379037-30379158)
chr6 (20-144)||(2707476-2707600)
chr6 (20-144)||(10256254-10256378)
chr6 (24-144)||(17428272-17428392)
chr6 (24-143)||(6503739-6503858)
chr6 (24-144)||(2390286-2390406)
chr6 (20-144)||(8178249-8178373)
chr6 (20-144)||(12626653-12626777)
chr6 (24-144)||(1915343-1915463)
chr6 (20-144)||(2598099-2598223)
chr6 (24-144)||(3408210-3408330)
chr6 (24-144)||(9382540-9382660)
chr6 (24-144)||(17943057-17943177)
chr6 (24-144)||(26230932-26231052)
chr6 (20-144)||(16193327-16193451)
chr6 (24-144)||(26393009-26393129)
chr6 (20-144)||(1077254-1077378)
chr6 (29-144)||(11133899-11134015)
chr6 (24-144)||(3258807-3258927)
chr6 (24-144)||(6785101-6785218)
chr6 (24-124)||(35223919-35224019)
chr6 (24-144)||(26196321-26196441)
chr6 (24-123)||(26936628-26936727)
chr6 (24-144)||(10931148-10931267)
chr6 (57-144)||(31375971-31376058)
chr6 (24-143)||(25820550-25820669)
chr6 (86-144)||(12612971-12613029)
chr6 (65-144)||(12612848-12612927)
chr6 (210-246)||(2597998-2598034)
chr6 (210-242)||(2707666-2707698)
chr6 (210-238)||(12626843-12626871)
chr6 (210-238)||(26393305-26393333)
[»] scaffold1986 (2 HSPs)
scaffold1986 (24-144)||(135-255)
scaffold1986 (210-238)||(293-321)
[»] scaffold0004 (1 HSPs)
scaffold0004 (24-144)||(218906-219027)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-144)||(252438-252562)
[»] scaffold0096 (1 HSPs)
scaffold0096 (24-144)||(47983-48103)
[»] scaffold0184 (1 HSPs)
scaffold0184 (14-144)||(13106-13236)
[»] scaffold0078 (1 HSPs)
scaffold0078 (14-144)||(59608-59738)
[»] scaffold0693 (1 HSPs)
scaffold0693 (24-144)||(5027-5147)
[»] scaffold0727 (1 HSPs)
scaffold0727 (24-144)||(5207-5326)
[»] scaffold0122 (1 HSPs)
scaffold0122 (23-143)||(11378-11498)
[»] scaffold0542 (1 HSPs)
scaffold0542 (24-123)||(1994-2093)
[»] scaffold1562 (1 HSPs)
scaffold1562 (63-144)||(599-680)
[»] scaffold1158 (1 HSPs)
scaffold1158 (63-144)||(1913-1994)
[»] scaffold0952 (1 HSPs)
scaffold0952 (63-144)||(3371-3452)
[»] scaffold0717 (1 HSPs)
scaffold0717 (63-144)||(1877-1958)
[»] scaffold0130 (1 HSPs)
scaffold0130 (24-53)||(19802-19831)
[»] scaffold0117 (1 HSPs)
scaffold0117 (210-239)||(14494-14523)
[»] scaffold0392 (1 HSPs)
scaffold0392 (24-56)||(289-321)


Alignment Details
Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 15847129 - 15847253
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  15847129 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 15847228  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  15847229 caataggacttgtttgaaacgattc 15847253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 35884554 - 35884430
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35884554 ttgccatgcctaaaaagatgactaattttaagtgggtgttacgagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatcta 35884455  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  35884454 caataagacttgtttgaaacgattc 35884430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 35443328 - 35443452
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  35443328 ttgccatgcctaaaaagataactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 35443427  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||| ||||||||||||||||||    
T  35443428 caatagaacttgtttgaaacgattc 35443452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 43806663 - 43806533
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||     
T  43806663 catcatttgccatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttagtaccaaagatgagttcaaggaagcaattaccaactatgc 43806564  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||| |||||||||||||||||||    
T  43806563 tatctacaatatgacttgtttgaaacgattc 43806533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 2533293 - 2533413
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  2533293 catgcctaaaaagatgactaattttaagtgggtgtttggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgatatctacaat 2533392  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  2533393 atgacttgtttgaaacgattc 2533413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 3875929 - 3876049
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3875929 catgcctaaaaagatgactaattttaagtgggtgttaggaaccagatatagtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 3876028  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  3876029 aggacttgtttgaaacgattc 3876049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 37933663 - 37933783
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||    
T  37933663 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacgat 37933762  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  37933763 aagacttgtttgaaacgattc 37933783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 38107120 - 38107240
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  38107120 catgcctaaaaagatgattaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 38107219  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  38107220 aagacttgtttgaaacgattc 38107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 513332 - 513448
Alignment:
Q  27 gcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagg 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  513332 gcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaatagg 513430  T
Q  127 acttgtttgaaacgattc 144  Q
    ||||||||||||||||||    
T  513431 acttgtttgaaacgattc 513448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 259999 - 260118
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  259999 catgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 260097  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  260098 atgacttgtttgaaacgattc 260118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 655922 - 655803
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  655922 catgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 655824  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  655823 atgacttgtttgaaacgattc 655803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 841657 - 841538
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  841657 catgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 841559  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  841558 atgacttgtttgaaacgattc 841538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 41536647 - 41536527
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||||||| ||||||||||    
T  41536647 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagataaattcaaggaagcaattaccaactatgctatctacaat 41536548  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  41536547 aggacttgtttgaaacgattc 41536527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 28496484 - 28496355
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  28496484 catcatttgtcatgcctaaaaagatgactaattttaagtgggtattagaa-ctagatttggtaccaaagatgagttcaaggaagcaattaccaactatgt 28496386  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||||||||    
T  28496385 tatctacaataggacttgtttgaaacgattc 28496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 440857 - 440981
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||| ||    
T  440857 ttgccatgtctaaaaagatgagtaattttaagtgggtgttaggagccagatttggtacgaaaaatgagttcaaggaagcaattaccaactatgctatata 440956  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  440957 caataggacttgtttgaaacgattc 440981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 1293507 - 1293627
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||     
T  1293507 catgcctaaaaagatgactaattttaagtgggtgttagaaaccagatttgataccaaagatgagttcaaggaagcaattaccaactatgttatctacaac 1293606  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  1293607 atgacttgtttgaaacgattc 1293627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 9056458 - 9056338
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||    
T  9056458 catgcctaaaaagatgactaattttaagtggatgttaggagtcagatttggtatcaaagatgagttcaaagaagcaattaccaactatgttatctacaat 9056359  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  9056358 aggacttgtttgaaacaattc 9056338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 22684108 - 22683988
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  22684108 catggctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaaacaattaccaactatgatatctacaat 22684009  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | ||||||||||||| |||||    
T  22684008 atgacttgtttgaaatgattc 22683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 23972415 - 23972295
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  23972415 catgtctaaaaagatgactaattttaagtgggtgataggagtcagatttggtaccaaaaatgagttcaaggaagcaattaccaactatgttatctacaat 23972316  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  23972315 atgacttgtttgaaacgattc 23972295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 36400190 - 36400070
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  36400190 catgcctaaaaagatgactaagtttaagtgggtgttagaaggcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 36400091  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  36400090 atgacttgtttgaaacgattc 36400070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 38633834 - 38633710
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  38633834 ttgccatgcctaaaaagatgactaattttaagtgggtgttagaaatcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 38633735  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    || ||| ||||||||||||||||||    
T  38633734 cattagaacttgtttgaaacgattc 38633710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 39513462 - 39513344
Alignment:
Q  21 tgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctac 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  39513462 tgccatgcctaaaaagatgactaattttaagtgggtgttaggagttagatttggtaccaaagatgagttcaagaaagcaattaccaactatgttatctac 39513363  T
Q  121 aataggacttgtttgaaac 139  Q
    | |||||||| ||||||||    
T  39513362 attaggacttatttgaaac 39513344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 38208769 - 38208894
Alignment:
Q  20 ttgccatgcctaaaaag-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatct 118  Q
    |||||||| |||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  38208769 ttgccatgtctaaaatggatgactaattttaagtgggtgttaggagccagatttggtagcaaagatgagttcaaagaagcaattaccaactatgttatct 38208868  T
Q  119 acaataggacttgtttgaaacgattc 144  Q
    |||||| |||||||||||||||||||    
T  38208869 acaatatgacttgtttgaaacgattc 38208894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 28707566 - 28707446
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  28707566 catgccttaaaagatgactaattttaagtgggtgttatgagccagatttggtatcaaagatgagttcaaggaagcaattaccaattatgatatctacaat 28707467  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||| ||||||||||||||||    
T  28707466 aggatttgtttgaaacgattc 28707446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 12010566 - 12010693
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttat--- 116  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||| |||       
T  12010566 ttgccatgcataaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggcaacaattaccaactatgctatcta 12010665  T
Q  117 ctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||| ||||    
T  12010666 ctacaataggacttgtttgaaacaattc 12010693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 7434910 - 7435006
Alignment:
Q  27 gcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7434910 gcctataaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 7435006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 33651862 - 33651982
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||  |||||| ||||||| ||||||| ||    
T  33651862 catgtctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtatgaaagatgagttcaaggaaacaattacaaactatgctatctacgat 33651961  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  33651962 aggacttgtttgaaacgattc 33651982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 23935250 - 23935353
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| ||||||    
T  23935250 ttgccatgcctaaaaagatgactgattttaagtgggtgttaggagccagatttggtactaaagatgagttcaaggaagcaattatcaactatgctatcta 23935349  T
Q  120 caat 123  Q
    ||||    
T  23935350 caat 23935353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 29485298 - 29485406
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  29485298 catcatttgccatgcctaaaaa-atgactgattttaagtgggtgttaggagttagatttggtaccaaagatgagttcaaggaagcaattaccaactatgt 29485396  T
Q  114 tatctacaat 123  Q
    ||||||||||    
T  29485397 tatctacaat 29485406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 4649167 - 4649291
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||| |||||||||||||||||| |||| | || |||||||||||||||||| ||||||||||||  ||||||||| |||| ||||||    
T  4649167 ttgccatgcctaaaaaaatgactaattttaagtggatgttggaagtcagatttggtaccaaagacgagttcaaggaaacaattaccaattatgctatcta 4649266  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||| ||||||||||||||||||||    
T  4649267 caattggacttgtttgaaacgattc 4649291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 24430691 - 24430571
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||  ||  ||||| |||||||  ||||||||||    
T  24430691 catgcctaaaaagatgactaattttaagtgggtgttagtagtgagatttggtaccaaagatgagttcaataaaacaattatcaactatactatctacaat 24430592  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  24430591 aggacttgtttgaaacgattc 24430571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 40302013 - 40301893
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||| | ||||| |||| |||||||||||||| ||||||||||    
T  40302013 catgcctaaaaagatgattaattttaagtgagtgttaggagctagatttggtaccaaagataaattcaatgaagcaattaccaactatgctatctacaat 40301914  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | ||||| |||||||||||||    
T  40301913 atgacttttttgaaacgattc 40301893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 13797114 - 13797229
Alignment:
Q  28 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagga 127  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||| ||| ||||||||||    
T  13797114 cctaaaaagatgactaattttatgtggatgttaggagccagatttgataccaaa-atgagttcaaagaagcaattaccaactatgctatatacaatagga 13797212  T
Q  128 cttgtttgaaacgattc 144  Q
     ||||||||||||||||    
T  13797213 tttgtttgaaacgattc 13797229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 36218904 - 36218781
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||    
T  36218904 ttgccatgcctaaaaagatggctaattttaagtgggtgctagaagtcagatttggtaccaaagatgagttcaa-gaagcaattatcaactatattatcta 36218806  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||  | |||||||||||||||||||    
T  36218805 catcatgacttgtttgaaacgattc 36218781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 42988346 - 42988227
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| || |||| || |||| ||||| ||||||| |||||||||||    
T  42988346 catgcctaaaaagatgactaattttaagtgggtgttaggagttagatttggtaccaaatataagttaaatgaagcaattatcaactatattatctacaat 42988247  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||| |||||||||||||    
T  42988246 aggactt-tttgaaacgattc 42988227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 24193195 - 24193131
Alignment:
Q  79 aaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgatt 143  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24193195 aaagatgagttcaaggaagcaattaccaactatgttatctacaataggacttgtttgaaacgatt 24193131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 6016226 - 6016325
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| |||  ||| |||||||||||| || |||| |||||||||||||| ||||||||||    
T  6016226 catgcctaaaaagatgactgattttaagtggatgttaggagccaaattgagtatcaaagatgagtttaaagaagcaattaccaactatgctatctacaat 6016325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 24193412 - 24193356
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaa 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24193412 catgcctaaaaagatgactaattttaagt-ggtgttaggagccagatttggtaccaaa 24193356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 8137191 - 8137239
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccag 68  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  8137191 ttgctatgcctaaaaaaatgactaattttaagtaggtgttaggagccag 8137239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 8137338 - 8137370
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||||||||    
T  8137338 cttaaaggacctttagatgcatttgacctaaaa 8137370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 43468937 - 43468907
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaa 240  Q
    |||||||||||||||||||||||||||||||    
T  43468937 cttaaaggacctttagatgcatttgacctaa 43468907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 5720455 - 5720426
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  5720455 cttaaaggacctttagatgcatttgaccta 5720426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 15846983 - 15846954
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  15846983 cttaaaggacctttagatgcatttgaccta 15846954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 24430868 - 24430897
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  24430868 cttaaaggacctttagatgcatttgaccta 24430897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 33651686 - 33651653
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaat 243  Q
    |||||||||| |||||||||||||||||||||||    
T  33651686 cttaaaggacttttagatgcatttgacctaaaat 33651653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 35443518 - 35443547
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  35443518 cttaaaggacctttagatgcatttgaccta 35443547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 260184 - 260216
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||| ||||||||||||||||||||||    
T  260184 cttaaaggacatttagatgcatttgacctaaaa 260216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 655737 - 655705
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||| ||||||||||||||||||||||    
T  655737 cttaaaggacatttagatgcatttgacctaaaa 655705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 841472 - 841440
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||| ||||||||||||||||||||||    
T  841472 cttaaaggacatttagatgcatttgacctaaaa 841440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 9056663 - 9056695
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||| ||||    
T  9056663 cttaaaggacctttagatgcatttgaccaaaaa 9056695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 9884701 - 9884673
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  9884701 cttaaaggacctttagatgcatttgacct 9884673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 24430505 - 24430477
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  24430505 cttaaaggacctttagatgcatttgacct 24430477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 33652048 - 33652076
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  33652048 cttaaaggacctttagatgcatttgacct 33652076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 41536461 - 41536433
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  41536461 cttaaaggacctttagatgcatttgacct 41536433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 12143093 - 12143213
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12143093 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 12143192  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  12143193 aggacttgtttgaaacgattc 12143213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 49094830 - 49094711
Alignment:
Q  25 atgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaata 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  49094830 atgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaata 49094731  T
Q  125 ggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||    
T  49094730 ggacttgtttgaaacgattc 49094711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 7553136 - 7553016
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7553136 catggctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 7553037  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  7553036 atgacttgtttgaaacgattc 7553016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 23767534 - 23767414
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  23767534 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 23767435  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  23767434 atgacttgtttgaaacgattc 23767414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 38473746 - 38473626
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  38473746 catgcctaaaaagatgactaattttaagtgggtgttaggaaccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgatatctacaat 38473647  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  38473646 aggacttgtttgaaacgattc 38473626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 41106037 - 41106157
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  41106037 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 41106136  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  41106137 aggacttgtttgaaacgattc 41106157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 46825552 - 46825672
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||    
T  46825552 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaattatgctatctacaat 46825651  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  46825652 aggacttgtttgaaacgattc 46825672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 19274580 - 19274699
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  19274580 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaattaccagctatgttatctacaat 19274679  T
Q  124 aggacttgtttgaaacgatt 143  Q
    ||||||||||||||||||||    
T  19274680 aggacttgtttgaaacgatt 19274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 50689954 - 50690084
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  50689954 catcatttgctatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaatgaagcaattaccaactatgt 50690053  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||| |||||||||||||||||||    
T  50690054 tatctacaatatgacttgtttgaaacgattc 50690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 19315661 - 19315781
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  19315661 catgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 19315760  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  19315761 atgacttgtttgaaacgattc 19315781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 25988391 - 25988271
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  25988391 catgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaaccaattaccaactatgctatctacaat 25988292  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  25988291 aggacttgtttgaaacgattc 25988271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 28425483 - 28425363
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  28425483 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctgcaat 28425384  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  28425383 aggacttgtttgaaacgattc 28425363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 33674034 - 33674158
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||    
T  33674034 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtacgaaagatgagttcaaggaagcaattaccagctatgctatcta 33674133  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||| |||||||    
T  33674134 caataggacttgtttgacacgattc 33674158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 46051467 - 46051591
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  46051467 ttgccatgcctaaaaagatgactagttttaagtgggtgttaggaaccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 46051566  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||| |||||||||||||||||||||    
T  46051567 caacaggacttgtttgaaacgattc 46051591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 24204601 - 24204474
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||     
T  24204601 catcatttgccatgcctaaaaagatgactcattttaagtgggtattaggagccagatttggtaccaaagacgagttcaaggaagcaattaccaactatgc 24204502  T
Q  114 tatctacaataggacttgtttgaaacga 141  Q
    ||||||||||||||||||||||||||||    
T  24204501 tatctacaataggacttgtttgaaacga 24204474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 50533404 - 50533523
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| |||    
T  50533404 catgcctaaaaagatgactaattttaagtgggtgttaggagccagattcggtaccaaagatgagttcaatgaagcaattaccaactatgttatctataat 50533503  T
Q  124 aggacttgtttgaaacgatt 143  Q
    ||||||||||||||||||||    
T  50533504 aggacttgtttgaaacgatt 50533523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 16705890 - 16706011
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  16705890 ccatgcctaaaaagatgactaattttaagtgggttttaggcgccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctaaaa 16705989  T
Q  123 taggacttgtttgaaacgattc 144  Q
    || |||||||||||||||||||    
T  16705990 taagacttgtttgaaacgattc 16706011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 45350835 - 45350717
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  45350835 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagatcaaggaagcaattaccaactatgttatctacaat 45350736  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||  ||||||||||||||||    
T  45350735 agg--ttgtttgaaacgattc 45350717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 7651683 - 7651803
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||    
T  7651683 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaatgaagcaattatcaactatgctatctacaat 7651782  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  7651783 atgacttgtttgaaacgattc 7651803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 26549409 - 26549529
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  26549409 catgcctaaaaagatgactaattttaagtgggtgttaggaaccagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatctacaat 26549508  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||||||| |||||||||    
T  26549509 aggacttgtttaaaacgattc 26549529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 33325748 - 33325868
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33325748 catgcctaaaaagatgactaattttaagtgggtcttagaagccagatttgataccaaagatgagtttaaggaagcaattaccaactatgttatctacaat 33325847  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  33325848 aggacttgtttgaaacgattc 33325868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 36157797 - 36157678
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||    
T  36157797 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt-ccaattatgctatctacaat 36157699  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  36157698 aggacttgtttgaaacgattc 36157678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 36781296 - 36781172
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  36781296 ttgccatgcccaaaaagacgactaattttaagtgggtgttaggaaccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgatatcta 36781197  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  36781196 caataagacttgtttgaaacgattc 36781172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 48669516 - 48669396
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  48669516 catgcctaaaaagatgactaattttaagtggatgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatcaccaactatgctatctacaat 48669417  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  48669416 aggacttgtttgaaacgattc 48669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 49814321 - 49814441
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||    
T  49814321 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctagaat 49814420  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | ||||| |||||||||||||    
T  49814421 atgacttatttgaaacgattc 49814441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 5400891 - 5401011
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  5400891 catgcctaaaaagatgactaattttaagtggatgttagaaaccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 5400990  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||||||||||| |||||    
T  5400991 aggacttgtttgaaaagattc 5401011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 9962772 - 9962892
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||     
T  9962772 catgcctaaaaagatgactaattttaagtgggtgttaggaactagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaac 9962871  T
Q  124 aggacttgtttgaaacgattc 144  Q
    || ||||||||||||||||||    
T  9962872 agaacttgtttgaaacgattc 9962892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 21965082 - 21965206
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| || |||| ||||||||| ||||| |||||    
T  21965082 ttgccatgcctaaaaagatgactaattttaagtgggtgtaaggagtcagatttggtaccaaagatgagtttaatgaagcaattaccaattatgtcatcta 21965181  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  21965182 caataggacttgtttgaaacgattc 21965206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 23228314 - 23228194
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  23228314 catgcctaaaaagatgactaattttaaatggatgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 23228215  T
Q  124 aggacttgtttgaaacgattc 144  Q
    || ||||||||||||||||||    
T  23228214 agtacttgtttgaaacgattc 23228194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 37216913 - 37217037
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  37216913 ttgccatgtctaaaaagatgactaattttaagtgggtgttatgagctagagttggtaccaaagatgagttcaaggaaacaattaccaactatgctatcta 37217012  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  37217013 caataggacttgtttgaaacgattc 37217037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 41982355 - 41982237
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  41982355 catgcctaaaaatatgactaattttaaatgggtgttaggagtcagatttggtaccaaagatgagttcaaagaagtaattatcaactatgttatctacaat 41982256  T
Q  124 aggacttgtttgaaacgat 142  Q
    | |||||||||||||||||    
T  41982255 atgacttgtttgaaacgat 41982237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 43396686 - 43396816
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||     
T  43396686 catcatttgctatgcttaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattatcaactctgc 43396785  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    |||||||| ||||| ||||||||||||||||    
T  43396786 tatctacagtaggatttgtttgaaacgattc 43396816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 45670606 - 45670486
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattacc-aactatgttatctacaa 122  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  45670606 catgcctaaaaagatgactaattttaagtgg-tgttaggaatcagatttggtaccaaagatgagttcaaggaagcaattaccaaactatgttatctacaa 45670508  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||    
T  45670507 taggacttgtttgaaacgattc 45670486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 9878904 - 9878784
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  9878904 catgcctaaaaagatgactaattttaagtgggtgttaggaacccgatatggtactaaagatgagttcaaggaagcaattaccaactattttatctacaat 9878805  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  9878804 atgacttgtttgaaacgattc 9878784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 26069913 - 26070033
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||  |||||||||||||| ||||||||||    
T  26069913 catgcctaaaaagatgactaattttaagtgggtgttaggagccggatttgataccaaaaatgagttcaaggaaacaattaccaactatgatatctacaat 26070012  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  26070013 atgacttgtttgaaacgattc 26070033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 34971097 - 34971221
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||| |||  |||||||||||||||||||||    
T  34971097 ttgccatgcctaaaaagatgactaattttaagtgagtgttaggagtcagatttgataccaaatatgagttcaaagaaacaattaccaactatgttatcta 34971196  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    || ||||||||||||||||||||||    
T  34971197 cattaggacttgtttgaaacgattc 34971221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 7608886 - 7608766
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||| |||||||| |||||| |||    
T  7608886 catgcctaaaaacatgactaattttaagtgggtgttaggaggcagatttggtacaaaagatgagttcaaagaagcaattatcaactatgctatctataat 7608787  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  7608786 aggacttgtttgaaacgattc 7608766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 18892354 - 18892470
Alignment:
Q  28 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagga 127  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  18892354 cctaaaaggatgactaattttcagtgggtgttagaagccagatttggtatcaaagatgagttcaaagaagcaattaccaactatgctatctacaatagga 18892453  T
Q  128 cttgtttgaaacgattc 144  Q
    |||||||||||||||||    
T  18892454 cttgtttgaaacgattc 18892470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 48802451 - 48802331
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  48802451 catgcctacaaagatgactaattttaagtaggtgttaggagccatatttgataccaaagatgagttcaatgaagcaattaccaactatgctatctacaat 48802352  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  48802351 aagacttgtttgaaacgattc 48802331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 6711467 - 6711581
Alignment:
Q  30 taaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggact 129  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  | ||||||||| ||||    
T  6711467 taaaaagatggctaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaaggaagcaattaccaactataatgtctacaatatgact 6711566  T
Q  130 tgtttgaaacgattc 144  Q
    |||||||||||||||    
T  6711567 tgtttgaaacgattc 6711581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 46095189 - 46095075
Alignment:
Q  30 taaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggact 129  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| || |||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  46095189 taaaaagatgactaattttaagtggatgttaggagacagatttgatatcaaagatgagttcaaggaaacaattaccaactatgctatctacaataggact 46095090  T
Q  130 tgtttgaaacgattc 144  Q
    |||||||||||||||    
T  46095089 tgtttgaaacgattc 46095075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 33194773 - 33194672
Alignment:
Q  22 gccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctaca 121  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  33194773 gccatgcctaaaaagatgactgattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaactaccaactatgctatctaca 33194674  T
Q  122 at 123  Q
    ||    
T  33194673 at 33194672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 8141606 - 8141486
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||  || |||||||||||| |||||||||||||| |||| |||||| || |||| ||||||||||    
T  8141606 catgcctaaaaagatgactaattttaagtgggtgttacaagtcagatttggtactaaagatgagttcaaagaagcaattacaaattatgctatctacaat 8141507  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  8141506 aggacttgtttgaaacgattc 8141486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 17984018 - 17983898
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||| |    
T  17984018 catgcctaaaaagatgactaattttaagtgggtgttatgaatcagatttggtaccaaagatgagttcaaagaagcaattacaaactatgttatttacatt 17983919  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||| ||||||||||||    
T  17983918 aggacttggttgaaacgattc 17983898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 52350044 - 52349924
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| ||  ||||||||||| ||||||| |||||||||||||| ||| ||||||    
T  52350044 catgcctaaaaagatgactaattttaagtgggtgttaagagccaaatttgatagaaaagatgagtttaaggaagcaattaccaactatgctatttacaat 52349945  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  52349944 aggacttgtttgaaacgattc 52349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 21929545 - 21929667
Alignment:
Q  29 ctaaaaagatgactaattttaagtgggtgttaggagccagatttggtacc-------aaagatgagttcaaggaagtaattaccaactatgttatctaca 121  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||       ||||||||||||||||||| |||||||||||||| ||||||||    
T  21929545 ctaaaaagatgactaattttaagtgggttttaggagccagatttggtaccaaagatgaaagatgagttcaaggaagcaattaccaactatgctatctaca 21929644  T
Q  122 ataggacttgtttgaaacgattc 144  Q
    |||| ||||||||||||||||||    
T  21929645 atagaacttgtttgaaacgattc 21929667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 52147014 - 52147134
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||| ||||||| ||| |||||     
T  52147014 catgcctaaaaagatgaataattttaagtgggtgttaggaaccagatttgataccaaagatgagttcaatgaagcaattacaaactatgctatatacaac 52147113  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  52147114 atgacttgtttgaaacgattc 52147134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 12964667 - 12964750
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12964667 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaa 12964750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 18917541 - 18917664
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||||| |||||  || |||| ||||||    
T  18917541 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagtcatatttggtaccaaagataaattcaaggaagcaattattaaatatgctatcta 18917640  T
Q  120 caataggacttgtttgaaacgatt 143  Q
    ||||| || |||||||||||||||    
T  18917641 caatatgatttgtttgaaacgatt 18917664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 48319165 - 48319067
Alignment:
Q  25 atgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  48319165 atgcctaaaaagatgactgattttaagtgggtgttaggagccagatttagtaccaaagatgagttcaaggaagcaattaccaactatgctatatacaat 48319067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 9974862 - 9974963
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  9974862 ccatgcctaaaaagatgactaattttaagtgggtgttacgagccatatttagtaccaaaaatgagttcaaggaagcaattaccaactatgctatctacaa 9974961  T
Q  123 ta 124  Q
    ||    
T  9974962 ta 9974963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 18782213 - 18782089
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||| || || |||||||| |||||||||||||||||||  ||| ||||| |||||||| ||||||    
T  18782213 ttgccatgcctaaaaagatgactaattttaagtgggtgctatgaaccagattttgtaccaaagatgagttcaaataagcaattatcaactatgctatcta 18782114  T
Q  120 caataggacttgtttgaaacgattc 144  Q
     |||| ||||||||||||| |||||    
T  18782113 gaatatgacttgtttgaaatgattc 18782089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 33714479 - 33714361
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||    
T  33714479 catgcctaaaaagatgactaatgt-aagtgg-tgttaggagtcagatttggtatcaaagatgagttcaaggaaacaattatcaactatgttatctacaat 33714382  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||| ||||||||||||||||    
T  33714381 aggatttgtttgaaacgattc 33714361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 52067767 - 52067651
Alignment:
Q  28 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagga 127  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| || ||||  |||||||| | ||    
T  52067767 cctaaaaagatgaataattttaagtgggtgttaggagtcagatttggtaccaacgatgagttcaaggaagcaattacaaattatgccatctacaacatga 52067668  T
Q  128 cttgtttgaaacgattc 144  Q
    |||||||||||||||||    
T  52067667 cttgtttgaaacgattc 52067651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 16506912 - 16506809
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||||    
T  16506912 ttgccatgcttaaaaagatggctgattttaagtgggtgttaggagccagatttggtaccaaggttgagttcaaggaagcaattaccaactatgctatcta 16506813  T
Q  120 caat 123  Q
    ||||    
T  16506812 caat 16506809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 40721363 - 40721484
Alignment:
Q  24 catgcctaaaaagatgactaattttaagt-gggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||||| | |||||||| || |||| ||||||||||||||||||| |||||||||||||||| ||| ||||| |||||||| |||||||||    
T  40721363 catgcctaaaaagataattaattttaggttgggtattaggagccagatttggtatcaaagatgagttcaagaaagcaattatcaactatgctatctacaa 40721462  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||||||||| ||||||||||    
T  40721463 taggacttgttggaaacgattc 40721484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 30281652 - 30281751
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||| |||  | |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  30281652 catgcctaaaaagataactggtattaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 30281751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 25800665 - 25800782
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaa----gatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||      |||||||||||||||    |||||||||||||||| |||||||||| ||||||||||    
T  25800665 catgcctaaaaagatgactaattttaagtgggtgtta------agatttggtaccaaattaagatgagttcaaggaagcaattaccaac-atgttatcta 25800757  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  25800758 caataagacttgtttgaaacgattc 25800782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 44978868 - 44978768
Alignment:
Q  43 aattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgat 142  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||| |||||||| |  |||||||||||||||||    
T  44978868 aattttaagtgg-tattaggagccagatttggtaccaaagataagttcaaggaagcaattatcaattatgctatctacattctgacttgtttgaaacgat 44978770  T
Q  143 tc 144  Q
    ||    
T  44978769 tc 44978768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 50099241 - 50099298
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaa 81  Q
    ||||||||||||||||||||||||||||||| |||||  || || |||||||||||||    
T  50099241 catgcctaaaaagatgactaattttaagtggatgttaaaagtcatatttggtaccaaa 50099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 48802265 - 48802231
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaata 244  Q
    |||||||||||||||||||||||||||||||||||    
T  48802265 cttaaaggacctttagatgcatttgacctaaaata 48802231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 26549233 - 26549201
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||||||||    
T  26549233 cttaaaggacctttagatgcatttgacctaaaa 26549201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 37217103 - 37217135
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||||||||    
T  37217103 cttaaaggacctttagatgcatttgacctaaaa 37217135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 36157973 - 36158003
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaa 240  Q
    |||||||||||||||||||||||||||||||    
T  36157973 cttaaaggacctttagatgcatttgacctaa 36158003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 6711678 - 6711707
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  6711678 cttaaaggacctttagatgcatttgaccta 6711707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 16508195 - 16508224
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  16508195 cttaaaggacctttagatgcatttgaccta 16508224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 19274765 - 19274794
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  19274765 cttaaaggacctttagatgcatttgaccta 19274794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 21929366 - 21929333
Alignment:
Q  211 ttaaaggacctttagatgcatttgacctaaaata 244  Q
    ||||||||||||||||||||||||||| ||||||    
T  21929366 ttaaaggacctttagatgcatttgaccgaaaata 21929333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 24204405 - 24204377
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  24204405 cttaaaggacctttagatgcatttgacct 24204377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 25800848 - 25800876
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  25800848 cttaaaggacctttagatgcatttgacct 25800876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 28425297 - 28425269
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  28425297 cttaaaggacctttagatgcatttgacct 28425269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 34971275 - 34971303
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  34971275 cttaaaggacctttagatgcatttgacct 34971303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 46051324 - 46051292
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||| ||||||||||||||||||||||    
T  46051324 cttaaaggacatttagatgcatttgacctaaaa 46051292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 46051657 - 46051685
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  46051657 cttaaaggacctttagatgcatttgacct 46051685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 46095372 - 46095404
Alignment:
Q  211 ttaaaggacctttagatgcatttgacctaaaat 243  Q
    ||||||||||||||||||||||||| |||||||    
T  46095372 ttaaaggacctttagatgcatttgatctaaaat 46095404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 49594896 - 49594868
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  49594896 cttaaaggacctttagatgcatttgacct 49594868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 47271992 - 47272122
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  47271992 catcatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagattcggtaccaaagatgagttcaaggaagcaattaccaactatgt 47272091  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||||||||    
T  47272092 tatctacaataggacttgtttgaaacgattc 47272122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 2960764 - 2960640
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  2960764 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaaacaattaccaactatgctatcta 2960665  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  2960664 caataggacttgtttgaaacgattc 2960640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 47281244 - 47281124
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  47281244 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatggtatctacaat 47281145  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  47281144 aggacttgtttgaaacgattc 47281124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 11476678 - 11476556
Alignment:
Q  22 gccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctaca 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  11476678 gccatgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctaca 11476579  T
Q  122 ataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||    
T  11476578 ataggacttgtttgaaacgattc 11476556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 30798498 - 30798368
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  30798498 catcatttgcaatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgc 30798399  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||||| ||||||||||||||||    
T  30798398 tatctacaataggatttgtttgaaacgattc 30798368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 1469613 - 1469493
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  1469613 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaacaaagatgagttcaaggaagcaattaccaactatgctatctacaat 1469514  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  1469513 aggacttgtttgaaacgattc 1469493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 31684258 - 31684134
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||    
T  31684258 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaattaccaactattctatcta 31684159  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  31684158 caataggacttgtttgaaacgattc 31684134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 4923233 - 4923352
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  4923233 ttgccatgcctaaaaagatgactaattttaagtggatgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgctatcca 4923332  T
Q  120 caataggacttgtttgaaac 139  Q
    ||||||||||||||||||||    
T  4923333 caataggacttgtttgaaac 4923352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 23842323 - 23842446
Alignment:
Q  21 tgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctac 120  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  23842323 tgccatgcctaaaaagatgactaatttgaagtgggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatctac 23842422  T
Q  121 aataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||||    
T  23842423 aataggacttgtttgaaacgattc 23842446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 41113387 - 41113518
Alignment:
Q  13 tcatcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatg 112  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  41113387 tcatcatttgccatgtctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaatatgagttcaaggaagcaattaccaactatg 41113486  T
Q  113 ttatctacaataggacttgtttgaaacgattc 144  Q
     ||||||||||||||||||||||||| |||||    
T  41113487 ctatctacaataggacttgtttgaaatgattc 41113518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 44544430 - 44544549
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  44544430 catgcctaaaaagatgactaattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 44544529  T
Q  124 aggacttgtttgaaacgatt 143  Q
    ||||||||||||||||||||    
T  44544530 aggacttgtttgaaacgatt 44544549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 27364455 - 27364339
Alignment:
Q  28 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagga 127  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27364455 cctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagga 27364356  T
Q  128 cttgtttgaaacgattc 144  Q
      |||||||||||||||    
T  27364355 tctgtttgaaacgattc 27364339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 38427683 - 38427563
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||    
T  38427683 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaggaagcaattaccaactatgctatctataat 38427584  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  38427583 aggacttgtttgaaacgattc 38427563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 47219166 - 47219285
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  47219166 catgcctaaaaagatgactaattttaagtggatgttaggagccagatttagtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 47219265  T
Q  124 aggacttgtttgaaacgatt 143  Q
    ||||||||||||||||||||    
T  47219266 aggacttgtttgaaacgatt 47219285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 221298 - 221416
Alignment:
Q  26 tgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatag 125  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  221298 tgcctaaaaagaagactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaaacaattaccaactatgctatctacaatag 221397  T
Q  126 gacttgtttgaaacgattc 144  Q
    |||||||||||||||||||    
T  221398 gacttgtttgaaacgattc 221416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 8162832 - 8162712
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||    
T  8162832 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataacaaagatgagttcaaggaagcaattaccaactatgctatctacaat 8162733  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  8162732 aggacttgtttgaaacaattc 8162712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 35600242 - 35600122
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  35600242 catgcctaaaaagataactaattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 35600143  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  35600142 atgacttgtttgaaacgattc 35600122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 47294411 - 47294291
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  47294411 catgcctaaaaagatgactaattataagtgggtgttaggagccagattttgtaccaaagatgagttcaaggaagcaattaccaacgatgctatctacaat 47294312  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  47294311 aggacttgtttgaaacgattc 47294291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 33884340 - 33884459
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  33884340 catgcctaaaaagatggctaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 33884439  T
Q  124 aggacttgtttgaaacgatt 143  Q
    | ||||||||||||||||||    
T  33884440 atgacttgtttgaaacgatt 33884459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 40851297 - 40851415
Alignment:
Q  26 tgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatag 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  || |||||||||    
T  40851297 tgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagattagttcaaggaagcaattaccaactattctacctacaatag 40851396  T
Q  126 gacttgtttgaaacgattc 144  Q
    |||||||||||||||||||    
T  40851397 gacttgtttgaaacgattc 40851415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 11050382 - 11050261
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||    
T  11050382 ccatgcctaaaaagatgactaattttaagtgggtattaggaggcagatttggtaccaaagatgaattcaaggaagcaattaccaaatatgctatctacaa 11050283  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||    
T  11050282 taggacttgtttgaaacgattc 11050261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 37394118 - 37393998
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  37394118 catgcctaaaaagatgactaattttaactgggtgttaggagtcaaatttggtaccaaagatgagttcaaggaagcaactaccaactatgctatctacaat 37394019  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  37394018 aggacttgtttgaaacgattc 37393998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 48628826 - 48628946
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||    
T  48628826 catgcctaaaaagatgattaattttaagtgggtgttaggagccaaatttggtgcaaaaaatgagttcaaggaagcaattaccaactatgttatctacaat 48628925  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  48628926 aggacttgtttgaaacgattc 48628946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 30876280 - 30876400
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||    
T  30876280 catgcctaaaaagatgactaattttaagtgggtgttaggagcccaatttggtaccaaaaatgagttcaatgaagcaattaccaactatgctatctacaat 30876379  T
Q  124 aggacttgtttgaaacgattc 144  Q
    || ||||||||||||||||||    
T  30876380 agcacttgtttgaaacgattc 30876400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 30972061 - 30971941
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||    
T  30972061 catgcttaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgggtttaaggaagtaattaccaactatgccatctacaat 30971962  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  30971961 atgacttgtttgaaacgattc 30971941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 42979458 - 42979338
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||| ||||||||||||||||||||||| |    
T  42979458 catgcctaaaaagatgactaattttaagtggatgttaggagtcagatttgatatcaaagatgagttcaacgaagcaattaccaactatgttatctacagt 42979359  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  42979358 aggacttgtttgaaacgattc 42979338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 44800530 - 44800410
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||  ||||||||||||||||||||||||     
T  44800530 catgcctaaaaagatgactaattttaagtgggtgttaggaaccatatttggtaccaaagatgagttcaatgaaacaattaccaactatgttatctacaac 44800431  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  44800430 aggacttgtttgaaacaattc 44800410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 29248359 - 29248482
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||  |||||||||||||| ||||||    
T  29248359 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttgatgccaaagatgagttcaaggaatcaattaccaactatgctatcta 29248458  T
Q  120 caataggacttgtttgaaacgatt 143  Q
    ||||| ||||||||||||| ||||    
T  29248459 caataagacttgtttgaaatgatt 29248482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 43752894 - 43752776
Alignment:
Q  26 tgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatag 125  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||||| |||| ||||||||||||    
T  43752894 tgcctcaaaagatgactaattttaagtggatgttaggagtcagatttagtaccaaagatgagttcaaggaagcaattaccaattatgctatctacaatag 43752795  T
Q  126 gacttgtttgaaacgattc 144  Q
    |||||||||||||||||||    
T  43752794 gacttgtttgaaacgattc 43752776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 7336081 - 7336200
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||| ||||||||||    
T  7336081 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtatcaatgatgagttcaaggaagcaattatcaactatgctatctacaat 7336180  T
Q  124 aggacttgtttgaaacgattc 144  Q
    || || |||||||||||||||    
T  7336181 agaac-tgtttgaaacgattc 7336200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 41139532 - 41139408
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaac----tatgttatcta 119  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    |||| ||| ||    
T  41139532 catgcctaaaaagatgactaattttaagcgggtgttaggagccagatttagtaccaaagatgagttcaaggaagcaattaccaactatatatgctattta 41139433  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  41139432 caataggacttgtttgaaacgattc 41139408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 43968379 - 43968259
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||| |||||||||||||||||||||||| ||| |||||| ||||| || |||||||||||||||||||| |||||||||||| | ||||||||||    
T  43968379 catgcctataaagatgactaattttaagtgggtattatgagccaaatttgatatcaaagatgagttcaaggaagcaattaccaactacgctatctacaat 43968280  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  43968279 aggacttgtttgaaacgattc 43968259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 45723611 - 45723491
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||| || |||| ||||||||||    
T  45723611 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaagaaaacaattactaattatgctatctacaat 45723512  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | || ||||||||||||||||    
T  45723511 atgatttgtttgaaacgattc 45723491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 3797643 - 3797544
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  3797643 catgcctaaaaagatgactgattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattatcaactatgctatctacaat 3797544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 37354387 - 37354284
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||| ||||||    
T  37354387 ttgccatgcctaaaaagatgactgattttaagtgggtgttaggagccaaatttgataccaaagatgagttcaatgaagcaattaccaactatgctatcta 37354288  T
Q  120 caat 123  Q
    ||||    
T  37354287 caat 37354284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 47120012 - 47120134
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaac--tatgttatctaca 121  Q
    ||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||| ||||||||||| ||| ||||||||||  |||| | ||||||    
T  47120012 catgcctaaaaagataactaattttaagtgggtgttaggagtcatatttggtaccaaatatgagttcaagaaagcaattaccaactatatgctctctaca 47120111  T
Q  122 ataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||    
T  47120112 ataggacttgtttgaaacgattc 47120134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 18353165 - 18353285
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| |||||||||||||||||||||| | ||||||||||| ||||||||||| |||||||||||||||| ||  |||||||||||||| |||||||  |    
T  18353165 catgtctaaaaagatgactaattttaattaggtgttaggagtcagatttggtatcaaagatgagttcaagaaaacaattaccaactatgctatctacctt 18353264  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  18353265 aggacttgtttgaaacgattc 18353285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 27774125 - 27774228
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||||    
T  27774125 ttgccatgcctaaaaagatggctgattttaagtgggttttaggagccagatttggtaccaaggttgagttcaaggaagcaattaccaactatgctatcta 27774224  T
Q  120 caat 123  Q
    ||||    
T  27774225 caat 27774228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 47579203 - 47579086
Alignment:
Q  28 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaag-taattaccaactatgttatctacaatagg 126  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||| |||| |||||| ||||||    
T  47579203 cctaaaaagatggttaattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaagcaaattaccaattatgctatctataatagg 47579104  T
Q  127 acttgtttgaaacgattc 144  Q
    |||||| |||||| ||||    
T  47579103 acttgtctgaaacaattc 47579086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 40520935 - 40521011
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaa 96  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40520935 ttgccatggctaaaaagatgactgattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaa 40521011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 42888937 - 42888990
Alignment:
Q  91 aaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  42888937 aaggaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 42888990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 11476490 - 11476456
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaata 244  Q
    |||||||||||||||||||||||||||||||||||    
T  11476490 cttaaaggacctttagatgcatttgacctaaaata 11476456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 5106127 - 5106182
Alignment:
Q  88 ttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||| |||||||||||||| ||||||||||| ||  |||||||||||||||    
T  5106127 ttcaaggaagcaattaccaactatgctatctacaataaga-atgtttgaaacgattc 5106182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 39034083 - 39034122
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttagga 63  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  39034083 catgcctaaaaagatgattaattttaagtgggcgttagga 39034122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 47218990 - 47218959
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaa 241  Q
    ||||||||||||||||||||||||||||||||    
T  47218990 cttaaaggacctttagatgcatttgacctaaa 47218959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 31684401 - 31684430
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  31684401 cttaaaggacctttagatgcatttgaccta 31684430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 39033906 - 39033877
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  39033906 cttaaaggacctttagatgcatttgaccta 39033877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 43968555 - 43968584
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  43968555 cttaaaggacctttagatgcatttgaccta 43968584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 47281422 - 47281451
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  47281422 cttaaaggacctttagatgcatttgaccta 47281451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 48629012 - 48629041
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  48629012 cttaaaggacctttagatgcatttgaccta 48629041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 2960574 - 2960546
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  2960574 cttaaaggacctttagatgcatttgacct 2960546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 11476852 - 11476880
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  11476852 cttaaaggacctttagatgcatttgacct 11476880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 25801500 - 25801468
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||| ||||    
T  25801500 cttaaaggacctttagatgcatttgaccaaaaa 25801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 27773010 - 27772982
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  27773010 cttaaaggacctttagatgcatttgacct 27772982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 31684068 - 31684040
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  31684068 cttaaaggacctttagatgcatttgacct 31684040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 37393931 - 37393899
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||| ||||||||||||||||||||||    
T  37393931 cttaaaggacttttagatgcatttgacctaaaa 37393899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 45723425 - 45723397
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  45723425 cttaaaggacctttagatgcatttgacct 45723397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 47119865 - 47119837
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  47119865 cttaaaggacctttagatgcatttgacct 47119837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 47294225 - 47294197
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  47294225 cttaaaggacctttagatgcatttgacct 47294197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 47294558 - 47294590
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||| ||||    
T  47294558 cttaaaggacctttagatgcatttgaccaaaaa 47294590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 6740075 - 6739955
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6740075 catgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 6739976  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  6739975 aggacttgtttgaaacgattc 6739955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 11000852 - 11000728
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  11000852 ttgccaggcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 11000753  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  11000752 caataggacttgtttgaaacgattc 11000728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 14717626 - 14717746
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  14717626 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 14717725  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  14717726 aggacttgtttgaaacgattc 14717746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 27457321 - 27457197
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27457321 ttgccatgcctaaaaagatgactaatttaaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatcta 27457222  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  27457221 caatatgacttgtttgaaacgattc 27457197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 6600257 - 6600136
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  6600257 ccatgcctaaaaagatgactaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaa 6600158  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||    
T  6600157 taggacttgtttgaaacgattc 6600136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 3352122 - 3352002
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  3352122 catgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaatatgagttcaaggaagcaattaccaactatgttatctacaat 3352023  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  3352022 aggacttgtttgaaacgattc 3352002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 8689589 - 8689713
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  8689589 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaatcaattaccaactatgttatcta 8689688  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    || || |||||||||||||||||||    
T  8689689 cattatgacttgtttgaaacgattc 8689713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 14952341 - 14952465
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  14952341 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaggaagcaattaccaactatgttatcta 14952440  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||| | |||||||||||||||||||    
T  14952441 caacaagacttgtttgaaacgattc 14952465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 33760590 - 33760470
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33760590 catgactaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaagaagtaattaccaactatgctatctacaat 33760491  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  33760490 aggacttgtttgaaacgattc 33760470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 4015994 - 4015874
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4015994 catgcctaaaaatatgactaattttaagtaggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 4015895  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||| ||||||||||||    
T  4015894 aggacttgcttgaaacgattc 4015874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 8215925 - 8216041
Alignment:
Q  28 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagga 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  8215925 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaattaccaactatgctatctacaatagga 8216024  T
Q  128 cttgtttgaaacgattc 144  Q
    |||||||||||||||||    
T  8216025 cttgtttgaaacgattc 8216041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 20079378 - 20079258
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |    
T  20079378 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtactaaagatgagttcaaggaagcaattaccaactatgttatctacatt 20079279  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  20079278 aggacttgtttgaaacgattc 20079258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 30297869 - 30297749
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  30297869 catgcctaaaaagatgactaattttaagtgggtgctaggagccagatttggtaccaaagatgagttgaaggaagcaattaccaactatgctatctacaat 30297770  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  30297769 aggacttgtttgaaacgattc 30297749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 31710303 - 31710423
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  31710303 catgcctaaaaagatgactaattttaagtggatgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacatt 31710402  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  31710403 atgacttgtttgaaacgattc 31710423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 39002145 - 39002025
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  39002145 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 39002046  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||| ||||    
T  39002045 atgacttgtttgaaacaattc 39002025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 39824577 - 39824697
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  39824577 catgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagataagttcaaggaagcaattaccaactatgtcatctacaat 39824676  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  39824677 aggacttgtttgaaacgattc 39824697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 40074971 - 40075091
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  40074971 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttagtaccaaagatgagttcaatgaagcaattaccaactatgttatctacaat 40075070  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  40075071 aggacttgtttgaaacaattc 40075091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 41282363 - 41282482
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  41282363 catgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 41282462  T
Q  124 aggacttgtttgaaacgatt 143  Q
    ||||||||||||||| ||||    
T  41282463 aggacttgtttgaaatgatt 41282482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 42993538 - 42993659
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  42993538 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaa 42993637  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||| ||||||||||| ||||    
T  42993638 taggaattgtttgaaacaattc 42993659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 1052550 - 1052674
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  1052550 ttgccatgcttaaaaagatgagtaattttaagtgggtgttaggagccagatttggtaccaaggatgagttcaaggaagcaattaccaactatgctatcta 1052649  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||| ||||    
T  1052650 caataggacttgtttgaaacaattc 1052674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 6251993 - 6252113
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  6251993 catgcctaaaaagatgactaattttaagtgggtgttagaaggcagatttggtaccaaaaatgagttcaaggaagcaattaccaactatgctatctacaat 6252092  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  6252093 aggacttgtttgaaacgattc 6252113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 16096075 - 16095960
Alignment:
Q  28 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagga 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  16096075 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaa-gatgagttcaaggaagcaattaccaactatgctatctacaatagga 16095977  T
Q  128 cttgtttgaaacgattc 144  Q
    |||||||||||||||||    
T  16095976 cttgtttgaaacgattc 16095960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 20408550 - 20408674
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||| ||||||    
T  20408550 ttgccatgcctaaaaagatgactaattttaagcgggtgttaggagctagatttggtaccaaatatgagttcaatgaagcaattaccaactatgctatcta 20408649  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  20408650 caataggacttgtttgaaacgattc 20408674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 38964233 - 38964114
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  38964233 catgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 38964135  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  38964134 atgacttgtttgaaacgattc 38964114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 30863274 - 30863393
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||| |    
T  30863274 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaagaagcaattaccaactatgctatctacatt 30863373  T
Q  124 aggacttgtttgaaacgatt 143  Q
    | ||||||||||||||||||    
T  30863374 atgacttgtttgaaacgatt 30863393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 43166399 - 43166269
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||||     
T  43166399 catcatttgtcatgcctaaaaagatgactaattttaagtgggtgttatgagtcagatttggtaccaaagatgagttcaagaaagcaattaccaactatgc 43166300  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||| ||||    
T  43166299 tatctacaataggacttgtttgaaacaattc 43166269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 19659621 - 19659501
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||    
T  19659621 catgcctaaaaagatgactaattttaagtgggtattaggagccagatttggtaccaaagatgagttcaaaaaagcaattaccaactatgctatctacaat 19659522  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||| |||||||||||||    
T  19659521 aggacttatttgaaacgattc 19659501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 23129033 - 23128913
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||    
T  23129033 catgcctaaaaagatgactaattttaagtggttgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaattatgctatctacgat 23128934  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  23128933 atgacttgtttgaaacgattc 23128913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 26593400 - 26593280
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||    
T  26593400 catgcctaaaaagatgattaattttaagtgggtgttaggagccagatttggtaccaaagataagttcaaagaagcaattaccaactatgctatctacaat 26593301  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  26593300 atgacttgtttgaaacgattc 26593280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 35342201 - 35342321
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  35342201 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaggaagcaattatcaactatgctatctacaat 35342300  T
Q  124 aggacttgtttgaaacgattc 144  Q
      |||||||||||||||||||    
T  35342301 gagacttgtttgaaacgattc 35342321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 11692266 - 11692147
Alignment:
Q  25 atgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaata 124  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||    
T  11692266 atgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatctgcaata 11692167  T
Q  125 ggacttgtttgaaacgattc 144  Q
     |||||||||||||||||||    
T  11692166 tgacttgtttgaaacgattc 11692147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 30208522 - 30208402
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  30208522 catgcctaaaaagatgattaattttaagtaggtgttaggagccaaatttggtatcaaagatgagttcaaggaagcaattaccaactatgttatctacaat 30208423  T
Q  124 aggacttgtttgaaacgattc 144  Q
    || |||||||||||| |||||    
T  30208422 agaacttgtttgaaatgattc 30208402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 27116218 - 27116099
Alignment:
Q  25 atgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaata 124  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  27116218 atgcctaaaaagatgactaatttgaagtggatgttaggagccagatttggtaccaaatatgagttcaaggaagcaattaccaactatgctatctacaata 27116119  T
Q  125 ggacttgtttgaaacgattc 144  Q
    |||||||||| ||| |||||    
T  27116118 ggacttgtttaaaatgattc 27116099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 28078509 - 28078405
Alignment:
Q  40 actaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaac 139  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  28078509 actaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatctacattaggacttgtttgaaac 28078410  T
Q  140 gattc 144  Q
    |||||    
T  28078409 gattc 28078405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 11935468 - 11935586
Alignment:
Q  25 atgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaata 124  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| ||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  11935468 atgcctaaaaagatggctaattttaagtgagtgttaggagccacatttggttc-aaagatgagatcaaggaaacaattaccaactatgttatctacaata 11935566  T
Q  125 ggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||    
T  11935567 ggacttgtttgaaacgattc 11935586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 16752137 - 16752236
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16752137 catgcctaaaaagatgactgattttaagtggatgttaggatccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 16752236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 19398309 - 19398193
Alignment:
Q  28 cctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagga 127  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||| |    
T  19398309 cctaaaaagatgactaattttaagtgggtgttagaggctagatttggtaccaaagatgagttcaaagaaacaattaccaactatgctatctacaatagaa 19398210  T
Q  128 cttgtttgaaacgattc 144  Q
    ||||||||||| |||||    
T  19398209 cttgtttgaaatgattc 19398193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 6331398 - 6331479
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattacc 105  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  6331398 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattacc 6331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 26035464 - 26035367
Alignment:
Q  26 tgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  26035464 tgcctaaaaagatgactgattttaagtgggtattaggagccatatttggtaccaaagatgagttcaagaaagcaattaccaactatggtatctacaat 26035367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 8694887 - 8695007
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||| || ||||||||||||||||| || ||| |||||||||||||||| |||||||||||||| ||| |||||| ||| |||| ||||||||||    
T  8694887 catgcctaagaacatgactaattttaagtgagtattatgagccagatttggtactaaagatgagttcaatgaaataattatcaattatgctatctacaat 8694986  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  8694987 aggacttgtttgaaacaattc 8695007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 444971 - 445074
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||| ||||||||||| |||| ||||||||||||| ||||||| || ||||| ||||||||||||||||||| ||| |||||||||||||| ||||||    
T  444971 ttgccacgcctaaaaagacgactgattttaagtgggttttaggagtcatatttgataccaaagatgagttcaagaaagcaattaccaactatgctatcta 445070  T
Q  120 caat 123  Q
    ||||    
T  445071 caat 445074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 27510038 - 27510112
Alignment:
Q  70 tttggtaccaaagatgagttcaaggaagtaattaccaactatg-ttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  27510038 tttggtaccaaagatgagttcaaagaagcaattaccaactatgcttat-tacaataggacttgtttgaaacgattc 27510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 26035300 - 26035266
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaata 244  Q
    |||||||||||||||||||||||||||||||||||    
T  26035300 cttaaaggacctttagatgcatttgacctaaaata 26035266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 14717813 - 14717850
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaatatac 247  Q
    |||||||||| |||||||||||||||||||||||||||    
T  14717813 cttaaaggacttttagatgcatttgacctaaaatatac 14717850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 6332873 - 6332917
Alignment:
Q  100 attaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||    
T  6332873 attaccaactattctatctacaatagaacttgtttgaaacgattc 6332917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 4016169 - 4016199
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaa 240  Q
    |||||||||||||||||||||||||||||||    
T  4016169 cttaaaggacctttagatgcatttgacctaa 4016199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 6600432 - 6600462
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaa 240  Q
    |||||||||||||||||||||||||||||||    
T  6600432 cttaaaggacctttagatgcatttgacctaa 6600462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 20408740 - 20408770
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaa 240  Q
    |||||||||||||||||||||||||||||||    
T  20408740 cttaaaggacctttagatgcatttgacctaa 20408770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 38964048 - 38964018
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaa 240  Q
    |||||||||||||||||||||||||||||||    
T  38964048 cttaaaggacctttagatgcatttgacctaa 38964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 445141 - 445174
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaat 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  445141 cttaaaggaactttagatgcatttgacctaaaat 445174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 8215745 - 8215716
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  8215745 cttaaaggacctttagatgcatttgaccta 8215716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 11935322 - 11935293
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  11935322 cttaaaggacctttagatgcatttgaccta 11935293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 14717449 - 14717420
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  14717449 cttaaaggacctttagatgcatttgaccta 14717420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 17002452 - 17002481
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  17002452 cttaaaggacctttagatgcatttgaccta 17002481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 35861501 - 35861530
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  35861501 cttaaaggacctttagatgcatttgaccta 35861530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 239
Target Start/End: Original strand, 3352298 - 3352326
Alignment:
Q  211 ttaaaggacctttagatgcatttgaccta 239  Q
    |||||||||||||||||||||||||||||    
T  3352298 ttaaaggacctttagatgcatttgaccta 3352326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 6252179 - 6252207
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  6252179 cttaaaggacctttagatgcatttgacct 6252207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 11001024 - 11001052
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  11001024 cttaaaggacctttagatgcatttgacct 11001052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 239
Target Start/End: Complemental strand, 16751989 - 16751961
Alignment:
Q  211 ttaaaggacctttagatgcatttgaccta 239  Q
    |||||||||||||||||||||||||||||    
T  16751989 ttaaaggacctttagatgcatttgaccta 16751961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 19659435 - 19659407
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  19659435 cttaaaggacctttagatgcatttgacct 19659407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 26593576 - 26593604
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  26593576 cttaaaggacctttagatgcatttgacct 26593604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 27509999 - 27510027
Alignment:
Q  24 catgcctaaaaagatgactaattttaagt 52  Q
    |||||||||||||||||||||||||||||    
T  27509999 catgcctaaaaagatgactaattttaagt 27510027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 28078339 - 28078307
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||| ||||||||||||||||||||||||||    
T  28078339 cttaaaagacctttagatgcatttgacctaaaa 28078307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 33003248 - 33003276
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  33003248 cttaaaggacctttagatgcatttgacct 33003276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 5e-57; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 23135126 - 23135006
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23135126 catgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 23135027  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  23135026 aggacttgtttgaaacgattc 23135006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 24458755 - 24458631
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24458755 ttgccatgcctaaaaagatgactaattttaagtgggtgttacgagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatcta 24458656  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  24458655 caataagacttgtttgaaacgattc 24458631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 26017444 - 26017564
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  26017444 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 26017543  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  26017544 aggacttgtttgaaacgattc 26017564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 4545105 - 4544985
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  4545105 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtatcaaagatgagtttaaggaagcaattaccaactatgttatctacaat 4545006  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  4545005 aggacttgtttgaaacgattc 4544985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 31973608 - 31973732
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  31973608 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 31973707  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||| ||||||||||||||||||    
T  31973708 caatagaacttgtttgaaacgattc 31973732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 42273823 - 42273943
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  42273823 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 42273922  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  42273923 aggacttgtttgaaacgattc 42273943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 28264664 - 28264784
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  28264664 catgcctaaaaagatgactaattttaagtgggtgttatgagacagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 28264763  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  28264764 aggacttgtttgaaacgattc 28264784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 28812410 - 28812287
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  28812410 ttgccatgcctaaaaagatgactaattttaagtgg-tgttaggagccagatttggtaccaaagatgacttcaaggaagcaattaccaactatgctatcta 28812312  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  28812311 caataggacttgtttgaaacgattc 28812287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 30467127 - 30467003
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  30467127 ttgccatgcctaaaaagatgactaattttaaatgggtgttaggagcgagatttggtaccaaagatgagttcaaggaagaaattaccaactatgctatcta 30467028  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||| ||||||||||||||||||    
T  30467027 caatagaacttgtttgaaacgattc 30467003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 32317974 - 32318094
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  32317974 catgcctaaaaagatgactaattttaagtgggtgttaggagacagatttggtaccaaagatgagttcaatgaagcaattaccaactatgttatctacaat 32318073  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||||||||||| |||||    
T  32318074 aggacttgtttgaaatgattc 32318094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 33807900 - 33807780
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  33807900 catgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaagaagcaattaccaactatgctatctacaat 33807801  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  33807800 aggacttgtttgaaacgattc 33807780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 39995291 - 39995167
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  39995291 ttgccatgcctaaaaagatgattaattttaagtgggttttaggagccagatttggtaccaaagatgagttcaatgaagcaattaccaactatgttatcta 39995192  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||| ||||||||||||||||||    
T  39995191 caatagaacttgtttgaaacgattc 39995167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 49118632 - 49118752
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  49118632 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaatgaagcaattaccaactatgctatctacaat 49118731  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  49118732 aggacttgtttgaaacgattc 49118752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 40988654 - 40988773
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  40988654 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaggaagcaattatcaactatgctatctacaat 40988753  T
Q  124 aggacttgtttgaaacgatt 143  Q
    ||||||||||||||||||||    
T  40988754 aggacttgtttgaaacgatt 40988773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 238 - 340
Target Start/End: Original strand, 20818874 - 20818976
Alignment:
Q  238 taaaatatacaaagagactcctttttcttcctcaaaaaccattgccaagacaaactttcaagaatttggatttaatccattacttgagtgaagatgattg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20818874 taaaatatacaaagagactcctttttcttcctcaaaaaccattgccaagacaaactttcaagaatttggatttaatccattacttgagtgaagatgattg 20818973  T
Q  338 aag 340  Q
    |||    
T  20818974 aag 20818976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 31591100 - 31591216
Alignment:
Q  27 gcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaatagg 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  31591100 gcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaatagg 31591198  T
Q  127 acttgtttgaaacgattc 144  Q
    ||||||||||||||||||    
T  31591199 acttgtttgaaacgattc 31591216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 12196490 - 12196610
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  12196490 catgcctaaaaagatgattaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaattaccaactatgctatctacaat 12196589  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||||||||||| |||||    
T  12196590 aggacttgtttgaaatgattc 12196610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 17847219 - 17847096
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| ||||||    
T  17847219 ttgccatgcctaaaa-gatgactaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaattaccaattatgctatcta 17847121  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  17847120 caataggacttgtttgaaacgattc 17847096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 19496222 - 19496102
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  19496222 catgcctaaaaagatgactaattttaagtgggtgttaggcgccaaatttggtaccaaagatgagttcaaggaagcaattaccaactatggtatctacaat 19496123  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  19496122 aggacttgtttgaaacaattc 19496102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 35930060 - 35930180
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||    
T  35930060 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcatggaagcaattaccaactatgctatctacaat 35930159  T
Q  124 aggacttgtttgaaacgattc 144  Q
    || ||||||||||||||||||    
T  35930160 agaacttgtttgaaacgattc 35930180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 44490340 - 44490460
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  44490340 catgcctaaaaagatgactaactttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaatgaagcaattaccaactatgatatctacaat 44490439  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  44490440 aggacttgtttgaaacgattc 44490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 48149520 - 48149640
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  48149520 catgcctaaaaagatgagtaattttaagtgggtgtcaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacatt 48149619  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  48149620 aggacttgtttgaaacgattc 48149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 48707853 - 48707733
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  48707853 catgcctaaaaagatgactaattttaagtggatgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 48707754  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||||||||||| |||||    
T  48707753 aggacttgtttgaaaagattc 48707733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 55517305 - 55517185
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||    
T  55517305 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaagaagcaattaccaactatgctatctacaat 55517206  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  55517205 atgacttgtttgaaacgattc 55517185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 10588600 - 10588719
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  10588600 ccatgcctaaaaagatgactagttttaagtgggtgttaggagccagatttggtaccaaatatgagttcaaggaagcaattaccaactatgctatctacaa 10588699  T
Q  123 taggacttgtttgaaacgat 142  Q
    || |||||||||||||||||    
T  10588700 tacgacttgtttgaaacgat 10588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 30141238 - 30141108
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||     
T  30141238 catcatttgcaatgcctaaaaagatgactaattttaagtgggtgttaagagccagatttgataccaaagatgagttcaatgaagcaattaccaactatgc 30141139  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    |||| ||||||||||||||||||||||||||    
T  30141138 tatcaacaataggacttgtttgaaacgattc 30141108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 33693462 - 33693333
Alignment:
Q  15 atcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgtt 114  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| |    
T  33693462 atcatttgccatgtctaaaaagatgaataattttaagtgggtgttaggaatcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgct 33693363  T
Q  115 atctacaataggacttgtttgaaacgattc 144  Q
    |||||||| |||||||||||||||||||||    
T  33693362 atctacaacaggacttgtttgaaacgattc 33693333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 2055299 - 2055419
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  2055299 catgcctaaaaagatgattaactttaagtgggtgttaggagccagatttggtaccaaagatgagtttaaggaagcaattatcaactatgttatctacaat 2055398  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  2055399 atgacttgtttgaaacgattc 2055419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 5227411 - 5227531
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  5227411 catgcctaaaaagatgactaattttaagtggatactaggagccagatttggtaccaaaaatgagttcaaggaagcaattaccaactatgctatctacaat 5227510  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  5227511 aggacttgtttgaaacgattc 5227531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 8882133 - 8882013
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||| |||||||| |||||| |||    
T  8882133 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaagaagcaattatcaactatgctatctagaat 8882034  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  8882033 aggacttgtttgaaacgattc 8882013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 11795274 - 11795154
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| |||||| |||    
T  11795274 catgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaaacaattaccaactatgctatctagaat 11795175  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  11795174 atgacttgtttgaaacgattc 11795154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 14564813 - 14564937
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||| |||||||||||||| ||| ||    
T  14564813 ttgccatgcctaaaaagatgactaattttaactgggtgttaggagccagatttggtacgaaaaatgagttcaatgaagcaattaccaactatgctatata 14564912  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  14564913 caataggacttgtttgaaacgattc 14564937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 25734343 - 25734223
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||  ||| |||||||||||||||||||||||||    
T  25734343 catgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtacgaaagatgagttcaattaagcaattaccaactatgttatctacaat 25734244  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||||||||||| |||||    
T  25734243 aggacttgtttgaaatgattc 25734223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 28160073 - 28159953
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  28160073 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaagaaagcaattaccaactatggtatctacaat 28159974  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | ||||||||||||| |||||    
T  28159973 aagacttgtttgaaatgattc 28159953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 48551888 - 48551764
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| |||||||||| ||| ||||||    
T  48551888 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagtcagattttgtaccaaagatgagttcaagaaagcaattaccaaccatgctatcta 48551789  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  48551788 caatatgacttgtttgaaacgattc 48551764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 32118735 - 32118854
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  32118735 catgcctaaaaagatgattaattttaagggggtgttaggagccagatttggtaccaaagatgagttcaatgaagcaattaccaactatgctatctacaat 32118834  T
Q  124 aggacttgtttgaaacgatt 143  Q
    || |||||||||||||||||    
T  32118835 agaacttgtttgaaacgatt 32118854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 33174140 - 33174021
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  |||||||||    
T  33174140 catgcataaaaagatgactaattttaagtgggtgttaggagccagatttggtactaaagatgagttcaaggaagcaattaccaactatgaaatctacaat 33174041  T
Q  124 aggacttgtttgaaacgatt 143  Q
    | ||||||||||||||||||    
T  33174040 aagacttgtttgaaacgatt 33174021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 50276259 - 50276138
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||   |||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  50276259 ttgccatgcctaaaaaga---ctaattttaagtgggtgttaggaatcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 50276163  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  50276162 caataggacttgtttgaaacgattc 50276138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 9339246 - 9339123
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaa---gatgagttcaaggaagtaattaccaactatgttatctac 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||||    
T  9339246 catgcataaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaatatgatgagttcaaggaagcaattaccaactatgttatctac 9339147  T
Q  121 aataggacttgtttgaaacgattc 144  Q
    |||| ||||||||||||| |||||    
T  9339146 aatatgacttgtttgaaatgattc 9339123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 31208776 - 31208885
Alignment:
Q  35 agatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgttt 134  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  31208776 agatgactaattttaagtgggtgttgggagccagatttgataccaaagatgagttcaaggaagcaattaccaactatgctatctacaataggacttgttt 31208875  T
Q  135 gaaacgattc 144  Q
    ||||||||||    
T  31208876 gaaacgattc 31208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 15985031 - 15985151
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||    
T  15985031 catgcctaaaaagattactgattttaagtaggtgttaggagccagatttggtactaaagatgagttcaaggaagcaattaccaactatgttatctagaat 15985130  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  15985131 atgacttgtttgaaacgattc 15985151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 39700066 - 39700186
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| |||    
T  39700066 catgcctaaaaagatgactaattttaagtgagtgttaagagccagatttggtaccaaagatgagttcaaggaaacaattaccaattatgttatctataat 39700165  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  39700166 aagacttgtttgaaacgattc 39700186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 51371171 - 51371047
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  51371171 ttgccatgtctaaaaaaatgactaattttaagtgggtgttaggagttagatttggtaccaaagatgaattcaaggaagcaattaccaactatgctatcta 51371072  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||| ||||||||||||||||||    
T  51371071 caatagaacttgtttgaaacgattc 51371047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 50542475 - 50542354
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  50542475 ccatgcctaaaaagatgattaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaatgaagcaattaccaactatgctatctacaa 50542376  T
Q  123 taggacttgtttgaaacgattc 144  Q
    || || |||||| |||||||||    
T  50542375 taagatttgtttaaaacgattc 50542354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 17993137 - 17993017
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| ||  ||||||||||| ||||||| |||||||||||||| ||| ||||||    
T  17993137 catgcctaaaaagatgactaattttaagtgggtgttaagagccaaatttgatagaaaagatgagtttaaggaagcaattaccaactatgctatttacaat 17993038  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  17993037 aggacttgtttgaaacgattc 17993017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 23553086 - 23553205
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| ||| |||| |||||||||     
T  23553086 catgcctaaaaagatgactaattttaagtgg-tgttaggagccagatttggtatcaaagatgagttcaaggaagcaattaacaattatgctatctacaac 23553184  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  23553185 atgacttgtttgaaacgattc 23553205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 25730257 - 25730381
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| | ||||| || ||||||||||||||||||||  |||||||||||||| ||||||    
T  25730257 ttgctatgcctaaaaagatgactaattttaagtggatgttaggagtcggatttagtgccaaagatgagttcaaggaatcaattaccaactatgctatcta 25730356  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  25730357 caatatgacttgtttgaaacgattc 25730381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 37381867 - 37381986
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||||| |||||||||||||| ||||||||||    
T  37381867 catgtctaaaaagatgactaattttaagtgggtgttaggaaccagatatggtaccaaaaatgagtttaaggaagcaattaccaactatgctatctacaat 37381966  T
Q  124 aggacttgtttgaaacgatt 143  Q
    | ||||||||||||| ||||    
T  37381967 atgacttgtttgaaatgatt 37381986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 22298546 - 22298659
Alignment:
Q  31 aaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggactt 130  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||  ||||||||| |||| ||||||||||||| |||    
T  22298546 aaaaagatgactaattttaagtgggtgttaggagccagatttgatatcaaagatgagtttaaggaaacaattaccaattatgctatctacaatagggctt 22298645  T
Q  131 gtttgaaacgattc 144  Q
    ||||||||||||||    
T  22298646 gtttgaaacgattc 22298659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 24623169 - 24623268
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  24623169 catgcctaaaaaaataactgattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 24623268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 19168915 - 19168816
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  19168915 catgcctaaaaagatgactgattttaagtgggtgttatgagtcaaatttgataccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 19168816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 42549742 - 42549643
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| | |||||||||||||||||||||||| |||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  42549742 catgcctaaaaagatgattgattttaagtgggtgttaggagccaaatttagtaccaaagataagttcaatgaagcaattaccaactatgttatctacaat 42549643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 406 - 501
Target Start/End: Original strand, 20819042 - 20819137
Alignment:
Q  406 gggttttactatcttatgtttaggtatgannnnnnngggtcaattagaactaagatatctatttatattgccttctattgctttttatgaagaagc 501  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20819042 gggttttactatcttatgtttaggtatgatttttttgggtcaattagaactaagatatctatttatattgcattctattgctttttatgaagaagc 20819137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 20534225 - 20534306
Alignment:
Q  63 agccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||||    
T  20534225 agccagatttggtaccaaagatgagttcaaagaagcaattaccaactatgctatcaacaataggacttgtttgaaacgattc 20534306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 56555260 - 56555200
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagat 84  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  56555260 catgcctaaaaagatgactaattttaagtgggtgtcaggagccagatttggtaccaaagat 56555200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 56555200 - 56555165
Alignment:
Q  109 tatgttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||||||||||||||||    
T  56555200 tatgttatctacaataggacttgtttgaaacgattc 56555165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 19496442 - 19496475
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaat 243  Q
    ||||||||||||||||||||||||||||||||||    
T  19496442 cttaaaggacctttagatgcatttgacctaaaat 19496475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 22298364 - 22298331
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaat 243  Q
    ||||||||||||||||||||||||||||||||||    
T  22298364 cttaaaggacctttagatgcatttgacctaaaat 22298331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 17847420 - 17847452
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||||||||    
T  17847420 cttaaaggacctttagatgcatttgacctaaaa 17847452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 26017297 - 26017265
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||||||||    
T  26017297 cttaaaggacctttagatgcatttgacctaaaa 26017265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 42273676 - 42273640
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaatata 246  Q
    |||||||||||||||||||||||||||||||| ||||    
T  42273676 cttaaaggacctttagatgcatttgacctaaattata 42273640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 2055130 - 2055099
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaa 241  Q
    ||||||||||||||||||||||||||||||||    
T  2055130 cttaaaggacctttagatgcatttgacctaaa 2055099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 19169062 - 19169092
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaa 240  Q
    |||||||||||||||||||||||||||||||    
T  19169062 cttaaaggacctttagatgcatttgacctaa 19169092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 50276431 - 50276461
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaa 240  Q
    |||||||||||||||||||||||||||||||    
T  50276431 cttaaaggacctttagatgcatttgacctaa 50276461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 5227597 - 5227626
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  5227597 cttaaaggacctttagatgcatttgaccta 5227626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 28160251 - 28160280
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  28160251 cttaaaggacctttagatgcatttgaccta 28160280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 28264850 - 28264879
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  28264850 cttaaaggacctttagatgcatttgaccta 28264879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 30141373 - 30141402
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  30141373 cttaaaggacctttagatgcatttgaccta 30141402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 239
Target Start/End: Original strand, 8882311 - 8882339
Alignment:
Q  211 ttaaaggacctttagatgcatttgaccta 239  Q
    |||||||||||||||||||||||||||||    
T  8882311 ttaaaggacctttagatgcatttgaccta 8882339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 17847031 - 17847003
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  17847031 cttaaaggacctttagatgcatttgacct 17847003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 28264517 - 28264489
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  28264517 cttaaaggacctttagatgcatttgacct 28264489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 28812221 - 28812189
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||| ||||    
T  28812221 cttaaaggacctttagatgcatttgaccaaaaa 28812189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 33173954 - 33173926
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  33173954 cttaaaggacctttagatgcatttgacct 33173926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 36444616 - 36444588
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  36444616 cttaaaggacctttagatgcatttgacct 36444588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 37381691 - 37381651
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaatatacaaa 250  Q
    ||||||||||||||||||  ||||||||||||| |||||||    
T  37381691 cttaaaggacctttagataaatttgacctaaaaaatacaaa 37381651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 51371372 - 51371400
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  51371372 cttaaaggacctttagatgcatttgacct 51371400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 56555440 - 56555468
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  56555440 cttaaaggacctttagatgcatttgacct 56555468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 33151717 - 33151837
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  33151717 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagattagttcaaggaagcaattaccaactatgttatctacaat 33151816  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  33151817 aggacttgtttgaaacgattc 33151837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 42016884 - 42017014
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  42016884 catcatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaatgaagcaattaccaactatgt 42016983  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||| |||||||||||||||||||    
T  42016984 tatctacaatatgacttgtttgaaacgattc 42017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 1687672 - 1687792
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  1687672 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 1687771  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  1687772 aggacttgtttgaaacgattc 1687792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 21564513 - 21564637
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  21564513 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccatatttgataccaaagatgagttcaaggaagcaattaccaactatgctatcta 21564612  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  21564613 caataggacttgtttgaaacgattc 21564637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 38446497 - 38446617
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  38446497 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 38446596  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  38446597 atgacttgtttgaaacgattc 38446617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 20086435 - 20086314
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||    
T  20086435 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaagtatgctatctataa 20086336  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||    
T  20086335 taggacttgtttgaaacgattc 20086314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 1017065 - 1017185
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  1017065 catgcctaaaaagatgactaattttaagtgggtgttatgagacagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 1017164  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  1017165 aggacttgtttgaaacgattc 1017185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 21656539 - 21656659
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  21656539 catgcctaaaaaggtgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatatacaat 21656638  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  21656639 aggacttgtttgaaacgattc 21656659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 21890191 - 21890311
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||    
T  21890191 catgcctaaaaagatgactaattttaagtgggtgttaggagctagatttggtaccaaagatgagttcaaggaagcaattaccaaatatgttatctataat 21890290  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  21890291 aggacttgtttgaaacgattc 21890311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 31122679 - 31122803
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  31122679 ttgccatgcctaaaaagatgactaattttaagcgggtcttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 31122778  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  31122779 caataagacttgtttgaaacgattc 31122803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 35346591 - 35346471
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  35346591 catgcctaaaaagatgactaattttaagtgggtgttaggagccagattttgtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 35346492  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  35346491 atgacttgtttgaaacgattc 35346471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 42107219 - 42107099
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  ||||||||||    
T  42107219 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtgtcaaagatgagttcaaggaagtaattaccaactatactatctacaat 42107120  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  42107119 aggacttgtttgaaacgattc 42107099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 53196031 - 53196155
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  53196031 ttgccatgcctaaaaagataactaattttaagtgggtgttaggagcgagatttggtaccaaagatgagttcaaggaaataattaccaactatgttatcta 53196130  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| ||||| |||||||||||||    
T  53196131 caataagacttctttgaaacgattc 53196155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 37247966 - 37248097
Alignment:
Q  13 tcatcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatg 112  Q
    |||||| ||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  37247966 tcatcatttgtcatgcatgaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaatgaagcaattaccaactatg 37248065  T
Q  113 ttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||||||||||||    
T  37248066 ttatctacaataggacttgtttgaaacgattc 37248097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 40922286 - 40922165
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40922286 ccatgcctaaaaaaattactaattttaagtggatgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgctatctacaa 40922187  T
Q  123 taggacttgtttgaaacgattc 144  Q
    || |||||||||||||||||||    
T  40922186 tacgacttgtttgaaacgattc 40922165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 20760191 - 20760071
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  20760191 catgcctaaaaagatgactaattttaagtggatgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 20760092  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  20760091 atgacttgtttgaaacgattc 20760071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 20813561 - 20813441
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| |    
T  20813561 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaattatgctatctacatt 20813462  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  20813461 atgacttgtttgaaacgattc 20813441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 32650944 - 32650820
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  32650944 ttgccatgcctagaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 32650845  T
Q  120 caataggacttgtttgaaacgattc 144  Q
     ||||| |||||||||||| |||||    
T  32650844 taatagaacttgtttgaaatgattc 32650820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 41250903 - 41251027
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  41250903 ttgccatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagatgagttcaaggaaacaattaccaactatgctatcta 41251002  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||| ||||    
T  41251003 caataagacttgtttgaaacaattc 41251027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 47329299 - 47329175
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  47329299 ttgccatacctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 47329200  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    | ||| |||||||| ||||||||||    
T  47329199 cgatatgacttgttggaaacgattc 47329175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 51562183 - 51562303
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |    
T  51562183 catgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaaacaattaccaactatgttatctacatt 51562282  T
Q  124 aggacttgtttgaaacgattc 144  Q
    || ||||||||||||||||||    
T  51562283 agaacttgtttgaaacgattc 51562303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 3697163 - 3697287
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||  ||||||    
T  3697163 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagcgagatttggtaccaaagatgaattcaatgaagcaattaccaactatactatcta 3697262  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||| |||||    
T  3697263 caataggacttgtttgaaaggattc 3697287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 10618600 - 10618480
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  10618600 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttgataccaaagatgagttcaatgaagcaattaccaattatgtcatctacaat 10618501  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  10618500 aggacttgtttgaaacgattc 10618480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 12748408 - 12748524
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  12748408 ttgccatgcctaaaaagatgactaattttaagtgggtgttagaaaacagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 12748507  T
Q  120 caataggacttgtttga 136  Q
    |||||||||||||||||    
T  12748508 caataggacttgtttga 12748524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 26455603 - 26455723
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||     
T  26455603 catgcctaaaaagatgactaattttaagtgggtgttaggaaccaaatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaac 26455702  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  26455703 atgacttgtttgaaacgattc 26455723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 36315092 - 36314972
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  36315092 catgcctaaaaagatgactaattttaagtgggtgttaagagccagatttgatactaaagatgagttcaaggaagcaattaccaactatgctatctacaat 36314993  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  36314992 aggacttgtttgaaacaattc 36314972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 50287587 - 50287707
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| || |||| |||||||||||||| ||||||||||    
T  50287587 catgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaatatgagtttaatgaagcaattaccaactatgctatctacaat 50287686  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  50287687 aggacttgtttgaaacgattc 50287707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 20913876 - 20913754
Alignment:
Q  22 gccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctaca 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||| |||||||| ||||||||    
T  20913876 gccatgcctaaaaagatgactaattttaagtggatgttaggagccatatttggtaccaaagatgagttcaaagaagcaattatcaactatgctatctaca 20913777  T
Q  122 ataggacttgtttgaaacgattc 144  Q
    |||| ||||||||||||||||||    
T  20913776 atagaacttgtttgaaacgattc 20913754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 20921994 - 20921872
Alignment:
Q  22 gccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctaca 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||| |||||||| ||||||||    
T  20921994 gccatgcctaaaaagatgactaattttaagtggatgttaggagccatatttggtaccaaagatgagttcaaagaagcaattatcaactatgctatctaca 20921895  T
Q  122 ataggacttgtttgaaacgattc 144  Q
    |||| ||||||||||||||||||    
T  20921894 atagaacttgtttgaaacgattc 20921872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 44798289 - 44798408
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  44798289 catgcctaaaaa-atgagtaattttaagtgggtgttaggagccagattcggtaccaaagatgagttcaagaaagcaattaccaactatgctatctacaat 44798387  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  44798388 aggacttgtttgaaacgattc 44798408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 48651265 - 48651389
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||    
T  48651265 ttgccatgcctaaaaagacgattaattttaagtgggtgttagaagccagatttggtatcaaagatgagtttaaggaagcaattaccaactatgctatcta 48651364  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    || ||||||||||||||||||||||    
T  48651365 cattaggacttgtttgaaacgattc 48651389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 19664562 - 19664677
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  19664562 catgcctaaaaagatgactaattttaagtggatgttatgagtcagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatctacaat 19664661  T
Q  124 aggacttgtttgaaac 139  Q
    ||||||||||||||||    
T  19664662 aggacttgtttgaaac 19664677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 29677497 - 29677616
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||| ||    
T  29677497 catgcctaaaaagatgattaattttaaatgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacaaactatgatatctacgat 29677596  T
Q  124 aggacttgtttgaaacgatt 143  Q
    ||||| ||||||||||||||    
T  29677597 aggacctgtttgaaacgatt 29677616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 52821168 - 52821049
Alignment:
Q  25 atgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaata 124  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  52821168 atgcctaaaaagatgactaattttaagtgggtgttaggagccagttttactaccaaagatgagttcaaagaagcaattaccaactatgttatctacaaca 52821069  T
Q  125 ggacttgtttgaaacgattc 144  Q
    |||||||||| |||||||||    
T  52821068 ggacttgtttaaaacgattc 52821049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 1448856 - 1448735
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||   |    
T  1448856 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgatactaaagatgagttcaaggaagcaattaccaactatggta---a 1448760  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||||||||| |||||||||||||    
T  1448759 caataggacttctttgaaacgattc 1448735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 22852017 - 22852131
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  22852017 catgcctaaacagatgactaattttaagtgggtgttaggagccatatttagtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 22852116  T
Q  124 aggacttgtttgaaa 138  Q
    ||||||| |||||||    
T  22852117 aggacttatttgaaa 22852131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 27070851 - 27070739
Alignment:
Q  32 aaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttg 131  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  27070851 aaaagatgactaattttaagtgagtgttaggaggcagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatctacaataagacttg 27070752  T
Q  132 tttgaaacgattc 144  Q
    |||||||||||||    
T  27070751 tttgaaacgattc 27070739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 35608251 - 35608131
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||  ||||||||| |||| ||||||||||    
T  35608251 catgcctaaaaagatgactaagtttaagtgggtgttaggagtccgatttggtaccaaagatgagttcaaggaaccaattaccaattatgctatctacaat 35608152  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||| |||||||||||||    
T  35608151 aggacttatttgaaacgattc 35608131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 19268542 - 19268668
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaacta------tgttatc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||      |||||||    
T  19268542 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaatgaagcaattaccaactatgttattgttatc 19268641  T
Q  118 tacaataggacttgtttgaaacgattc 144  Q
    |||| |||||||||||| |||||||||    
T  19268642 tacattaggacttgtttaaaacgattc 19268668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 55164235 - 55164115
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||| ||||||||||    
T  55164235 catgcctaaaaagatgactaattttaagtaggtgttaggagccagatttgatatcaaagatgagttcaaggaagcaattagcaactatgctatctacaat 55164136  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | ||||| |||||||| ||||    
T  55164135 atgacttatttgaaacaattc 55164115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 50365011 - 50364908
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50365011 ttgccatgcctaaaaagattactgattttaagtgagtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatcta 50364912  T
Q  120 caat 123  Q
    ||||    
T  50364911 caat 50364908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 53926099 - 53925979
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||||||  ||||||||||    
T  53926099 catgcttaaaaagatgactaattttaagtgggtgttaggagtcatatttggtaccaaagatgagttcaatgaagcaattaccaactatactatctacaat 53926000  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | ||||| ||||||| |||||    
T  53925999 atgacttatttgaaatgattc 53925979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 33473359 - 33473239
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||| |  ||||||||  |||||||||||||||||||||||||    
T  33473359 catgactaaaaagatgactaattttaagtgcgtgttagaaaccagatttggtaccaaagataaaatcaaggaaacaattaccaactatgttatctacaat 33473260  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |  ||||||||||||||||||    
T  33473259 aaaacttgtttgaaacgattc 33473239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 39069743 - 39069867
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||  ||||| |||||||| |||  |    
T  39069743 ttgccatgcatgaaaagatgactaattttaagtgggtgttaagagccagatttggtaccaaagataagttaaaggaaacaattatcaactatgctattaa 39069842  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  39069843 caatatgacttgtttgaaacgattc 39069867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 50977885 - 50977984
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  50977885 catgcctaaaaacatgactgattttaagtgggcgttaggagccagatttggtaccaaagatgagttcaaggaagcaactaccaactatgctatctacaat 50977984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 51081017 - 51081116
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  51081017 catgcctaaaaacatgactgattttaagtgggcgttaggagccagatttggtaccaaagatgagttcaaggaagcaactaccaactatgctatctacaat 51081116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 51475366 - 51475267
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  51475366 catgcctaaaaagatgactgattttaagtgggtgttatgaggcagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatctacaat 51475267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 45380381 - 45380260
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaatta-ccaactatgttatctaca 121  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||| ||||| | ||||||| ||||||||    
T  45380381 ccatgcataaaaagatgactaattttaagtgg-tgttatgagccagatttggtaccaaagatgagtttaaagaagcaattatcaaactatgctatctaca 45380283  T
Q  122 ataggacttgtttgaaacgattc 144  Q
    |||| ||||||||||||||||||    
T  45380282 atagaacttgtttgaaacgattc 45380260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 38924118 - 38923998
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||| |||| |||||| ||||||||||||| ||||||||| |  |||||||||||||||| ||||||| |||| ||||||||||||| |||||||| ||    
T  38924118 catgcttaaagagatgattaattttaagtggatgttaggagtccaatttggtaccaaagataagttcaacgaagcaattaccaactattttatctacgat 38924019  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  38924018 aggacttgtttgaaacaattc 38923998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 28699702 - 28699785
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaatta 103  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  28699702 ttgccatgcctaaaaagatgactgattttaagtgggtgttaggagtcagatttggtgccaaagatgagttcaaggaagcaatta 28699785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 34019481 - 34019580
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||   |||||||||| ||| ||||| |||||||| ||||||||||    
T  34019481 catgcctaaaaatatggctgattttaagtgggtgttaggagtcagatttggtaccaacagtgagttcaagtaagcaattatcaactatgctatctacaat 34019580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 42641288 - 42641213
Alignment:
Q  34 aagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaact 109  Q
    ||||||| | ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  42641288 aagatgattgattttaagtgggtgttaggaggcagacttggtaccaaagatgagttcaaggaagcaattaccaact 42641213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 44152721 - 44152777
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaa 80  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  44152721 catgcctaaaaagatgattaattttaagtgggtgttaggagtcagatttggtaccaa 44152777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 47473251 - 47473294
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagcca 67  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  47473251 catgcctaaaaagatggctaattttaagtggatgttaggagcca 47473294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 44152772 - 44152814
Alignment:
Q  102 taccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  44152772 taccaactatgttatctataatatgacttgtttgaaacgattc 44152814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 20760367 - 20760400
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaat 243  Q
    ||||||||||||||||||||||||||||||||||    
T  20760367 cttaaaggacctttagatgcatttgacctaaaat 20760400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 20813738 - 20813771
Alignment:
Q  211 ttaaaggacctttagatgcatttgacctaaaata 244  Q
    ||||||||||||||||||||||||||||||||||    
T  20813738 ttaaaggacctttagatgcatttgacctaaaata 20813771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 52821357 - 52821393
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaatata 246  Q
    ||||||||||||||| |||||||||||||||||||||    
T  52821357 cttaaaggacctttaaatgcatttgacctaaaatata 52821393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 241
Target Start/End: Original strand, 1687858 - 1687889
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaa 241  Q
    ||||||||||||||||||||||||||||||||    
T  1687858 cttaaaggacctttagatgcatttgacctaaa 1687889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 21564370 - 21564339
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaa 241  Q
    ||||||||||||||||||||||||||||||||    
T  21564370 cttaaaggacctttagatgcatttgacctaaa 21564339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 241
Target Start/End: Original strand, 33151932 - 33151963
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaa 241  Q
    ||||||||||||||||||||||||||||||||    
T  33151932 cttaaaggacctttagatgcatttgacctaaa 33151963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 244
Target Start/End: Original strand, 20914051 - 20914085
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaata 244  Q
    |||||||||||||||||||||||||||| ||||||    
T  20914051 cttaaaggacctttagatgcatttgaccaaaaata 20914085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 244
Target Start/End: Original strand, 20922169 - 20922203
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaata 244  Q
    |||||||||||||||||||||||||||| ||||||    
T  20922169 cttaaaggacctttagatgcatttgaccaaaaata 20922203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 241
Target Start/End: Original strand, 31122870 - 31122900
Alignment:
Q  211 ttaaaggacctttagatgcatttgacctaaa 241  Q
    |||||||||||||||||||||||||||||||    
T  31122870 ttaaaggacctttagatgcatttgacctaaa 31122900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 19664386 - 19664357
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  19664386 cttaaaggacctttagatgcatttgaccta 19664357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 21656725 - 21656754
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  21656725 cttaaaggacctttagatgcatttgaccta 21656754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 29677683 - 29677716
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaat 243  Q
    |||||||||||||||||||||||||||| |||||    
T  29677683 cttaaaggacctttagatgcatttgaccaaaaat 29677716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 48651093 - 48651060
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaat 243  Q
    |||||||||| |||||||||||||||||||||||    
T  48651093 cttaaaggacatttagatgcatttgacctaaaat 48651060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 50287411 - 50287382
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  50287411 cttaaaggacctttagatgcatttgaccta 50287382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 1016918 - 1016890
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  1016918 cttaaaggacctttagatgcatttgacct 1016890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 1448669 - 1448641
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  1448669 cttaaaggacctttagatgcatttgacct 1448641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 1448999 - 1449031
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||| ||||    
T  1448999 cttaaaggacctttagatgcatttgaccaaaaa 1449031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 8097228 - 8097256
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  8097228 cttaaaggacctttagatgcatttgacct 8097256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 36315268 - 36315296
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  36315268 cttaaaggacctttagatgcatttgacct 36315296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 38446322 - 38446294
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  38446322 cttaaaggacctttagatgcatttgacct 38446294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 44152545 - 44152517
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  44152545 cttaaaggacctttagatgcatttgacct 44152517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 44152880 - 44152908
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  44152880 cttaaaggacctttagatgcatttgacct 44152908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 47329470 - 47329502
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    ||||||| |||||||||||||||||||||||||    
T  47329470 cttaaagaacctttagatgcatttgacctaaaa 47329502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 49799045 - 49799017
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  49799045 cttaaaggacctttagatgcatttgacct 49799017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 16246313 - 16246193
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  16246313 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 16246214  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  16246213 aggacttgtttgaaacgattc 16246193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 772099 - 771981
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  772099 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 772000  T
Q  120 caataggacttgtttgaaa 138  Q
    |||||||||||||||||||    
T  771999 caataggacttgtttgaaa 771981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 17134240 - 17134369
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  17134240 catcatttgccattcctaaaaagatgactacttttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgc 17134339  T
Q  114 tatctacaataggacttgtttgaaacgatt 143  Q
    ||||||||||||||||||||||||||||||    
T  17134340 tatctacaataggacttgtttgaaacgatt 17134369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 27328605 - 27328725
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  27328605 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 27328704  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  27328705 aggacttgtttgaaacgattc 27328725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 28650546 - 28650426
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  28650546 catgtctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagaaattaccaactatgctatctacaat 28650447  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  28650446 aggacttgtttgaaacgattc 28650426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 33865387 - 33865267
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33865387 catgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 33865288  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  33865287 aagacttgtttgaaacgattc 33865267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 41500626 - 41500502
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||    
T  41500626 ttgccatgcctaaaaagatgactaattttaagcgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatgta 41500527  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  41500526 caataggacttgtttgaaacgattc 41500502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 2056946 - 2057067
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2056946 ccatgcctaaaaagatgactaattttaagtgggtgttaggagctggatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaa 2057045  T
Q  123 taggacttgtttgaaacgattc 144  Q
    || |||||||||||||||||||    
T  2057046 taagacttgtttgaaacgattc 2057067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 921043 - 921163
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  921043 catgcataaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattatcaactatgctatctacaat 921142  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  921143 aggacttgtttgaaacgattc 921163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 33107089 - 33106969
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  33107089 catgcctaaaaagatgactaattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaagcaattaccaactatgatatctacaat 33106990  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||| ||||||||||||||    
T  33106989 aggactcgtttgaaacgattc 33106969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 37838318 - 37838438
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||    
T  37838318 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaagaagcaattaccaactatgctatctacaat 37838417  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  37838418 aggacttgtttgaaacgattc 37838438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 40854630 - 40854750
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  40854630 catgcctaaaaagatgactaattttaagtggatgttaggagccagatttgataccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 40854729  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  40854730 aggacttgtttgaaacgattc 40854750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 3430748 - 3430631
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  3430748 ttgccatgcctaaaaagatgactaattttaagtgggtgttatgagccagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatcta 3430649  T
Q  120 caataggacttgtttgaa 137  Q
    ||||||||||||||||||    
T  3430648 caataggacttgtttgaa 3430631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 11949546 - 11949426
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  11949546 catgcctaaaaagatgactaatattaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaaacaattaccaactatgctatctacaat 11949447  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  11949446 aggacttgtttgaaacgattc 11949426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 34253163 - 34253283
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  34253163 catgcctaaaaagatgactaatattaagtgggtgttaggagccagatttgataccaaagatgagttcaagaaagcaattaccaactatgctatctacaat 34253262  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  34253263 aggacttgtttgaaacgattc 34253283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 36211063 - 36211182
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  36211063 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaagaagcaattacaaactatgttatcta 36211162  T
Q  120 caataggacttgtttgaaac 139  Q
     |||||||||||||||||||    
T  36211163 gaataggacttgtttgaaac 36211182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 36444352 - 36444229
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  36444352 ttgccatgcttaaaaagatgactaattttaagtaggtgttatgagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 36444253  T
Q  120 caataggacttgtttgaaacgatt 143  Q
    | ||||||||||||||||||||||    
T  36444252 ctataggacttgtttgaaacgatt 36444229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 2315096 - 2314975
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  2315096 ccatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagatgagttcaaggaaacaattaccaactatgctatctacaa 2314997  T
Q  123 taggacttgtttgaaacgattc 144  Q
    || |||||||||||||| ||||    
T  2314996 taagacttgtttgaaacaattc 2314975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 1106679 - 1106559
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||    
T  1106679 catgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattaccaattatgctatctacaat 1106580  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||| ||||||| |||||    
T  1106579 aggacttatttgaaatgattc 1106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 2456031 - 2456151
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  2456031 catgcctaaaaagatgactaattttaagtgggtgttaggagttaaatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 2456130  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  2456131 aggacttgtttgaaacaattc 2456151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 7378984 - 7379104
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||| |    
T  7378984 catgcctaaaaagaggactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactattctatctacatt 7379083  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  7379084 atgacttgtttgaaacgattc 7379104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 9276595 - 9276715
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  9276595 catgcataaaaagatagctaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 9276694  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  9276695 aggacttgtttgaaacgattc 9276715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 8899702 - 8899822
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  8899702 ccatgcctaaaaagatgactagttttaagtgggtgttaggagccagatttggtaccaaagatgagttcatggaagcaattaccaactatgctatctacaa 8899801  T
Q  123 taggacttgtttgaaacgattc 144  Q
    || |||||| ||||||||||||    
T  8899802 tatgacttg-ttgaaacgattc 8899822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 17484671 - 17484550
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    |||||| ||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  17484671 ccatgcttaaaaagatgactaattttaagtggttgttaggagtcaaatttggtaccaaagatgagttcaaagaagcaattaccaactatgctatctacaa 17484572  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||    
T  17484571 taggacttgtttgaaacgattc 17484550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 2094534 - 2094410
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| |||| ||| ||||||| |||||||||||| |||||||||||||| ||||||    
T  2094534 ttgccatgcttaaaaagatgactaattttaagtgggtgtttggagccaaatttagtatcaaagattagttcaaggaagcaattaccaactatgctatcta 2094435  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  2094434 caataggacttgtttgaaacgattc 2094410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 7297354 - 7297234
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |   |||||||||||||| ||||||||||    
T  7297354 catgcctaaaaagatgactaattttaagtgggtgttaggagctagatttggtaccaaagatgagttcaagaagacaattaccaactatgctatctacaat 7297255  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  7297254 atgacttgtttgaaacgattc 7297234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 12759869 - 12759750
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||| || || ||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  12759869 catgcctaaaaagatgactaattttaagtgggtgttag-aggcaaatttggtacgaaaaatgagttcaaggaagcaattaccaactatgttatctacaat 12759771  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  12759770 aggacttgtttgaaacgattc 12759750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 19180443 - 19180562
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||||||||    
T  19180443 catgcctaaaaagatgactaattttaagtgggtgttag-agccagatttggtaccaaagatgagttcaaggaagcaattactaactatactatctacaat 19180541  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  19180542 aagacttgtttgaaacgattc 19180562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 25087916 - 25087796
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||| ||||||    
T  25087916 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttagtaccagagatgagttcaaggaagcaattatcaactatgttatatacaat 25087817  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||| ||||    
T  25087816 aagacttgtttgaaacaattc 25087796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 42629983 - 42630103
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||| |||| ||||||  ||    
T  42629983 catgcctaaaaagatgactaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaagaaagcaattatcaattatgctatctatgat 42630082  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  42630083 aggacttgtttgaaacgattc 42630103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 43249532 - 43249412
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||| ||||  ||||    
T  43249532 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgtattcaaggaaacaattaccaactatgctatcatcaat 43249433  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||| ||||||||||    
T  43249432 aggacttgttcgaaacgattc 43249412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 38751069 - 38751188
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||  |||||||| |    
T  38751069 catgcctaaaaagatgattaattttaagtggatgttaggagccacatttgataccaaagatgagttcaaggaagcaattaccaactatactatctacatt 38751168  T
Q  124 aggacttgtttgaaacgatt 143  Q
    ||||||||||||||||||||    
T  38751169 aggacttgtttgaaacgatt 38751188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 37654118 - 37654224
Alignment:
Q  13 tcatcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatg 112  Q
    |||||| ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37654118 tcatcatttgtcatgcctaaaaagatgactgattttaagtggatgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatg 37654217  T
Q  113 ttatcta 119  Q
    |||||||    
T  37654218 ttatcta 37654224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 37732307 - 37732193
Alignment:
Q  30 taaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggact 129  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||| |||||||||||||||||| ||||||| ||||    
T  37732307 taaaaagatgactaattttaagtgggtgttaggagtcagatttgataccaaaaatgagttcaagaaagcaattaccaactatgttatttacaataagact 37732208  T
Q  130 tgtttgaaacgattc 144  Q
    |||||||||||||||    
T  37732207 tgtttgaaacgattc 37732193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 29737769 - 29737889
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  29737769 catgcctaaaaagatgactaattttaaatggatcttaggagtcagatttggtaccaaagatgagttcaaggaagcaattatcaactatgctatcgacaat 29737868  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  29737869 aggacttgtttgaaacaattc 29737889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 14630663 - 14630755
Alignment:
Q  52 tgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  14630663 tgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaatatgacttgtttgaaacgattc 14630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 45124140 - 45124260
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| ||||||||||||||||||| ||| | |||||| ||||||||||||||| ||||||  |||||||||||||| ||||||||||    
T  45124140 catgcctaaaaagatgattaattttaagtgggtgttaagagtctgatttgataccaaagatgagtttaaggaaacaattaccaactatgctatctacaat 45124239  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | || ||||||||||||||||    
T  45124240 aagatttgtttgaaacgattc 45124260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 8396671 - 8396572
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  8396671 catgcctaaaaagatgactgattttaagtgggttttaggagccatatttggtaccaaagatgagttcaaggaagcaattatcaactatgctatctacaat 8396572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 41178140 - 41178059
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattac 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41178140 ccatgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattac 41178059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 54 - 144
Target Start/End: Complemental strand, 23671901 - 23671811
Alignment:
Q  54 ggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| |||| |||||||||||||||||||    
T  23671901 ggtgttaggagccagatttagtaccaaagatgagttcaaggaagcaattaccaaccatgttatctataataagacttgtttgaaacgattc 23671811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 19916104 - 19916008
Alignment:
Q  27 gcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  19916104 gcctaaaaagatgattgatattaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaaccaattaccaactatgctatctacaat 19916008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 9331777 - 9331897
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||| |||||||||  ||||| ||| ||||||||||||||||| |||||||||| ||||| |  ||  ||||| |||||||||| ||  ||||||||||    
T  9331777 catgcataaaaagatagctaatcttaggtgggtgttaggagccaaatttggtacctaagataatatctgggaagcaattaccaacaatactatctacaat 9331876  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  9331877 aggacttgtttgaaacgattc 9331897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 23672993 - 23672958
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgtt 59  Q
    ||||||||||||||||||||||||||||||||||||    
T  23672993 catgcctaaaaagatgactaattttaagtgggtgtt 23672958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 28650360 - 28650327
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaat 243  Q
    ||||||||||||||||||||||||||||||||||    
T  28650360 cttaaaggacctttagatgcatttgacctaaaat 28650327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 27328791 - 27328827
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaatata 246  Q
    |||||||||||||||||||||||||||||| ||||||    
T  27328791 cttaaaggacctttagatgcatttgacctataatata 27328827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 28217003 - 28216964
Alignment:
Q  105 caactatgttatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  28217003 caactatgttatctacaatatgacttgtttgaaacaattc 28216964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 920867 - 920833
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaata 244  Q
    ||||||||||||||||||||||||||||| |||||    
T  920867 cttaaaggacctttagatgcatttgaccttaaata 920833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 37732127 - 37732093
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaata 244  Q
    ||||||||||||||||||||||||||||| |||||    
T  37732127 cttaaaggacctttagatgcatttgaccttaaata 37732093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 2057132 - 2057161
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  2057132 cttaaaggacctttagatgcatttgaccta 2057161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 19180628 - 19180669
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaatatacaaag 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||    
T  19180628 cttaaaggacctttagacgcatttaacctaaaataaacaaag 19180669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 23671746 - 23671717
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  23671746 cttaaaggacctttagatgcatttgaccta 23671717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 37654301 - 37654330
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  37654301 cttaaaggacctttagatgcatttgaccta 37654330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 37838125 - 37838088
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaatatac 247  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  37838125 cttaaaggacctttagatacatttgacctataatatac 37838088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 37838504 - 37838533
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  37838504 cttaaaggacctttagatgcatttgaccta 37838533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 38750892 - 38750863
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  38750892 cttaaaggacctttagatgcatttgaccta 38750863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 771910 - 771874
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaatata 246  Q
    |||||||||||||||||||||||||||| | ||||||    
T  771910 cttaaaggacctttagatgcatttgaccaataatata 771874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 2094345 - 2094317
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  2094345 cttaaaggacctttagatgcatttgacct 2094317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 7297199 - 7297171
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  7297199 cttaaaggacctttagatgcatttgacct 7297171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 11949360 - 11949328
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||| ||||||||||||||||||||||    
T  11949360 cttaaaggacttttagatgcatttgacctaaaa 11949328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 20248118 - 20248086
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||| ||||||||||||||||||||||    
T  20248118 cttaaaggacttttagatgcatttgacctaaaa 20248086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 36211254 - 36211282
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  36211254 cttaaaggacctttagatgcatttgacct 36211282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 8e-56; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 29050291 - 29050413
Alignment:
Q  22 gccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctaca 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  29050291 gccatgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctaca 29050390  T
Q  122 ataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||    
T  29050391 ataggacttgtttgaaacgattc 29050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 30379037 - 30379158
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  30379037 ccatgcctaaaaagatgactaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaa 30379136  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||    
T  30379137 taggacttgtttgaaacgattc 30379158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 2707476 - 2707600
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  2707476 ttgccatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagacgagttcaaggaagcaattaccaactatgatatcta 2707575  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  2707576 caataggacttgtttgaaacgattc 2707600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 10256254 - 10256378
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  10256254 ttgcaatgcctaaaaagatgactaattttaagtgggtgttaggaaccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcta 10256353  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  10256354 caataggacttgtttgaaacgattc 10256378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 17428392 - 17428272
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17428392 catgcctaaaaagatgactaattttaagtggatgttaggagccagatttagtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 17428293  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  17428292 aggacttgtttgaaacgattc 17428272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 6503739 - 6503858
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  6503739 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgggttcaaggaagcaattaccaactatgatatctacaat 6503838  T
Q  124 aggacttgtttgaaacgatt 143  Q
    ||||||||||||||||||||    
T  6503839 aggacttgtttgaaacgatt 6503858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 2390286 - 2390406
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2390286 catgcctaaaaagatgactaattataagtgggtgttaggagctatatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaat 2390385  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  2390386 aggacttgtttgaaacgattc 2390406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 8178373 - 8178249
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  8178373 ttgccatgcttaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaattaccaactatgctatcta 8178274  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||||||| |||||||||||||||    
T  8178273 caataggacatgtttgaaacgattc 8178249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 12626653 - 12626777
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||  ||||||    
T  12626653 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagataagttcaaggaagcaattaccaactattctatcta 12626752  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  12626753 caataggacttgtttgaaacgattc 12626777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 1915463 - 1915343
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  1915463 catgcctaaaaagatgattaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatctacaat 1915364  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||| ||||    
T  1915363 aggacttgtttgaaactattc 1915343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 2598223 - 2598099
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| ||||||    
T  2598223 ttgccatgcctaaaaagatgagtaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaataaagcaattaccaactatgatatcta 2598124  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||||| |||||||||||||||||||    
T  2598123 caatatgacttgtttgaaacgattc 2598099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 3408210 - 3408330
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||||    
T  3408210 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaattaccaactatactatctacaat 3408309  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  3408310 atgacttgtttgaaacgattc 3408330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 9382540 - 9382660
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||      
T  9382540 catgcttaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacatc 9382639  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  9382640 aggacttgtttgaaacgattc 9382660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 17943057 - 17943177
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| |    
T  17943057 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagtttaaggaagcaattaccaattatgctatctacatt 17943156  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  17943157 aggacttgtttgaaacgattc 17943177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 26231052 - 26230932
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||| |    
T  26231052 catgcctaaaaagatgactaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaaggaagaaactaccaactatgttatttacatt 26230953  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  26230952 aggacttgtttgaaacgattc 26230932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 16193327 - 16193451
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||     
T  16193327 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtatcaaagatgagttcaaggaagcaattaccaactattttatctg 16193426  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    || ||| ||||||||||||||||||    
T  16193427 cattagaacttgtttgaaacgattc 16193451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 26393129 - 26393009
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  26393129 catgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 26393030  T
Q  124 aggacttgtttgaaacgattc 144  Q
    || | || |||||||||||||    
T  26393029 agaagttttttgaaacgattc 26393009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 1077254 - 1077378
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  1077254 ttgccatgcctaaaaagatgattaattttaagtgggtgttaggaaccagatttgataccaaagatgagttcaaggaagcaattaccaactatgctatcta 1077353  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    ||| | ||||| |||||||||||||    
T  1077354 caacatgacttatttgaaacgattc 1077378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 11133899 - 11134015
Alignment:
Q  29 ctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttc-aaggaagtaattaccaactatgttatctacaatagga 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||||||| ||||||    
T  11133899 ctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaaggaagcaattaccatctatgctatctacgatagga 11133998  T
Q  128 cttgtttgaaacgattc 144  Q
    |||||||||||||||||    
T  11133999 cttgtttgaaacgattc 11134015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 3258927 - 3258807
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattacc-aactatgttatctacaa 122  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  3258927 catgcataaaaagatgactaattttaagtgg-tgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaaactatggtatctacaa 3258829  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||| ||||||||||||||||||    
T  3258828 tagaacttgtttgaaacgattc 3258807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 6785218 - 6785101
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |   ||||| ||||||||||||| |    
T  6785218 catgactaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaatatgagttcaaggaagca---accaattatgttatctacatt 6785122  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  6785121 aggacttgtttgaaacgattc 6785101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 35224019 - 35223919
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  35224019 catgcctaaaaagatgactaattttaagtgggtgttaggagctagatttgataccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 35223920  T
Q  124 a 124  Q
    |    
T  35223919 a 35223919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 26196441 - 26196321
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattacc-aactatgttatctacaa 122  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  26196441 catgcctaaaaagatgattaattttaagtgt-tgttaggagccagatttagtaccaaagatgagttcacggaagcaattaccaaactatgttatctacaa 26196343  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||||||| ||||| ||||||    
T  26196342 taggacttggttgaaccgattc 26196321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 26936628 - 26936727
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||    
T  26936628 catgcctaaaaagatgactgattttaagtgggtgttaggagccggatttggtaccaaagatgagttcaaggaaacaattatcaactatgctatctacaat 26936727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 10931267 - 10931148
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||| ||  ||||| |||||||| |||| ||| |    
T  10931267 catgcctaaaaagatgactaattttaagcgggtgttagaagtcagatttggtaccaaagatgagttcaagaaaacaatta-caactatgctatccacatt 10931169  T
Q  124 aggacttgtttgaaacgattc 144  Q
    ||||||||||||| |||||||    
T  10931168 aggacttgtttgatacgattc 10931148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 31375971 - 31376058
Alignment:
Q  57 gttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  31375971 gttaggagccagatttggtaccaaagataagttcaaggaagcaattaacaactatgctatctacaataggacttgtttgaaacgattc 31376058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 25820669 - 25820550
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| ||||||  |||||||||||||| ||||||||| |||  ||||||||||||||| |||||||||| |||| |||||||||||||| ||||||| ||    
T  25820669 catgactaaaattatgactaattttaaatgggtgttatgagttagatttggtaccaaacatgagttcaatgaagcaattaccaactatgctatctacgat 25820570  T
Q  124 aggacttgtttgaaacgatt 143  Q
    |||| |||||||||||||||    
T  25820569 aggaattgtttgaaacgatt 25820550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 12613029 - 12612971
Alignment:
Q  86 agttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  12613029 agttcaaggaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 12612971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 12612927 - 12612848
Alignment:
Q  65 ccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    |||||||||||| ||||||||||||||| |||| || ||| |||| || ||||||||||||||||||||||||| |||||    
T  12612927 ccagatttggtagcaaagatgagttcaatgaagcaagtactaactttgctatctacaataggacttgtttgaaatgattc 12612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 2598034 - 2597998
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaatata 246  Q
    |||||||||||||||||||||||||||||| ||||||    
T  2598034 cttaaaggacctttagatgcatttgacctagaatata 2597998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 2707666 - 2707698
Alignment:
Q  210 cttaaaggacctttagatgcatttgacctaaaa 242  Q
    |||||||||||||||||||||||||||| ||||    
T  2707666 cttaaaggacctttagatgcatttgaccaaaaa 2707698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 12626843 - 12626871
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  12626843 cttaaaggacctttagatgcatttgacct 12626871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 26393305 - 26393333
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  26393305 cttaaaggacctttagatgcatttgacct 26393333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 135 - 255
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| |    
T  135 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccgactatgctatctacatt 234  T
Q  124 aggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||    
T  235 aggacttgtttgaaacgattc 255  T

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Target: scaffold1986; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 293 - 321
Alignment:
Q  210 cttaaaggacctttagatgcatttgacct 238  Q
    |||||||||||||||||||||||||||||    
T  293 cttaaaggacctttagatgcatttgacct 321  T

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Target: scaffold0004 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 218906 - 219027
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtggg-tgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  218906 catgcctaaaaagatgactaattttaagtggggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaattaccaactatgctatctacaa 219005  T
Q  123 taggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||    
T  219006 taggacttgtttgaaacgattc 219027  T

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Target: scaffold0005 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 252562 - 252438
Alignment:
Q  20 ttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatcta 119  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||| |||||||||||||| ||| ||    
T  252562 ttgccatgcctaaaaagatgactaattttaactgggtgttaggagccagatttggtacgaaaaatgagttcaatgaagcaattaccaactatgctatata 252463  T
Q  120 caataggacttgtttgaaacgattc 144  Q
    |||||||||||||||||||||||||    
T  252462 caataggacttgtttgaaacgattc 252438  T

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Target: scaffold0096 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 47983 - 48103
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| || ||||||    
T  47983 catgcctaaaaagatgactaattttaagtgggtgttaggaaccagatttggtaccaaaggtgagttcaaggaagcaattaccaactatgtgatatacaat 48082  T
Q  124 aggacttgtttgaaacgattc 144  Q
     |||||||||| |||||||||    
T  48083 cggacttgtttaaaacgattc 48103  T

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Target: scaffold0184 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 13106 - 13236
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| ||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||     
T  13106 catcatttgccatgcctaaaaagatgaataattttaagtggatattaggagctagatttggtaccaaagatgagttcaaggaaggaattatcaattatgc 13205  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||| |||||||||||||||||||    
T  13206 tatctacaatatgacttgtttgaaacgattc 13236  T

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Target: scaffold0078 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 59738 - 59608
Alignment:
Q  14 catcaattgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgt 113  Q
    ||||| ||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||     
T  59738 catcatttgccatgcctaaaaagatgaataattttaagtggatattaggagctagatttggtaccaaagatgagttcaaggaaggaattatcaattatgc 59639  T
Q  114 tatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||| |||||||||||||||||||    
T  59638 tatctacaatatgacttgtttgaaacgattc 59608  T

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Target: scaffold0693 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 5147 - 5027
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||    
T  5147 catgtctaaaaagatgactaattttaagagggtgttaggagccatatttggtaccaaagatgagttcaagaaaacaattaccaactatgctatctacaat 5048  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  5047 atgacttgtttgaaacgattc 5027  T

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Target: scaffold0727 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 5207 - 5326
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| ||| |||| |||||||||     
T  5207 catgcctaaaaagatgactaattttaagtgg-tgttaggagccagatttggtatcaaagatgagttcaaggaagcaattaacaattatgctatctacaac 5305  T
Q  124 aggacttgtttgaaacgattc 144  Q
    | |||||||||||||||||||    
T  5306 atgacttgtttgaaacgattc 5326  T

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Target: scaffold0122 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 11378 - 11498
Alignment:
Q  23 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| |||||||||||||| || ||||||    
T  11378 ccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccatagataagtttaaggaagcaattaccaactatgctacctacaa 11477  T
Q  123 taggacttgtttgaaacgatt 143  Q
    |||| ||| ||| ||||||||    
T  11478 taggtcttatttaaaacgatt 11498  T

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Target: scaffold0542 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 2093 - 1994
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaat 123  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  2093 catgcctaataagatgactgattttaagtaggtgttaggagccagattcggtaccaaagatgagttcaaggaagcaattaccaactatgctatctacaat 1994  T

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Target: scaffold1562 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 599 - 680
Alignment:
Q  63 agccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||| ||||||||||||||||||||||    
T  599 agccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctattaacattaggacttgtttgaaacgattc 680  T

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Target: scaffold1158 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 1994 - 1913
Alignment:
Q  63 agccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||| ||||||||||||||||||||||    
T  1994 agccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctattaacattaggacttgtttgaaacgattc 1913  T

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Target: scaffold0952 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 3452 - 3371
Alignment:
Q  63 agccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||| |||||||||||||    
T  3452 agccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctatcaacattaggacttatttgaaacgattc 3371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 1877 - 1958
Alignment:
Q  63 agccagatttggtaccaaagatgagttcaaggaagtaattaccaactatgttatctacaataggacttgtttgaaacgattc 144  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||| |||| ||| ||||||||||||||||||||||    
T  1877 agccagatttggtaccaaagatgaggtcaaggaagcaattatcaactatgctatcaacattaggacttgtttgaaacgattc 1958  T

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Target: scaffold0130 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 19802 - 19831
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtg 53  Q
    ||||||||||||||||||||||||||||||    
T  19802 catgcctaaaaagatgactaattttaagtg 19831  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 14523 - 14494
Alignment:
Q  210 cttaaaggacctttagatgcatttgaccta 239  Q
    ||||||||||||||||||||||||||||||    
T  14523 cttaaaggacctttagatgcatttgaccta 14494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 321 - 289
Alignment:
Q  24 catgcctaaaaagatgactaattttaagtgggt 56  Q
    ||||||||||||||||| |||||||||||||||    
T  321 catgcctaaaaagatgaataattttaagtgggt 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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