View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18579_low_6 (Length: 471)

Name: NF18579_low_6
Description: NF18579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18579_low_6
NF18579_low_6
[»] chr3 (28 HSPs)
chr3 (270-453)||(22226125-22226308)
chr3 (113-261)||(25996267-25996415)
chr3 (110-261)||(4190215-4190366)
chr3 (110-261)||(10457842-10457993)
chr3 (110-241)||(51757612-51757743)
chr3 (110-260)||(34791829-34791979)
chr3 (110-261)||(9434123-9434274)
chr3 (119-261)||(52627936-52628078)
chr3 (17-68)||(22226062-22226113)
chr3 (161-261)||(25413680-25413780)
chr3 (172-260)||(42100688-42100776)
chr3 (161-261)||(46941052-46941152)
chr3 (161-258)||(27748565-27748662)
chr3 (161-218)||(51249350-51249407)
chr3 (161-260)||(36150130-36150229)
chr3 (166-260)||(45126934-45127028)
chr3 (160-261)||(53273684-53273785)
chr3 (161-261)||(40808864-40808964)
chr3 (161-261)||(47191027-47191126)
chr3 (161-261)||(54246149-54246249)
chr3 (77-140)||(27748683-27748746)
chr3 (175-261)||(29558249-29558335)
chr3 (161-259)||(54237097-54237195)
chr3 (161-261)||(24688403-24688503)
chr3 (161-259)||(40480750-40480848)
chr3 (161-259)||(42394420-42394518)
chr3 (161-207)||(52629881-52629927)
chr3 (155-207)||(19148832-19148884)
[»] chr1 (20 HSPs)
chr1 (110-260)||(35003294-35003444)
chr1 (110-260)||(48119628-48119778)
chr1 (116-260)||(38335918-38336062)
chr1 (110-261)||(45639682-45639833)
chr1 (110-261)||(26585461-26585612)
chr1 (110-261)||(38113145-38113296)
chr1 (110-261)||(44112676-44112827)
chr1 (77-261)||(45427653-45427846)
chr1 (110-261)||(45705824-45705975)
chr1 (110-260)||(46168383-46168533)
chr1 (77-260)||(35000021-35000213)
chr1 (77-261)||(41065152-41065343)
chr1 (161-260)||(37814778-37814877)
chr1 (161-260)||(43571087-43571186)
chr1 (166-222)||(2497568-2497624)
chr1 (161-222)||(48498963-48499024)
chr1 (161-261)||(5489775-5489875)
chr1 (209-261)||(14427346-14427398)
chr1 (161-222)||(4401366-4401427)
chr1 (161-261)||(23989524-23989625)
[»] chr6 (18 HSPs)
chr6 (77-261)||(33242402-33242595)
chr6 (110-258)||(27441544-27441692)
chr6 (77-260)||(33253913-33254106)
chr6 (110-261)||(31109172-31109323)
chr6 (161-261)||(3213399-3213499)
chr6 (161-261)||(26670010-26670110)
chr6 (161-261)||(7273336-7273436)
chr6 (161-261)||(21293678-21293778)
chr6 (166-261)||(7367548-7367643)
chr6 (161-260)||(13743222-13743321)
chr6 (161-260)||(13748722-13748821)
chr6 (161-261)||(7292746-7292846)
chr6 (161-261)||(9698334-9698434)
chr6 (166-258)||(24203993-24204085)
chr6 (161-261)||(26466798-26466898)
chr6 (161-260)||(30014343-30014442)
chr6 (161-207)||(21279982-21280028)
chr6 (161-222)||(30736020-30736081)
[»] chr4 (34 HSPs)
chr4 (110-261)||(711959-712110)
chr4 (110-260)||(17619102-17619252)
chr4 (77-260)||(55272284-55272476)
chr4 (77-261)||(32728356-32728549)
chr4 (110-258)||(35037007-35037155)
chr4 (77-223)||(19879991-19880146)
chr4 (110-258)||(38851515-38851663)
chr4 (110-261)||(960820-960971)
chr4 (110-261)||(48435529-48435680)
chr4 (110-258)||(3756202-3756344)
chr4 (110-261)||(46827656-46827807)
chr4 (132-218)||(36004088-36004174)
chr4 (161-261)||(23035979-23036079)
chr4 (161-261)||(33703140-33703240)
chr4 (161-230)||(39631131-39631200)
chr4 (161-222)||(45490314-45490375)
chr4 (180-261)||(49229684-49229765)
chr4 (173-261)||(28982835-28982923)
chr4 (161-261)||(28988472-28988572)
chr4 (161-260)||(27316714-27316813)
chr4 (161-260)||(27550309-27550408)
chr4 (166-261)||(27864563-27864658)
chr4 (161-228)||(43949802-43949869)
chr4 (166-261)||(48463456-48463551)
chr4 (161-259)||(41878407-41878505)
chr4 (172-261)||(1771278-1771367)
chr4 (161-222)||(27893843-27893904)
chr4 (161-222)||(31680940-31681001)
chr4 (172-261)||(55966358-55966447)
chr4 (161-260)||(35017733-35017831)
chr4 (172-258)||(43514698-43514784)
chr4 (79-115)||(960753-960789)
chr4 (161-261)||(25051692-25051792)
chr4 (161-241)||(41327544-41327624)
[»] chr2 (25 HSPs)
chr2 (77-261)||(18491704-18491897)
chr2 (77-261)||(43114556-43114749)
chr2 (110-258)||(11825604-11825752)
chr2 (110-261)||(966784-966935)
chr2 (110-258)||(41281924-41282072)
chr2 (110-236)||(4451900-4452026)
chr2 (110-258)||(4299370-4299518)
chr2 (77-260)||(12415368-12415560)
chr2 (77-260)||(12427428-12427620)
chr2 (110-241)||(14285695-14285826)
chr2 (77-261)||(34895649-34895842)
chr2 (110-241)||(12531613-12531743)
chr2 (110-261)||(16803967-16804118)
chr2 (110-261)||(16843249-16843400)
chr2 (161-261)||(30838631-30838731)
chr2 (161-238)||(13780736-13780813)
chr2 (161-260)||(1750414-1750513)
chr2 (161-259)||(34817777-34817875)
chr2 (161-261)||(4764727-4764827)
chr2 (161-261)||(12302254-12302354)
chr2 (161-261)||(43335764-43335864)
chr2 (161-260)||(16096747-16096846)
chr2 (110-144)||(6518444-6518478)
chr2 (161-259)||(19047158-19047256)
chr2 (175-240)||(6518484-6518549)
[»] scaffold0003 (1 HSPs)
scaffold0003 (110-258)||(45669-45817)
[»] chr5 (11 HSPs)
chr5 (110-261)||(17208073-17208224)
chr5 (110-260)||(32473344-32473494)
chr5 (77-261)||(30622627-30622819)
chr5 (161-260)||(41334664-41334763)
chr5 (161-261)||(7617132-7617232)
chr5 (161-261)||(18033981-18034081)
chr5 (161-261)||(33801468-33801568)
chr5 (161-261)||(38470578-38470678)
chr5 (161-260)||(2614650-2614749)
chr5 (161-260)||(22512305-22512404)
chr5 (161-222)||(5257033-5257094)
[»] chr7 (22 HSPs)
chr7 (77-260)||(31513287-31513479)
chr7 (110-259)||(31408583-31408732)
chr7 (77-261)||(40236918-40237111)
chr7 (110-261)||(27535181-27535332)
chr7 (110-261)||(33384869-33385021)
chr7 (161-261)||(35069720-35069820)
chr7 (161-258)||(4638200-4638297)
chr7 (166-258)||(44326180-44326272)
chr7 (161-258)||(10573751-10573848)
chr7 (161-261)||(5194232-5194332)
chr7 (161-222)||(5015433-5015494)
chr7 (161-260)||(5810925-5811024)
chr7 (161-260)||(24001013-24001112)
chr7 (161-260)||(42538432-42538531)
chr7 (172-222)||(42972890-42972940)
chr7 (161-222)||(32029818-32029879)
chr7 (161-222)||(38160580-38160641)
chr7 (161-230)||(43343625-43343694)
chr7 (161-230)||(44416935-44417004)
chr7 (161-222)||(45326058-45326119)
chr7 (161-241)||(27393261-27393341)
chr7 (161-261)||(43317442-43317542)
[»] chr8 (25 HSPs)
chr8 (110-261)||(35181515-35181666)
chr8 (77-218)||(10678060-10678210)
chr8 (110-261)||(18066668-18066819)
chr8 (110-261)||(34304787-34304938)
chr8 (112-261)||(16603578-16603727)
chr8 (113-241)||(16358786-16358914)
chr8 (110-258)||(33629943-33630091)
chr8 (109-190)||(19386514-19386595)
chr8 (166-258)||(20148762-20148854)
chr8 (161-222)||(2547034-2547095)
chr8 (161-258)||(42295197-42295294)
chr8 (166-258)||(42699259-42699351)
chr8 (161-261)||(5754902-5755002)
chr8 (161-261)||(36743484-36743584)
chr8 (161-260)||(11582766-11582865)
chr8 (161-260)||(29705362-29705461)
chr8 (161-222)||(29800951-29801012)
chr8 (173-258)||(30912575-30912660)
chr8 (161-222)||(40528635-40528696)
chr8 (161-223)||(31384701-31384763)
chr8 (161-218)||(3743813-3743870)
chr8 (161-210)||(9241602-9241651)
chr8 (161-222)||(26125673-26125734)
chr8 (225-261)||(10678205-10678241)
chr8 (161-261)||(42197436-42197536)
[»] scaffold0100 (1 HSPs)
scaffold0100 (110-260)||(35406-35556)
[»] scaffold0119 (1 HSPs)
scaffold0119 (161-261)||(684-784)
[»] scaffold0385 (1 HSPs)
scaffold0385 (161-261)||(11250-11350)
[»] scaffold0187 (2 HSPs)
scaffold0187 (161-261)||(14189-14289)
scaffold0187 (161-261)||(24517-24617)
[»] scaffold0038 (1 HSPs)
scaffold0038 (161-259)||(112656-112754)


Alignment Details
Target: chr3 (Bit Score: 160; Significance: 4e-85; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 270 - 453
Target Start/End: Original strand, 22226125 - 22226308
Alignment:
Q  270 aaaacaaatttaacctatggttggtttcccacatagtacctatcgtatatataatggtattatactattactacactccaaatatacatagttgcacttc 369  Q
    |||| ||||||| ||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22226125 aaaaaaaatttagcctagtgttggtttcccacatagtacctaccgtatatataatggtattatactattactacactccaaatatacatagttgcacttc 22226224  T
Q  370 attgtatatgtaatttcctcacagatccctacatcacatacactcatatcattcatttctctctctcatcaatcgcctatatcc 453  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22226225 attgtatatgtaatttcctcacagatccctacatcacatacactcatatcattcatttctctctctcatcaatcacctatatcc 22226308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 25996415 - 25996267
Alignment:
Q  113 acccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatga 212  Q
    |||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||     
T  25996415 acccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaaatatggttgtgagatgaatttaccaaaatgtccttaatatatgg 25996316  T
Q  213 ggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||| |||||||||||||||  ||||| ||||||||||||    
T  25996315 ggtgtacaataagatgtatgattaaagggtgttcatgtaacattttcct 25996267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 4190215 - 4190366
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||| |    
T  4190215 tacacccacacaaaatcctgacatgtggcaaggaaaagggaaaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatctctaataca 4190314  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    | |||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  4190315 taaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 4190366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 10457842 - 10457993
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||  |    
T  10457842 tacatccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagataaatttaccaaaatatccttaatgca 10457941  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || ||||||||||| |||||||||||||| ||  ||||| ||||||||||||    
T  10457942 tggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcct 10457993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 110 - 241
Target Start/End: Complemental strand, 51757743 - 51757612
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| ||||  |    
T  51757743 tacacccacacacaatcctgacatgtggcaaggaaaaggaagaggagatgaaagagaaagtatggttgtgagatgaaattactaaaatgtccataatgca 51757644  T
Q  210 tgaggtgtacaataaggtgtatgattaaaggg 241  Q
    |||||||||||||| |||||||||||||||||    
T  51757643 tgaggtgtacaatagggtgtatgattaaaggg 51757612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 110 - 260
Target Start/End: Complemental strand, 34791979 - 34791829
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||| ||| ||||  |    
T  34791979 tacatccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaaattattaaaatgtccctaatgca 34791880  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||||| ||||||| |||||||||||||||||  ||||| |||||||||||    
T  34791879 tgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 9434274 - 9434123
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||||||||| || ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||| ||||| ||| ||||  |    
T  9434274 tacacccacacaaaattctgacatgtggcaaggaaaagtgagaggagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgca 9434175  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || |||||||||||  ||||||||||||||||  ||||| ||||||||||||    
T  9434174 tggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 9434123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 119 - 261
Target Start/End: Original strand, 52627936 - 52628078
Alignment:
Q  119 acaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgta 218  Q
    |||||||||| ||||||||| ||||||||| ||||  |||||||||||||||||| ||||||||||||||||| ||||||| ||||||  ||||||||||    
T  52627936 acaaaatcctgacatgtggccaggaaaagggagagaagatgaaagagaaagtatgattgtgagatgaatttaccaaaatatacttaatgcatgaggtgta 52628035  T
Q  219 caataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||| | |||||||||||||||  ||||  ||||||||||||    
T  52628036 caataggatgtatgattaaagggtgttcacgtaacattttcct 52628078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 22226062 - 22226113
Alignment:
Q  17 ggtttgaaaaattagtctttgcaattgcatgcacacgatagtcgattctcat 68  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22226062 ggttcgaaaaattagtctttgcaattgcatgcacacgatagtcgattctcat 22226113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 25413780 - 25413680
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| || |||||||||||  |||||| || |||||||  ||||| |||||||||||    
T  25413780 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 25413681  T
Q  261 t 261  Q
    |    
T  25413680 t 25413680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 42100776 - 42100688
Alignment:
Q  172 tggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    ||||||||||||||| |||| ||||||||| ||||| ||| |||||||||| ||||||| || |||||||  ||||| |||||||||||    
T  42100776 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 46941152 - 46941052
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| |||||||||| || |||| || |||||||  ||||| |||||||||||    
T  46941152 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcc 46941053  T
Q  261 t 261  Q
    |    
T  46941052 t 46941052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 27748662 - 27748565
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    |||| ||||||| ||||||||||||| |||| ||||||||| ||||| || ||||||| ||| |||||||||| |||| ||  ||||| |||||||||    
T  27748662 aagataaagtattgttgtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 51249407 - 51249350
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgta 218  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||    
T  51249407 aagagaaagtgtggttgtgagatgaatttaccaaaatatccttaatgcatgaggtgta 51249350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 36150229 - 36150130
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| | ||| ||  |||||| |||  ||||||||| ||||||| |||||| |||||||||||    
T  36150229 aagataaagtgtggttgtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 45126934 - 45127028
Alignment:
Q  166 aaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||  | ||||||| |||||||  || || |||||||||||    
T  45126934 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 53273684 - 53273785
Alignment:
Q  160 aaagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttc 259  Q
    ||||| ||||||||||||||||||||| |||| ||||||||| ||||| ||| | |||||||| |||| || || |||| |   ||||| ||||||||||    
T  53273684 aaagataaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttc 53273783  T
Q  260 ct 261  Q
    ||    
T  53273784 ct 53273785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 40808964 - 40808864
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||  |||||| || |||| ||  || || |||||||||||    
T  40808964 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcc 40808865  T
Q  261 t 261  Q
    |    
T  40808864 t 40808864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 47191027 - 47191126
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||  ||||||||  ||||| ||| |||||||||| ||||||| || |||||||  ||||| |||||||||||    
T  47191027 aagataaagtgtggttgtgagatgaacttatcaaaatatctctaatacatg-ggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 47191125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 54246149 - 54246249
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||  ||||| ||  ||||||||||  |||||| || |||||||  ||||| |||||||||||    
T  54246149 aagataaagtgtggttgtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 54246248  T
Q  261 t 261  Q
    |    
T  54246249 t 54246249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 27748746 - 27748683
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacccacacaaaatccttacatgtggcaa 140  Q
    |||||||||| |||||||  || |||||||||||||||| ||||||||| || |||||||||||    
T  27748746 gagtggtgatacatgtaccaccccatgtggcaatacaccgacacaaaattctgacatgtggcaa 27748683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 29558249 - 29558335
Alignment:
Q  175 ttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||||||| || |||| | ||||||||  |||||||||| || ||||||| |||||||  ||||| ||||||| ||||    
T  29558249 ttgtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacattgtcct 29558335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 54237195 - 54237097
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttc 259  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  | |||| || |||||||  ||||| ||||||||||    
T  54237195 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 24688403 - 24688503
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||   |||||  | |||||||  ||||| |||||||||||    
T  24688403 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 24688502  T
Q  261 t 261  Q
    |    
T  24688503 t 24688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 40480848 - 40480750
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttc 259  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  | ||||||||  ||  ||||| |||||||  ||||| ||||||||||    
T  40480848 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 42394420 - 42394518
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttc 259  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||    |||| || |||||||  ||||| ||||||||||    
T  42394420 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 52629927 - 52629881
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaata 207  Q
    |||| ||||| ||||||||||||||| |||| |||||||||||||||    
T  52629927 aagataaagtgtggttgtgagatgaacttacaaaaatatccttaata 52629881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 19148884 - 19148832
Alignment:
Q  155 ggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaata 207  Q
    ||||||||| |||||| || ||||||||| ||||||||||||| ||| |||||    
T  19148884 ggatgaaagtgaaagtgtgattgtgagataaatttactaaaatgtccctaata 19148832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 8e-56; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 110 - 260
Target Start/End: Complemental strand, 35003444 - 35003294
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  35003444 tacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgta 35003345  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    || ||||||||||| |||||||||||||||||  ||||| |||||||||||    
T  35003344 tggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 110 - 260
Target Start/End: Complemental strand, 48119778 - 48119628
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||  |    
T  48119778 tacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgca 48119679  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    || ||||||||||| |||||||||||||||||  ||||| |||||||||||    
T  48119678 tggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 116 - 260
Target Start/End: Complemental strand, 38336062 - 38335918
Alignment:
Q  116 cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggt 215  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| | |    
T  38336062 cacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatgggat 38335963  T
Q  216 gtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||    
T  38335962 gtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 45639682 - 45639833
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||| ||    
T  45639682 tacacccacacaaaatcctaacatgtggcaaggaaaagggagaggagatgaaagagaaagtatgattgtgagatgaatttaccaaaatatccttaatgta 45639781  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || ||||||||||| | ||||||||||||| |  ||||| ||||||||||||    
T  45639782 tggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcct 45639833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 26585612 - 26585461
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||  |    
T  26585612 tacatccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatgattgcgagatgaatttactaaaatatccttaatgca 26585513  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || |||||||||||  ||||||||||||||    ||||||||||||||||||    
T  26585512 tggggtgtacaatatagtgtatgattaaagaatgttcatctaacattttcct 26585461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 38113145 - 38113296
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||| || |||||  |    
T  38113145 tacacccacacaaaatcctgacatgtggcaaagaaaagggagaggagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgtcattaatgca 38113244  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || ||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  38113245 tggggtgtacaatagggtgtatgattaaagggtgttcatataacattttcct 38113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 44112827 - 44112676
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||||||||| || ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||| ||||| ||| ||||  |    
T  44112827 tacacccacacaaaattctgacatgtggcaaggaaaagtgagaggagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgca 44112728  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || ||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  44112727 tggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 44112676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 77 - 261
Target Start/End: Original strand, 45427653 - 45427846
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| |||||||| || ||||||||||||||||         ||||||||||||| |||||||| |||||||||| ||||| ||||||||||||    
T  45427653 gagtggtgatacatgtacatccccatgtggcaatacacctcttccatccacacaaaatcctgacatgtggtaaggaaaagggagaggagatgaaagagaa 45427752  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||||||||| |||| ||||| ||| ||||  |||  |||||||||| |||||||||||||| || |||||| ||||||||||||    
T  45427753 agtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttcct 45427846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 45705975 - 45705824
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  ||||| ||| ||||  |    
T  45705975 tacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgca 45705876  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||  ||||||||||   |||||||||||||||  ||||| ||||||||||||    
T  45705875 tggagtgtacaatagaatgtatgattaaagggtgttcatataacattttcct 45705824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 110 - 260
Target Start/End: Complemental strand, 46168533 - 46168383
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||  | |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||  |    
T  46168533 tacacccacacaaaattatgacatgtggcaagaaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgca 46168434  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |  ||||||||||| | | |||||||||||||  ||||| |||||||||||    
T  46168433 ttgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 35000021 - 35000213
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaataca---------cccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||         |||| |||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  35000021 gagtggtgatacatgtacacccccatgtggcaatacatctcttacacccatacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaa 35000120  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||||||||||||||| ||||||  ||||| ||| ||||| |||| || |||||||  ||||||||||||| ||  ||||| |||||||||||    
T  35000121 agtatggttgtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 77 - 261
Target Start/End: Complemental strand, 41065343 - 41065152
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    ||||||||||  |||||||||| ||||||||||||||||         | ||||||||||| |||||||||||||||||||  |||| || |||||||||    
T  41065343 gagtggtgatatatgtacacccccatgtggcaatacacctcttacatccgcacaaaatcctgacatgtggcaaggaaaagg--gaggagaggaaagagaa 41065246  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||||||||| |||| |||||  || ||||  ||| ||||||||| | |||||||||||||||||  ||||| ||||||||||||    
T  41065245 agtatggttgtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttcct 41065152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 37814877 - 37814778
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||| |||||||||| ||||||||||||||| ||| |||||||||| || ||||||| |||||||  || || |||||||||||    
T  37814877 aagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 43571087 - 43571186
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| |||||||||| ||||||| || |||||||  ||||| |||||||||||    
T  43571087 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 2497568 - 2497624
Alignment:
Q  166 aaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  2497568 aaagtgtggttgtgagatgaacttaccaaaatatccttaatatatggggtgtacaat 2497624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 48498963 - 48499024
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||||||||||||||    
T  48498963 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaat 48499024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 5489875 - 5489775
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  | |||| || |||||||  ||||| |||||||||||    
T  5489875 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 5489776  T
Q  261 t 261  Q
    |    
T  5489775 t 5489775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 14427398 - 14427346
Alignment:
Q  209 atgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  14427398 atgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 14427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 4401427 - 4401366
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||||||||||| |||| ||||||||  ||||| ||| ||||||||||    
T  4401427 aagataaagtgtggttgtgagatgaacttaccaaaatatctctaatacatggggtgtacaat 4401366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 23989524 - 23989625
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatg-attaaagggcattcatctaacattttc 259  Q
    |||| ||||| |||||||||||| ||||||| ||||||||| ||||| ||  ||| ||||||   ||||||| || ||||||  ||||| ||||||||||    
T  23989524 aagataaagtgtggttgtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttc 23989623  T
Q  260 ct 261  Q
    ||    
T  23989624 ct 23989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 7e-53; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 77 - 261
Target Start/End: Complemental strand, 33242595 - 33242402
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||||         ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  33242595 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaa 33242496  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |||||| ||||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||| ||  ||||| ||||||||||||    
T  33242495 agtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcct 33242402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 110 - 258
Target Start/End: Complemental strand, 27441692 - 27441544
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  27441692 tacacccacataaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaataca 27441593  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    |  | ||||||||| |||||||||||||||||  ||||| |||||||||    
T  27441592 taggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 33254106 - 33253913
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaa-gaga 166  Q
    |||||||||| ||||||||||  ||||||||||||||||         ||||||||||||  ||||||||||| ||||||| ||||| ||||||| || |    
T  33254106 gagtggtgatacatgtacacctccatgtggcaatacaccttttatacccacacaaaatccggacatgtggcaaagaaaagggagaggagatgaaaagata 33254007  T
Q  167 aagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    ||||||| ||||||||||||||||| || || ||| ||||  ||| ||||||||||| ||||| |||||||| ||  ||||| |||||||||||    
T  33254006 aagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 31109172 - 31109323
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||| | |||| || || ||||||||  ||||||||| || |  |    
T  31109172 tacacccacacaaaatcctgacatgtggcaaggaagagggagaggagatgaaagagaaaatgtggtcgtaagttgaatttatcaaaatatccctagtgca 31109271  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || |||||| |||  | |||||||||||||||  ||||| ||||||||||||    
T  31109272 tggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcct 31109323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 3213499 - 3213399
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||||| || ||||||| |||||||  || || |||||||||||    
T  3213499 aagataaagtatggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 3213400  T
Q  261 t 261  Q
    |    
T  3213399 t 3213399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 26670010 - 26670110
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| |||||||||||||| ||||||| || |||||||  ||||| |||||||||||    
T  26670010 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 26670109  T
Q  261 t 261  Q
    |    
T  26670110 t 26670110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 7273336 - 7273436
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| || |||||||||||| |||| ||||||||  ||||| ||| |||||||||||||||||| || |||||||  ||||| |||||||||||    
T  7273336 aagataaagtgtgattgtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcc 7273435  T
Q  261 t 261  Q
    |    
T  7273436 t 7273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 21293678 - 21293778
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||| |||||||||| ||||||||||||||| ||| |||||||| | |  ||||||| |||||||  || || |||||||||||    
T  21293678 aagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcc 21293777  T
Q  261 t 261  Q
    |    
T  21293778 t 21293778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 7367643 - 7367548
Alignment:
Q  166 aaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||| ||| | |||||||| |||||||||| |||| |   ||||| ||||||||||||    
T  7367643 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcct 7367548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 13743222 - 13743321
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||  | ||||||| |||| ||  ||||| |||||||||||    
T  13743222 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 13748722 - 13748821
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||  | ||||||| |||| ||  ||||| |||||||||||    
T  13748722 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 7292846 - 7292746
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  |||||| ||| |||||||||| |||| ||  ||| | |||||||||||    
T  7292846 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcc 7292747  T
Q  261 t 261  Q
    |    
T  7292746 t 7292746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 9698334 - 9698434
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  | |||| || |||||||  ||||| |||||||||||    
T  9698334 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 9698433  T
Q  261 t 261  Q
    |    
T  9698434 t 9698434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 24203993 - 24204085
Alignment:
Q  166 aaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||| |||  |||||||||| |||||| || |||| ||  ||||| |||||||||    
T  24203993 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 26466898 - 26466798
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| |||||| || ||||| |||  |||||||||  |||||| || |||||||  || || |||||||||||    
T  26466898 aagataaagtgtggttgtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcc 26466799  T
Q  261 t 261  Q
    |    
T  26466798 t 26466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 30014442 - 30014343
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||||||||||||||||||| |||| ||||||| | ||||| ||| | |||| |||  | |||| || |||||||  ||||| |||||||||||    
T  30014442 aagataaagtatggttgtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 21280028 - 21279982
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaata 207  Q
    |||| ||||| |||||||||||||||||||| ||||||||| |||||    
T  21280028 aagataaagtgtggttgtgagatgaatttaccaaaatatccctaata 21279982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 30736081 - 30736020
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| || |||||||||||| |||| ||||||||  ||||| ||||||||||||||    
T  30736081 aagataaagtgtgattgtgagatgaacttaccaaaatatcactaatacatgaggtgtacaat 30736020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 712110 - 711959
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||  |    
T  712110 tacacccacacaaaatcctgacatgtggcaaggaaaaggaagaggagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatatccttaatgca 712011  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |  ||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  712010 tagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 711959  T

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Target: chr4; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 110 - 260
Target Start/End: Original strand, 17619102 - 17619252
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||  |    
T  17619102 tacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgca 17619201  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    || ||||||||||| |||||||||||||| ||  ||||| |||||||||||    
T  17619202 tggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

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Target: chr4; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 55272284 - 55272476
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaataca---------cccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||         ||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  55272284 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaa 55272383  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||  |||||||||||||||   ||||| |||||||||||    
T  55272384 agtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

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Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 77 - 261
Target Start/End: Complemental strand, 32728549 - 32728356
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||||         |||| |||||| | | ||||||||||||||||| ||||| ||||||||||||    
T  32728549 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacgcacaaaaaatcttaatatgtggcaaggaaaagggagaggagatgaaagagaa 32728450  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |||||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||| ||||||||||||||||   ||||| ||||||||||||    
T  32728449 agtatgattgtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcct 32728356  T

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Target: chr4; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 110 - 258
Target Start/End: Complemental strand, 35037155 - 35037007
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| || |||||| ||| |||||||||||||||||||||| ||||||||||||||  |    
T  35037155 tacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagaagaaagaaaaaatatggttgtgagatgaatttaccaaaatatccttaatgca 35037056  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    || |||||||||||  ||||||| ||||||||   |||| |||||||||    
T  35037055 tggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttt 35037007  T

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Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 223
Target Start/End: Complemental strand, 19880146 - 19879991
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||||         ||||||||||||| ||||||||||||||||||| | ||| ||||||||||||    
T  19880146 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaaggaaaagggaaaggagatgaaagagaa 19880047  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaata 223  Q
    |||||| ||||||||||||||||| ||||| ||| ||||||||| |||||||||||    
T  19880046 agtatgattgtgagatgaatttaccaaaatgtccataatatatggggtgtacaata 19879991  T

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Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 258
Target Start/End: Complemental strand, 38851663 - 38851515
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  ||||| ||| ||||  |    
T  38851663 tacatccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgca 38851564  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    ||  ||||||| || | ||||||||||||||  |||||| |||||||||    
T  38851563 tggagtgtacattatgatgtatgattaaaggatattcatgtaacatttt 38851515  T

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Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 960820 - 960971
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||| | || | |||||||||||| ||||| ||| |||| ||    
T  960820 tacacccacacaaaatcctgacatgtggcaaggaaaagggataggagatgaaagagaaagtacgattataagatgaatttaccaaaatgtccctaatgta 960919  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |  |||||||||||  ||||||||||||||||  ||||| ||||||||||||    
T  960920 tagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 960971  T

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Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 48435529 - 48435680
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||| || || ||| ||||  |    
T  48435529 tacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgca 48435628  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || ||||||||||| ||||| |||||||| ||  ||||| ||||| ||||||    
T  48435629 tggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcct 48435680  T

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Target: chr4; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 3756202 - 3756344
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||| |||||| | |||||||||||||||||||||||     ||||||| |||||||| ||||||||| ||||||||||||||||||||||  |    
T  3756202 tacacccacataaaatcatgacatgtggcaaggaaaaggaaga-----tgaaaga-aaagtatgattgtgagataaatttactaaaatatccttaatgca 3756295  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    || ||||||||||| |||||||||||||||||  ||||| |||||||||    
T  3756296 tggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

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Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 46827656 - 46827807
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| |||||||||||| |||||| || || ||||||||||||| |||| ||||||||| ||||||| ||||  | ||||||  |    
T  46827656 tacacccacacaaaatcctgacatgtggcaagaaaaagggaggggagatgaaagagaaaatatgtttgtgagataaatttaccaaaacgttcttaatgca 46827755  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |  |||||||||||  ||||||||||||||||  ||||| ||||||||||||    
T  46827756 ttgggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 46827807  T

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Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 36004088 - 36004174
Alignment:
Q  132 atgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgta 218  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||  ||||| ||| ||||||||| ||||||    
T  36004088 atgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagataaatttatcaaaatgtccctaatatatggggtgta 36004174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 23036079 - 23035979
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||||||  ||||||||||| |||||| || ||||||   ||||| |||||||||||    
T  23036079 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcc 23035980  T
Q  261 t 261  Q
    |    
T  23035979 t 23035979  T

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Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 33703240 - 33703140
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||||| ||||  | |||||||  ||||| |||||||||||    
T  33703240 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 33703141  T
Q  261 t 261  Q
    |    
T  33703140 t 33703140  T

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Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 39631200 - 39631131
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgta 230  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| |||||||||||||| |||||||    
T  39631200 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgta 39631131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 45490314 - 45490375
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  45490314 aagataaagtgtggttgtgagatgaatttactaaagtatccctaatacatgaggtgtacaat 45490375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 49229684 - 49229765
Alignment:
Q  180 agatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |||||||||||| | ||||||||||||  |||| |||||||||| ||||||||||||||||   ||||| ||||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttcct 49229765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 28982835 - 28982923
Alignment:
Q  173 ggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |||||||||||||| |||| ||||||||| ||||||||| | ||||||||| ||||||  | |||||||  ||||| ||||||||||||    
T  28982835 ggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcct 28982923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 28988572 - 28988472
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||||||||| ||||| |||||||||||||  ||||| ||| || |  ||| |||||||||| |||||||||| |||||||  ||||| |||||||||||    
T  28988572 aagagaaagtgtggttatgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcc 28988473  T
Q  261 t 261  Q
    |    
T  28988472 t 28988472  T

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Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 27316714 - 27316813
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||| ||||||||| |||| ||||||||||||||| ||| |||||| ||| ||||||| || |||||||  ||| | |||||||||||    
T  27316714 aagataaagtgtggttatgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 27550408 - 27550309
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||| ||||||| |||| ||||||||| ||||| ||||||||||||||   |||||  | |||||||  ||||| |||||||||||    
T  27550408 aagataaagtgtggttgtaagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 27864658 - 27864563
Alignment:
Q  166 aaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||  | ||||||| |||| ||  || || ||||||||||||    
T  27864658 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcct 27864563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 43949802 - 43949869
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtg 228  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| |||||||||| |||||    
T  43949802 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtg 43949869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 48463456 - 48463551
Alignment:
Q  166 aaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||||||||||| |||| ||||||||| ||||| ||| | |||||||| |  ||||||| |||| ||  || || ||||||||||||    
T  48463456 aaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcct 48463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 41878505 - 41878407
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttc 259  Q
    ||||||| || ||||||||||||||| |||  ||||||||| ||||  ||  |||||||||| |||||||||| ||||| |  ||||| ||||||||||    
T  41878505 aagagaaggtttggttgtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

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Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 1771278 - 1771367
Alignment:
Q  172 tggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||||| |||  ||||||||  ||||| ||| ||||||||||  |||||| || |||||||  ||||| ||||||||||||    
T  1771278 tggttgtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 1771367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 27893843 - 27893904
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||    
T  27893843 aagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaat 27893904  T

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Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 31681001 - 31680940
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||||| | ||||||||||    
T  31681001 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatacggggtgtacaat 31680940  T

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Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 55966358 - 55966447
Alignment:
Q  172 tggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||||| |||| ||||||||| ||||| ||| | ||||||||  | ||||||| |||||||  || || ||||||||||||    
T  55966358 tggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcct 55966447  T

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Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 35017831 - 35017733
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| | ||| ||| |||||||||| || | || || |||||||  ||||| |||||||||||    
T  35017831 aagataaagtgtggttgtgagatgaacttaccaaaatatccct-atacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 43514698 - 43514784
Alignment:
Q  172 tggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    ||||||||||||||| |||| |||||| || ||||| |||| |||||||||   ||||| || |||||||  ||||| |||||||||    
T  43514698 tggttgtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 960753 - 960789
Alignment:
Q  79 gtggtgatgcatgtacacccacatgtggcaatacacc 115  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  960753 gtggtgatacatgtacacccccatgtggcaatacacc 960789  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 25051792 - 25051692
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| || |||||||||||| |||| ||||||||| ||||| ||  ||||||||||  |||||| || ||||| |  ||||| | |||||||||    
T  25051792 aagataaagtgtgattgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcc 25051693  T
Q  261 t 261  Q
    |    
T  25051692 t 25051692  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 41327544 - 41327624
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaaggg 241  Q
    |||||||||| ||| |||||||||||||||| ||||| ||| || |  || |||||||||||  ||||| ||| |||||||    
T  41327544 aagagaaagtgtggatgtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaaggg 41327624  T

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Target: chr2 (Bit Score: 98; Significance: 4e-48; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 77 - 261
Target Start/End: Complemental strand, 18491897 - 18491704
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||||         ||||||||||||| ||||||||||||||||||| | ||| |||||||||| |    
T  18491897 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctaacatgtggcaaggaaaagggataggagatgaaagagta 18491798  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |||||||||||||||||||||||| ||||| | ||||||  ||||||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  18491797 agtatggttgtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 18491704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 77 - 261
Target Start/End: Complemental strand, 43114749 - 43114556
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||||         ||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||    
T  43114749 gagtggtgatacatgtacaccctcatgtggcaatacacctcttacacccacacaaaatcctgacaagtggcaaggaaaagggagaggagatgaaagagaa 43114650  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||||||||| |||| ||||| ||| ||||  ||| ||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  43114649 agtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 43114556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 11825604 - 11825752
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||| |||| ||||| ||| ||||  |    
T  11825604 tacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatgattgtgagatgaaattaccaaaatgtccctaatgca 11825703  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    || ||||||||||| |||||||||||||||||  ||||| |||||||||    
T  11825704 tggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 966784 - 966935
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| || || |||||||||||||||||| ||||||||||||||||| ||||  | ||||||  |    
T  966784 tacacccacacaaaatcctgacatgtggcaaggaaaagggaggggagatgaaagagaaagtatgtttgtgagatgaatttaccaaaacgttcttaatgca 966883  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || ||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  966884 tggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 966935  T

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Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 41281924 - 41282072
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||  ||||| ||| ||||  |    
T  41281924 tacacccacacaaaatcctgacatgtggcaaggaaaagtgagaggagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgca 41282023  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    || ||||||||||| |||||||||||||||||  ||||| |||||||||    
T  41282024 tggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 4451900 - 4452026
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||  |    
T  4451900 tacacccacacaaaatcctgacatgtgggaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccctaatgca 4451999  T
Q  210 tgaggtgtacaataaggtgtatgatta 236  Q
    |  ||||||||||||| ||||||||||    
T  4452000 tatggtgtacaataagatgtatgatta 4452026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 4299370 - 4299518
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||||| ||||||| ||||||||||||||||| ||||| || |||||  |    
T  4299370 tacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagattaaagagtaagtatgattgtgagatgaatttaccaaaatgtcattaatgca 4299469  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    ||  |||||||||| |||||||||||||||||  ||||| |||||||||    
T  4299470 tggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 12415368 - 12415560
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||| | ||||||||||||||||         |||||||||| || |||||| |||| ||||||| ||||| ||||||||||||    
T  12415368 gagtggtgatacatgtacactcccatgtggcaatacacctcttacatccacacaaaattctgacatgtagcaaagaaaagggagaggagatgaaagagaa 12415467  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||||||||||||||| || |||| ||||| ||| ||||  ||| |||||||||||||||||||||||||||||  ||||| |||||||||||    
T  12415468 agtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 12427428 - 12427620
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||| | ||||||||||||||||         |||||||||| || |||||| |||| ||||||| ||||| ||||||||||||    
T  12427428 gagtggtgatacatgtacactcccatgtggcaatacacctcttacatccacacaaaattctgacatgtagcaaagaaaagggagaggagatgaaagagaa 12427527  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||||||||||||||| || |||| ||||| ||| ||||  ||| |||||||||||||||||||||||||||||  ||||| |||||||||||    
T  12427528 agtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 110 - 241
Target Start/End: Complemental strand, 14285826 - 14285695
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||| |||||||| |||||||| |||||||||| ||||| ||||||||||||||||||  | |||||||||||||| |||||||| ||||||||    
T  14285826 tacacccacataaaatcctcacatgtggtaaggaaaagggagaggagatgaaagagaaagtatgactctgagatgaatttaccaaaatatctttaatata 14285727  T
Q  210 tgaggtgtacaataaggtgtatgattaaaggg 241  Q
    |  ||||||||||| |||||||||||||||||    
T  14285726 tagggtgtacaatagggtgtatgattaaaggg 14285695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 77 - 261
Target Start/End: Original strand, 34895649 - 34895842
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaataca---------cccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||         ||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||    
T  34895649 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagataa 34895748  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |||||| ||||||||||||||||| || || ||| ||||  ||| ||||||||||| ||||| |||||||| ||  ||||| ||||| ||||||    
T  34895749 agtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcct 34895842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 110 - 241
Target Start/End: Original strand, 12531613 - 12531743
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||   || ||||       
T  12531613 tacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaa-gcccataatgct 12531711  T
Q  210 tgaggtgtacaataaggtgtatgattaaaggg 241  Q
    |||||||||||||  |||||||||||||||||    
T  12531712 tgaggtgtacaattgggtgtatgattaaaggg 12531743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 16804118 - 16803967
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||||||||| || ||||||||||||||||||   || | ||||||||||||||||||||||||||||||| |||  ||||| ||| ||||  |    
T  16804118 tacacccacacaaaattctgacatgtggcaaggaaaagtgtgaagagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgca 16804019  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || | ||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  16804018 tgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 16843400 - 16843249
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||||||||| || ||||||||||||||||||   || | ||||||||||||||||||||||||||||||| |||  ||||| ||| ||||  |    
T  16843400 tacacccacacaaaattctgacatgtggcaaggaaaagtgtgaagagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgca 16843301  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || | ||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  16843300 tgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 16843249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 30838731 - 30838631
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||||| ||||  | |||||||  ||||| |||||||||||    
T  30838731 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 30838632  T
Q  261 t 261  Q
    |    
T  30838631 t 30838631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 13780736 - 13780813
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaa 238  Q
    |||||||||| |||||||||||||||||||  ||||||||| |||| |||| |||||||||| |||||| ||| ||||    
T  13780736 aagagaaagtgtggttgtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaa 13780813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 1750513 - 1750414
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  |||||| || |||||||  ||||| |||||||||||    
T  1750513 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 34817777 - 34817875
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttc 259  Q
    |||||||||| |||||||||||||||||||| ||||| | | || |  ||| |||||||||| |||||| ||| |||||||  ||||| ||||||||||    
T  34817777 aagagaaagtgtggttgtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

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Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 4764727 - 4764827
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| |||||||||||||||||||| |||||||   ||||| ||| ||||||||||| |||||| || |||| ||  || || |||||||||||    
T  4764727 aagataaagtgtggttgtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttcc 4764826  T
Q  261 t 261  Q
    |    
T  4764827 t 4764827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 12302254 - 12302354
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  ||||||  | |||||||  ||||| |||||||||||    
T  12302254 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 12302353  T
Q  261 t 261  Q
    |    
T  12302354 t 12302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 43335764 - 43335864
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| | ||||||||||||| |||| ||||||||| ||||| ||| | |||||||| ||||||| || |||| |   ||||| |||||||||||    
T  43335764 aagataaagtgtagttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcc 43335863  T
Q  261 t 261  Q
    |    
T  43335864 t 43335864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 16096846 - 16096747
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| |||||||||||| || | || ||||||||| ||||| ||| |||||| |||  |||||| || |||||||  ||||| |||||||||||    
T  16096846 aagataaagtgtggttgtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 144
Target Start/End: Original strand, 6518444 - 6518478
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaa 144  Q
    ||||||||||||||||||| |||||||||||||||    
T  6518444 tacacccacacaaaatcctgacatgtggcaaggaa 6518478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 19047256 - 19047158
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttc 259  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||    |||| || |||||||  ||||| ||||||||||    
T  19047256 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 6518484 - 6518549
Alignment:
Q  175 ttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagg 240  Q
    |||||||||||| |||| ||||| ||| ||||  ||| |||||||||||  |||||||||||||||    
T  6518484 ttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagg 6518549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 45669 - 45817
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  45669 tacacccacataaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaataca 45768  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    |  | ||||||||| |||||||||||||||||  ||||| |||||||||    
T  45769 taggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 7e-47; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 17208224 - 17208073
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||  |    
T  17208224 tacatccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatgca 17208125  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || |||||||||||| ||||||||||||||||  ||||  ||||||||||||    
T  17208124 tggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcct 17208073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 110 - 260
Target Start/End: Original strand, 32473344 - 32473494
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||||||||| || ||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||  |    
T  32473344 tacacccacacaaaattctgacatgtggcaaagaaaagggagaggagatgaaagagaaagtatggttgtgagatgaaattaccaaaatatccctaatgca 32473443  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    || |||||||||||||||||||||||||||||  ||||| |||||||||||    
T  32473444 tgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 77 - 261
Target Start/End: Original strand, 30622627 - 30622819
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaataca---------cccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||         ||||||||||||  | ||||||||||||||||||  ||||| ||||||||||||    
T  30622627 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaattttgacatgtggcaaggaaaagagagaggagatgaaagagaa 30622726  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    |||||||||||||||| ||||||| ||||||||||||||  ||| ||  ||||||| ||||||||||||||||   ||||| ||||||||||||    
T  30622727 agtatggttgtgagataaatttaccaaaatatccttaatgcatg-ggcttacaatagggtgtatgattaaaggatgttcatgtaacattttcct 30622819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 41334664 - 41334763
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  |||||| ||| |||||||||| |||||||  ||||| |||||||||||    
T  41334664 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 7617232 - 7617132
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| |||||| |||   |||||||| |||||||  ||||| |||||||||||    
T  7617232 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcc 7617133  T
Q  261 t 261  Q
    |    
T  7617132 t 7617132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 18034081 - 18033981
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||   ||||| || |||||||  ||||| |||||||||||    
T  18034081 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 18033982  T
Q  261 t 261  Q
    |    
T  18033981 t 18033981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 33801568 - 33801468
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||| |||  |||||||||  ||||||  | ||||||   ||||| |||||||||||    
T  33801568 aagataaagtgtggttgtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcc 33801469  T
Q  261 t 261  Q
    |    
T  33801468 t 33801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 38470678 - 38470578
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| || |||||| |||||||||| ||||||||||||||| ||| ||||||||||    ||||||| |||||||  || || |||||||||||    
T  38470678 aagataaagtgtgattgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcc 38470579  T
Q  261 t 261  Q
    |    
T  38470578 t 38470578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 2614650 - 2614749
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  | |||| || |||||||  ||||| |||||||||||    
T  2614650 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 22512404 - 22512305
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| |||  |||||||||   ||||| || |||||||  ||||| |||||||||||    
T  22512404 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 5257094 - 5257033
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||    
T  5257094 aagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaat 5257033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 4e-45; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 31513479 - 31513287
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacaccc---------acacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| |||||||||||  |||||||||||||||          |||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  31513479 gagtggtgatacatgtacacccttatgtggcaatacacctcttacatctacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaa 31513380  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||||||||||||||||||||||| ||||||||||||||  ||| ||| ||||||| ||||||||||||||| |  ||||| |||||||||||    
T  31513379 agtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 110 - 259
Target Start/End: Original strand, 31408583 - 31408732
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||  |    
T  31408583 tacacccacataaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgaaatgaatttaccaaaatatccttaatgca 31408682  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttc 259  Q
    || | |||||||||  ||||||||||||||||  ||||| ||||||||||    
T  31408683 tgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 77 - 261
Target Start/End: Complemental strand, 40237111 - 40236918
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaatacacc---------cacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||||         ||||||||||||| ||||||||||||||||||  ||||| ||||||||||||    
T  40237111 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaaggaaaagtgagaggagatgaaagagaa 40237012  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    | ||||||||||||||||| |||| ||||| ||| ||||  ||| ||||||||||| | |||||||||||||||  ||||| ||||||||||||    
T  40237011 aatatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcct 40236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 27535181 - 27535332
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||| ||||||||||| || ||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||| |||| ||||| || |||| | |    
T  27535181 tacatccacacaaaattctgacatgtggcaaggaaaaaggagaggagatgaaagagaaagtatagttgtgagatgaaattaccaaaatgtctttaacaca 27535280  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||  ||||||||||  ||||||||||||||||  ||||| ||||||||||||    
T  27535281 tggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 27535332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 33385021 - 33384869
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||| |||||||||| | ||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||| ||||| ||| ||||  |    
T  33385021 tacacccatacaaaatcctgatatgtggcaaggaaaagggagaggagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatgtccctaatgca 33384922  T
Q  210 tgaggtgtacaata-aggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||  || |||||||  |||||||||||||| |   ||||| ||||||||||||    
T  33384921 tggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttcct 33384869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 35069820 - 35069720
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| |||||||||||||| ||||||| || ||||| |  ||||| |||||||||||    
T  35069820 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcc 35069721  T
Q  261 t 261  Q
    |    
T  35069720 t 35069720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 4638200 - 4638297
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    |||| ||||||||||||||||||||| |||| ||||||||| ||||||||| ||||||||||   |||||||| |||| ||  ||||| |||||||||    
T  4638200 aagataaagtatggttgtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 44326272 - 44326180
Alignment:
Q  166 aaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||||||  | ||||||| |||||||  || || |||||||||    
T  44326272 aaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 10573848 - 10573751
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    |||| ||||| |||||||||||||||||||| ||||||| | ||||| ||| ||||||||||| | ||||||| |||||||  || || |||||||||    
T  10573848 aagataaagtgtggttgtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 5194232 - 5194332
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    ||||| |||| || ||||||||||||||||  ||||||||||||| | ||  |||||||||| |||||||||| |||| ||  ||||| |||||||||||    
T  5194232 aagagtaagtgtgattgtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 5194331  T
Q  261 t 261  Q
    |    
T  5194332 t 5194332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 5015494 - 5015433
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||||||||||||||    
T  5015494 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaat 5015433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 5810925 - 5811024
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||  ||||||||| ||||||||  ||||||||||  |||||| || |||||||   |||| |||||||||||    
T  5810925 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 24001013 - 24001112
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  | |||| || |||||||  ||||| |||||||||||    
T  24001013 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 42538432 - 42538531
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  | |||| || |||||||  ||||| |||||||||||    
T  42538432 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 42972940 - 42972890
Alignment:
Q  172 tggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    ||||||||||||||| |||| ||||||||| ||||| ||||||||||||||    
T  42972940 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaat 42972890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 32029818 - 32029879
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||| |||||||||||| ||||||||| ||||| ||| ||||||||||    
T  32029818 aagataaagtgtggttgttagatgaatttaccaaaatatccctaatacatggggtgtacaat 32029879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 38160580 - 38160641
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| | ||||||||||||| |||||||||||||| ||||| ||| ||||||||||    
T  38160580 aagataaagtgtagttgtgagatgaagttactaaaatatccctaatacatggggtgtacaat 38160641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 43343625 - 43343694
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgta 230  Q
    |||| ||||| ||||||||||||||| |||  ||||||||| ||||| ||| ||||||||||| ||||||    
T  43343625 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgta 43343694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 44416935 - 44417004
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgta 230  Q
    |||| ||||| ||||||||||||||| |||  ||||||||| ||||| ||| ||||||||||| ||||||    
T  44416935 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgta 44417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 45326119 - 45326058
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| || |||||||||||| |||| ||||||||| ||||||||| ||||||||||    
T  45326119 aagataaagtgtgattgtgagatgaacttaccaaaatatccctaatatatggggtgtacaat 45326058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 27393261 - 27393341
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaaggg 241  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||   |||||||||| | |||| || |||||||    
T  27393261 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaataaaggg 27393341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 43317542 - 43317442
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    ||||| |||| || ||||||||||||||||  ||||||||| |||   ||  | |||||||| |||||||||| |||| ||  ||||| |||||||||||    
T  43317542 aagagtaagtgtgattgtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 43317443  T
Q  261 t 261  Q
    |    
T  43317442 t 43317442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 35181666 - 35181515
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||| ||||| ||| ||||  |    
T  35181666 tacacccacacaaaatcctgacatgtggcaaggaaaagtgagaggagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgca 35181567  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || ||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  35181566 tggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 35181515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 77 - 218
Target Start/End: Original strand, 10678060 - 10678210
Alignment:
Q  77 gagtggtgatgcatgtacacccacatgtggcaataca---------cccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaa 167  Q
    |||||||||| ||||||||||| ||||||||||||||         ||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  10678060 gagtggtgatacatgtacacccccatgtggcaatacatctcttacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaa 10678159  T
Q  168 agtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgta 218  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  10678160 agtatggttgtgagatgaatttaccaaaatgtccttaatatatggggtgta 10678210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 18066668 - 18066819
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||||| ||||| || ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  18066668 tacacccacataaaattctgacatgtggcaaggaaaatggagaggagatgaaagagaaagtatggttgtgagatgaaattactaaaatatccctaataca 18066767  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || | |||||||||   |||||||||||||||  ||||| ||||||||||||    
T  18066768 tgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttcct 18066819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 34304938 - 34304787
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||| ||||| ||| ||||  |    
T  34304938 tacacccaaacaaaatcctgacatgtggcaaggaaaagtgagaggagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgca 34304839  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
    || ||||||||||| ||||||||||||||||   ||||| ||||||||||||    
T  34304838 tggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcct 34304787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 112 - 261
Target Start/End: Original strand, 16603578 - 16603727
Alignment:
Q  112 cacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatg 211  Q
    |||| ||| |||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||| || |||||  |||    
T  16603578 cacctacataaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgtctttaatgcatg 16603677  T
Q  212 aggtgtacaataaggtgtatgattaaagggcattcatctaacattttcct 261  Q
     |||||| ||||||||||||||||||||||  | ||| ||||||||||||    
T  16603678 gggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttcct 16603727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 113 - 241
Target Start/End: Original strand, 16358786 - 16358914
Alignment:
Q  113 acccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatga 212  Q
    ||||||| |||||| | |||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||  ||||||| ||||||  |||     
T  16358786 acccacataaaatcatgacatgtggcaagaaaaagggagaggagatgaaaaagaaagtatggttgtgagatgaatttatcaaaatattcttaatgcatgg 16358885  T
Q  213 ggtgtacaataaggtgtatgattaaaggg 241  Q
    | ||||||||| |||||||||||||||||    
T  16358886 gatgtacaatagggtgtatgattaaaggg 16358914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 33629943 - 33630091
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||| |||||||||  | ||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||| ||| ||||  |    
T  33629943 tacacctacacaaaattttgacatgtggcaaagaaaagggagaggagatgaaagagaaagtatagttgtgagatgaaattactaaaatgtccctaatgca 33630042  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    |  |||||||||| ||||||||||||||||||  ||| | |||||||||    
T  33630043 tagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 19386514 - 19386595
Alignment:
Q  109 atacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaattta 190  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  19386514 atacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatagttgtgagatgaattta 19386595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 20148854 - 20148762
Alignment:
Q  166 aaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||||||  | ||||||| |||||||  || || |||||||||    
T  20148854 aaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 2547095 - 2547034
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  2547095 aagataaagtgtggttgtgagatgaacttactaaaatatccctaatacatgaggtgtacaat 2547034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 42295294 - 42295197
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| |||  ||||||||| ||||||| || |||||||  ||||| |||||||||    
T  42295294 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 42699351 - 42699259
Alignment:
Q  166 aaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||| || |||||||||||  |||||| || |||||||  ||||| |||||||||    
T  42699351 aaagtgtggttgtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 5755002 - 5754902
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||||||| | ||||||||  | |||| || |||| ||  ||||| |||||||||||    
T  5755002 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcc 5754903  T
Q  261 t 261  Q
    |    
T  5754902 t 5754902  T

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Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 36743484 - 36743584
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  | |||| || |||||||  ||||| |||||||||||    
T  36743484 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 36743583  T
Q  261 t 261  Q
    |    
T  36743584 t 36743584  T

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Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 11582865 - 11582766
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||  | |||| || |||||||  ||||| |||||||||||    
T  11582865 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

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Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 29705461 - 29705362
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||  ||||||||| ||||| ||| ||||||||||  ||||||  | |||||||  ||||| |||||||||||    
T  29705461 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

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Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 29800951 - 29801012
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||||    
T  29800951 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaat 29801012  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 30912575 - 30912660
Alignment:
Q  173 ggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacatttt 258  Q
    |||||||||||||| |||| |||||| || ||||| |||| |||||||||  |||||| || |||||||  ||||| |||||||||    
T  30912575 ggttgtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 40528635 - 40528696
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||||||||| |||||||||||| ||||||  ||||| ||| ||||||||| ||||||||||    
T  40528635 aagagaaagtgtggttgtgagataaatttatcaaaatgtccctaatatatggggtgtacaat 40528696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 31384763 - 31384701
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaata 223  Q
    |||| ||||| ||||||||||||||| |||| ||||||| | ||||| ||| |||||||||||    
T  31384763 aagataaagtgtggttgtgagatgaacttaccaaaatattcctaatacatggggtgtacaata 31384701  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 3743870 - 3743813
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgta 218  Q
    |||| ||||| ||||||||||||||| |||  ||||||| ||||||||||| ||||||    
T  3743870 aagataaagtgtggttgtgagatgaacttatcaaaatatacttaatatatggggtgta 3743813  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 9241651 - 9241602
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatat 210  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||||||    
T  9241651 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatatat 9241602  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 26125734 - 26125673
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaat 222  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||    
T  26125734 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaat 26125673  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 10678205 - 10678241
Alignment:
Q  225 ggtgtatgattaaagggcattcatctaacattttcct 261  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  10678205 ggtgtatgattaaagggtattcatgtaacattttcct 10678241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 42197436 - 42197536
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||   |||| ||||  |||||| || |||| ||  ||||| |||||||||||    
T  42197436 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcc 42197535  T
Q  261 t 261  Q
    |    
T  42197536 t 42197536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 260
Target Start/End: Original strand, 35406 - 35556
Alignment:
Q  110 tacacccacacaaaatccttacatgtggcaaggaaaaggaagaggggatgaaagagaaagtatggttgtgagatgaatttactaaaatatccttaatata 209  Q
    |||||||| |||||||||  ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| || || ||| ||||  |    
T  35406 tacacccatacaaaatccagacatgcggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaatttaccaatatgtccctaatgca 35505  T
Q  210 tgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    || ||||||||||| |||||||||||||| ||  || || |||||||||||    
T  35506 tggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 784 - 684
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| |||||||||||||| ||||||| || |||||||  ||||| |||||||||||    
T  784 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 685  T
Q  261 t 261  Q
    |    
T  684 t 684  T

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Target: scaffold0385 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 11350 - 11250
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||||||| ||||||||||  ||||||||| ||||| |  ||||| | |||||||||    
T  11350 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcc 11251  T
Q  261 t 261  Q
    |    
T  11250 t 11250  T

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Target: scaffold0187 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 14189 - 14289
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  | ||||||||  ||||||  | |||||||  ||||| |||||||||||    
T  14189 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 14288  T
Q  261 t 261  Q
    |    
T  14289 t 14289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 24517 - 24617
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttcc 260  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  | ||||||||  ||||||  | |||||||  ||||| |||||||||||    
T  24517 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 24616  T
Q  261 t 261  Q
    |    
T  24617 t 24617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 112754 - 112656
Alignment:
Q  161 aagagaaagtatggttgtgagatgaatttactaaaatatccttaatatatgaggtgtacaataaggtgtatgattaaagggcattcatctaacattttc 259  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||| ||  ||||||||||    |||| || |||||||  ||||| ||||||||||    
T  112754 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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