View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1857R-Insertion-3 (Length: 979)

Name: NF1857R-Insertion-3
Description: NF1857R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1857R-Insertion-3
NF1857R-Insertion-3
[»] chr8 (41 HSPs)
chr8 (13-979)||(5921735-5922708)
chr8 (323-666)||(11879599-11879950)
chr8 (323-666)||(11897015-11897366)
chr8 (323-665)||(45403029-45403379)
chr8 (323-666)||(7489062-7489414)
chr8 (382-663)||(15294672-15294960)
chr8 (382-663)||(15475041-15475329)
chr8 (323-616)||(23142224-23142524)
chr8 (334-663)||(19704247-19704583)
chr8 (323-664)||(29384091-29384444)
chr8 (382-665)||(17646993-17647288)
chr8 (323-666)||(31424162-31424514)
chr8 (350-646)||(32424354-32424656)
chr8 (382-666)||(22910041-22910332)
chr8 (382-626)||(6810861-6811110)
chr8 (392-661)||(3094092-3094378)
chr8 (431-668)||(27836351-27836596)
chr8 (323-450)||(24414066-24414193)
chr8 (382-527)||(15761196-15761344)
chr8 (590-666)||(477101-477177)
chr8 (328-438)||(2040354-2040464)
chr8 (563-668)||(15761466-15761571)
chr8 (562-666)||(24056594-24056698)
chr8 (446-661)||(6292246-6292467)
chr8 (326-435)||(40541602-40541711)
chr8 (326-440)||(16752256-16752370)
chr8 (328-456)||(17566315-17566443)
chr8 (382-456)||(15231838-15231912)
chr8 (166-251)||(9217206-9217291)
chr8 (621-670)||(23136344-23136393)
chr8 (349-429)||(7262006-7262086)
chr8 (382-426)||(27836137-27836181)
chr8 (323-473)||(24056349-24056499)
chr8 (541-656)||(15231733-15231848)
chr8 (402-475)||(8582241-8582314)
chr8 (323-408)||(19335241-19335325)
chr8 (491-576)||(9212202-9212295)
chr8 (602-666)||(17788372-17788436)
chr8 (624-668)||(27672303-27672347)
chr8 (621-664)||(9036758-9036801)
chr8 (438-499)||(30240264-30240326)
[»] chr6 (43 HSPs)
chr6 (326-665)||(15527892-15528239)
chr6 (323-665)||(26053075-26053425)
chr6 (323-665)||(26073128-26073478)
chr6 (323-666)||(17103201-17103545)
chr6 (323-668)||(19748330-19748683)
chr6 (323-666)||(7223518-7223865)
chr6 (323-666)||(27233078-27233407)
chr6 (323-666)||(17543509-17543870)
chr6 (321-666)||(23897810-23898162)
chr6 (323-666)||(11327341-11327701)
chr6 (326-665)||(17250057-17250404)
chr6 (323-539)||(7918129-7918343)
chr6 (323-666)||(30912185-30912542)
chr6 (443-669)||(21354744-21354970)
chr6 (416-669)||(10508889-10509156)
chr6 (323-482)||(22498219-22498378)
chr6 (541-666)||(6943465-6943590)
chr6 (501-665)||(7918338-7918510)
chr6 (323-475)||(3573678-3573831)
chr6 (507-657)||(22498848-22499006)
chr6 (562-668)||(18491063-18491169)
chr6 (323-450)||(27614435-27614562)
chr6 (388-662)||(2912105-2912373)
chr6 (323-438)||(27890621-27890736)
chr6 (586-668)||(5422798-5422880)
chr6 (382-475)||(4841667-4841760)
chr6 (588-663)||(3573984-3574059)
chr6 (324-438)||(31108390-31108504)
chr6 (573-662)||(33583766-33583855)
chr6 (563-645)||(4841946-4842026)
chr6 (323-406)||(21354942-21355025)
chr6 (588-669)||(10958239-10958320)
chr6 (561-638)||(18490910-18490987)
chr6 (323-435)||(33583445-33583557)
chr6 (382-429)||(8275368-8275415)
chr6 (573-656)||(8285760-8285843)
chr6 (352-438)||(4596661-4596747)
chr6 (321-438)||(33592928-33593044)
chr6 (573-638)||(18490998-18491063)
chr6 (357-437)||(20432406-20432486)
chr6 (590-658)||(8545019-8545087)
chr6 (384-429)||(1179068-1179114)
chr6 (323-413)||(23506102-23506192)
[»] chr5 (31 HSPs)
chr5 (323-664)||(18843716-18844065)
chr5 (325-666)||(19578941-19579292)
chr5 (323-665)||(43234868-43235218)
chr5 (325-666)||(18051314-18051660)
chr5 (382-664)||(23172266-23172560)
chr5 (323-654)||(41688445-41688782)
chr5 (323-616)||(20320992-20321293)
chr5 (382-669)||(21058994-21059288)
chr5 (382-665)||(38158102-38158383)
chr5 (323-657)||(27339966-27340307)
chr5 (323-667)||(22645506-22645850)
chr5 (323-521)||(19042207-19042404)
chr5 (541-665)||(20923718-20923842)
chr5 (323-525)||(43005638-43005841)
chr5 (323-438)||(41427654-41427769)
chr5 (326-428)||(15051879-15051981)
chr5 (485-616)||(19979648-19979787)
chr5 (323-528)||(26021465-26021661)
chr5 (591-663)||(19042444-19042516)
chr5 (387-435)||(19377841-19377889)
chr5 (386-438)||(22984643-22984695)
chr5 (347-528)||(24648161-24648335)
chr5 (323-370)||(6852345-6852392)
chr5 (599-663)||(20320926-20320990)
chr5 (573-666)||(13342024-13342116)
chr5 (592-661)||(24106645-24106714)
chr5 (323-438)||(13341476-13341591)
chr5 (323-367)||(23172223-23172267)
chr5 (576-668)||(41427081-41427173)
chr5 (388-435)||(30799635-30799682)
chr5 (598-664)||(13350122-13350188)
[»] chr1 (46 HSPs)
chr1 (323-666)||(21846053-21846398)
chr1 (323-668)||(9351842-9352195)
chr1 (323-666)||(18304597-18304941)
chr1 (327-666)||(9954816-9955165)
chr1 (323-669)||(13100187-13100540)
chr1 (323-666)||(25146547-25146898)
chr1 (323-665)||(23528656-23529006)
chr1 (336-663)||(19009740-19010073)
chr1 (323-658)||(16125234-16125580)
chr1 (321-665)||(13276036-13276395)
chr1 (323-664)||(42179850-42180193)
chr1 (321-664)||(17869527-17869873)
chr1 (323-663)||(12513283-12513621)
chr1 (353-670)||(9128647-9128974)
chr1 (439-666)||(9327109-9327345)
chr1 (323-456)||(14074262-14074395)
chr1 (382-546)||(47785986-47786149)
chr1 (541-666)||(41032675-41032800)
chr1 (393-576)||(32881416-32881600)
chr1 (323-475)||(17055699-17055850)
chr1 (541-666)||(17056004-17056129)
chr1 (561-666)||(18337547-18337651)
chr1 (326-438)||(17197311-17197423)
chr1 (590-665)||(30619075-30619150)
chr1 (321-509)||(16434673-16434861)
chr1 (570-665)||(14074404-14074499)
chr1 (323-472)||(41032552-41032701)
chr1 (493-647)||(18228230-18228380)
chr1 (323-456)||(30619159-30619290)
chr1 (578-665)||(12800623-12800710)
chr1 (599-666)||(34478833-34478900)
chr1 (561-673)||(8772696-8772809)
chr1 (323-375)||(9954775-9954827)
chr1 (170-260)||(39783865-39783959)
chr1 (323-436)||(12002640-12002751)
chr1 (325-436)||(8773505-8773613)
chr1 (561-662)||(27917477-27917578)
chr1 (573-669)||(27502239-27502335)
chr1 (166-269)||(15382159-15382262)
chr1 (561-667)||(24117005-24117111)
chr1 (359-408)||(9321550-9321599)
chr1 (386-419)||(27502197-27502230)
chr1 (621-666)||(47785791-47785836)
chr1 (404-456)||(18228481-18228533)
chr1 (629-666)||(16417308-16417345)
chr1 (382-435)||(22789421-22789474)
[»] chr4 (43 HSPs)
chr4 (323-665)||(9770112-9770462)
chr4 (324-665)||(9911191-9911541)
chr4 (323-666)||(23064740-23065093)
chr4 (323-663)||(5375666-5376015)
chr4 (323-666)||(36120823-36121173)
chr4 (346-666)||(5361767-5362093)
chr4 (382-666)||(10142898-10143191)
chr4 (323-670)||(8889223-8889566)
chr4 (386-664)||(17466080-17466366)
chr4 (328-666)||(13023566-13023903)
chr4 (541-665)||(8011221-8011345)
chr4 (323-528)||(6346734-6346940)
chr4 (354-527)||(8010946-8011120)
chr4 (541-666)||(13551627-13551752)
chr4 (382-666)||(37240261-37240530)
chr4 (561-669)||(7044723-7044831)
chr4 (323-525)||(24719722-24719918)
chr4 (326-435)||(55476226-55476335)
chr4 (387-528)||(9149565-9149708)
chr4 (335-469)||(13551463-13551597)
chr4 (561-666)||(18459733-18459838)
chr4 (561-661)||(7815561-7815661)
chr4 (323-528)||(7045086-7045294)
chr4 (562-665)||(4156763-4156866)
chr4 (382-515)||(10394768-10394901)
chr4 (572-666)||(24719516-24719610)
chr4 (382-528)||(7044907-7045054)
chr4 (560-666)||(6347088-6347194)
chr4 (561-666)||(7452419-7452523)
chr4 (347-451)||(5943062-5943166)
chr4 (382-448)||(7452731-7452796)
chr4 (326-431)||(4157269-4157377)
chr4 (326-431)||(4157556-4157664)
chr4 (386-438)||(8367437-8367489)
chr4 (614-665)||(9149813-9149864)
chr4 (385-454)||(8931441-8931510)
chr4 (615-666)||(5846458-5846509)
chr4 (561-623)||(7803049-7803110)
chr4 (561-623)||(7825002-7825064)
chr4 (383-437)||(8743604-8743658)
chr4 (490-528)||(18459563-18459601)
chr4 (393-438)||(5884129-5884174)
chr4 (621-666)||(8744087-8744132)
[»] scaffold0186 (1 HSPs)
scaffold0186 (326-672)||(8436-8788)
[»] chr3 (52 HSPs)
chr3 (323-666)||(28745769-28746126)
chr3 (323-667)||(29067282-29067626)
chr3 (323-662)||(39427905-39428257)
chr3 (323-666)||(24619976-24620333)
chr3 (382-665)||(20756039-20756313)
chr3 (382-667)||(8155967-8156262)
chr3 (323-665)||(22137278-22137627)
chr3 (382-660)||(17064326-17064598)
chr3 (382-664)||(3449148-3449419)
chr3 (346-656)||(21963438-21963758)
chr3 (346-656)||(21985874-21986194)
chr3 (441-647)||(22494679-22494892)
chr3 (377-592)||(42696920-42697144)
chr3 (326-667)||(22355848-22356184)
chr3 (541-665)||(30727696-30727820)
chr3 (382-516)||(25870160-25870294)
chr3 (541-665)||(24649693-24649818)
chr3 (323-438)||(8592178-8592293)
chr3 (392-546)||(15515106-15515258)
chr3 (323-528)||(27676580-27676786)
chr3 (346-503)||(13286113-13286271)
chr3 (553-666)||(25870389-25870506)
chr3 (354-519)||(6136379-6136543)
chr3 (561-666)||(15806531-15806635)
chr3 (561-666)||(27676355-27676460)
chr3 (326-438)||(3041458-3041570)
chr3 (323-475)||(10872494-10872646)
chr3 (561-655)||(10872971-10873065)
chr3 (565-666)||(17796267-17796368)
chr3 (565-666)||(19104707-19104808)
chr3 (565-666)||(17796376-17796477)
chr3 (565-666)||(17796485-17796586)
chr3 (565-666)||(19104816-19104917)
chr3 (565-666)||(19104925-19105026)
chr3 (326-438)||(8560239-8560351)
chr3 (323-436)||(20766680-20766793)
chr3 (326-438)||(18014226-18014338)
chr3 (326-438)||(22971044-22971155)
chr3 (323-426)||(41671426-41671529)
chr3 (346-469)||(17796771-17796892)
chr3 (346-469)||(19105211-19105332)
chr3 (323-438)||(27090677-27090792)
chr3 (382-449)||(28135986-28136053)
chr3 (382-545)||(9152823-9152984)
chr3 (323-438)||(21553672-21553786)
chr3 (326-438)||(19348788-19348900)
chr3 (323-369)||(24649528-24649574)
chr3 (586-664)||(28135723-28135801)
chr3 (166-269)||(25296557-25296659)
chr3 (321-409)||(13006089-13006176)
chr3 (321-438)||(27055328-27055445)
chr3 (621-661)||(42696870-42696910)
[»] chr2 (42 HSPs)
chr2 (321-671)||(31237753-31238112)
chr2 (323-666)||(1404782-1405133)
chr2 (323-666)||(20063713-20064073)
chr2 (382-666)||(36429847-36430139)
chr2 (377-664)||(35565787-35566082)
chr2 (382-666)||(15588693-15588979)
chr2 (323-504)||(30432984-30433165)
chr2 (438-663)||(31578007-31578238)
chr2 (323-513)||(19262095-19262285)
chr2 (499-666)||(30432418-30432593)
chr2 (541-666)||(23863326-23863451)
chr2 (323-528)||(25538924-25539130)
chr2 (541-663)||(25539231-25539353)
chr2 (326-438)||(974573-974686)
chr2 (329-438)||(27523881-27523990)
chr2 (541-665)||(19491855-19491980)
chr2 (380-546)||(1690564-1690730)
chr2 (559-667)||(1690785-1690893)
chr2 (323-525)||(8428369-8428572)
chr2 (326-432)||(20034004-20034110)
chr2 (382-528)||(16766930-16767076)
chr2 (323-438)||(19245824-19245939)
chr2 (325-435)||(21869102-21869212)
chr2 (326-432)||(7302023-7302129)
chr2 (383-528)||(27406935-27407081)
chr2 (382-509)||(13502511-13502639)
chr2 (563-666)||(17995054-17995157)
chr2 (562-668)||(5395674-5395780)
chr2 (560-666)||(15266081-15266187)
chr2 (352-438)||(34578124-34578210)
chr2 (438-525)||(34841728-34841816)
chr2 (571-665)||(16766710-16766804)
chr2 (438-525)||(19492079-19492168)
chr2 (563-629)||(31023259-31023325)
chr2 (605-666)||(15627654-15627715)
chr2 (620-665)||(29660893-29660938)
chr2 (405-536)||(5395384-5395515)
chr2 (622-666)||(19245152-19245196)
chr2 (586-665)||(19257568-19257647)
chr2 (578-666)||(27750194-27750282)
chr2 (573-629)||(34841592-34841648)
chr2 (444-524)||(31023450-31023531)
[»] chr7 (54 HSPs)
chr7 (321-671)||(4247350-4247708)
chr7 (323-664)||(5058530-5058878)
chr7 (346-666)||(24725274-24725607)
chr7 (323-627)||(17811385-17811698)
chr7 (323-665)||(44944624-44944978)
chr7 (323-665)||(5715290-5715631)
chr7 (323-659)||(20570664-20571002)
chr7 (321-666)||(27221417-27221767)
chr7 (382-666)||(14055250-14055548)
chr7 (382-666)||(14365278-14365576)
chr7 (382-666)||(8329882-8330175)
chr7 (383-663)||(8346370-8346660)
chr7 (382-665)||(21846285-21846554)
chr7 (386-669)||(8343644-8343933)
chr7 (485-665)||(24990012-24990200)
chr7 (490-669)||(26281256-26281442)
chr7 (382-666)||(7730197-7730472)
chr7 (533-658)||(8571250-8571375)
chr7 (323-481)||(24989553-24989710)
chr7 (541-666)||(39182259-39182383)
chr7 (541-665)||(22687669-22687793)
chr7 (541-665)||(11326386-11326510)
chr7 (541-666)||(9685249-9685374)
chr7 (382-672)||(26617315-26617612)
chr7 (382-656)||(11324988-11325269)
chr7 (382-528)||(26565386-26565532)
chr7 (335-469)||(9685085-9685219)
chr7 (382-472)||(39182357-39182447)
chr7 (323-472)||(11326484-11326633)
chr7 (326-438)||(25842513-25842625)
chr7 (392-512)||(27509260-27509379)
chr7 (383-546)||(6916907-6917068)
chr7 (323-438)||(8304321-8304436)
chr7 (562-665)||(30294175-30294275)
chr7 (326-438)||(1981107-1981217)
chr7 (346-514)||(30294404-30294572)
chr7 (386-474)||(8329821-8329909)
chr7 (382-482)||(8572329-8572428)
chr7 (323-438)||(4574965-4575080)
chr7 (541-610)||(1977707-1977776)
chr7 (382-461)||(1977761-1977839)
chr7 (579-666)||(8630001-8630088)
chr7 (382-432)||(23618267-23618317)
chr7 (386-474)||(8346308-8346396)
chr7 (541-645)||(27509948-27510052)
chr7 (571-669)||(26565663-26565761)
chr7 (383-435)||(26340212-26340263)
chr7 (323-441)||(22687046-22687164)
chr7 (599-661)||(4574475-4574537)
chr7 (323-400)||(10285682-10285759)
chr7 (603-656)||(17809440-17809493)
chr7 (339-438)||(21157495-21157587)
chr7 (323-407)||(26281169-26281251)
chr7 (438-528)||(17809021-17809112)
[»] scaffold0417 (1 HSPs)
scaffold0417 (357-669)||(7268-7588)
[»] scaffold0042 (1 HSPs)
scaffold0042 (377-666)||(93538-93834)
[»] scaffold0016 (1 HSPs)
scaffold0016 (323-502)||(56204-56384)
[»] scaffold0603 (2 HSPs)
scaffold0603 (382-528)||(8797-8944)
scaffold0603 (565-666)||(9049-9150)
[»] scaffold0510 (2 HSPs)
scaffold0510 (541-666)||(105-231)
scaffold0510 (382-472)||(42-131)
[»] scaffold0079 (1 HSPs)
scaffold0079 (326-438)||(14708-14820)
[»] scaffold0017 (1 HSPs)
scaffold0017 (323-438)||(38306-38420)
[»] scaffold0048 (3 HSPs)
scaffold0048 (573-666)||(48825-48918)
scaffold0048 (382-479)||(48500-48597)
scaffold0048 (382-473)||(61152-61243)
[»] scaffold0534 (1 HSPs)
scaffold0534 (328-456)||(887-1015)
[»] scaffold0027 (1 HSPs)
scaffold0027 (382-438)||(132953-133009)
[»] scaffold0061 (1 HSPs)
scaffold0061 (323-438)||(76088-76202)
[»] scaffold2084 (1 HSPs)
scaffold2084 (326-420)||(81-175)
[»] scaffold0036 (1 HSPs)
scaffold0036 (561-666)||(37191-37296)
[»] scaffold0150 (1 HSPs)
scaffold0150 (377-435)||(33176-33234)
[»] scaffold0115 (1 HSPs)
scaffold0115 (580-665)||(35103-35188)
[»] scaffold0028 (1 HSPs)
scaffold0028 (386-435)||(145826-145875)
[»] scaffold0526 (2 HSPs)
scaffold0526 (326-438)||(8391-8503)
scaffold0526 (443-528)||(8289-8373)
[»] scaffold0001 (1 HSPs)
scaffold0001 (382-438)||(142864-142920)
[»] scaffold0182 (1 HSPs)
scaffold0182 (337-438)||(24621-24722)


Alignment Details
Target: chr8 (Bit Score: 821; Significance: 0; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 821; E-Value: 0
Query Start/End: Original strand, 13 - 979
Target Start/End: Complemental strand, 5922708 - 5921735
Alignment:
Q  13 gtatgtgaaggtttattgtattacacatgttcacaactaagatggtaatcaaatggacacaaaacaaaataaaaactaatagcgtaatgctgcttatcac 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  5922708 gtatgtgaaggtttattgtattacacatgttcacaactaagatggtaatcaaatggacacaaaacaaaataaaaactgatagcataatgctgcttatcac 5922609  T
Q  113 gaaagatttccatgcgaaagtttcaccacagtttttctactcaannnnnnnnnatagcaccaccttccttgttttgtgggcaggcaaagaggtaattggt 212  Q
    || |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||||||||    
T  5922608 gacagatttccatgcgaaagtttcaccacagtttttctactcaaattttttttatagcaccaccttccttgttttgtggccaggcaaagaggtaattggt 5922509  T
Q  213 taactgctattcgcaatctgatcgggacaatttccatctaaataaataacagtgctcaagctaatactaatgcacaaaactcataaatttattagtttta 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5922508 taactgctattcgcaatctgatcgggacaatttccatctaaataaataacagtgctcaagctaatactaatgcagaaaactcataaatttattagtttta 5922409  T
Q  313 tattgctggattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactca 412  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922408 tattgctgggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactca 5922309  T
Q  413 agaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggta 512  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922308 agaacttttgtagaatcgatataggaaattgtaaaatcgcaatctaa-tcgatggattttacccaaaaaatttaatactaaatatatgttatgaatggta 5922210  T
Q  513 tatagtcataaatgacctaatttataagaaatcgcaa--------tcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttg 604  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5922209 tatagtcataaatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatataagtcgttg 5922110  T
Q  605 aaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgtaatgacattaagtaccctaaacctctacttaaa 704  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922109 aaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgtaatgacattaagtaccctaaacctctacttaaa 5922010  T
Q  705 agtggtaactttaacaattcatgtcacgtgactcaatttagatctaattaacttaatctttacaaaaaccggtttgtaagataaggactaccctctattt 804  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5922009 agtggtaactctaacaattcatgtcacgtgactcaatttagatctaattaacttaatctttacaaaaaccagtttgtaagataaggactaccctctattt 5921910  T
Q  805 ataaatacattgttggaccgtatctattcaacgtaggtgttttgagcgattat-aaacatctatctatctgtagtaaaataaaccacgtgtgactattta 903  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5921909 ataaatacattgttggaccgtatctattcaacttaggtgttttgagcgattataaaacatctatctatctgtagtaaaataaaccacgtgtgactattta 5921810  T
Q  904 cctccctagcaattgtctaggctgcataccttttatctctttttccaaaaaccttttatattggg-caccattgtac 979  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||| ||||||||||| |||||||||||    
T  5921809 cctccctagcaattgtctatgctgcataccttttatctc-ttctccaaaaacc-tttatattgggccaccattgtac 5921735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 323 - 666
Target Start/End: Complemental strand, 11879950 - 11879599
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||| |||||| |||||| ||||||||||| |||||| ||||  ||| ||||||||||||||||||||||||||||  ||||||||||     
T  11879950 ttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaactttta 11879851  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||| |||||||||||||||| || |||| ||||||||||||| |||||   |||||||||||||||||||| |||||||||||||||||    
T  11879850 tagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcata 11879751  T
Q  523 aatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    ||| || || ||||||||||        ||||||||||||||||||| |||||  ||||||| |||||||||||| ||||| |||||||||| |||||||    
T  11879750 aattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaaga 11879651  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||  |||||||||| ||||||||||||||||| | |||||||||||||||    
T  11879650 aagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatg 11879599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 323 - 666
Target Start/End: Complemental strand, 11897366 - 11897015
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||| |||||| |||||| ||||||||||| |||||| ||||  ||| ||||||||||||||||||||||||||||  ||||||||||     
T  11897366 ttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaactttta 11897267  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||| |||||||||||||||| || |||| ||||||||||||| |||||   |||||||||||||||||||| |||||||||||||||||    
T  11897266 tagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcata 11897167  T
Q  523 aatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    ||| || || ||||||||||        ||||||||||||||||||| |||||  ||||||| |||||||||||| ||||| |||||||||| |||||||    
T  11897166 aattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaaga 11897067  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||  |||||||||| ||||||||||||||||| | |||||||||||||||    
T  11897066 aagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatg 11897015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 323 - 665
Target Start/End: Complemental strand, 45403379 - 45403029
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||   ||  ||| ||||||||||||||||||||||||||||| ||  |||||||    
T  45403379 ttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttg 45403280  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaat-ttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    |||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| |||||||  ||||| |||||||||||||| ||||||||||  ||||    
T  45403279 tagaatcgatataggaaattgtaaaa-cgcaatcaaaatcgatagattttaccaaaaaaataataatattaaatatatgttataaatggtatattatcat 45403181  T
Q  522 aaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaag 613  Q
    ||||||| |  || |||||        ||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||||||| |||    
T  45403180 aaatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaag 45403081  T
Q  614 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||||| ||||||| |||||||||| |||||||||| |||||||||||||||    
T  45403080 aaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaacaat 45403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 7489062 - 7489414
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| |||||||||| || ||||||||| ||||||||||| || ||  ||| ||||||||||||||||| ||||||||||||||| |||||||    
T  7489062 ttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggacttttg 7489161  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||| ||||||||||||||||||| |||| |||| ||||||| ||||||  ||||||||||||||||||||| |||| ||||||||||||    
T  7489162 tagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttactcaaaaatattaatactaaatatatgttataaatgatatatagtcata 7489261  T
Q  523 aatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctat----tttgggattctactatggatttaagtcgttgaaggtg 610  Q
    |||||| ||||||||||||||||        |||||||||||||||  |||||||||||    ||| | ||||||||| |||||| ||||||||||||||    
T  7489262 aatgacttaatttataagaaatcataaaattgcaatcaaaatcgataaattttgtctattttatttagaattctactacggattttagtcgttgaaggtg 7489361  T
Q  611 aagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||   |||||| ||| |||||| ||||||| | ||||||||||||| ||||    
T  7489362 aagaaag---caaaattctgtattttacgatttaattggggattttgacaataatg 7489414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 382 - 663
Target Start/End: Complemental strand, 15294960 - 15294672
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||| | ||||  |||||||||||| |||||    
T  15294960 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggattttacctaaaaa 15294861  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaat--------cgcaatcaaaatcgatggattttgtctat 573  Q
    | | ||||||||||||||||||  ||| || |||||||||||||||| || ||||||||||||        |||||||||||||||||||||||| ||||    
T  15294860 aat-aatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctat 15294762  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 663  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  15294761 tttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 382 - 663
Target Start/End: Complemental strand, 15475329 - 15475041
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||| | ||||  |||||||||||| |||||    
T  15475329 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggattttacctaaaaa 15475230  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaat--------cgcaatcaaaatcgatggattttgtctat 573  Q
    | | ||||||||||||||||||  ||| || |||||||||||||||| || ||||||||||||        |||||||||||||||||||||||| ||||    
T  15475229 aat-aatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctat 15475131  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 663  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  15475130 tttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 323 - 616
Target Start/End: Complemental strand, 23142524 - 23142224
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| |||||||| | ||  ||||||||||||||||||| | | |   ||| |||||||||  |||||||| ||||||| |||| ||||||||    
T  23142524 ttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatcgcaatttaaatcgaatgattttagtcaaaaacttttg 23142425  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||   |||||||||||||||||||| |||||||||||||||||    
T  23142424 tagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggacttta-ccaaaaataataatactaaatatatgttataaatggtatatagtcata 23142326  T
Q  523 aatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| |||||||||||        ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  23142325 aatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaggattctactatggatttcagtcgttgaagttgaaga 23142226  T
Q  615 aa 616  Q
    ||    
T  23142225 aa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 334 - 663
Target Start/End: Original strand, 19704247 - 19704583
Alignment:
Q  334 gggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgata 433  Q
    |||| |||||| || ||| |||||||||||||||||| | ||  ||| |||||||||||||||| ||||| |||||||||| ||| ||||||||||||||    
T  19704247 gggattttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgttgtagaatcgata 19704346  T
Q  434 taggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaat 533  Q
    |  |||||  ||||||| ||||| |||| ||||||||||||| ||||||   || |||||||||||||||  |||||||||||||||||||| || |  |    
T  19704347 tttgaaatcttaaaatcacaatcaaaatcgatggattttacctaaaaaa--aaaaactaaatatatgttacaaatggtatatagtcataaataacttggt 19704444  T
Q  534 ttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaa 625  Q
    ||||||||||||        ||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  19704445 ttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaa 19704544  T
Q  626 tcc-tggattttaggatttaagtcgggattttgacaaca 663  Q
     || || |||||| ||||||||| |||||||||||||||    
T  19704545 accttgaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 323 - 664
Target Start/End: Original strand, 29384091 - 29384444
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    ||||||||||||||| ||| || |||||||||||  || || |||||| ||  || ||| |||||||| |||||||||||||||||||||||  ||||||    
T  29384091 ttgtcaaaatcgggattttgcttcaggtcgaaagaaaagagaaaaatc-gacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactactttt 29384189  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt-----taatactaaatatatgttatgaatggtatata 516  Q
    |||||||  ||||| ||||| |||||||||||||| |||| ||||||||||||| ||||||       |||||||||||||||||||| |||||||||||    
T  29384190 gtagaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaaatactaatactaaatatatgttataaatggtatata 29384289  T
Q  517 gtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaagg 608  Q
    |||||||||||  |  ||||||||||||||        |||||||| |||||| |||||| ||||||| ||||| |||||||||||| ||||||||||||    
T  29384290 gtcataaatgaattgttttataagaaatcgtaaaatcgcaatcaaa-tcgatgaattttgcctatttttggattatactatggatttgagtcgttgaagg 29384388  T
Q  609 tgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    ||||||||||| |||||||   |||||||||||||||  | |||||||||||||||    
T  29384389 tgaagaaagtcgcaaaatctaagattttaggatttaaacctggattttgacaacaa 29384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 382 - 665
Target Start/End: Complemental strand, 17647288 - 17646993
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| | |||||    
T  17647288 aatcgcaatcaaaatcgaaggattttactcaactagttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaaaa 17647189  T
Q  482 att--taatactaaatatatgttatgaatggtatatagtcataaa--tgacctaatttataagaaatcg--------caatcaaaatcgatggattttgt 569  Q
    | |  ||| | ||||||||| |||  ||||||||||| | | |||  ||||    ||||||||||||||        ||||||||||||||| |||||      
T  17647188 aataataacattaaatatattttacaaatggtatataataaaaaaaatgactaggtttataagaaatcgttaaataacaatcaaaatcgatgaatttttc 17647089  T
Q  570 ctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||    
T  17647088 ctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 323 - 666
Target Start/End: Complemental strand, 31424514 - 31424162
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    |||||||||||| || |||||| ||||||||||| ||  ||||||||| ||  || ||| ||||||||||||||    ||||||||||||||  ||| ||    
T  31424514 ttgtcaaaatcgagattttacttcaggtcgaaagagatgagcaaaatc-gacaatcgtaaaatcgcaatcaaaac---aggattttactcaactactctt 31424419  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaa----tactaaatatatgttatgaatggtatatag 517  Q
    || |||| |||||| ||||| ||||||| |||||| |||| ||| ||||||||  ||||||   ||    ||||||||||||||||| | ||||||||||    
T  31424418 gtggaattgatataagaaatagtaaaattgcaatccaaatcgatagattttacaaaaaaaaaaaaaaaaatactaaatatatgttataattggtatatag 31424319  T
Q  518 tcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 609  Q
    ||||||| ||| || ||||||||||||||        ||||||||||| |||||||||| ||||||||||||||| |||||||||| |||||||||| |     
T  31424318 tcataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttgggattcttctatggatttgagtcgttgaaagg 31424219  T
Q  610 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||  ||||||||| ||||||| ||||||||| |||||||||||| ||||    
T  31424218 gaagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaataatg 31424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 350 - 646
Target Start/End: Complemental strand, 32424656 - 32424354
Alignment:
Q  350 tcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaat 449  Q
    ||||| |||||||||||| || ||||  ||| ||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  32424656 tcgaaggggaatagcaaa-tcggaactcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcgagataggaaattgtaaaat 32424558  T
Q  450 cgcaatcgaaattgatggattttacccaaaaaatttaatactaaat--atatgttatgaatggtatatagtcataaatgacctaatttataa-------- 539  Q
    ||||||  |||| ||| ||||||| ||| |||| ||||||||||||  ||||||||| ||||||||||||||||||||||| || | |||||            
T  32424557 cgcaataaaaatcgatagattttatccagaaaaattaatactaaatatatatgttataaatggtatatagtcataaatgacttagtatataataaatcgt 32424458  T
Q  540 gaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagg 639  Q
     ||||||||||||||||| ||  |||||||||||||| ||||||||||||| |||| | ||||| |   |||| ||||||| ||||||||  |||||||     
T  32424457 aaaatcgcaatcaaaatctataaattttgtctattttaggattctactatgaatttgaatcgttaa---tgaaaaaagtcataaaatcctaaattttaga 32424361  T
Q  640 atttaag 646  Q
    |||||||    
T  32424360 atttaag 32424354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 382 - 666
Target Start/End: Original strand, 22910041 - 22910332
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||| | |||| ||||||||||| ||||  | |||||||||||||||||| ||||| |||||||||||||| || | ||||   |||| | |||||    
T  22910041 aatcgcaaccgaaattgaaggattttattcaactatttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaagtcgatgatgtttaacaaaaaa 22910140  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaat--------cgcaatcaaaatcgatggattttgtctat 573  Q
    | | | |||||| |||||||||| |||||||||||||||||||| || |||||||||||||||        ||||||||||||| |||||||||| ||||    
T  22910141 agt-agtactaagtatatgttataaatggtatatagtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattttgcctat 22910239  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||  ||||||||||| ||||| |||||||||| ||||||||||||  ||||||||  |||||||||||||||||||||| || ||| |||||    
T  22910240 tttaagattctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagtcgggatgtttacatcaatg 22910332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 382 - 626
Target Start/End: Complemental strand, 6811110 - 6810861
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||| ||||||||||| |||||| ||||  ||||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||| |||||    
T  6811110 aatcgcaaccaaaatcgaagaattttaatcaactacttttgtagaatagatataagaaattg-aaaatcgcaatcaaaatcgatggattttaccaaaaaa 6811012  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctat 573  Q
    | | ||||||||||||||||||| |||| |||||||| ||||||||| || |||||| |        |||||| ||||||||||||| ||||||| ||||    
T  6811011 aat-aatactaaatatatgttataaatgatatatagttataaatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgat-gattttgcctat 6810914  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaat 626  Q
    |||   |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  6810913 tttaaaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 392 - 661
Target Start/End: Original strand, 3094092 - 3094378
Alignment:
Q  392 aaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaa-tcgcaatcgaaattgatggattttacccaaaaaatttaa-ta 489  Q
    ||||| ||||||||||||||||  ||||||||||     ||||| |||||||||||| |||||||| |||||||| ||||||||  ||||||   || ||    
T  3094092 aaaattgaaggattttactcaattacttttgtaggc---atataagaaattgtaaaaatcgcaatcaaaattgatagattttacaaaaaaaaaaaaaata 3094188  T
Q  490 ctaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaa------------------tcgcaatcaaaatcgatggattttgtct 571  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||||||  |||                  ||||||||||||||||||||||||| ||    
T  3094189 ctaaatatatgttataaatggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatcgatggattttgcct 3094288  T
Q  572 attttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 661  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||  |||||||||| |||||| |||||||||||  ||||||||||    
T  3094289 attttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 431 - 668
Target Start/End: Original strand, 27836351 - 27836596
Alignment:
Q  431 atataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacct 530  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||   ||||   ||||||||||| ||||||| ||||||||||||||||||||||| |    
T  27836351 atataggaaattgtaaaatcacaatcaaaatcgatggattttaccagcaaaaaaaaatactaaatacatgttataaatggtatatagtcataaatgactt 27836450  T
Q  531 aatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcaca 622  Q
    | ||||||||        |||| | ||||||||| |||| ||||||  |||||| | |||||||||||||||| ||| |||||||||||| |||  | ||    
T  27836451 agtttataagaaattgtaaaattgtaatcaaaattgatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaataaaaccgca 27836550  T
Q  623 aaatcctggattttaggatttaagtcgggattttgacaacaatggt 668  Q
    |||||||| |||||||||| |||||  | |||||||||||||||||    
T  27836551 aaatcctgaattttaggatctaagtttgaattttgacaacaatggt 27836596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 323 - 450
Target Start/End: Original strand, 24414066 - 24414193
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||| || |||||||| || |||||||||||||||||||||    ||  ||| ||||||||||||||||||||||||||||||||||| |||||    
T  24414066 ttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatttttg 24414165  T
Q  423 tagaatcgatataggaaattgtaaaatc 450  Q
    ||||||||||||||||||||||||||||    
T  24414166 tagaatcgatataggaaattgtaaaatc 24414193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 382 - 527
Target Start/End: Original strand, 15761196 - 15761344
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-a 480  Q
    |||||||||  |||||||||||||||||||||  |||||||||||||||||||| ||| | |||||||||||||| |||| ||||||||||||| ||| |    
T  15761196 aatcgcaatataaatcgaaggattttactcaattacttttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggattttaccaaaaca 15761295  T
Q  481 aatttaatactaaatatatgttatgaatggtatat--agtcataaatga 527  Q
    ||  |||| ||||||||||||||| ||| ||||||  ||||||||||||    
T  15761296 aaaataatgctaaatatatgttataaattgtatatagagtcataaatga 15761344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 590 - 666
Target Start/End: Original strand, 477101 - 477177
Alignment:
Q  590 ggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaatg 477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 2040464 - 2040354
Alignment:
Q  328 aaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaa 427  Q
    ||||||||||||||||| || |||||||| || |||||||||| ||||  ||| ||||||||||||||||||||||||||||||| | ||||||||||||    
T  2040464 aaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttactcatggacttttgtagaa 2040365  T
Q  428 tcgatatagga 438  Q
    ||||| |||||    
T  2040364 tcgatgtagga 2040354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 563 - 668
Target Start/End: Original strand, 15761466 - 15761571
Alignment:
Q  563 attttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 662  Q
    |||||| ||||||||||||| | ||||| |||| ||||||||||||| || ||| ||||||||||||||| |||||||||||||||| ||||||||||||    
T  15761466 attttgcctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaac 15761565  T
Q  663 aatggt 668  Q
    ||||||    
T  15761566 aatggt 15761571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 562 - 666
Target Start/End: Original strand, 24056594 - 24056698
Alignment:
Q  562 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 661  Q
    |||||||||||||||||||||   |||||||||| ||||||| || ||||| |||||| ||||||||||||||||||||||||||||  |||||||| ||    
T  24056594 gattttgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataa 24056693  T
Q  662 caatg 666  Q
    |||||    
T  24056694 caatg 24056698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 446 - 661
Target Start/End: Original strand, 6292246 - 6292467
Alignment:
Q  446 aaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaat- 544  Q
    ||||||||||  |||||||||||||||| |  |||||| ||||| ||||||||| |||| ||||||||||||| ||||||||| ||  |||||| ||||     
T  6292246 aaatcgcaattaaaattgatggattttatc--aaaaatataatattaaatatattttataaatggtatatagtgataaatgacttagattataataaatt 6292343  T
Q  545 -------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggatttta 637  Q
           |||||||||||||| || |||||   |||||| | ||| |||||||| ||| ||||||| ||| |||| |||||||||||||| |  ||||||    
T  6292344 gtaagaccgcaatcaaaatcgttgaatttttcttattttagaattatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaatttta 6292443  T
Q  638 ggatttaagtcgggattttgacaa 661  Q
     |||||||||||| ||||| ||||    
T  6292444 agatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 326 - 435
Target Start/End: Original strand, 40541602 - 40541711
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| || ||||||||| | |||||||||| | ||  ||| ||||||||||||||| ||| ||||||| ||||| |||| |||||    
T  40541602 tcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttattcaaggacttctgtag 40541701  T
Q  426 aatcgatata 435  Q
    ||||||||||    
T  40541702 aatcgatata 40541711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 326 - 440
Target Start/End: Complemental strand, 16752370 - 16752256
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||| || |||||||| || ||||||||||| |||||||||  | ||  ||| |||||||| |||||||||||||||||||||||| | ||||||||    
T  16752370 tcaaaattggaactttacttcaagtcgaaagggagtagcaaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttactcaaggaattttgtag 16752271  T
Q  426 aatcgatataggaaa 440  Q
    ||| ||| |||||||    
T  16752270 aattgatgtaggaaa 16752256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 328 - 456
Target Start/End: Complemental strand, 17566443 - 17566315
Alignment:
Q  328 aaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtaga 426  Q
    |||||| ||| ||| || |||||| |||||||| ||||||||  ||| || ||| ||| |||||||||||||||| |||||||||||  |||||||||||    
T  17566443 aaaatcaggattttgcttcaggtcaaaagggaagagcaaaatt-gaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtaga 17566345  T
Q  427 atcgatataggaaattgtaaaatcgcaatc 456  Q
    |  |||||| ||||||||||||||||||||    
T  17566344 acagatataagaaattgtaaaatcgcaatc 17566315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 382 - 456
Target Start/End: Complemental strand, 15231912 - 15231838
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatc 456  Q
    ||||||||  ||||||| | ||||||||||||  ||||||||||||||||||||  |||||||||||||||||||    
T  15231912 aatcgcaactaaaatcgtacgattttactcaactacttttgtagaatcgatataaaaaattgtaaaatcgcaatc 15231838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 9217206 - 9217291
Alignment:
Q  166 atagcaccaccttccttgttttgtgggcaggcaaagaggtaattggttaactgctattcgcaatctgatcgggacaatttccatct 251  Q
    ||||||||| ||| |||||||||||| ||| || | | || ||||||||| ||||||||||||||||| ||||||||||| |||||    
T  9217206 atagcaccatctttcttgttttgtggccagacagaaatgtgattggttaattgctattcgcaatctgaacgggacaattttcatct 9217291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 670
Target Start/End: Complemental strand, 23136393 - 23136344
Alignment:
Q  621 caaaatcctggattttaggatttaagtcgggattttgacaacaatggttg 670  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  23136393 caaaatcctgaattttaggatttaagtcgggattttgacaataatggttg 23136344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 349 - 429
Target Start/End: Complemental strand, 7262086 - 7262006
Alignment:
Q  349 gtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatc 429  Q
    ||||||||| | |||||||||| | ||  ||| |||||||||||||||  |||||||||||||||| ||||||||||||||    
T  7262086 gtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttactcaaggacttttgtagaatc 7262006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 27836137 - 27836181
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtaga 426  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  27836137 aatcgcaatcaaaatcgaaggattttactcaaggacttttgtaga 27836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 323 - 473
Target Start/End: Original strand, 24056349 - 24056499
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatg-tacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    ||||||||| || || ||| || ||||||||||||||| ||||||||  ||| ||  || ||| | ||||||||||||||||||||||||||  | ||||    
T  24056349 ttgtcaaaaccgagattttgcttcaggtcgaaagggaagagcaaaatt-gaatatcataaaatggtaatcaaaatcgaaggattttactcaactagtttt 24056447  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta 473  Q
    |||||||| |||||  ||||  |||||||||||||  ||| ||| |||||||    
T  24056448 gtagaatcaatataacaaatgttaaaatcgcaatcataatcgatagatttta 24056499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 541 - 656
Target Start/End: Complemental strand, 15231848 - 15231733
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    ||||||||||||||   | ||||||||| |||||||  |||| || |||| |||| |||||||||||||||||||  || ||||||| |  | |||||||    
T  15231848 aaatcgcaatcaaatatgttggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaacatcgcaaaatcttaaagtttagga 15231749  T
Q  641 tttaagtcgggatttt 656  Q
    ||||| ||| ||||||    
T  15231748 tttaaatcgagatttt 15231733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 8582314 - 8582241
Alignment:
Q  402 gattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 475  Q
    ||||||||||||  ||||||||||||| |||||| ||||| |||||||  ||||| |||| |||| ||||||||    
T  8582314 gattttactcaactacttttgtagaattgatataagaaatcgtaaaattacaatcaaaatcgatgaattttacc 8582241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 19335325 - 19335241
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggatttta 408  Q
    ||||||||||||||||||||||  ||||| ||| | ||||| |||||  |||| | ||||||| ||||||||||||| ||||||||    
T  19335325 ttgtcaaaatcgggactttactttaggtcaaaaagaaatagtaaaattggaac-tctacaatcacaatcaaaatcgatggatttta 19335241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 491 - 576
Target Start/End: Original strand, 9212202 - 9212295
Alignment:
Q  491 taaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctatttt 576  Q
    |||||||| ||||| |||||||||| |||||||||||  || ||||||||        |||||||||||||||||||||||||||  |||||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttt 9212295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 602 - 666
Target Start/End: Original strand, 17788372 - 17788436
Alignment:
Q  602 ttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||  |||||| ||||||||| |||||||  |||||||| | ||||||||||||||||    
T  17788372 ttgaaggtgagtaaagtctcaaaatcctagattttaaaatttaagttgcgattttgacaacaatg 17788436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 624 - 668
Target Start/End: Original strand, 27672303 - 27672347
Alignment:
Q  624 aatcctggattttaggatttaagtcgggattttgacaacaatggt 668  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||    
T  27672303 aatcttggattttagaatttaagtcgggattttggcaacaatggt 27672347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 664
Target Start/End: Original strand, 9036758 - 9036801
Alignment:
Q  621 caaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||||| ||||||||||||||||| || ||||||||||||    
T  9036758 caaaatcctgaattttaggatttaagtcaggtttttgacaacaa 9036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 438 - 499
Target Start/End: Original strand, 30240264 - 30240326
Alignment:
Q  438 aaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatat 499  Q
    |||| |||||||||||||| ||||||||||||| |||| ||| |||  |||||||||||||||    
T  30240264 aaatcgtaaaatcgcaatcaaaattgatggattctaccaaaacaaaaataatactaaatatat 30240326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 223; Significance: 1e-122; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 326 - 665
Target Start/End: Original strand, 15527892 - 15528239
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||  ||||||||| |||||||||||| |||||||||||| ||||  | | ||||||||||||||||||||||||||||||||| ||||||||||    
T  15527892 tcaaaatcctgactttacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 15527991  T
Q  426 aatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaat 525  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  15527992 aatcgatataggaaattgtaaaatcgcaatcgaaatcgatggatttcccccaaaaaatttaatactaaatatatgttataaatggtatatagttataaat 15528091  T
Q  526 gacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaag 617  Q
    ||| || ||||||||        ||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||||||||||    
T  15528092 gacttagtttataagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaagattctactatgaatttaagtcgttaaaggtgaagaaag 15528191  T
Q  618 tcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||    
T  15528192 tcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 7e-98
Query Start/End: Original strand, 323 - 665
Target Start/End: Original strand, 26053075 - 26053425
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| |||||||||| |||||||||||| |||||||||||  | ||  ||| |||| |||||||||||||| ||||||||||||  |||||||    
T  26053075 ttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttg 26053174  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||||   ||||||||| |||||||||| |||||||||||||||||    
T  26053175 tagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcata 26053274  T
Q  523 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    ||| || || ||||||||||||||        |||||||||| |||||||||||  ||||||||||||||| |||| |||| |||| |||||||||||||    
T  26053275 aataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaaga 26053374  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  26053375 aagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 7e-98
Query Start/End: Original strand, 323 - 665
Target Start/End: Original strand, 26073128 - 26073478
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| |||||||||| |||||||||||| |||||||||||  | ||  ||| |||| |||||||||||||| ||||||||||||  |||||||    
T  26073128 ttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttg 26073227  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||||   ||||||||| |||||||||| |||||||||||||||||    
T  26073228 tagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcata 26073327  T
Q  523 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    ||| || || ||||||||||||||        |||||||||| |||||||||||  ||||||||||||||| |||| |||| |||| |||||||||||||    
T  26073328 aataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaaga 26073427  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  26073428 aagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 323 - 666
Target Start/End: Complemental strand, 17103545 - 17103201
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| || |||||||||||||| ||||||||| ||  ||| |||||||||||| | |||||||||||||||||| |||||||    
T  17103545 ttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactcaaggacttttg 17103446  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||| || |||| ||||||||| ||    
T  17103445 tagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacctaaaaaaattaataataaatatatgtcataaatgatatatagtcgta 17103346  T
Q  523 aatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    ||| || || ||||||||||        |||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||         
T  17103345 aataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaagt----- 17103251  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
      ||| |||||||||| |||||| ||||||||||||||||||||||||||||    
T  17103250 --gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaatg 17103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 323 - 668
Target Start/End: Complemental strand, 19748683 - 19748330
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||| | |   ||| ||||||||||||||||||||||||||||||||| |||||||    
T  19748683 ttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 19748584  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||   ||||||||||||||| |||| |||| ||||||||| ||    
T  19748583 tagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccagaaaataataatactaaatatattttataaatgatatatagtctta 19748484  T
Q  523 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || ||||||||||||||        ||||||||||||||| |||||| |||||||  |||||||||| |||||| |||| || ||||||||||    
T  19748483 aatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggtgaaga 19748384  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggt 668  Q
    || || |||||||||||||| || |||||||||||||||||||| |||||||||    
T  19748383 aaatctcaaaatcctggattgtaagatttaagtcgggattttgaaaacaatggt 19748330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 323 - 666
Target Start/End: Complemental strand, 7223865 - 7223518
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | ||  ||| ||| ||||||||||||||||||||||||||||| |||||||    
T  7223865 ttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttg 7223766  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatacta----aatatatgttatgaatggtatatagt 518  Q
    ||||||||||||||||||||||||||||||||||  |||  |||||||||| ||||| ||  ||||||||    |||||||||||| |||||||||||||    
T  7223765 tagaatcgatataggaaattgtaaaatcgcaatcagaatcaatggatttta-ccaaacaaaataatactaaattaatatatgttataaatggtatatagt 7223667  T
Q  519 cataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg 610  Q
    |||||||||| || ||||||||        ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||       |||||    
T  7223666 cataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattctactatggatttaag-------aggtg 7223574  T
Q  611 aagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  7223573 aagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 27233078 - 27233407
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||| | ||||||| |||||| |||||||||  ||||||| | ||   || ||||||||||||||| |||||||||||||||||  |||| |    
T  27233078 ttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcaaggtctttag 27233177  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||| ||||| ||||||||||||||||||| |||| ||| |||||||||  ||||   |||||||||||||||||||| |||||||||||   | |    
T  27233178 tagaatcgctatagaaaattgtaaaatcgcaatcaaaatcgatagattttaccataaaacaataatactaaatatatgttataaatggtatata---aga 27233274  T
Q  523 aatgacctaatttataagaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcaca 622  Q
    ||| |         |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27233275 aatca---------taa--aatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcaca 27233363  T
Q  623 aaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||||||||||||||||||||||| | |||||||||||||    
T  27233364 aaatcctggattttaggatttaagtcggtagtttgacaacaatg 27233407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 17543509 - 17543870
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||| ||||| ||||||||||| |||||||||| |||||||||||||| | ||   || ||||| ||||||||||||||||||||||||||| |||||||    
T  17543509 ttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttactcaaggacttttg 17543608  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc---------caaaaaat-ttaatactaaatatatgttatgaatggta 512  Q
    |||||||||||| ||||||||||||||||||||| |||| |||||||||||||          |||||||  |||||||||||||||||||| |||||||    
T  17543609 tagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaataaaaaaaaaataataatactaaatatatgttataaatggta 17543708  T
Q  513 tatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttg 604  Q
    ||||||| |||||||| || ||||||||        ||||||||||||||||| || |||||||  ||||||  ||||||||||||||||| ||||||||    
T  17543709 tatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagattttgcttattttaagattctactatggatttgagtcgttg 17543808  T
Q  605 aaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    || ||||| |||||| |||||||||| |||||||||||||||||| ||||||||||||||||    
T  17543809 aaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaatg 17543870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 321 - 666
Target Start/End: Complemental strand, 23898162 - 23897810
Alignment:
Q  321 gattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactt 419  Q
    ||||||||||||||||| ||| || ||||||||| | ||| ||||||||| ||  || ||| ||||| || |||||||||||||||||||||||  ||||    
T  23898162 gattgtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatc-gacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactactt 23898064  T
Q  420 ttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtc 519  Q
    | |||||||||||||| |||||||||||||| ||||| |||| ||||||||||||| ||||||   ||||||||||||||||||| ||||||||||||||    
T  23898063 t-gtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggattttaccaaaaaaaaaaaatactaaatatatgttataaatggtatatagtc 23897965  T
Q  520 ataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtga 611  Q
    ||||||||| || ||||||||||        |||||||||||||||||||||||| | ||||||| | ||| |||||||||||| |||||||||| ||||    
T  23897964 ataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacgtga 23897865  T
Q  612 agaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||| |||||||||| |||||||||||||||||||||| ||  ||||||||    
T  23897864 agaaagtcgcaaaatcctgcattttaggatttaagtcgggatcttatcaacaatg 23897810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 11327341 - 11327701
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||   ||  ||| |||||||||||||||||||| |||||||||||| |||||||    
T  11327341 ttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttg 11327440  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt--------taat-actaaatatatgttatgaatggtat 513  Q
    |||||||||||||||||||||||||||||||| | |||| ||||||||||||| |||||| |        |||| | |||||| |||| || ||||||||    
T  11327441 tagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttaccaaaaaaaataaaataaataataaataaatacatgtgataaatggtat 11327540  T
Q  514 atagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttga 605  Q
    | ||||||||||||  || || |||||        |||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  11327541 acagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttga 11327640  T
Q  606 aggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    || ||||||||  | ||||| | ||||||||||| ||||||||||||||||||||||||||    
T  11327641 agatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 11327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 326 - 665
Target Start/End: Complemental strand, 17250404 - 17250057
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatc--gaaggattttactcaagaacttttgt 423  Q
    ||||||||||||||||||| |||||||||||| ||| || || |  || |  ||| |||||||||||||||   |||||||||||||||||  |||| ||    
T  17250404 tcaaaatcgggactttacttcaggtcgaaaggaaatggcgaattggga-ctcgtaaaatcgcaatcaaaataaagaaggattttactcaaggtctttagt 17250306  T
Q  424 agaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataa 523  Q
    |||||||  |||| |||||||||| |||||||| ||||  |||||||||||| |||||   || || ||||||||| |||| |||  |||||||||||||    
T  17250305 agaatcgccatagaaaattgtaaattcgcaatcaaaatcaatggattttaccaaaaaacaatagtaataaatatatattataaatt-tatatagtcataa 17250207  T
Q  524 atgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaa 615  Q
    ||||| || ||||||||||||||        ||||||||||| ||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  17250206 atgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaa 17250107  T
Q  616 agtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  17250106 agttgcaaaatcctggattttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 323 - 539
Target Start/End: Original strand, 7918129 - 7918343
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||| ||  ||| ||| |||||||||||||||| |||||||||||| |||||||    
T  7918129 ttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttactcaaggacttttg 7918228  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||||||| ||||||  ||||||||||| |||||||| |||| ||||||||||||    
T  7918229 tagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaa--taatactaaatttatgttataaatgatatatagtcata 7918326  T
Q  523 aatgacctaatttataa 539  Q
    |||||| ||||||||||    
T  7918327 aatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 30912185 - 30912542
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    ||||||||||||| | ||| || ||||| ||||| ||||||||||||| ||  || ||| |||| ||| |||||| ||||||||||| ||||  ||||||    
T  30912185 ttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatc-gataatcgtaaaatctcaaccaaaattgaaggattttattcaactactttt 30912283  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttac-----cca-aaaaatttaatactaaatatatgttatgaatggtatat 515  Q
    ||| |||||||||| |||||  || ||||||||||  ||| ||||||||||||     ||| |||||  ||||||||||||||||| || |||| |||||    
T  30912284 gtaaaatcgatataagaaatcatagaatcgcaatcataatcgatggattttacttttaccacaaaaaaataatactaaatatatgtgataaatgatatat 30912383  T
Q  516 agtcataaatgacctaatttataagaaat--------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaag 607  Q
    | ||||||||||| || ||||||||||||        ||||||||||||| |||||||||| |||||||| ||||||| ||||||||| |||||||||||    
T  30912384 aatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtgattctattatggatttgagtcgttgaag 30912483  T
Q  608 gtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||||    
T  30912484 gtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 30912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 443 - 669
Target Start/End: Complemental strand, 21354970 - 21354744
Alignment:
Q  443 gtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa 542  Q
    |||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||||    
T  21354970 gtaaaatcgcaatcaaaatcgatggatttcacccaaataatttaatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaa 21354871  T
Q  543 --------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggatt 634  Q
            |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||        ||| |||||    
T  21354870 atcgtaaaatcgcaataaaaaacgatggattttgtctattttgggattctaccatggatttaagtcgttgaaggtaaagaaag--------tccaggatt 21354779  T
Q  635 ttaggatttaagtcgggattttgacaacaatggtt 669  Q
    ||||||||||||| |||||||||||||||||||||    
T  21354778 ttaggatttaagttgggattttgacaacaatggtt 21354744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 416 - 669
Target Start/End: Original strand, 10508889 - 10509156
Alignment:
Q  416 acttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt-taatactaaatatatgttatgaatg----- 509  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| | ||| |||  ||||| |||||||||||||| ||||         
T  10508889 acttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaattgatggattttatcaaaataataataataataaatatatgttataaatgactta 10508988  T
Q  510 -gtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtc 600  Q
     ||||||||| ||||||||| || ||||||| ||        |||| |||||||||||||| |||||| ||||||||||||||||||||  |||| ||||    
T  10508989 ggtatatagt-ataaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtc 10509087  T
Q  601 gttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 669  Q
     ||||| ||||||||||||||||| | ||| ||||||||||||||||| |||||||||||| |||||||    
T  10509088 attgaatgtgaagaaagtcacaaatttctgaattttaggatttaagtctggattttgacaataatggtt 10509156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 22498219 - 22498378
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||  | ||  ||| ||||||||||||||| ||| ||||||||||||  |||||||    
T  22498219 ttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagacttttg 22498318  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaa 482  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  22498319 tagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaa 22498378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 541 - 666
Target Start/End: Original strand, 6943465 - 6943590
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  6943465 aaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagga 6943564  T
Q  641 tttaagtcgggattttgacaacaatg 666  Q
    ||||||||||||||||||||||||||    
T  6943565 tttaagtcgggattttgacaacaatg 6943590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 501 - 665
Target Start/End: Original strand, 7918338 - 7918510
Alignment:
Q  501 ttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaa--------tcaaaatcgatggattttgtctattttgggattctactatgga 592  Q
    |||| |||| |||||||||||||||||| |||||||||| |||||||||        ||||||||||| |||||||  ||| || ||||| |||||||||    
T  7918338 ttataaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatgga 7918437  T
Q  593 tttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  7918438 tttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 323 - 475
Target Start/End: Original strand, 3573678 - 3573831
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaa-gggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||  ||| ||||||||||||||||| |||| |||||||||  ||| ||    
T  3573678 ttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaactactctt 3573777  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 475  Q
    ||||||| |||||| |||||||||||||||||||| |||| ||||  |||||||    
T  3573778 gtagaatagatataagaaattgtaaaatcgcaatcaaaatcgatgagttttacc 3573831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 507 - 657
Target Start/End: Original strand, 22498848 - 22499006
Alignment:
Q  507 atggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaag 598  Q
    |||||||||||||||||||||| |  ||||||||||||||        |||| |||||||||||||||||||||||||| |||| |||||||||||| ||    
T  22498848 atggtatatagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgag 22498947  T
Q  599 tcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttg 657  Q
    ||||| ||||||||||||||| ||||||  |||| |||||||||| ||| |||||||||    
T  22498948 tcgttcaaggtgaagaaagtcgcaaaattgtggaatttaggattttagttgggattttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 562 - 668
Target Start/End: Original strand, 18491063 - 18491169
Alignment:
Q  562 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 661  Q
    |||||||||  |||||||||||| |||||||||| |||||||||||||||| ||||   |||||| |||||||||||||||||||||||||||||||||     
T  18491063 gattttgtcagttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacag 18491162  T
Q  662 caatggt 668  Q
    |||||||    
T  18491163 caatggt 18491169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 323 - 450
Target Start/End: Original strand, 27614435 - 27614562
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||  ||| |||||| |||||||||||||||||| |||||| | ||  ||| |||| |||||||||||||||||||||||||||  ||||  |    
T  27614435 ttgtcaaaattaggaatttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatcacaatcaaaatcgaaggattttactcaatgacttgag 27614534  T
Q  423 tagaatcgatataggaaattgtaaaatc 450  Q
    ||||| | ||||||||||||||||||||    
T  27614535 tagaaacaatataggaaattgtaaaatc 27614562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 388 - 662
Target Start/End: Original strand, 2912105 - 2912373
Alignment:
Q  388 aatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaa 487  Q
    |||| |||| ||||||||||||||||  ||||||||||||| | |||| |||||||||||||||||||| |||| || |||||||||  |||||| | ||    
T  2912105 aatcgaaattgaaggattttactcaactacttttgtagaattgttataagaaattgtaaaatcgcaatcaaaatcgacggattttacataaaaaaat-aa 2912203  T
Q  488 tactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttggg 579  Q
    |||||  || |||| ||           ||||||||||||| |  ||||||| ||||||        ||||||||||||||| ||||||  ||||||  |    
T  2912204 tactag-tacatgtcat-----------agtcataaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaag 2912291  T
Q  580 attctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 662  Q
    ||||||||||| |||| | ||||||||| || |||||||  |||||||||  |||||| ||||||||||||||||||||||||    
T  2912292 attctactatg-atttgaatcgttgaagatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 27890736 - 27890621
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||| ||| ||||||||| || || |||||||| ||| |||||  ||||  ||| ||||| ||||||||| ||||||||||||||||| |||||||    
T  27890736 ttgtcaaattcgagactttacttcaagttgaaagggagtagtaaaattggaactcgtaaaatcgtaatcaaaattgaaggattttactcaaggacttttg 27890637  T
Q  423 tagaatcgatatagga 438  Q
    ||||||||||||||||    
T  27890636 tagaatcgatatagga 27890621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 586 - 668
Target Start/End: Original strand, 5422798 - 5422880
Alignment:
Q  586 ctatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggt 668  Q
    |||| ||||| |||||||||||||||| |||||  ||||||| || ||||||| |||||||||||||||||||||||||||||    
T  5422798 ctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaatggt 5422880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 4841667 - 4841760
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 475  Q
    |||| ||||||||||| |||||||||||||||  |||||||||||||||  ||| ||||| |||||||||||||| |||| |||| ||||||||    
T  4841667 aatcacaatcaaaatcaaaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtattttacc 4841760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 588 - 663
Target Start/End: Original strand, 3573984 - 3574059
Alignment:
Q  588 atggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 663  Q
    |||||||| ||||||||||||||||||||||| | |||| ||||||||||| ||||||||||| ||||||| ||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 324 - 438
Target Start/End: Complemental strand, 31108504 - 31108390
Alignment:
Q  324 tgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgt 423  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||   |   ||| || ||||||||||||| || ||||||||| ||| ||||||||    
T  31108504 tgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaaccgcaatcaaaatcaaaagattttactaaaggacttttgt 31108405  T
Q  424 agaatcgatatagga 438  Q
    | ||| ||| |||||    
T  31108404 acaatagatgtagga 31108390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 573 - 662
Target Start/End: Original strand, 33583766 - 33583855
Alignment:
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 662  Q
    ||||||| |||| |||||||||| ||||||||||| | |  ||||||  ||||||||||||||| ||| |||||||| ||||||||||||    
T  33583766 ttttgggtttctgctatggatttgagtcgttgaagctaattaaagtctaaaaatcctggattttgggacttaagtcgcgattttgacaac 33583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 563 - 645
Target Start/End: Original strand, 4841946 - 4842026
Alignment:
Q  563 attttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaa 645  Q
    |||||| ||||| ||||||||| ||| |||||| |||||||||||||||| |||||| ||||||||   ||||||||||||||    
T  4841946 attttgcctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaatcc--aattttaggatttaa 4842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 323 - 406
Target Start/End: Complemental strand, 21355025 - 21354942
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattt 406  Q
    |||||||||| |||| |||||| || || |||||||||||| |||||||| ||  ||| |||||||||||||||||| ||||||    
T  21355025 ttgtcaaaattgggattttacttcaagttgaaagggaatagaaaaatcaggactcgtaaaatcgcaatcaaaatcgatggattt 21354942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 588 - 669
Target Start/End: Original strand, 10958239 - 10958320
Alignment:
Q  588 atggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 669  Q
    |||||||| | || ||||||||||   ||||| |||||||||| |||||  ||||||||||| |||||||||||||||||||    
T  10958239 atggatttgaatccttgaaggtgagtcaagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaacaatggtt 10958320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 638
Target Start/End: Original strand, 18490910 - 18490987
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttag 638  Q
    ||||||||||  |||||||||| | |||||| ||| |||||||||||||||| |||||  |||||| |||||||||||    
T  18490910 ggattttgtcatttttgggattatgctatgggtttcagtcgttgaaggtgaataaagttgcaaaatgctggattttag 18490987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 33583445 - 33583557
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaa-aatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    ||||||||||||||| |||||| | |||||||||||  |||||| ||||  ||   ||| ||||  |||||||||||||| |||||||| ||| ||||||    
T  33583445 ttgtcaaaatcgggattttacttccggtcgaaaggggttagcaataatcgtaaatcgtaaaatcaaaatcaaaatcgaag-attttacttaaggactttt 33583543  T
Q  422 gtagaatcgatata 435  Q
    ||||||||||||||    
T  33583544 gtagaatcgatata 33583557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 382 - 429
Target Start/End: Original strand, 8275368 - 8275415
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatc 429  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  8275368 aatcgcaattaaaatcgaaggattttactcaaggacttttgtaaaatc 8275415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 573 - 656
Target Start/End: Original strand, 8285760 - 8285843
Alignment:
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggatttt 656  Q
    |||||||||| | || ||||||| ||||||||||| |  |  ||||| |||||||||||||||||||| |||||||| ||||||    
T  8285760 ttttgggattttgctgtggatttgagtcgttgaagctagatcaagtcgcaaaatcctggattttaggacttaagtcgcgatttt 8285843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 352 - 438
Target Start/End: Original strand, 4596661 - 4596747
Alignment:
Q  352 gaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 438  Q
    |||||||| ||||||||| | ||  |||| ||| ||||||||||| |||||||| |||||||  |||||| |||||| |||||||||    
T  4596661 gaaagggagtagcaaaataaaaaattgtaaaattgcaatcaaaattgaaggattctactcaattacttttctagaattgatatagga 4596747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 438
Target Start/End: Original strand, 33592928 - 33593044
Alignment:
Q  321 gattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactt 419  Q
    ||||||||||||||||| ||| || ||  ||||||||||||| ||||||  ||| || ||| ||| |||||| |||||||| || |||||||||  ||||    
T  33592928 gattgtcaaaatcgggattttgcttcatatcgaaagggaataacaaaat-tgaaaatcgtaaaattgcaatcgaaatcgaatga-tttactcaactactt 33593025  T
Q  420 ttgtagaatcgatatagga 438  Q
    ||||||||| |||||||||    
T  33593026 ttgtagaattgatatagga 33593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 573 - 638
Target Start/End: Original strand, 18490998 - 18491063
Alignment:
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttag 638  Q
    |||| ||||||| |||||||||| |||| ||||||||||| |||||  |||||| |||||||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggattttag 18491063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 20432406 - 20432486
Alignment:
Q  357 ggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagg 437  Q
    |||||||||||||| ||| || ||| ||||||||||||||| |||| |||||||| ||  | ||||||||||||||||||||    
T  20432406 ggaatagcaaaatc-gaaaatcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgatatagg 20432486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 590 - 658
Target Start/End: Original strand, 8545019 - 8545087
Alignment:
Q  590 ggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttga 658  Q
    |||||||| | |||||| ||||  |||||| |||||||||  |||||||||||||| ||||||||||||    
T  8545019 ggatttaaattgttgaaagtgagtaaagtcgcaaaatcctaaattttaggatttaaatcgggattttga 8545087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 1179114 - 1179068
Alignment:
Q  384 tcgcaatcaaaatc-gaaggattttactcaagaacttttgtagaatc 429  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||    
T  1179114 tcgcaatcaaaatctgaaggattttactcaactacttttgtagaatc 1179068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 323 - 413
Target Start/End: Complemental strand, 23506192 - 23506102
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaa 413  Q
    ||||| |||| |||| ||||||  | |||||||| |||||||||||||  ||  |||| |||| |||| ||||||||||||||||| ||||    
T  23506192 ttgtcgaaatggggattttactttaagtcgaaagagaatagcaaaatcgaaaattgtaaaatcacaattaaaatcgaaggattttagtcaa 23506102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 323 - 664
Target Start/End: Complemental strand, 18844065 - 18843716
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| | ||  ||| ||||||||||||||||| || |||||||||||| |||||||    
T  18844065 ttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggacttttg 18843966  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  18843965 tagaatccatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatactaaatatatgttataaatggtatataatcata 18843866  T
Q  523 aatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || |||||||||||||        |||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  18843865 aatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtgaaga 18843766  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    ||||| |||||||||| ||| ||||||||||||||| ||||| |||||||    
T  18843765 aagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 325 - 666
Target Start/End: Complemental strand, 19579292 - 19578941
Alignment:
Q  325 gtcaaaatcgggactttactccaggtcgaaagggaata-gcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgt 423  Q
    ||||||||||||| |||||| |||||||||||||| || |||||||  | ||   || ||||||||||||||||||||||||| ||||||| ||||||||    
T  19579292 gtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatcgaaggatttcactcaaggacttttgt 19579193  T
Q  424 agaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc-caaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||| ||||| ||||||||||||||||||| |||| |||||||||||||  ||||||  |||||| ||||||||||||||||||||| |||||||||    
T  19579192 agaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaataataccaaatatatgttatgaatggtaaatagtcata 19579093  T
Q  523 aatgacctaatttataagaaa--------tcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || |||||||||||        |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  19579092 aatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaggtgaaga 19578993  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    || || ||||||||||||||||| ||||||||| || |||||||||||||||    
T  19578992 aaatcgcaaaatcctggattttatgatttaagttggaattttgacaacaatg 19578941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 323 - 665
Target Start/End: Complemental strand, 43235218 - 43234868
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||| ||||||||||| |  | |||||||||||||||||||||| ||   || |||||||||||||||||||||||||||||||||||||||||    
T  43235218 ttgtcaaaattgggactttacttcgagacgaaagggaatagcaaaatcagtactcataaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 43235119  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||  ||||||||||||||||||| |||| ||| ||||||||| ||| |   ||||| ||| |||||||||| |||||| ||||| ||||    
T  43235118 tagaatcgatataaaaaattgtaaaatcgcaatcaaaatcgattgattttaccaaaagataataatagtaagtatatgttataaatggtttatagacata 43235019  T
Q  523 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || || |||||||||||        |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  43235018 aatgacttagttgataagaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggtgaaga 43234919  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  43234918 aagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 325 - 666
Target Start/End: Original strand, 18051314 - 18051660
Alignment:
Q  325 gtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 424  Q
    ||||||||||||| ||||||  ||||||||||||||||| |||||| | || |||| |||||||||||||||| ||| |||||| | ||| |||||||||    
T  18051314 gtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatcaaagaattttattgaaggacttttgta 18051413  T
Q  425 gaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaa 524  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||| ||| |||||   |||||||||||||||||||| |||  ||||| ||||||||    
T  18051414 gaatcgatataggaaattgtaaaatcgcaagcaaaatcgatggatttaaccaaaaaataataatactaaatatatgttataaat--tatat-gtcataaa 18051510  T
Q  525 tgacctaatttataaga--------aatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaa 616  Q
    |||| || |||||||||        ||||||||||||||||||||||||||| ||||||| | |||||||||| ||||| ||||||||||| ||||||||    
T  18051511 tgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttgaagaaa 18051610  T
Q  617 gtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  18051611 gtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaatg 18051660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 382 - 664
Target Start/End: Original strand, 23172266 - 23172560
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    ||||| |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  23172266 aatcgtaatcaaaatcgaagaattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaaaa 23172365  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataa--------gaaatcgcaatcaaa----atcgatggattttgt 569  Q
    | |||||| |||||||||||||  ||||||||||||||||||||||| || |||||||         ||||||| ||||||    ||||||| |||||||    
T  23172366 aattaatattaaatatatgttacaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgt 23172465  T
Q  570 ctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  23172466 ctattttgggattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 323 - 654
Target Start/End: Original strand, 41688445 - 41688782
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||| | ||   || |||||||| |||||||||||||||||||| ||| |||||||    
T  41688445 ttgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttacttaaggacttttg 41688544  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||| ||||||||||||||||||| |||| |||| |||||| ||||||||  |||||||||||||||||||||||||||||||||| |||    
T  41688545 tagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttta-ccaaaaaaaataatactaaatatatgttatgaatggtatatagttata 41688643  T
Q  523 aatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||  || ||||||||        ||||||||||||||||||||| ||||||  |||||| | ||| ||||||  |||||||||||||||||||||||    
T  41688644 aatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtgaaga 41688743  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggatt 654  Q
    || |  |||||||| | |||||||||||||||| ||||||    
T  41688744 aaattgcaaaatcc-gaattttaggatttaagttgggatt 41688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 323 - 616
Target Start/End: Complemental strand, 20321293 - 20320992
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||| ||||||||||| |||||| ||| ||||||| |||||| | ||   || ||||||||||||||| ||||||||||||| ||| |||||||    
T  20321293 ttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactgaaggacttttg 20321194  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca-aaaaatttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||    
T  20321193 tagaatctatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccagaaaaaattaatattaaatatatgttataaatgatatatggtcat 20321094  T
Q  522 aaatgacctaatttataag-------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    ||||||| || ||||||||       |||||||||||||| | |||| ||||| |||||||||| ||| |||||||||||| |||| |||||||||||||    
T  20321093 aaatgacttagtttataagaatcgtaaaatcgcaatcaaagttgatgaattttatctattttggaattttactatggattttagtcattgaaggtgaaga 20320994  T
Q  615 aa 616  Q
    ||    
T  20320993 aa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 382 - 669
Target Start/End: Original strand, 21058994 - 21059288
Alignment:
Q  382 aatcgcaatcaaaatcgaaggatttt-actcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc-caaa 479  Q
    |||||||| |||||||||| |||||| ||| ||  |||||||||||||  ||||| |||||| ||||||||||||| |||| ||||||||||||  ||||    
T  21058994 aatcgcaaccaaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcgatggattttacaacaaa 21059093  T
Q  480 aaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtct 571  Q
    |||   ||||||||||||||||||| |||||| |||||||||||||||| |  ||||||||||||||        ||||||||||||||| |||||| ||    
T  21059094 aaaa--aatactaaatatatgttataaatggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcct 21059191  T
Q  572 attttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 669  Q
    |||| |||||||||| |||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  21059192 atttagggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaatggtt 21059288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 382 - 665
Target Start/End: Original strand, 38158102 - 38158383
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||| |||||||||||||||||||||||  | |||||||||||| || || |||||||||||||| ||||| |||||||||||||||||| |||||    
T  38158102 aatcgcaaccaaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggattttaccaaaaaa 38158201  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctat 573  Q
    | | |||||||||||||||||||         ||||||||||||||  || ||||||||||||||        ||| ||||||| |||||||||||||||    
T  38158202 aat-aatactaaatatatgttat---------atagtcataaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattttgtctat 38158291  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||||||||||||| ||||||| ||| |||||| || ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||    
T  38158292 tttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 38158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 323 - 657
Target Start/End: Original strand, 27339966 - 27340307
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    ||||||||||||| |||||||| || || ||||||||||||||||||| ||| || ||  ||||||||||||||||||||||||||||||| | ||||||    
T  27339966 ttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatc-gaaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggactttt 27340064  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa--att-taatactaaatatatgttatgaatggtatatagt 518  Q
    ||||||| |||||| |||||  ||||||||||||| |||| ||| ||||||||  |||||  ||  |||||||||||||||||||  |||||||||||||    
T  27340065 gtagaattgatataagaaatattaaaatcgcaatcaaaatcgatagattttacaaaaaaataataataatactaaatatatgttacaaatggtatatagt 27340164  T
Q  519 cataaatgacctaatttataagaaat--------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg 610  Q
        |||||| || ||||||||||||        | ||||||||||||||| |||||| |||||||  ||||||||||| ||||| ||||||||||| ||    
T  27340165 ----aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcctattttaagattctactatagatttgagtcgttgaagatg 27340260  T
Q  611 aagaaagtcacaaaatcctggattttaggatttaagtcgggattttg 657  Q
    ||||||||| ||||||| |  |||||| |||||||||||||||||||    
T  27340261 aagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 323 - 667
Target Start/End: Original strand, 22645506 - 22645850
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||| |||| |||||||| | |||| |||||||||||||||||    ||  ||| ||| ||||||||||||||||||||||||||||  |||| |     
T  22645506 ttgtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaattgcaatcaaaatcgaaggattttactcaaagacttcta 22645605  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaattt-aatactaaatatatgttatgaatggtatatagtcat 521  Q
     |      |||||||||||||||||||| ||||| |||| |||| |||||||| ||||||    || |||||| ||||||||||    ||||||||||||    
T  22645606 ca------atataggaaattgtaaaatcacaatcaaaatcgatgaattttaccaaaaaaaaaacaagactaaacatatgttatg----gtatatagtcat 22645695  T
Q  522 aaatgacctaa-tttataagaaat--------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaa 612  Q
    ||||||| | | ||||||||||||        |||||||||||| |||||| |||   |||||||||||| |||||||||||||| ||||||||||||||    
T  22645696 aaatgacattagtttataagaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttgaaggtgaa 22645795  T
Q  613 gaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatgg 667  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  22645796 gaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaatgg 22645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 323 - 521
Target Start/End: Original strand, 19042207 - 19042404
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||| ||| ||||||| ||| ||||||||||| |||||||||||  | ||  ||| |||| |||| |||||||||| |||||||| ||| |||||||    
T  19042207 ttgtcaatatcaggactttgctctaggtcgaaaggaaatagcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttacttaaggacttttg 19042306  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||  ||||||||||||||||||||  ||| ||||||||||||    
T  19042307 tagaatcgatataggaaattgtaaaatcgcaatc-aaattgatggattttatccaaaaagattaatactaaatatatgttagaaattgtatatagtcat 19042404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 20923842 - 20923718
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  20923842 aaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagga 20923743  T
Q  641 tttaagtcgggattttgacaacaat 665  Q
    |||||||||||||||||||||||||    
T  20923742 tttaagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 323 - 525
Target Start/End: Original strand, 43005638 - 43005841
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||| ||| ||  || |||||||| ||||| ||| ||  ||  |||| ||||||||||||||| ||| ||||||||||||   ||||||    
T  43005638 ttgtcaaaatcgggattttgctttagatcgaaaggaaatagaaaattcgaaaattgtaaaatcgcaatcaaaattgaaagattttactcaacttcttttg 43005737  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    ||||||||||||||||||| |||||||||||||  |||| |||||||| |||| ||| |||  |||| ||||||||||||||| ||| ||||| | ||||    
T  43005738 tagaatcgatataggaaatcgtaaaatcgcaattaaaatcgatggattgtaccaaaacaaaaataatgctaaatatatgttataaattgtatacactcat 43005837  T
Q  522 aaat 525  Q
    ||||    
T  43005838 aaat 43005841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 41427769 - 41427654
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||| ||||||||| |  ||||||||||| |||||||||| | ||  ||| |||||||||||||||||||||||||||||| || |||||||    
T  41427769 ttgtcaaaatcgagactttacttcgagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcgaggacttttg 41427670  T
Q  423 tagaatcgatatagga 438  Q
    ||||||||||||||||    
T  41427669 tagaatcgatatagga 41427654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 326 - 428
Target Start/End: Original strand, 15051879 - 15051981
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| || ||||||| ||| |||||||||| | ||  ||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  15051879 tcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 15051978  T
Q  426 aat 428  Q
    |||    
T  15051979 aat 15051981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 485 - 616
Target Start/End: Complemental strand, 19979787 - 19979648
Alignment:
Q  485 taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctatttt 576  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||        ||||||||||||||| ||||||||||  | ||||    
T  19979787 taataataaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgtttt 19979688  T
Q  577 gggattctactatggatttaagtcgttgaaggtgaagaaa 616  Q
    |||||||||| ||| |||| ||||||||||| ||||||||    
T  19979687 gggattctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 323 - 528
Target Start/End: Complemental strand, 26021661 - 26021465
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||| ||| || |||| | |||||||| ||||||||| |||       |||| |||||||||||| ||||||||||||||  |||| ||    
T  26021661 ttgtcaaaatcgggattttgcttcaggccaaaagggaagagcaaaatc-gaa-------aatcacaatcaaaatcgtaggattttactcaactacttgtg 26021570  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaat-ttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    ||  ||||||||| ||||| |||||||| ||||   ||  |||| |||||||| ||| |||  |||| ||||||||||||||| ||| ||||||||||||    
T  26021569 taacatcgatataagaaatcgtaaaatcacaat--taaacgatgcattttaccaaaacaataataatgctaaatatatgttataaattgtatatagtcat 26021472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  591 gatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 663  Q
    ||||| ||||||||||||||||||||||||||||||| |  ||||||| |||||||| |||||||||||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 19377889 - 19377841
Alignment:
Q  387 caatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 435  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19377889 caatcaaaatcgaaggattttactcaaggacttttgtagaatcgatata 19377841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 22984643 - 22984695
Alignment:
Q  386 gcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 438  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  22984643 gcaatcaaaatcgaaggattttactcaaggaattttgtagaatcgatatagga 22984695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 347 - 528
Target Start/End: Complemental strand, 24648335 - 24648161
Alignment:
Q  347 aggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgta 445  Q
    |||||||||||||| || |||||| ||| || ||| ||||| |||||||||| |||||||||||||||  |||||||||||||| |||||         |    
T  24648335 aggtcgaaagggaagagtaaaatc-gaaaatcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatcaatata--------aa 24648245  T
Q  446 aaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    ||||||||||| |||| | ||||||||||  ||| | |  |||| |||||||||| |||| ||| |||||||||||||||||||    
T  24648244 aaatcgcaatcaaaatcggtggattttactaaaacataaataatgctaaatatatattataaattgtatatagtcataaatgac 24648161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 6852345 - 6852392
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatc 370  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6852345 ttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatc 6852392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 663
Target Start/End: Complemental strand, 20320990 - 20320926
Alignment:
Q  599 tcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 663  Q
    ||||||||||||||||||||  ||||||| |  ||||||||||||| || |||||||||||||||    
T  20320990 tcgttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaaca 20320926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 573 - 666
Target Start/End: Original strand, 13342024 - 13342116
Alignment:
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||| ||||||| | ||||||||   ||| |||||||||  ||||||| |||||||||||||||  ||||||| ||| ||||||||||||||||    
T  13342024 tttttggattctgcaatggatttggatcgatgaaggtgagtaaagtca-aaaatcctggattttgcgatttaaatcgcgattttgacaacaatg 13342116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 592 - 661
Target Start/End: Complemental strand, 24106714 - 24106645
Alignment:
Q  592 atttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 661  Q
    |||| ||||||||  ||||||||||||  |||||||||| |||||| ||||||| || ||||||||||||    
T  24106714 atttgagtcgttgctggtgaagaaagttgcaaaatcctgaattttatgatttaaatcaggattttgacaa 24106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 13341476 - 13341591
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    ||||||||||||||| ||| || ||  |||||||||||||| |||||   || || ||| |||||||| | |||| |||||| ||||||| |  ||||||    
T  13341476 ttgtcaaaatcgggattttgcttcaaatcgaaagggaatagaaaaattgaaaaatcgtaaaatcgcaaacgaaattgaagga-tttactcgactactttt 13341574  T
Q  422 gtagaatcgatatagga 438  Q
    |||||||||||||||||    
T  13341575 gtagaatcgatatagga 13341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 23172223 - 23172267
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaa 367  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||    
T  23172223 ttgtcaaaatcggaactttacttcaggttgaaagggaatagcaaa 23172267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 576 - 668
Target Start/End: Complemental strand, 41427173 - 41427081
Alignment:
Q  576 tgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggt 668  Q
    ||||||||| |||||||||| ||||||||||| |    |||||  ||||| |||||||||| ||| | |||||| |||||||||||| |||||    
T  41427173 tgggattctgctatggatttgagtcgttgaagctacgcaaagttgcaaaaacctggattttgggactgaagtcgcgattttgacaaccatggt 41427081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 435
Target Start/End: Complemental strand, 30799682 - 30799635
Alignment:
Q  388 aatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 435  Q
    |||| ||||||||||||||||| |||  ||||||||||||||||||||    
T  30799682 aatcgaaatcgaaggattttacacaactacttttgtagaatcgatata 30799635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 598 - 664
Target Start/End: Original strand, 13350122 - 13350188
Alignment:
Q  598 gtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||| |||||||||  |||||  ||||||| |||||||| |||||||||| | ||||||||||||||    
T  13350122 gtcgatgaaggtgagtaaagttgcaaaatcttggattttgggatttaagttgtgattttgacaacaa 13350188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 215; Significance: 1e-117; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 21846053 - 21846398
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | ||   || ||||||||||||||||||||||||||||||||| |||||||    
T  21846053 ttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 21846152  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||| |||  |||||||| |||    
T  21846153 tagaatcgatataagaaattgtaaaatcgcaatcaaaatagatgaattttacccaaaaaaattaatactaaatatatgttataaattatatatagttata 21846252  T
Q  523 aatgacctaatttataa--gaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtca 620  Q
    |||||| |   | | ||   ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||| ||||||     
T  21846253 aatgacgtttatgaaaaataaaatcgcaatcaaaatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcg 21846352  T
Q  621 caaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  21846353 caaaatcctggattttaggatttaactcgggattttgacaacaatg 21846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 323 - 668
Target Start/End: Original strand, 9351842 - 9352195
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||  ||||||||| ||||||||||| ||||||||||||| | ||  ||| ||||||||||||||||| |||||||||  |||| |||||||    
T  9351842 ttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaaggacttttg 9351941  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||| |||||||||||||||||||| ||||| |||| |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |    
T  9351942 tagaatctatataggaaattgtaaaatcacaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttataaatggtatatagtcaaa 9352041  T
Q  523 aatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || ||||||||        ||||||||||||||||||| |||||||||||||||||||| ||| |||| ||||| |||| |||||||||||||    
T  9352042 aatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattttgtctattttgggactctgctatagatttgagtctttgaaggtgaaga 9352141  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggt 668  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9352142 aagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaatggt 9352195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 18304597 - 18304941
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||| ||| |||||||||||| || |||||||||       ||| ||||||| ||||||||||||||||||||| ||| |||||||    
T  18304597 ttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaatc-------gtaaaatcgcattcaaaatcgaaggattttactaaaggacttttg 18304689  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||    
T  18304690 tagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaaaaaattaatactaaatatacgttatgaatggtatatagtcata 18304789  T
Q  523 aatgacctaatttataag-------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcg-ttgaaggtgaaga 614  Q
    |||||| ||  |||||||       |||||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||| |||||||||||||    
T  18304790 aatgacttagcttataagaaatcgtaaatcgcaatcaaaattgatggattttgtctattttgagattctactatgaatttgagtcgtttgaaggtgaaga 18304889  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  18304890 aagtcgcaaaatactggattttaggatttaagttgggattttgacaacaatg 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 327 - 666
Target Start/End: Original strand, 9954816 - 9955165
Alignment:
Q  327 caaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtaga 426  Q
    ||||||||| ||||||||  |||||||||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||  ||| ||||||  |||    
T  9954816 caaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaaga 9954915  T
Q  427 atcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt--taatactaaatatatgttatgaatggtatatagtcataaa 524  Q
    ||| |||||||||||||||||||||||||| | || |||||||||||| ||||||| |  ||||||| |||||||||||| |||||||||||||||||||    
T  9954916 atccatataggaaattgtaaaatcgcaatcaagatcgatggattttacacaaaaaaataataatactgaatatatgttataaatggtatatagtcataaa 9955015  T
Q  525 tgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaa 616  Q
    ||||||| ||||||||        ||||||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||    
T  9955016 tgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgggattctacattggatttaagtcgttgaaggtgaagaaa 9955115  T
Q  617 gtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||| |||||||||  |||||||||||||||| ||||||||||||||||||    
T  9955116 gtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 9955165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 323 - 669
Target Start/End: Complemental strand, 13100540 - 13100187
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||| ||||  ||| |||||||||||||||| |||||||||||||||| || ||||    
T  13100540 ttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggacatttg 13100441  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||||||||| |||||  ||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||||||  |||||||||||||||||    
T  13100440 tagaatcgatataagaaatcttaaaatcgcaatcaaaatcgatggattttacccaaaaaa-taaatactaaatatatgttacaaatggtatatagtcata 13100342  T
Q  523 aatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| |  ||||||||        |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||| |||||||    
T  13100341 aatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgtgaaga 13100242  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 669  Q
    |||||  |||||||| |||||||| |||||||| ||||||||||||| |||||||    
T  13100241 aagtcgtaaaatcctcgattttagaatttaagttgggattttgacaataatggtt 13100187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 25146547 - 25146898
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||||||| |||   ||| |||||||||||||||||||||||||||||||||  |||| |    
T  25146547 ttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtctttcg 25146646  T
Q  423 tagaatcgatataggaaattgt-aaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    |||||||||||||| ||||| | |||||||||||| |||| |||||||||||||||||||| || |||||||||||| ||||| ||| ||||||||||||    
T  25146647 tagaatcgatatagaaaattctaaaaatcgcaatcaaaatcgatggattttacccaaaaaaattgatactaaatatacgttataaattgtatatagtcat 25146746  T
Q  522 aaatgacctaatttataag-------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||| || || ||||||||       |||||||||| ||||| |||| | |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25146747 aaataacttagtttataagaaatcgtaaatcgcaattaaaattgatgtactttgtctattttgggattctactatgaatttgagtcgttgaaggtgaaga 25146846  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||| |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  25146847 aagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaatg 25146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 323 - 665
Target Start/End: Complemental strand, 23529006 - 23528656
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||| |||||| | |||||  ||| |||| || || ||| | ||  ||| ||||||||||||||||||||||||||||||||| |||||||    
T  23529006 ttgtcaaaatcggaactttatttcaggttaaaaaggaacagtaagatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 23528907  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||   ||||| |||||||| ||||| |||||||||||||||||    
T  23528906 tagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaataataataataataaatatacgttataaatggtatatagtcata 23528807  T
Q  523 aatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| |  ||||||||||        |||||| ||||||||||| ||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  23528806 aatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagattttgcctattttaggattctactatggatttgagtcgttgaagatgaaga 23528707  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||| |||||||||| |||||| ||||||||| |||||||||||||||||    
T  23528706 aagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaat 23528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 336 - 663
Target Start/End: Original strand, 19009740 - 19010073
Alignment:
Q  336 gactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 435  Q
    ||||||||| ||| ||||||||||||||||||||| | ||  ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  19009740 gactttacttcagatcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatata 19009839  T
Q  436 ggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaattt 535  Q
    ||||||||||||||||||||| ||||   |||||||||||| |||||   |||| |||  ||||||||| ||||||||||||| ||||||||| ||||||    
T  19009840 ggaaattgtaaaatcgcaatcaaaatcattggattttaccccaaaaaaaaaatattaa--atatgttataaatggtatatagttataaatgacttaattt 19009937  T
Q  536 ataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatc 627  Q
    |||||        ||||||||||||||||||||||||||||  |||||| | ||| ||||||||||||||||| ||||||||||| |||||| |||||||    
T  19009938 ataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatc 19010037  T
Q  628 ctggattttaggatttaagtcgggattttgacaaca 663  Q
    ||| ||||||||||||||||| ||||||||||||||    
T  19010038 ctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 323 - 658
Target Start/End: Original strand, 16125234 - 16125580
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||| |||||||| |||||||| |||||||||||||||||| |||||  | ||  ||| ||||||||||||||||||||||||||||||||| || ||||    
T  16125234 ttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttg 16125333  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||  |||||||||||   |||||||||||||||||||| ||||||||||| |||||    
T  16125334 tagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggacgttacccaaaaataataatactaaatatatgttataaatggtatatattcata 16125433  T
Q  523 aatgacctaatttataa--------gaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg---a 611  Q
    |||||| || |||||||         ||||||||||||||||| |||||||||| |||||||  |||| ||||||||||||| |||||||||||||   |    
T  16125434 aatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaaa 16125533  T
Q  612 agaaagtcacaaaatcctggattttaggatttaagtcgggattttga 658  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||    
T  16125534 agaaagtcgcaaaatcctgaattttaggatttaagtcaggattttga 16125580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 321 - 665
Target Start/End: Original strand, 13276036 - 13276395
Alignment:
Q  321 gattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatca------------aaatcgaaggatttta 408  Q
    ||||||||||||||||||||||||   ||||||||| ||||||||||||||| ||  ||| |||||||||||            |||||||||||||  |    
T  13276036 gattgtcaaaatcgggactttact---ggtcgaaagagaatagcaaaatcaggactcgtaaaatcgcaatcagaatcaaaatcaaaatcgaaggatt--a 13276130  T
Q  409 ctcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaat 508  Q
    || ||| | |||||||||||||||||| ||||||||||||| |||||| |||| |||||| | |||| |||||   |||||||||||||||||||| |||    
T  13276131 cttaaggaattttgtagaatcgatataagaaattgtaaaattgcaatcaaaatcgatggactataccaaaaaataataatactaaatatatgttataaat 13276230  T
Q  509 ggtatatagtcataaatgacctaatttataagaaat--------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtc 600  Q
    | |||||||||||||||||| |||||||||||||||        |||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |||    
T  13276231 gatatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttaggattctactatggatttaggtc 13276330  T
Q  601 gttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  13276331 gttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 323 - 664
Target Start/End: Original strand, 42179850 - 42180193
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| | | |||||| | |||  ||||||||||||| ||||  |||  ||| ||||||||||||||||||||||||||| || || |||||||    
T  42179850 ttgtcaaaatcagaaatttacttcgggttaaaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggattttattcgaggacttttg 42179949  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt-taatactaaatatatgttatgaatggtatatagtcat 521  Q
    ||||       ||||||||||||||| | ||||| |||| ||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||||||||    
T  42179950 taga-------taggaaattgtaaaaccacaatcaaaatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtatatagtcat 42180042  T
Q  522 aaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaag 613  Q
    ||||||| || ||||||||||||||        ||||||||||||||| |||||| ||||||||  |||||||||||||||| | |||||||||| ||||    
T  42180043 aaatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaaggggaag 42180142  T
Q  614 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||| |||||||||| ||||||| |||||||| ||||||||||||||||    
T  42180143 aaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 321 - 664
Target Start/End: Original strand, 17869527 - 17869873
Alignment:
Q  321 gattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttt 420  Q
    ||||||||||||||||||| || | |||||| |||||||| ||||||||| | ||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  17869527 gattgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggacttt 17869626  T
Q  421 tgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtca 520  Q
    | ||||||| || ||  ||||||||||||||||||| |||| |||| |||||||| |||||   |||||||||||||||||| | ||| |||||| || |    
T  17869627 tatagaatcaatgtaaaaaattgtaaaatcgcaatcaaaatcgatgaattttaccaaaaaataataatactaaatatatgttgtaaatagtatatggtta 17869726  T
Q  521 taaatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaa 612  Q
    |||| ||| || |||| ||||||||        |||||||||||||| | |||||| ||||||| |||||||||| |||||||| ||||| |||||||||    
T  17869727 taaaagacttagtttaaaagaaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggtgaa 17869826  T
Q  613 gaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    ||||||| ||||||||     |||| |||||||||| |||||||||||||||    
T  17869827 gaaagtcgcaaaatcc-----tttaagatttaagtcaggattttgacaacaa 17869873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 323 - 663
Target Start/End: Complemental strand, 12513621 - 12513283
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||| |||| ||| || |||||| |||| ||| |||||||||   |  |||| |||||||| ||||||| |||||||||||||||  |||| ||    
T  12513621 ttgtcaaaattgggattttgcttcaggtcaaaagagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatcaaaggattttactcaactacttctg 12513522  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||       || |||||||||||||||||||| |||| ||| ||||||||| ||||||| ||||| |||||||  |||||  ||||||||||||| ||    
T  12513521 taga-------taagaaattgtaaaatcgcaatcaaaatcgatagattttacc-aaaaaatataatattaaatat--gttatatatggtatatagtcgta 12513432  T
Q  523 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || ||||||||||||||        ||||||||||||||||||||||  ||||||  |||| |||||||||||| ||||||||||| ||||||    
T  12513431 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttactatggatttgagtcgttgaagctgaaga 12513332  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 663  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  12513331 aagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 353 - 670
Target Start/End: Original strand, 9128647 - 9128974
Alignment:
Q  353 aaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgc 452  Q
    |||||||||||||||||| | ||  ||| |||| | |||||||||||||||||||||| ||| | |||||||| |||||||||| |||||||||||||||    
T  9128647 aaagggaatagcaaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttactaaaggatttttgtaggatcgatatagaaaattgtaaaatcgc 9128746  T
Q  453 aatcgaaattgatggattttacccaaaaaatt--taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaat------ 544  Q
    |||| ||||| ||| |||||||  |  | | |  |||||||||| ||||||||| ||||||||||||||| |||| || || ||||||||||||          
T  9128747 aatcaaaatttatgaattttacaaatgataataataatactaaagatatgttataaatggtatatagtcaaaaataacttagtttataagaaatcgtcaa 9128846  T
Q  545 --cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatt 642  Q
      ||||||||||||||||| ||||||||||||||  |||||||||||  |||| ||||||| || |||||||||||| ||| |||||   ||||||||||    
T  9128847 atcgcaatcaaaatcgatgaattttgtctattttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggatt 9128946  T
Q  643 taagtcgggattttgacaacaatggttg 670  Q
    ||||||| |||||| |||||||| ||||    
T  9128947 taagtcgtgattttaacaacaatagttg 9128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 439 - 666
Target Start/End: Original strand, 9327109 - 9327345
Alignment:
Q  439 aattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaa--tgacctaattta 536  Q
    |||||||||||||||||| |||| |||| ||||||||||||||| | |||||||||||||| |||| ||||||||||||||| |||  |||| || ||||    
T  9327109 aattgtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaat-aatactaaatatatattataaatggtatatagtcaaaaaaatgacttagttta 9327207  T
Q  537 taagaaat--------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcc 628  Q
    ||||||||        |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||| ||||| ||    
T  9327208 taagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccc 9327307  T
Q  629 tggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |  ||||||||||||||||| ||||||| |||||||||    
T  9327308 taaattttaggatttaagtcaggattttaacaacaatg 9327345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 323 - 456
Target Start/End: Original strand, 14074262 - 14074395
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||  ||||   || |||| |||||||||||||||||||||||||||| |||||||    
T  14074262 ttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttactcaaggacttttg 14074361  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatc 456  Q
    ||||||||||||||||||||||||||||||||||    
T  14074362 tagaatcgatataggaaattgtaaaatcgcaatc 14074395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 382 - 546
Target Start/End: Complemental strand, 47786149 - 47785986
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc-caaaa 480  Q
    |||| ||| |||||||||||||||||||||||  ||||||||||||| |||||| |||||   ||||||| |||  |||| ||||||||||||| |||||    
T  47786149 aatcacaaccaaaatcgaaggattttactcaactacttttgtagaattgatataagaaatcacaaaatcgaaataaaaatcgatggattttaccacaaaa 47786050  T
Q  481 aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 546  Q
    |||  ||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  47786049 aat--aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcg 47785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 541 - 666
Target Start/End: Original strand, 41032675 - 41032800
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    |||||||||| ||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||| || |||||||||| ||| || ||    
T  41032675 aaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctgaattctacga 41032774  T
Q  641 tttaagtcgggattttgacaacaatg 666  Q
    ||||||||| ||||||||||||||||    
T  41032775 tttaagtcgagattttgacaacaatg 41032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 393 - 576
Target Start/End: Complemental strand, 32881600 - 32881416
Alignment:
Q  393 aaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatacta 492  Q
    |||||||||||||||||||||  || ||||||||||||||||| |||||||||||||||||||| ||||  |||| |||||  |||||     |||||||    
T  32881600 aaatcgaaggattttactcaactacgtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcaatggctttta--caaaa-----aatacta 32881508  T
Q  493 aatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctatttt 576  Q
    |||||||||||| |||||||||||||||| |||||| |||||||||||        ||||||||||||||||||||| |||||| |||||||    
T  32881507 aatatatgttataaatggtatatagtcatgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttt 32881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 323 - 475
Target Start/End: Original strand, 17055699 - 17055850
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||| |||||||  |||||||||||| || | |||||| | ||  ||| ||||||||||||||||||||||||||||||||  |||||||    
T  17055699 ttgtcaaaatcgggtctttactt-aggtcgaaaggggattgtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttg 17055797  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 475  Q
    ||||||||||| | ||||||||||||| |||||| |||| |||||||||||||    
T  17055798 tagaatcgatacaagaaattgtaaaattgcaatcaaaatggatggattttacc 17055850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 541 - 666
Target Start/End: Original strand, 17056004 - 17056129
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    |||||||||||||||||||||||||||   ||||||   |||||||||||||| | |||||||||||||| ||||| |  ||||||||||||||||||||    
T  17056004 aaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctggattttagga 17056103  T
Q  641 tttaagtcgggattttgacaacaatg 666  Q
    ||||| || |||||||||| ||||||    
T  17056104 tttaaatcaggattttgactacaatg 17056129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 561 - 666
Target Start/End: Original strand, 18337547 - 18337651
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    |||||||| |||||||||| |||| |||||||||| |||||||||||||||| |||||  ||||||||||||||||||| | ||||||||||||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttagg-tataagtcgggattttgaca 18337645  T
Q  661 acaatg 666  Q
    ||||||    
T  18337646 acaatg 18337651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 326 - 438
Target Start/End: Original strand, 17197311 - 17197423
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| || ||||||||||| |||||||||| ||||  ||| ||||||||  ||||||||||||||||||||||| ||||||||||    
T  17197311 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttactcaaggacttttgtag 17197410  T
Q  426 aatcgatatagga 438  Q
    |||| || |||||    
T  17197411 aatcaatgtagga 17197423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 590 - 665
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  590 ggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 321 - 509
Target Start/End: Complemental strand, 16434861 - 16434673
Alignment:
Q  321 gattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactt 419  Q
    ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||| ||| || ||| ||| |||||||||||||||||||||||||| | |||||    
T  16434861 gattgtcaaaatcaggatttttctctaggtcaaaagggaatagcaaaatc-gaaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaactt 16434763  T
Q  420 ttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa--aaaatttaatactaaatatatgttatgaatg 509  Q
    ||||||||| ||||||  | ||   |||||||||||| |||| |||||||| |||| ||  |||| |||||  |||||||||||||| ||||    
T  16434762 ttgtagaattgatata--agataacaaaatcgcaatcaaaatcgatggattctaccaaaacaaaaattaatgataaatatatgttataaatg 16434673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 570 - 665
Target Start/End: Original strand, 14074404 - 14074499
Alignment:
Q  570 ctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||||||  ||||||||| ||||||| ||||||||||  ||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaat 14074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 323 - 472
Target Start/End: Original strand, 41032552 - 41032701
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    |||||||||| |||| |||||| ||||| ||||| ||| ||||||||  ||  || ||| ||||||||  |||||||||| |||||||||||  | ||||    
T  41032552 ttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaatt-gataatcgtaaaatcgcaactaaaatcgaagaattttactcaactagtttt 41032650  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttt 472  Q
    |||||||||||||| |||||||||||||||||||  |||| ||||||||||    
T  41032651 gtagaatcgatataagaaattgtaaaatcgcaattaaaatcgatggatttt 41032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 493 - 647
Target Start/End: Complemental strand, 18228380 - 18228230
Alignment:
Q  493 aatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatc-------gcaatcaaaatcgatggattttgtctattttgggattcta 585  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||||||        |||||||||| ||||||||||| ||||||||||||||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaaatccaatcaaaattgatggattttgcctattttgggattcta 18228281  T
Q  586 ctatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagt 647  Q
    |||           |||||||||||| |||| ||  |||||| |||||||||||||||||||    
T  18228280 cta-----------cgttgaaggtgatgaaaatcgtaaaatcttggattttaggatttaagt 18228230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 323 - 456
Target Start/End: Complemental strand, 30619290 - 30619159
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    ||||||||||||||| ||| || ||||||||||| ||| ||||||||| ||  || ||| ||||||||  ||||||||||||||||||||||  ||||||    
T  30619290 ttgtcaaaatcgggatttt-cttcaggtcgaaagagaagagcaaaatc-gacaatcgta-aatcgcaacaaaaatcgaaggattttactcaactactttt 30619194  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatc 456  Q
    |||||||||||||   |||||||||||||||||||    
T  30619193 gtagaatcgatatgaaaaattgtaaaatcgcaatc 30619159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 578 - 665
Target Start/End: Original strand, 12800623 - 12800710
Alignment:
Q  578 ggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||| |||||| ||||| |||||||||| ||||||||||||  ||||||||  |||||||||||||||| |||||||| ||||||||    
T  12800623 ggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 599 - 666
Target Start/End: Original strand, 34478833 - 34478900
Alignment:
Q  599 tcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||||||||| |||||||||    
T  34478833 tcgttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaatg 34478900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 561 - 673
Target Start/End: Complemental strand, 8772809 - 8772696
Alignment:
Q  561 ggattttgtctatttt-gggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgac 659  Q
    ||||||||||| |||| |||| ||| |||||||||| ||| ||||||| |  | |||||| |||||| ||||||||| ||||||||||||||||| |||     
T  8772809 ggattttgtctttttttgggactctgctatggatttgagttgttgaagctacacaaagtcgcaaaattctggattttgggatttaagtcgggattctgat 8772710  T
Q  660 aacaatggttgtaa 673  Q
    ||| ||| ||||||    
T  8772709 aaccatgcttgtaa 8772696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 9954775 - 9954827
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaac 375  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  9954775 ttgtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaatcggaac 9954827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 39783959 - 39783865
Alignment:
Q  170 caccaccttccttgttttgtgggcaggc-----aaagaggtaattggttaactgctattcgcaatctgatcgggacaatttccatctaaataaata 260  Q
    |||||||||||||||||||||| ||| |     |||||||||||||| ||| | |||||| |||||| |||| |||||||||||||||||||||||    
T  39783959 caccaccttccttgttttgtggccagacaaattaaagaggtaattggctaa-ttctattcacaatctaatcgagacaatttccatctaaataaata 39783865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 436
Target Start/End: Original strand, 12002640 - 12002751
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||| |  | ||||||||||| |||||||||  | ||    | |||| |||| |||||||||||||||||||||   |||||||    
T  12002640 ttgtcaaaatcgggactttaatttaagtcgaaagggagtagcaaaattgggactc--aaaatcacaataaaaatcgaaggattttactcatagacttttg 12002737  T
Q  423 tagaatcgatatag 436  Q
    ||||||||||||||    
T  12002738 tagaatcgatatag 12002751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 325 - 436
Target Start/End: Complemental strand, 8773613 - 8773505
Alignment:
Q  325 gtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 424  Q
    |||||||||| |||||||||  | ||||||||||||||||| ||| |   |  ||| ||||||||| ||||| ||||||||||||| ||| | |||||||    
T  8773613 gtcaaaatcgagactttacttaaagtcgaaagggaatagcagaatga---ctcgtaaaatcgcaattaaaattgaaggattttacttaaggatttttgta 8773517  T
Q  425 gaatcgatatag 436  Q
    |||| |||||||    
T  8773516 gaattgatatag 8773505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 662
Target Start/End: Original strand, 27917477 - 27917578
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    ||||||||  ||| ||| |||||| ||||| ||||  || ||||||||| || ||| || ||||||||| ||||| || |||||||||||||||||||||    
T  27917477 ggattttgcttatcttgtgattctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgaca 27917576  T
Q  661 ac 662  Q
    ||    
T  27917577 ac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 669
Target Start/End: Original strand, 27502239 - 27502335
Alignment:
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 669  Q
    |||||||||||| |||||||||| ||||||||||| | || ||||| ||||||  ||||||||| | | ||||| || ||||||| |||| ||||||    
T  27502239 ttttgggattctgctatggatttgagtcgttgaagttaaacaaagttacaaaaatctggattttggaacttaagccgcgattttggcaaccatggtt 27502335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 15382262 - 15382159
Alignment:
Q  166 atagcaccaccttccttgttttgtgggcaggcaaagaggtaattggttaactgctattcgcaatctgatcgggacaatttccatctaaataaataacagt 265  Q
    ||||||||| ||| |||||||||||| |||||| |||||| ||||||||| || |||||||  |   ||||||| |||||  ||||| ||||||| ||||    
T  15382262 atagcaccatcttacttgttttgtggccaggcatagaggtgattggttaagtgttattcgctgtaccatcgggataatttttatctagataaatagcagt 15382163  T
Q  266 gctc 269  Q
    ||||    
T  15382162 gctc 15382159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 667
Target Start/End: Complemental strand, 24117111 - 24117005
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    ||||||||| | ||||||||||||| |||  |||| | |||||||||||||| |||||   |||||| |  ||||||| |||||| | || |||||||||    
T  24117111 ggattttgtttgttttgggattctaatataaatttgaatcgttgaaggtgaataaagttgtaaaatcttaaattttagaatttaaattggaattttgaca 24117012  T
Q  661 acaatgg 667  Q
    |||||||    
T  24117011 acaatgg 24117005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 359 - 408
Target Start/End: Original strand, 9321550 - 9321599
Alignment:
Q  359 aatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggatttta 408  Q
    |||||||||||| ||||  ||| |||||||||||||||||||||||||||    
T  9321550 aatagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggatttta 9321599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 419
Target Start/End: Original strand, 27502197 - 27502230
Alignment:
Q  386 gcaatcaaaatcgaaggattttactcaagaactt 419  Q
    ||||||||||||||||||||||||||||||||||    
T  27502197 gcaatcaaaatcgaaggattttactcaagaactt 27502230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 666
Target Start/End: Complemental strand, 47785836 - 47785791
Alignment:
Q  621 caaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||    
T  47785836 caaaatcctgaattttaggatttatgttgggattttgacaacaatg 47785791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 18228533 - 18228481
Alignment:
Q  404 ttttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatc 456  Q
    ||||||||||   ||||||||||||||||||| ||||| ||||||||||||||    
T  18228533 ttttactcaacttcttttgtagaatcgatataagaaatcgtaaaatcgcaatc 18228481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 629 - 666
Target Start/End: Complemental strand, 16417345 - 16417308
Alignment:
Q  629 tggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  16417345 tggatattaggatttaagtcgcgattttgacaacaatg 16417308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 22789474 - 22789421
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 435  Q
    |||| ||||||||||| |||||||||||| | | ||||||||||| ||||||||    
T  22789474 aatcacaatcaaaatcaaaggattttactaatggacttttgtagactcgatata 22789421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 323 - 665
Target Start/End: Complemental strand, 9770462 - 9770112
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| | ||  ||| |||||||||||||||||||||||||||||||||  ||||||    
T  9770462 ttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtcttttg 9770363  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9770362 tagaatcgatatagcaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttatgaatggtatatagtcata 9770263  T
Q  523 aatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    | | || || ||||||||||        |||||||||||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |    
T  9770262 agtaacttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattttgtctattttaggattctactatggatttgagtcgttgaaggtgaaaa 9770163  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||||||||||||| |||||||| |||||||||| |||||| ||||||||    
T  9770162 aagtcacaaaatcctagattttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 324 - 665
Target Start/End: Original strand, 9911191 - 9911541
Alignment:
Q  324 tgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgt 423  Q
    |||||||||  |||||||||| ||  |||||||||||||| |||||| | ||  ||| ||||||||| |||| ||||||||||||||| |||||||||||    
T  9911191 tgtcaaaattaggactttacttcatatcgaaagggaatagtaaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttactcgagaacttttgt 9911290  T
Q  424 agaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataa 523  Q
    |||||||||||| |||||||||||||||||||| |||| |||||| |||||| |||||   ||||||| |||||||||||| ||||||||||||||||||    
T  9911291 agaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatacttaatatatgttataaatggtatatagtcataa 9911390  T
Q  524 atgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaa 615  Q
    ||||| || ||||||||        |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| | ||||||||||||||||    
T  9911391 atgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaagaa 9911490  T
Q  616 agtcacaaaatcctggattttagga-tttaagtcgggattttgacaacaat 665  Q
    |||  ||||||| || ||||||||| ||||| ||||||||| |||||||||    
T  9911491 agttgcaaaatcttgaattttaggattttaaatcgggatttagacaacaat 9911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 23064740 - 23065093
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||| ||||  ||| ||||||||||||||| ||||||||||| ||||| |||||||    
T  23064740 ttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttattcaaggacttttg 23064839  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||||||||||||||||||||||| |||||| |||| ||  ||||||||| |||||   |||||||||||||||||||| |||| ||||  ||||||    
T  23064840 tagaatcgatataggaaattgtaaaattgcaatcaaaatcgaatgattttaccaaaaaataataatactaaatatatgttataaatgatatagggtcata 23064939  T
Q  523 aatgac--ctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaa 612  Q
    ||||||   || |||||||||||||        ||||| |||||||||||||||   ||||||| | ||||||| |||||||| |||||||||| |||||    
T  23064940 aatgacttatagtttataagaaatcgtaaaattgcaattaaaatcgatggatttgacctattttagaattctacaatggatttgagtcgttgaatgtgaa 23065039  T
Q  613 gaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||| ||||||| ||||||||||| |||||||||||| |||| |||||||||    
T  23065040 gaaagttacaaaatactggattttagaatttaagtcggggttttaacaacaatg 23065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 323 - 663
Target Start/End: Complemental strand, 5376015 - 5375666
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||| ||||||||||| |||||| |||   ||||| |||||| | ||  ||| ||||||||||||||||||||||||||||||||| |||| ||    
T  5376015 ttgtcaaaattgggactttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttctg 5375916  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa-aaaatttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    ||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||| |||| ||||||||||||||||||||| |||| ||||| |||||    
T  5375915 tagaatctatataggaaattgtaaaatcacaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataaatgatatatggtcat 5375816  T
Q  522 aaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaag 613  Q
    ||||||| || ||||||||        |||||||||||||| |||||| ||||||||||||||   |||||| |||| |||| |||||||||||||||||    
T  5375815 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctattttaaaattctattatgaattttagtcgttgaaggtgaag 5375716  T
Q  614 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 663  Q
    |||||| ||||||| |  ||||||| ||||| || |||||||||||||||    
T  5375715 aaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 323 - 666
Target Start/End: Complemental strand, 36121173 - 36120823
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||| ||||||| || || |||||||||||||  |||| | ||  ||| ||||| ||||||||||||| ||||||||||||| |||||||    
T  36121173 ttgtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcggaatcaaaatcgaaagattttactcaaggacttttg 36121074  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||   ||||||||||||||| |||| |||||||||||||||||    
T  36121073 tagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttta-ccaaaaataataatactaaatatattttataaatggtatatagtcata 36120975  T
Q  523 aatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || | ||||||        ||||||||||||||||||||| ||||||  |||||| | ||| || ||||||||||||||||||||||||||||    
T  36120974 aatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtgaaga 36120875  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    || || |||||||||  ||||||  |||||| |||| |||||||||||||||    
T  36120874 aaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaacaatg 36120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 346 - 666
Target Start/End: Original strand, 5361767 - 5362093
Alignment:
Q  346 caggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgt 444  Q
    ||||||||||| ||| |||||||| |||  || ||| ||| |||| |||||||||||| ||||||||||  |||||||||||||||||||| ||||| ||    
T  5361767 caggtcgaaagagaagagcaaaat-agacaatcgtaaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaatcgt 5361865  T
Q  445 aaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaat 544  Q
    |||||||||||| || | ||||||||| ||| ||| ||   ||||||||||||||||||  ||||||||||| ||||||||||| || ||||||||||||    
T  5361866 aaaatcgcaatcaaagtcgatggatttgaccaaaagaaa--aatactaaatatatgttaaaaatggtatataatcataaatgacttagtttataagaaat 5361963  T
Q  545 cg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggatttt 636  Q
    ||        |||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||    
T  5361964 cgtaaaatctcaatcaaaatcgatgggttttgcctattttggaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaatttt 5362063  T
Q  637 aggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||||||||||||||||||||||    
T  5362064 aggatttaagtcgggattttgacaacaatg 5362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 382 - 666
Target Start/End: Complemental strand, 10143191 - 10142898
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta-cccaaaa 480  Q
    ||||||||||||||||||||||||||| ||||  | |||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |  ||||    
T  10143191 aatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaattgatggattttatcaaaaaa 10143092  T
Q  481 aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtcta 572  Q
    ||  ||||||||||||||| |||| | ||||||||||||||||||||| | |||||||||||||||        ||||||||||||||||||||||||||    
T  10143091 aaaataatactaaatatatattataattggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtcta 10142992  T
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||| ||| ||||||||| || |||| ||||||||| |||||||| ||||||  |  ||||||| ||||||||||||||||| |||||||||    
T  10142991 ttttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaacaatg 10142898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 323 - 670
Target Start/End: Complemental strand, 8889566 - 8889223
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||| ||| || ||||||||||| ||  ||||||||    |  |||| |||||||| |||||||||||||| ||||||||  |||||||    
T  8889566 ttgtcaaaatcgggattttgcttcaggtcgaaagagag-agcaaaattgacaattgtaaaatcgcaaccaaaatcgaaggatcttactcaactacttttg 8889468  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||         ||||||||||||||||||| |||| |||| |||||||| | ||||   |||||||||||||| |||| |||||||||||||||||    
T  8889467 tagaat---------aaattgtaaaatcgcaatcaaaatcgatgaattttaccaacaaaaa--aatactaaatatatattataaatggtatatagtcata 8889379  T
Q  523 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    || ||| |  ||||||||||||||        ||||||||||||||| |||||| |||||||||||||||| |||| |||| ||||||||| ||||||||    
T  8889378 aacgacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgggattctattatgaatttgagtcgttgatggtgaaga 8889279  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttg 670  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8889278 aattcacaaaatcctggattttaggatttaagtcgggattttgacatcaatggttg 8889223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 386 - 664
Target Start/End: Complemental strand, 17466366 - 17466080
Alignment:
Q  386 gcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaattt 485  Q
    |||| |||||| ||| |||| |||||||  |||||||| ||||||||||| ||||||||||||| |||||| |||| ||||||||||||   |||||  |    
T  17466366 gcaaacaaaattgaaagattatactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaatcgatggattttacaacaaaaaaat 17466267  T
Q  486 aatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttg 577  Q
    |||| |||||||||||||| ||||||||||||||||||||||| || ||||| ||        ||||||||||| ||||||||||||||||  ||||||     
T  17466266 aatattaaatatatgttataaatggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaatctaaatcgatggattttgcttatttta 17466167  T
Q  578 ggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||| ||||||||| |||| || ||| |||||||| || |||||||||  |||||| ||||||||| || |||||||||||||    
T  17466166 ggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 328 - 666
Target Start/End: Complemental strand, 13023903 - 13023566
Alignment:
Q  328 aaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaa 427  Q
    ||||| ||||||||||| || |||||||| ||||||||||||| ||||  ||| |||| ||||||| || ||| |||||||| |||| | ||||||| ||    
T  13023903 aaaattgggactttacttcaagtcgaaagagaatagcaaaatcggaactcgtaaaatcacaatcaagatagaatgattttacccaaggaattttgtaaaa 13023804  T
Q  428 tcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatga 527  Q
    ||||||||||||||| |||||||| || | |     |            |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  13023803 tcgatataggaaattttaaaatcgtaacctaccgaaa------------aaaaaaattaatactaaatatatgttataaatggtatatagtcataaatga 13023716  T
Q  528 cctaatttataagaaatcg--------caatcaaaatcgatggattttgtctatttt--gggattctactatggatttaagtcgttgaaggtgaagaaag 617  Q
    | || ||||||| ||||||        |||||||||||||| |||||| ||||||||  ||||||||||||||||||| |||| ||||||||||||||||    
T  13023715 cttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttgggattctactatggatttgagtcattgaaggtgaagaaag 13023616  T
Q  618 tcacaaaatcctgga-ttttaggatttaagtcgggattttgacaacaatg 666  Q
    || |||||||||  | ||||||||||||||| ||||||||||||||||||    
T  13023615 tcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaatg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 8011221 - 8011345
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    ||||||||||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  8011221 aaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagga 8011320  T
Q  641 tttaagtcgggattttgacaacaat 665  Q
    ||| ||| |||||||||||||||||    
T  8011321 tttgagttgggattttgacaacaat 8011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 323 - 528
Target Start/End: Original strand, 6346734 - 6346940
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    ||||||||||||| | ||| || ||||||||||||||| ||||||||| ||| || ||| |||| |||||||||||||||||||||||||||  ||||||    
T  6346734 ttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatc-gaaaatcgtaaaatcacaatcaaaatcgaaggattttactcaactactttt 6346832  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtca 520  Q
    |||||||  ||||| |||||||||||||||||||| |||| ||||||||| ||| ||| |||  ||||  |||||||||||||| ||| |||||||  ||    
T  6346833 gtagaatgaatataagaaattgtaaaatcgcaatcaaaatcgatggatttcaccaaaacaaaaataatgataaatatatgttataaattgtatatatgca 6346932  T
Q  521 taaatgac 528  Q
    ||||||||    
T  6346933 taaatgac 6346940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 354 - 527
Target Start/End: Original strand, 8010946 - 8011120
Alignment:
Q  354 aagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgca 453  Q
    ||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||||||  | |||| ||||||||||||| |||||||||||||||||    
T  8010946 aagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactatttttatagaatcgatataagaaattgtaaaatcgca 8011045  T
Q  454 atcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatga 527  Q
    ||| |||| |||| |||||||| ||| |||  |||| ||||||||||||||| ||| ||||||| | ||||||||    
T  8011046 atcaaaatcgatgtattttaccaaaacaaaaataatgctaaatatatgttataaattgtatataattataaatga 8011120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 541 - 666
Target Start/End: Original strand, 13551627 - 13551752
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    |||||||||| ||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||| |||||| |||||||||  |||||||||    
T  13551627 aaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttagga 13551726  T
Q  641 tttaagtcgggattttgacaacaatg 666  Q
    | ||||||| ||||||||||||||||    
T  13551727 tataagtcgagattttgacaacaatg 13551752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 382 - 666
Target Start/End: Complemental strand, 37240530 - 37240261
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatag-gaaattgtaaaatcgcaatcgaaattgatggattttacccaaaa 480  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||| |||||||| ||||| ||||                 |     
T  37240530 aatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatataaagaaatcgtaaaatcacaatcaaaat-----------------at 37240448  T
Q  481 aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtcta 572  Q
    |||  ||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||        ||||||||||||||| ||| || |||    
T  37240447 aat--aatactaaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattatgccta 37240350  T
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||| ||||||||||||||| |||||||||||||||| ||||||  ||    ||  |||||||||||||||| |||||||| |||||||||    
T  37240349 ttttggg-ttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggattttaacaacaatg 37240261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 561 - 669
Target Start/End: Complemental strand, 7044831 - 7044723
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    ||||||||  |||||||||||||| |||||||||| |||||||||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgaca 7044732  T
Q  661 acaatggtt 669  Q
    |||| ||||    
T  7044731 acaacggtt 7044723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 323 - 525
Target Start/End: Complemental strand, 24719918 - 24719722
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||| || ||| || ||||||||||||||| |||||||||  ||       ||||| ||||| |||||||||||||||||| |  |||||||    
T  24719918 ttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaatcgaaa-------aatcgaaatcacaatcgaaggattttactcgattacttttg 24719826  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa-aaaatttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    ||||||||||||| ||||| |||||||||||||| |||| ||||  ||||||| ||  |||  ||||  |||||||||||||| ||| ||||||||||||    
T  24719825 tagaatcgatataagaaatcgtaaaatcgcaatcaaaatcgatgagttttaccaaagcaaaaataatgttaaatatatgttataaattgtatatagtcat 24719726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 326 - 435
Target Start/End: Complemental strand, 55476335 - 55476226
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| || ||||||||||| ||  |||||| | ||  ||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  55476335 tcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 55476236  T
Q  426 aatcgatata 435  Q
    ||||||||||    
T  55476235 aatcgatata 55476226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 387 - 528
Target Start/End: Original strand, 9149565 - 9149708
Alignment:
Q  387 caatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgt-aaaatcgcaatcgaaattgatggattttacccaaa-aaatt 484  Q
    |||||||||| ||||||||||||||||  ||||| |||||||||||||| ||||| || |||| ||||||| |||||||| ||||||||| ||| |||      
T  9149565 caatcaaaattgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaattgatagattttaccaaaagaaaaa 9149664  T
Q  485 taatactaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    |||| ||||||||||||||| ||| ||||||||| |||||||||    
T  9149665 taatgctaaatatatgttataaattgtatatagttataaatgac 9149708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 335 - 469
Target Start/End: Original strand, 13551463 - 13551597
Alignment:
Q  335 ggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatat 434  Q
    |||||||||| | |||||||| |||||||||||||||  ||  ||| ||||||||| |||||||||||||||||||| || |||||| |||||||||| |    
T  13551463 ggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgattt 13551562  T
Q  435 aggaaattgtaaaatcgcaatcgaaattgatggat 469  Q
    || ||||| ||||||| ||||| |||||| |||||    
T  13551563 agaaaattttaaaatcacaatcaaaattgctggat 13551597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 561 - 666
Target Start/End: Original strand, 18459733 - 18459838
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    |||||||| ||||||| ||||||| |||||||||| |||||||||| ||||| | |||| ||||||| ||||||||||||||| |||||||||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  661 acaatg 666  Q
    ||||||    
T  18459833 acaatg 18459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 561 - 661
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    |||||||| |||||||||||||||||||||| ||| ||||| | ||| |||| ||||||||||||| ||| ||||||||||||||||||||||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  661 a 661  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 323 - 528
Target Start/End: Complemental strand, 7045294 - 7045086
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||| || | |||||| ||||||||||||||| |||||||||| ||    || ||||||||||||||||||||||||||||||||   |||||     
T  7045294 ttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttactcaactgcttttc 7045195  T
Q  423 tagaatc--gatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtc 519  Q
     ||||||  |||||| ||||| |||||||  ||||| ||||  |||||| ||||| ||| |||  ||||  |||||||||||||| | | |||||||||     
T  7045194 aagaatcgagatataagaaatcgtaaaatatcaatcaaaatctatggatcttaccaaaacaaaaataatgttaaatatatgttataatttgtatatagtg 7045095  T
Q  520 ataaatgac 528  Q
    |||||||||    
T  7045094 ataaatgac 7045086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 562 - 665
Target Start/End: Complemental strand, 4156866 - 4156763
Alignment:
Q  562 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 661  Q
    |||||||  |||||| |||||||||||  ||||| ||||||| |||||||| ||||||| ||||||||  |||||| |||||||||||||||||||||||    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T
Q  662 caat 665  Q
    ||||    
T  4156766 caat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 382 - 515
Target Start/End: Complemental strand, 10394901 - 10394768
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-a 480  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||| |||||||  ||||| |||| ||||||| ||||| ||| |    
T  10394901 aatcgcaatcaaaatcgaaggactttactcaactacttttgtagaatcggtataggaaatcgtaaaattacaatc-aaatcgatggatattaccaaaaca 10394803  T
Q  481 aatttaatactaaatatatgttatgaatggtatat 515  Q
    ||  ||||  |||||||||||||| ||| ||||||    
T  10394802 aaaataatggtaaatatatgttataaattgtatat 10394768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 572 - 666
Target Start/End: Complemental strand, 24719610 - 24719516
Alignment:
Q  572 attttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||| ||||||| |||||||||| |||||||||||||||| |||||| ||||||| || ||||||| | |||||||| ||||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaatg 24719516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 382 - 528
Target Start/End: Complemental strand, 7045054 - 7044907
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-a 480  Q
    ||||||||||||||||||| ||||||||||||  ||||||| | |||||||||| ||||| |||||||  ||||| |||| ||||||||||||| ||| |    
T  7045054 aatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttaccaaaaca 7044955  T
Q  481 aatttaatactaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    ||  ||||  |||| || |||||| | | ||||||||| |||||||||    
T  7044954 aaaataatgttaaacatgtgttataatttgtatatagtgataaatgac 7044907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 560 - 666
Target Start/End: Original strand, 6347088 - 6347194
Alignment:
Q  560 tggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgac 659  Q
    ||||||||  |||||||| || ||  |||||||||| ||||||||||||| || |||||  ||||||||||||||||||||||||||| || ||||||||    
T  6347088 tggattttacctattttgagactcggctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgac 6347187  T
Q  660 aacaatg 666  Q
    || ||||    
T  6347188 aataatg 6347194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 561 - 666
Target Start/End: Complemental strand, 7452523 - 7452419
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    |||||||| |||| || ||| || |||||||||| | ||||||||||||||| |||||  |||||| ||||||||||| ||||||||||||||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggattga-gtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  661 acaatg 666  Q
    ||||||    
T  7452424 acaatg 7452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 347 - 451
Target Start/End: Original strand, 5943062 - 5943166
Alignment:
Q  347 aggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaa 446  Q
    |||||||||||||| |||||||||| ||   ||| ||||||||  ||||| ||||||||||||||||  ||||||||||||||| | || ||||| ||||    
T  5943062 aggtcgaaagggaagagcaaaatcaaaaatcgtaaaatcgcaagtaaaattgaaggattttactcaactacttttgtagaatcggtttaagaaatcgtaa 5943161  T
Q  447 aatcg 451  Q
    |||||    
T  5943162 aatcg 5943166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 7452796 - 7452731
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaa 448  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||| ||||| ||||| ||||||    
T  7452796 aatcgcaatcaaaatcgaagga-tttactcaactacttttgtagaatcaatatacgaaatcgtaaaa 7452731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 4157377 - 4157269
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaa--cat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||| ||| ||  | |||||||||||| |||||||||  ||  ||| ||| |||||||||||| |||||| ||||||||||||  |||||||    
T  4157377 tcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttg 4157278  T
Q  423 tagaatcga 431  Q
    |||||||||    
T  4157277 tagaatcga 4157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 4157664 - 4157556
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaa--cat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||| ||| ||  | |||||||||||| |||||||||  ||  ||| ||| |||||||||||| |||||| ||||||||||||  |||||||    
T  4157664 tcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttg 4157565  T
Q  423 tagaatcga 431  Q
    |||||||||    
T  4157564 tagaatcga 4157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 8367489 - 8367437
Alignment:
Q  386 gcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 438  Q
    ||||||||||||||||||||||||||||| ||||| |||  ||||||||||||    
T  8367489 gcaatcaaaatcgaaggattttactcaaggactttggtaatatcgatatagga 8367437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 614 - 665
Target Start/End: Original strand, 9149813 - 9149864
Alignment:
Q  614 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||||| |||||||||  |||||||||||||||||||||||||||| |||||    
T  9149813 aaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 454
Target Start/End: Complemental strand, 8931510 - 8931441
Alignment:
Q  385 cgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaa 454  Q
    ||||| |||||||||||||||||||||||  |||||  || |||| ||||| |||||| |||||||||||    
T  8931510 cgcaaccaaaatcgaaggattttactcaactactttgataaaatcaatataagaaattataaaatcgcaa 8931441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 666
Target Start/End: Original strand, 5846458 - 5846509
Alignment:
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||| ||||||||||||||||  ||||||||||| |||||| |||||||||    
T  5846458 aagtcgcaaaatcctggattttgagatttaagtcgtgattttaacaacaatg 5846509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 561 - 623
Target Start/End: Complemental strand, 7803110 - 7803049
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaa 623  Q
    |||||||||||||||||||||||| |||||| ||| ||||| || || |||| ||||||||||    
T  7803110 ggattttgtctattttgggattctgctatgggtttgagtcgctg-agctgaataaagtcacaa 7803049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 561 - 623
Target Start/End: Complemental strand, 7825064 - 7825002
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaa 623  Q
    |||||||| ||||||||||||||| |||||| ||| |||||  |||| |||| ||||||||||    
T  7825064 ggattttgcctattttgggattctgctatgggtttgagtcgcggaagctgaataaagtcacaa 7825002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 8743604 - 8743658
Alignment:
Q  383 atcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagg 437  Q
    |||| ||||||||||||| ||||||||||||  || |||||| ||||||||||||    
T  8743604 atcgtaatcaaaatcgaaagattttactcaactacatttgtataatcgatatagg 8743658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 490 - 528
Target Start/End: Original strand, 18459563 - 18459601
Alignment:
Q  490 ctaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  18459563 ctaaatatatgttatgaactgtatatagtcataaatgac 18459601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 393 - 438
Target Start/End: Original strand, 5884129 - 5884174
Alignment:
Q  393 aaatcgaaggattttactcaagaacttttgtagaatcgatatagga 438  Q
    |||||||||||||||||||||  | |||||||||||| ||||||||    
T  5884129 aaatcgaaggattttactcaactatttttgtagaatcaatatagga 5884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 621 - 666
Target Start/End: Original strand, 8744087 - 8744132
Alignment:
Q  621 caaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||||| ||||| ||||||||||||| |||| ||||||||||    
T  8744087 caaaatcctgaatttttggatttaagtcggaatttcgacaacaatg 8744132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 326 - 672
Target Start/End: Complemental strand, 8788 - 8436
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| ||||  ||| ||||||||||||||| ||||||||||||||||| | ||| ||||    
T  8788 tcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagtattttcgtag 8689  T
Q  426 aatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaat 525  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||  |||||||||||||||| ||| ||||||||||||||||||||    
T  8688 aatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaa--taatactaaatatatggtataaatggtatatagtcataaat 8591  T
Q  526 gacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaag 617  Q
    ||| || ||||||||        ||||||||||||||||| ||||||||||  |||||||||||||||| || |||||||||||||||||||||||||||    
T  8590 gacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaaggtgaagaaag 8491  T
Q  618 tcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgta 672  Q
    || ||||||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  8490 tcgcaaaatcgtggattttaggatttaagtagggattttgacaacaatgattgta 8436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 203; Significance: 1e-110; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 323 - 666
Target Start/End: Complemental strand, 28746126 - 28745769
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||| ||||||||||| |||||||||||  |||||||||||| | ||  ||| |||||||||||||||||||| ||||||||||||||||||||    
T  28746126 ttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaacttttg 28746027  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||    
T  28746026 tagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatagtaaatatatgttataaatagtatatagtcata 28745927  T
Q  523 aatgacctaatttataa--------------gaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaagg 608  Q
    |||||| || |||||||               ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||||||||    
T  28745926 aatgacttagtttataattataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatgaatttgagtcgttgaagg 28745827  T
Q  609 tgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||||    
T  28745826 tgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaatg 28745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 323 - 667
Target Start/End: Complemental strand, 29067626 - 29067282
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||   || |||| |||||||| ||||||||||||||||||| | |||||    
T  29067626 ttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatcaaa-tcgaaggattttactcaaggatttttg 29067528  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaat--ttaatactaaatatatgttatgaatggtatatagtca 520  Q
    |||||| ||||| |||| |||||||||||||||| |||| ||||||||||||||||||||   |||| ||||||||||||         |||||||||||    
T  29067527 tagaattgatattggaagttgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaaattaacactaaatatatg---------gtatatagtca 29067437  T
Q  521 taaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaa 612  Q
    |||||||| || ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29067436 taaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcgttgaaggtgaa 29067337  T
Q  613 gaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatgg 667  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  29067336 gaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaatgg 29067282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 323 - 662
Target Start/End: Complemental strand, 39428257 - 39427905
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaat----cgaaggattttactcaagaact 418  Q
    ||||||||||||||||||||||   ||| ||||||||||||||||||| | ||   || |||||||||||||||    |||||||||||||||||  | |    
T  39428257 ttgtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcgcaatcaaaataaatcgaaggattttactcaaagatt 39428158  T
Q  419 tttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa-aaaatttaatactaaatatatgttatgaatggtatatag 517  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||||||||||||| | | ||||||||    
T  39428157 tttgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataagtagtatatag 39428058  T
Q  518 tcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 609  Q
    ||||||||||| || ||||||||        ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||    
T  39428057 tcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacgt 39427958  T
Q  610 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 662  Q
    |||||||||  |||||||| ||||||||  |||||| ||||||||||||||||    
T  39427957 gaagaaagttgcaaaatccaggattttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 323 - 666
Target Start/End: Original strand, 24619976 - 24620333
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||| |||||||| || ||| |||||||||||||||||  | || |||| ||||||||||||||||||||||||||||||||  |||||||    
T  24619976 ttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagacttttg 24620075  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaattt---aatactaaatatatgttatgaatggtatatagtc 519  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||  |   |||||||||||||| |||| ||||||||||| ||    
T  24620076 tagaatcgatatagaaaattgtaaaatcgcaatcaaaattgttggattttaccaaaaaaaaataaaaatactaaatatattttataaatggtatataatc 24620175  T
Q  520 ataaatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtga 611  Q
    ||||||||| || |||||||||||||        ||||| |||||||||| |||||| |||||||| ||||||||| || |||| |||||||||||||||    
T  24620176 ataaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgagattctactgtgaatttgagtcgttgaaggtga 24620275  T
Q  612 agaaa---gtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||   ||| ||||||| |  ||||||||||||||||||| |||||||||||||||    
T  24620276 agaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaatg 24620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 382 - 665
Target Start/End: Complemental strand, 20756313 - 20756039
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    ||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     
T  20756313 aatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaag 20756214  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctat 573  Q
    |  ||||||||||||||||||                 ||||||||| || |||||||||||||        ||||||||||||||| ||||||| ||||    
T  20756213 aaataatactaaatatatgtt-----------------ataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgattttgcctat 20756131  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||  ||||||||||||||||| |||| ||||||||||||||| || |||||||||| ||||||  ||||||||||||||||||||||||||    
T  20756130 tttaagattctactatggatttgagtcattgaaggtgaagaaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 382 - 667
Target Start/End: Original strand, 8155967 - 8156262
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    ||||||||  || |||||||||||||||||||  |||||||||| || |||||| |||| ||||||||||||||| | || | ||||||||||| ||||     
T  8155967 aatcgcaactaagatcgaaggattttactcaactacttttgtagcattgatataagaaactgtaaaatcgcaatcaatatcg-tggattttaccaaaaat 8156065  T
Q  482 att--taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtct 571  Q
    | |  |||||||||||||||||||| ||||||||||||| |||||| || || ||||||||||||||        |||||||||||||||||||||||||    
T  8156066 aataataatactaaatatatgttataaatggtatatagttataaataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtct 8156165  T
Q  572 a-ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatgg 667  Q
    | |||||||||| |||||||||||| |||| ||||||||||| ||| ||  ||||| ||| ||||||| |||||||| |||||||||||||||||||    
T  8156166 aattttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaacaatgg 8156262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 323 - 665
Target Start/End: Complemental strand, 22137627 - 22137278
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||| || |||  | ||||||||||| ||| ||||||||||| |   ||| |||| ||| ||||||| ||| |||||||||||  |||||||    
T  22137627 ttgtcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcagcaatagtaaaatcacaaccaaaatcaaagaattttactcaactacttttg 22137528  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt--taatactaaatatatgttatgaatggtatatagtca 520  Q
    ||||||||||||| ||||| |||||| |  |||| |||||||||||||||| | ||||||||  |||||||||||||| ||||| ||| |||||||||||    
T  22137527 tagaatcgatataagaaatcgtaaaaccaaaatcaaaattgatggatttta-caaaaaaattaataatactaaatata-gttataaatagtatatagtca 22137430  T
Q  521 taaatgacctaatttataag-------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaag 613  Q
    |||||||| || |  |||||       |||||||||| |||||||||||||||||  |||||||||||| |||||||||||| || |||| |||||||||    
T  22137429 taaatgacttagtaaataagaaatcgaaaatcgcaattaaaatcgatggattttgcatattttgggattttactatggatttgaggcgttcaaggtgaag 22137330  T
Q  614 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||||  || ||| || ||||||||||||||||| ||||||| | ||||||    
T  22137329 aaagtcgtaacatcttgaattttaggatttaagtcaggattttaaaaacaat 22137278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 382 - 660
Target Start/End: Complemental strand, 17064598 - 17064326
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||| |||||| |||| ||||||||||||| |||||    
T  17064598 aatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataagaaattgtaaaattgcaatcaaaatcgatggattttaccaaaaaa 17064499  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctat 573  Q
    |   |||||||||||              |||||||||||||||||| || ||||||||        |||||||||| |||||||||| |||||||||||    
T  17064498 aaaaaatactaaata--------------tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattttgtctat 17064413  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    ||| | ||||||||||| |||  |||||||||||||||| | | || |||||||||| |||||| ||||||||||||||||||||||    
T  17064412 tttagaattctactatgaattggagtcgttgaaggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 382 - 664
Target Start/End: Original strand, 3449148 - 3449419
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||| |||||||||| ||||||| ||||  |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| |||||    
T  3449148 aatcgcaaccaaaatcgaatgattttattcaactacttttgtagaatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttaccaaaaaa 3449247  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctat 573  Q
    | | ||||||||||||||||                 || ||||||| || ||||||||||||||        |||| |||||| |||||||||| ||||    
T  3449248 aat-aatactaaatatatgt-----------------cacaaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggattttgcctat 3449329  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    ||| |||||||||||| ||||| || |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  3449330 tttaggattctactatagattttag-cgttgaaggtaaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 346 - 656
Target Start/End: Complemental strand, 21963758 - 21963438
Alignment:
Q  346 caggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgt 444  Q
    ||||||||||| ||| ||||||||| ||  || ||| |||| ||| ||||||  ||| |||||||||||  |||||| ||||||||||||| ||||| ||    
T  21963758 caggtcgaaagagaagagcaaaatc-gacaatagtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgt 21963660  T
Q  445 aaaatcgcaatcgaaattgatggattttacccaaaaaatt--taatactaaatatatgttatgaatggtatata--gtcataaatgacctaatttataag 540  Q
    |||| |  |||| |||||||||||||||||  ||||||||  |||||||||||||| ||||| ||| |||||||  |||||||||||| || |  |||||    
T  21963659 aaaaccagaatcaaaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataag 21963561  T
Q  541 aaatcgcaa-------tcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggat 633  Q
    |||||| ||       |||||||||||||||||||  |||||| ||||| |||||||||||| ||||||| |||||||||||||||  |||||| || ||    
T  21963560 aaatcgaaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaat 21963461  T
Q  634 tttaggatttaagtcgggatttt 656  Q
    |||||||||||||||||||||||    
T  21963460 tttaggatttaagtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 346 - 656
Target Start/End: Complemental strand, 21986194 - 21985874
Alignment:
Q  346 caggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgt 444  Q
    ||||||||||| ||| ||||||||| ||  || ||| |||| ||| ||||||  ||| |||||||||||  |||||| ||||||||||||| ||||| ||    
T  21986194 caggtcgaaagagaagagcaaaatc-gacaatagtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgt 21986096  T
Q  445 aaaatcgcaatcgaaattgatggattttacccaaaaaatt--taatactaaatatatgttatgaatggtatata--gtcataaatgacctaatttataag 540  Q
    |||| |  |||| |||||||||||||||||  ||||||||  |||||||||||||| ||||| ||| |||||||  |||||||||||| || |  |||||    
T  21986095 aaaaccagaatcaaaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataag 21985997  T
Q  541 aaatcgcaa-------tcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggat 633  Q
    |||||| ||       |||||||||||||||||||  |||||| ||||| |||||||||||| ||||||| |||||||||||||||  |||||| || ||    
T  21985996 aaatcgaaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaat 21985897  T
Q  634 tttaggatttaagtcgggatttt 656  Q
    |||||||||||||||||||||||    
T  21985896 tttaggatttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 441 - 647
Target Start/End: Original strand, 22494679 - 22494892
Alignment:
Q  441 ttgtaaaatcgcaatcgaaattgatggattttacccaaaaaat------ttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatt 534  Q
    |||||||||||||||| |||| ||||||||||||||||||||       || |||||||||||||||||| |||||||||||||||||| |||| || ||    
T  22494679 ttgtaaaatcgcaatcaaaatagatggattttacccaaaaaaaaaaaacttgatactaaatatatgttataaatggtatatagtcataactgacttagtt 22494778  T
Q  535 tat-aagaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggat 633  Q
    |||    ||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||| |||||||||||||||| |||||| |||||||   |||    
T  22494779 tatcgtaaaatcgcaatcaaaatcgatgaattttgtttattttaggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagat 22494878  T
Q  634 tttaggatttaagt 647  Q
    ||||||||||||||    
T  22494879 tttaggatttaagt 22494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 377 - 592
Target Start/End: Complemental strand, 42697144 - 42696920
Alignment:
Q  377 tgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc- 475  Q
    |||| ||||||||  ||||| ||||||||||| ||||  |||||||||||||||||||| |||||  |||| |||||||| |||| |||||||||||||     
T  42697144 tgtaaaatcgcaactaaaattgaaggattttattcaactacttttgtagaatcgatataagaaatcataaactcgcaatcaaaatcgatggattttacca 42697045  T
Q  476 caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggatttt 567  Q
     ||||||   ||||| ||||||||||||| ||||||||||||||||||||||| || ||||||||        ||||||||||||||||||||| |||||    
T  42697044 aaaaaaaaaaaataccaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 42696945  T
Q  568 gtctattttgggattctactatgga 592  Q
    | |||||||| ||||||||||||||    
T  42696944 gcctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 326 - 667
Target Start/End: Original strand, 22355848 - 22356184
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    |||||||||| |||||||  |||||||||| |||||||||||||| | ||  ||| |||||||||||||||| || ||||||| ||||| |||||||||     
T  22355848 tcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaagattttattcaaggacttttgtaa 22355947  T
Q  426 aatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaat 525  Q
    ||||||||    ||||||||||| ||||| | |||| ||||||||||||| |||||   ||||| |||||||||||||| |||||          |||||    
T  22355948 aatcgata----aaattgtaaaaccgcaaacaaaatcgatggattttaccaaaaaataataataataaatatatgttataaatgg----------taaat 22356033  T
Q  526 gacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg-aagaaa 616  Q
    ||| || ||||||||        ||||||||||||||||  ||||||||||  |||||| ||||||||||||| ||| || | ||||||| || || |||    
T  22356034 gacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaaaaaaa 22356133  T
Q  617 gtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatgg 667  Q
     ||  ||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  22356134 atcttaaaatcctgaattttaggatttaagtcggaattttgataacaatgg 22356184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 30727696 - 30727820
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||| | |||||||| ||    
T  30727696 aaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaaga 30727795  T
Q  641 tttaagtcgggattttgacaacaat 665  Q
    |||||||| ||||||||| ||||||    
T  30727796 tttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 382 - 516
Target Start/End: Original strand, 25870160 - 25870294
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||| ||||||| |||||||||||||||  |  ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||    
T  25870160 aatcgcaaccaaaatcaaaggattttactcaactaagtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaa 25870259  T
Q  482 atttaatactaaatatatgttatgaatggtatata 516  Q
       |||||||||||||||||||| |||||||||||    
T  25870260 caataatactaaatatatgttataaatggtatata 25870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 24649693 - 24649818
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttg-tctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagg 639  Q
    ||||| || ||||||| |||| |||||| | |||||||| |||||||||||||||| ||||||||||||||||| |||||| |||||||| ||||||| |    
T  24649693 aaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatcctagattttacg 24649792  T
Q  640 atttaagtcgggattttgacaacaat 665  Q
    ||||||||||||||||||||||||||    
T  24649793 atttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 8592178 - 8592293
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||| |||||||||||||||| || ||||||||| ||||||||||||   ||  ||| ||||||||||||||||||||||||||||||||| |||||||    
T  8592178 ttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 8592277  T
Q  423 tagaatcgatatagga 438  Q
    ||||||||||||||||    
T  8592278 tagaatcgatatagga 8592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 392 - 546
Target Start/End: Original strand, 15515106 - 15515258
Alignment:
Q  392 aaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatact 491  Q
    |||||||||| |||||||||||  |||||| |||||||  || | |||||||||||||   |||  ||||  |||||||||||| |||||||  ||||||    
T  15515106 aaaatcgaagtattttactcaactacttttatagaatcattagaagaaattgtaaaattataataaaaatccatggattttaccaaaaaaat--aatact 15515203  T
Q  492 aaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 546  Q
    ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  15515204 aaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcg 15515258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 323 - 528
Target Start/End: Complemental strand, 27676786 - 27676580
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgt-acaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    |||| |||||| ||| ||| || || |||||||||||| ||||||||| ||| || | | ||||||||||||||||||| ||||||||||||  ||||||    
T  27676786 ttgttaaaatcaggattttgcttcaagtcgaaagggaagagcaaaatc-gaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactactttt 27676688  T
Q  422 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtca 520  Q
    ||| |||||||||| ||||| |||||||| ||||| ||||  |||||||||||| ||| |||   |||  |||||||||||||| |||  ||||||||||    
T  27676687 gtaaaatcgatataagaaatcgtaaaatcacaatcaaaatcaatggattttaccaaaacaaaaacaatgttaaatatatgttataaattatatatagtca 27676588  T
Q  521 taaatgac 528  Q
    ||||||||    
T  27676587 taaatgac 27676580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 346 - 503
Target Start/End: Complemental strand, 13286271 - 13286113
Alignment:
Q  346 caggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgta 445  Q
    ||||||| ||||||| || ||||||| |||  ||| |||||||||||||||| || ||||||||||||  |||||||||||||||||||| ||||| |||    
T  13286271 caggtcggaagggaagagaaaaatcaaaactcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgtagaatcgatataagaaatcgta 13286172  T
Q  446 aaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgtta 503  Q
    ||||| ||||  |||| ||||||||||||| ||| |||  ||||||||| |||||||||    
T  13286171 aaatcacaatgaaaatcgatggattttaccaaaacaaaaataatactaactatatgtta 13286113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 553 - 666
Target Start/End: Original strand, 25870389 - 25870506
Alignment:
Q  553 aaatcgatggattttgtctattttgggattctactatggatttaagtcgtt----gaaggtgaagaaagtcacaaaatcctggattttaggatttaagtc 648  Q
    |||||||||||||||| |||||||| | |||||||| | |||| |||||||    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  25870389 aaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagatgaagaaagtcacaaaatcttggattttaggatttaagtc 25870488  T
Q  649 gggattttgacaacaatg 666  Q
    | ||||||||||||||||    
T  25870489 gagattttgacaacaatg 25870506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 354 - 519
Target Start/End: Original strand, 6136379 - 6136543
Alignment:
Q  354 aagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgca 453  Q
    ||||||| |||||||||| ||   ||| |||||||||||||||| || ||||||||||||  |||||| ||||||||||||| ||||| |||||||| ||    
T  6136379 aagggaaaagcaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttatagaatcgatataagaaatcgtaaaatcaca 6136478  T
Q  454 atcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtc 519  Q
    ||| |||| ||||||||||||| ||| |||  ||||||||| |||||||||  ||| ||||||||||    
T  6136479 atcaaaatcgatggattttaccaaaacaaaaataatactaactatatgtta--aattgtatatagtc 6136543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 561 - 666
Target Start/End: Original strand, 15806531 - 15806635
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    |||||||| || |||||||||||| |||||||||| |||| ||||||||||| |||||| |||||| ||||||| ||||||||||||| |||||||||||    
T  15806531 ggattttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtc-ggattttgaca 15806629  T
Q  661 acaatg 666  Q
    ||||||    
T  15806630 acaatg 15806635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 561 - 666
Target Start/End: Complemental strand, 27676460 - 27676355
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    |||||||  ||||||||||||||| |||||||||| |||| | ||||||||| |||||| |||||||||| |||||| |||||||||| |||||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  661 acaatg 666  Q
    ||||||    
T  27676360 acaatg 27676355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 326 - 438
Target Start/End: Complemental strand, 3041570 - 3041458
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    |||||||||||| |||||| || ||||||| ||| |||||||||| | ||  ||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 3041471  T
Q  426 aatcgatatagga 438  Q
    || |||| |||||    
T  3041470 aaacgatgtagga 3041458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 323 - 475
Target Start/End: Original strand, 10872494 - 10872646
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| ||| |||||| |||||| |||||||| || ||||||| ||    || ||||||||||||||| ||||||||||||| ||  |||||||    
T  10872494 ttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttactaaactacttttg 10872593  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 475  Q
     |||||||||||| ||||| ||||||||  |||  ||||||||||||||||||    
T  10872594 aagaatcgatataagaaatcgtaaaatcagaataaaaattgatggattttacc 10872646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 561 - 655
Target Start/End: Original strand, 10872971 - 10873065
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattt 655  Q
    |||||||| |||||||| |||||| |||||||||| |||||||||||||||| ||  |||||||||||||||||||||||||| | |||||||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggatttcaatcgggattt 10873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 565 - 666
Target Start/End: Complemental strand, 17796368 - 17796267
Alignment:
Q  565 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||||||| ||||||| ||||| |||| ||| |||||||||||| |||||||||||||||| ||||||| ||||||||| || |||||||||| ||    
T  17796368 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataa 17796269  T
Q  665 tg 666  Q
    ||    
T  17796268 tg 17796267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 565 - 666
Target Start/End: Complemental strand, 19104808 - 19104707
Alignment:
Q  565 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||||||| ||||||| ||||| |||| ||| |||||||||||| |||||||||||||||| ||||||| ||||||||| || |||||||||| ||    
T  19104808 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataa 19104709  T
Q  665 tg 666  Q
    ||    
T  19104708 tg 19104707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 565 - 666
Target Start/End: Complemental strand, 17796477 - 17796376
Alignment:
Q  565 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||||||| ||||||| ||||| |||| ||| ||||||| |||| ||||||  |||||||| ||||||| |||||||||||| |||||||||||||    
T  17796477 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 17796378  T
Q  665 tg 666  Q
    ||    
T  17796377 tg 17796376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 565 - 666
Target Start/End: Complemental strand, 17796586 - 17796485
Alignment:
Q  565 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||  |||||||| ||||||| ||||||| |||  |||||||||||||    
T  17796586 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 17796487  T
Q  665 tg 666  Q
    ||    
T  17796486 tg 17796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 565 - 666
Target Start/End: Complemental strand, 19104917 - 19104816
Alignment:
Q  565 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||||||| ||||||| ||||| |||| ||| ||||||| |||| ||||||  |||||||| ||||||| |||||||||||| |||||||||||||    
T  19104917 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 19104818  T
Q  665 tg 666  Q
    ||    
T  19104817 tg 19104816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 565 - 666
Target Start/End: Complemental strand, 19105026 - 19104925
Alignment:
Q  565 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||  |||||||| ||||||| ||||||| |||  |||||||||||||    
T  19105026 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 19104927  T
Q  665 tg 666  Q
    ||    
T  19104926 tg 19104925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 326 - 438
Target Start/End: Original strand, 8560239 - 8560351
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||   ||  ||  |||||||||||||||||||||||||||||||||   ||||||||    
T  8560239 tcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttactcaaggttttttgtag 8560338  T
Q  426 aatcgatatagga 438  Q
    |||| ||||||||    
T  8560339 aatcaatatagga 8560351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 323 - 436
Target Start/End: Original strand, 20766680 - 20766793
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| ||  ||||||| || ||||||||||   ||  ||| |||||||||||||||||||  ||||||||||||  ||||||    
T  20766680 ttgtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaaaattttactcaagggcttttg 20766779  T
Q  423 tagaatcgatatag 436  Q
     |||||||||||||    
T  20766780 gagaatcgatatag 20766793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 326 - 438
Target Start/End: Complemental strand, 18014338 - 18014226
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| || ||  ||| ||| |||||||||  | ||  ||| ||||||||||||||||||||||||||||||||| |||||| ||     
T  18014338 tcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttataa 18014239  T
Q  426 aatcgatatagga 438  Q
    || ||||||||||    
T  18014238 aaccgatatagga 18014226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 326 - 438
Target Start/End: Complemental strand, 22971155 - 22971044
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||| ||||||||||| || ||  ||||| | |||||||||| | ||  ||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  22971155 tcaaaattgggactttacttcaagttaaaagg-agtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 22971057  T
Q  426 aatcgatatagga 438  Q
    ||| ||| |||||    
T  22971056 aattgatgtagga 22971044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 323 - 426
Target Start/End: Complemental strand, 41671529 - 41671426
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||| ||| || ||||||||||| ||| |||||||||   |  |||| |||||||| |||||||||||||||||||||||  |||||||    
T  41671529 ttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttg 41671430  T
Q  423 taga 426  Q
    ||||    
T  41671429 taga 41671426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 346 - 469
Target Start/End: Complemental strand, 17796892 - 17796771
Alignment:
Q  346 caggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgta 445  Q
    ||||||||||||||| || ||||| | ||   ||| ||| ||||| |||||||||| |||||||||||  |||||||||||||||  ||| ||||| |||    
T  17796892 caggtcgaaagggaaaagaaaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgta 17796795  T
Q  446 aaatcgcaatcgaaattgatggat 469  Q
    |||||| |||| ||||||||||||    
T  17796794 aaatcgaaatcaaaattgatggat 17796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 346 - 469
Target Start/End: Complemental strand, 19105332 - 19105211
Alignment:
Q  346 caggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgta 445  Q
    ||||||||||||||| || ||||| | ||   ||| ||| ||||| |||||||||| |||||||||||  |||||||||||||||  ||| ||||| |||    
T  19105332 caggtcgaaagggaaaagaaaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgta 19105235  T
Q  446 aaatcgcaatcgaaattgatggat 469  Q
    |||||| |||| ||||||||||||    
T  19105234 aaatcgaaatcaaaattgatggat 19105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 27090792 - 27090677
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||| |||||| || ||||||  ||||||||||||||||| |||||   ||   |||  |||||||| ||||||||||||||||||||||| | |||||    
T  27090792 ttgtcgaaatcgagattttactttaggtcgaaagggaatagaaaaattgcaaatcgtaagatcgcaataaaaatcgaaggattttactcaaggaattttg 27090693  T
Q  423 tagaatcgatatagga 438  Q
    || |||||||||||||    
T  27090692 tataatcgatatagga 27090677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 382 - 449
Target Start/End: Complemental strand, 28136053 - 28135986
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaat 449  Q
    |||||| |||||||||||||||||||||||||  ||||||||| ||| |||||| |||||||||||||    
T  28136053 aatcgctatcaaaatcgaaggattttactcaactacttttgtaaaattgatataagaaattgtaaaat 28135986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 382 - 545
Target Start/End: Original strand, 9152823 - 9152984
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaa- 480  Q
    ||||| || |||||||||| ||||| ||||||  | ||||||||||||||| || |||||||||||||| ||||| |||| ||| ||||||||| ||||     
T  9152823 aatcgtaaccaaaatcgaaagatttgactcaactatttttgtagaatcgat-tatgaaattgtaaaatcacaatcaaaatcgatagattttaccaaaaac 9152921  T
Q  481 aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatc 545  Q
    |   ||||| |||  ||||| |||  ||| ||||||||||||||| || || |||||||||||||    
T  9152922 acaataatattaa--atatgctatacatgatatatagtcataaataacttagtttataagaaatc 9152984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 21553672 - 21553786
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaagg-attttactcaagaactttt 421  Q
    |||| ||||||||||||||||| ||  |||||||||| ||| |||||| | ||  ||  |||||||||||||||||||||  ||||| ||||| ||||||    
T  21553672 ttgtaaaaatcgggactttacttcaaatcgaaagggagtagaaaaatcgggactggt--aatcgcaatcaaaatcgaaggttttttattcaaggactttt 21553769  T
Q  422 gtagaatcgatatagga 438  Q
    ||||||| |||||||||    
T  21553770 gtagaattgatatagga 21553786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 326 - 438
Target Start/End: Complemental strand, 19348900 - 19348788
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||| | ||||||||| || ||| ||||||| ||||||||||   ||  ||| ||||||||||||||| ||||||||||| | ||| |||||| ||     
T  19348900 tcaaaattgagactttacttcaagtcaaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatggaaggattttattgaaggacttttataa 19348801  T
Q  426 aatcgatatagga 438  Q
    |||||||||||||    
T  19348800 aatcgatatagga 19348788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 369
Target Start/End: Original strand, 24649528 - 24649574
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaat 369  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  24649528 ttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaat 24649574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 586 - 664
Target Start/End: Complemental strand, 28135801 - 28135723
Alignment:
Q  586 ctatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||||||||| ||||  |||| ||||| |||||| |||||||||| |||||| ||||||| |||| |||||||||||||    
T  28135801 ctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 25296557 - 25296659
Alignment:
Q  166 atagcaccaccttccttgttttgtgggcaggcaaagaggtaattggttaactgctattcgcaatctgatcgggacaatttccatctaaataaataacagt 265  Q
    |||||||||||||| ||||| ||||| ||| || | |||| ||||||||| || ||||| || | |||||| ||||||||||||||| ||||||| || |    
T  25296557 atagcaccaccttc-ttgttgtgtggccagacagaaaggtgattggttaattgttattcacagtatgatcgagacaatttccatctagataaatagcact 25296655  T
Q  266 gctc 269  Q
    ||||    
T  25296656 gctc 25296659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 409
Target Start/End: Complemental strand, 13006176 - 13006089
Alignment:
Q  321 gattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttac 409  Q
    ||||||||||||||||| ||| ||  |||||||||||||||||||||||  ||| || ||| ||||||||||||||| ||| ||||||||    
T  13006176 gattgtcaaaatcggga-tttgctttaggtcgaaagggaatagcaaaat-tgaaaatcgtaaaatcgcaatcaaaattgaatgattttac 13006089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 438
Target Start/End: Complemental strand, 27055445 - 27055328
Alignment:
Q  321 gattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttt 420  Q
    ||||||||||||||| | |||||| |||||  ||||| ||||| ||||||  ||   ||| ||||||||| ||||| ||| | ||||||| || ||| ||    
T  27055445 gattgtcaaaatcggaattttacttcaggtaaaaaggaaatagtaaaatcgcaaatcgtaaaatcgcaattaaaattgaaaggttttactaaaaaacatt 27055346  T
Q  421 tgtagaatcgatatagga 438  Q
    ||||||||||||| ||||    
T  27055345 tgtagaatcgatacagga 27055328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 661
Target Start/End: Complemental strand, 42696910 - 42696870
Alignment:
Q  621 caaaatcctggattttaggatttaagtcgggattttgacaa 661  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  42696910 caaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 4e-96; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 321 - 671
Target Start/End: Original strand, 31237753 - 31238112
Alignment:
Q  321 gattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttt 420  Q
    ||||||||||||| |||||||||| ||| || ||||||||||| |||||| | ||  ||| |||||||||||| |||||||||||||||||||| |||||    
T  31237753 gattgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggacttt 31237852  T
Q  421 tgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatac-taaatatatgttatgaatggtatatagtc 519  Q
    |||| ||||||||||| |||||||||||| |||||| |||| ||||||||||||| |||||   |||||| | |||||||||||| ||||||||||| ||    
T  31237853 tgtaaaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggattttaccaaaaaataataatacatgaatatatgttataaatggtatataatc 31237952  T
Q  520 ataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtga 611  Q
    ||||||||| || ||||||||        |||||||||||||||||||||||||||  |||||||  |||||||||||| |||| |||||||||||||||    
T  31237953 ataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaaggtga 31238052  T
Q  612 agaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgt 671  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  31238053 agaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaacaatgattgt 31238112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 323 - 666
Target Start/End: Complemental strand, 1405133 - 1404782
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||| ||||||| |  ||||| |||||||||||||||||| | ||   || |||||||||||||||||||||||||||||||||||||||||    
T  1405133 ttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 1405034  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||| |   || ||   || | |||| |||||||||| |||||| ||||||||||    
T  1405033 tagaatcgatataggaaattgtaaaattgcaatcaaaatcgatggatttaaaaaaataataatattcctaagtatatgttataaatggtgtatagtcata 1404934  T
Q  523 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || | ||||||||||||        ||||||||||||||||||||||  || ||| ||||||||| |||||||||||||||||||||||||||    
T  1404933 aatgacttagtatataagaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaaga 1404834  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  1404833 aagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaatg 1404782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 323 - 666
Target Start/End: Complemental strand, 20064073 - 20063713
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||   ||  ||| |||||||||||||||||||| |||||||||||| |||||||    
T  20064073 ttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttg 20063974  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt--------taat-actaaatatatgttatgaatggtat 513  Q
    |||||||||||||||||||||||||||||||| | |||| ||||||||||||| |||||| |        |||| | |||||| |||| || ||||||||    
T  20063973 tagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttaccaaaaaaaataaaataaataataaataaatacatgtgataaatggtat 20063874  T
Q  514 atagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttga 605  Q
    | ||||||||||||  || || |||||        |||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  20063873 acagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttga 20063774  T
Q  606 aggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    || ||||||||  | ||||| | ||||||||||| ||||||||||||||||||||||||||    
T  20063773 agatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 20063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 382 - 666
Target Start/End: Complemental strand, 36430139 - 36429847
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||||||| |  |||   |||||| |||||| |||| ||||||||||||| |||||    
T  36430139 aatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcgatggattttacctaaaaa 36430040  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctat 573  Q
    |   ||||||||||||||||||  |||| ||||||||||||||| || || ||||||||||||||        |||||||||||||||||||||| ||||    
T  36430039 aaaaaatactaaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctat 36429940  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||| |||||| ||||| | || ||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||||    
T  36429939 tttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggattttgacaacaatg 36429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 377 - 664
Target Start/End: Original strand, 35565787 - 35566082
Alignment:
Q  377 tgtacaatcgcaatcaaaatcgaaggatttta---ctcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta 473  Q
    |||| ||||||||  |||||||||||||||||   |||||  |||||||||||||||||||| |||||  ||||||| ||||| |||| |||||||||||    
T  35565787 tgtaaaatcgcaactaaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaatcataaaatcacaatcaaaatcgatggatttta 35565886  T
Q  474 cccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatc--------gcaatcaaaatcgatggatt 565  Q
    || ||||||   ||||||||||||||||||| ||| ||||||||||||||||||| |  |||||||||||||        ||||||||||||||||||||    
T  35565887 ccaaaaaaa---aatactaaatatatgttataaattgtatatagtcataaatgactttgtttataagaaatcgtaaaactgcaatcaaaatcgatggatt 35565983  T
Q  566 ttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    ||| ||||||||||||||||| |||||||| |||| |||||  ||||||||||| |||||||||| |||||  ||||||||| ||||||||||||||||    
T  35565984 ttgcctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 382 - 666
Target Start/End: Original strand, 15588693 - 15588979
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||| |||||||||||||||||||||||  ||||  |||| ||||||||| |||||| ||||||||||||| |||| ||||||||||||| |||||    
T  15588693 aatcgcaaccaaaatcgaaggattttactcaattacttc-gtaggatcgatataagaaattataaaatcgcaatcaaaatcgatggattttaccaaaaaa 15588791  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctat 573  Q
    |  ||||||||||||||||  || ||||||||||| ||||||||||| || |||||| |        |||||||||| |||| |||| ||||||||||||    
T  15588792 a--taatactaaatatatg--ataaatggtatataatcataaatgacttagtttatatgaaatcgtaaaatcgcaataaaaaacgattgattttgtctat 15588887  T
Q  574 tttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||| |||||||||||| |||| ||| ||||||||||||||||| | |||||||||| |||||| || ||||||||||||||||||| |||||    
T  15588888 tttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcgggattttgacagcaatg 15588979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 323 - 504
Target Start/End: Complemental strand, 30433165 - 30432984
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||| ||||| |||||||||| | ||||| |||||| | ||   || ||||||||||||||||||| ||||||||||||| ||||||     
T  30433165 ttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttactcaaggactttta 30433066  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttat 504  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||    
T  30433065 tagaatcgatataggaaattgtaaaatcgcaatcaaaatagatggattttaccccaaaaaattaatactaaatatatgttat 30432984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 438 - 663
Target Start/End: Complemental strand, 31578238 - 31578007
Alignment:
Q  438 aaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttat 537  Q
    ||||||||||||||||||   ||| ||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  31578238 aaattgtaaaatcgcaattataatcgatggattttaaccaaaaaaat-aatactaaatatatgttataaatggtatatagtcataaatgacttagtttat 31578140  T
Q  538 aagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcct 629  Q
    || ||||||        |||||||||| |||||||||||  |||||| ||||||||||| |||||||| |||||||||||||||||| || ||||||| |    
T  31578139 aataaatcgtaaaattgcaatcaaaattgatggattttgcttattttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatctt 31578041  T
Q  630 ggattttaggatttaagtcgggattttgacaaca 663  Q
      ||||||  ||||||||||||||||||||||||    
T  31578040 aaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 323 - 513
Target Start/End: Original strand, 19262095 - 19262285
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||| ||||||| |||||||| || |||||| ||||||||||||||| | ||  ||| ||||||||||||||||||| ||||||||||||| |||||||    
T  19262095 ttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttg 19262194  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtat 513  Q
    ||||||||||||| |||||||||||||||||||| |||| || ||| |||||| |||||   ||||||||| |||||||||| ||||||||    
T  19262195 tagaatcgatataagaaattgtaaaatcgcaatcaaaatcgacggactttaccaaaaaataataatactaactatatgttataaatggtat 19262285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 499 - 666
Target Start/End: Complemental strand, 30432593 - 30432418
Alignment:
Q  499 tgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatg 590  Q
    |||||| ||||||||||||| ||||||||| || ||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||    
T  30432593 tgttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatg 30432494  T
Q  591 gatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||| |||||||||||| ||||||||||  |||||||| |||||||| |||||| || |||||||||||||||||    
T  30432493 gatttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaatg 30432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 541 - 666
Target Start/End: Original strand, 23863326 - 23863451
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||| |||||| || |||||||| |    
T  23863326 aaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattttagaa 23863425  T
Q  641 tttaagtcgggattttgacaacaatg 666  Q
    ||||||||||||||||||||||||||    
T  23863426 tttaagtcgggattttgacaacaatg 23863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 323 - 528
Target Start/End: Original strand, 25538924 - 25539130
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||| |||||||  |||||||||||||||||| |||||| |  |  ||| |||||||||||||||  |||||||||||| ||  |||||||    
T  25538924 ttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttactgaactacttttg 25539023  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    |||||||||||||  |||||||||||| |||||| |||| ||| ||||||||| ||| | |  |||| |||||||||||||||  || ||||||||||||    
T  25539024 tagaatcgatataaaaaattgtaaaattgcaatcaaaatcgatagattttaccaaaacagaaataatgctaaatatatgttatatattgtatatagtcat 25539123  T
Q  522 aaatgac 528  Q
    |||||||    
T  25539124 aaatgac 25539130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 541 - 663
Target Start/End: Original strand, 25539231 - 25539353
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    |||||||| |||||||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||||||||| |  |||| || || |||||||||    
T  25539231 aaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttgaattttagga 25539330  T
Q  641 tttaagtcgggattttgacaaca 663  Q
    ||||| |||||||||| ||||||    
T  25539331 tttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 326 - 438
Target Start/End: Complemental strand, 974686 - 974573
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 424  Q
    |||| |||||||||||||| || ||||||||||| |||||||||| |||  | ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  974686 tcaatatcgggactttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgta 974587  T
Q  425 gaatcgatatagga 438  Q
    ||||||||||||||    
T  974586 gaatcgatatagga 974573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 329 - 438
Target Start/End: Original strand, 27523881 - 27523990
Alignment:
Q  329 aaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaat 428  Q
    |||||||||||||||| || ||||||||||| |||||||||| | ||  ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 27523980  T
Q  429 cgatatagga 438  Q
    |||| |||||    
T  27523981 cgatgtagga 27523990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 19491980 - 19491855
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattt--tag 638  Q
    |||||||||||||||||||||||||||  ||||||||| ||||| |||||||||| ||||||| ||| ||||||||||| ||||||||| |||||  |||    
T  19491980 aaatcgcaatcaaaatcgatggattttacctattttgg-attctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttatag 19491882  T
Q  639 gatttaagtcgggattttgacaacaat 665  Q
    ||||||| ||| |||||||||||||||    
T  19491881 gatttaattcgagattttgacaacaat 19491855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 1690564 - 1690730
Alignment:
Q  380 acaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa 479  Q
    |||||||||| ||||| ||||||| |||||| ||  ||||||||  |||||||||| ||| | |||||||||||||| |||| |||  |||||||| |||    
T  1690564 acaatcgcaaccaaaagcgaaggaatttactgaactacttttgttaaatcgatataagaattcgtaaaatcgcaatcaaaatcgataaattttaccaaaa 1690663  T
Q  480 aaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 546  Q
    ||   ||||| ||||||||| |||| ||||||||||||||||||| ||| || ||||||||||||||    
T  1690664 aataataatattaaatatattttataaatggtatatagtcataaaagacttagtttataagaaatcg 1690730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 559 - 667
Target Start/End: Original strand, 1690785 - 1690893
Alignment:
Q  559 atggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttga 658  Q
    |||| ||||| ||||||||||||| |||||||||| | |||||| ||||||||||||||||||||||||||  |||||| ||||||||||||  ||||||    
T  1690785 atgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttga 1690884  T
Q  659 caacaatgg 667  Q
    |||||||||    
T  1690885 caacaatgg 1690893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 323 - 525
Target Start/End: Complemental strand, 8428572 - 8428369
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||| ||| ||  ||||||||||||||||| ||||||| ||  | || |||||||||||||||||||||||||| |||||  | |||||    
T  8428572 ttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggattttgctcaactatttttg 8428473  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    ||||||| ||||   |||| |||||||||||||  |||| |||| ||| |||| ||| |||  |||| |||| ||||| |||| |||  |||||||||||    
T  8428472 tagaatcaatatcaaaaatcgtaaaatcgcaatacaaatcgatgaattataccaaaacaaaaataatgctaactatatattataaattatatatagtcat 8428373  T
Q  522 aaat 525  Q
    ||||    
T  8428372 aaat 8428369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 326 - 432
Target Start/End: Original strand, 20034004 - 20034110
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||   ||  ||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  20034004 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtag 20034103  T
Q  426 aatcgat 432  Q
    |||||||    
T  20034104 aatcgat 20034110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 382 - 528
Target Start/End: Complemental strand, 16767076 - 16766930
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-a 480  Q
    ||||||||||||||| ||||||||||||||||  |||||| ||||||||||||| ||||| |||||||||||||| ||||  | ||| |||||| ||| |    
T  16767076 aatcgcaatcaaaattgaaggattttactcaactacttttatagaatcgatataagaaatcgtaaaatcgcaatcaaaatcaaagga-tttaccaaaaca 16766978  T
Q  481 aatttaatactaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    ||  |||| |||||||| |||||| ||| ||||| |||||||||||||    
T  16766977 aaaataatgctaaatatttgttataaattgtatacagtcataaatgac 16766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 19245939 - 19245824
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||| ||| || || || |||||||||||||||||||| ||   ||| |||||||||||||||| |||||||||||| ||  |||||||    
T  19245939 ttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactacttttg 19245840  T
Q  423 tagaatcgatatagga 438  Q
    ||||||||||||||||    
T  19245839 tagaatcgatatagga 19245824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 325 - 435
Target Start/End: Original strand, 21869102 - 21869212
Alignment:
Q  325 gtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 424  Q
    |||||||||||||||||||| || ||||||||||||||| |||||| | ||   || ||||||||| ||||||||||||||||| ||||  |||||||||    
T  21869102 gtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggattttattcaatgacttttgta 21869201  T
Q  425 gaatcgatata 435  Q
    |||||||||||    
T  21869202 gaatcgatata 21869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 326 - 432
Target Start/End: Complemental strand, 7302129 - 7302023
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| || || ||| |||  |||||||||| | ||  ||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  7302129 tcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgtag 7302030  T
Q  426 aatcgat 432  Q
    |||||||    
T  7302029 aatcgat 7302023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 383 - 528
Target Start/End: Complemental strand, 27407081 - 27406935
Alignment:
Q  383 atcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aa 481  Q
    ||||||||||||||| ||| |||||||||||  ||||||| | |||| ||||| |||||  ||||||||||||| |||||||||||||| ||| ||| ||    
T  27407081 atcgcaatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatcaaaattgatggatttcaccaaaacaa 27406982  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    |  |||| |||||||||| |||| ||  ||||||||| |||||||||    
T  27406981 aaataatgctaaatatatattataaactgtatatagtaataaatgac 27406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 382 - 509
Target Start/End: Original strand, 13502511 - 13502639
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-a 480  Q
    ||||| ||||||||| ||||||| ||| ||||  | |||||||||||| ||||| ||||| |||||||||||||| |||| ||||||||||||| ||| |    
T  13502511 aatcgtaatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaaca 13502610  T
Q  481 aatttaatactaaatatatgttatgaatg 509  Q
    ||  ||||| |||||||||||||| ||||    
T  13502611 aaaataatattaaatatatgttataaatg 13502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 563 - 666
Target Start/End: Complemental strand, 17995157 - 17995054
Alignment:
Q  563 attttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 662  Q
    |||||| ||||||||| ||| | ||| | |||| ||||||||| |||||| ||| || |||||| |||||||||||| |||||||||| ||||| |||||    
T  17995157 attttgcctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaac 17995058  T
Q  663 aatg 666  Q
    ||||    
T  17995057 aatg 17995054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 668
Target Start/End: Original strand, 5395674 - 5395780
Alignment:
Q  562 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 661  Q
    ||||||| |||||||| |||||| |||||||||| |||| || ||| |||| |||||| |||||||||  |||||| |||||| |||   ||||||||||    
T  5395674 gattttgcctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaa 5395773  T
Q  662 caatggt 668  Q
    |||||||    
T  5395774 caatggt 5395780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 560 - 666
Target Start/End: Complemental strand, 15266187 - 15266081
Alignment:
Q  560 tggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgac 659  Q
    ||||||||  ||||||||| ||| ||  |||||||| | || |||||| |||| ||||| ||||||||||| |||||||||||||| ||  |||||||||    
T  15266187 tggatttttcctattttggaattataacatggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgac 15266088  T
Q  660 aacaatg 666  Q
    |||||||    
T  15266087 aacaatg 15266081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 352 - 438
Target Start/End: Complemental strand, 34578210 - 34578124
Alignment:
Q  352 gaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 438  Q
    |||||||| |||||||||| | ||   || ||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||    
T  34578210 gaaagggagtagcaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcatggacttttgtagaatcgatgtagga 34578124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 34841816 - 34841728
Alignment:
Q  438 aaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaat 525  Q
    |||| |||||||||||||| |||| |||||||| || ||||| |||  ||||| |||||||||||||| ||| ||||||||||||||||    
T  34841816 aaatcgtaaaatcgcaatcaaaatcgatggattctatccaaacaaaaataataataaatatatgttataaattgtatatagtcataaat 34841728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 665
Target Start/End: Complemental strand, 16766804 - 16766710
Alignment:
Q  571 tattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||||| ||||||| |||||||||| | |||||||||||||| ||| ||  ||||||||  |||||| ||||||||||   ||||||||||||||    
T  16766804 tattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 19492168 - 19492079
Alignment:
Q  438 aaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt--taatactaaatatatgttatgaatggtatatagtcataaat 525  Q
    |||| |||||| || |||| |||| ||||||||||||| |||||| |  |||| ||||||||||||||| ||| ||||||||||||||||    
T  19492168 aaatcgtaaaaccgtaatcaaaatcgatggattttaccaaaaaaaataataatgctaaatatatgttataaattgtatatagtcataaat 19492079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 629
Target Start/End: Complemental strand, 31023325 - 31023259
Alignment:
Q  563 attttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcct 629  Q
    |||||| ||||||| ||||||||||||| |||| |||||||||| ||||| |||||| |||||||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcct 31023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 666
Target Start/End: Complemental strand, 15627715 - 15627654
Alignment:
Q  605 aaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||| |||  ||||||||| |  |||||||||||||||||||||||||||||| ||||    
T  15627715 aaggtgaataaaaccacaaaatcataaattttaggatttaagtcgggattttgacaataatg 15627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 665
Target Start/End: Complemental strand, 29660938 - 29660893
Alignment:
Q  620 acaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||    
T  29660938 acaaaatcctagattttaggatttaagtcggatttttgacaacaat 29660893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 405 - 536
Target Start/End: Original strand, 5395384 - 5395515
Alignment:
Q  405 tttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgtta 503  Q
    |||||||||  |||||| ||||||||||||| |||||  ||||||  ||||| |||| ||  ||||||||| ||| |||  ||||  | || ||||||||    
T  5395384 tttactcaattactttt-tagaatcgatataagaaatcttaaaattacaatcaaaatcgaaagattttaccaaaacaaaaataatgttcaaaatatgtta 5395482  T
Q  504 tgaatggtatatagtcataaatgacctaattta 536  Q
    | ||| |||||||||||||||||||| ||||||    
T  5395483 taaattgtatatagtcataaatgacccaattta 5395515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 622 - 666
Target Start/End: Complemental strand, 19245196 - 19245152
Alignment:
Q  622 aaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||    
T  19245196 aaaatcctgaattttaaaatttaagtcgggattttgacaacaatg 19245152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 586 - 665
Target Start/End: Original strand, 19257568 - 19257647
Alignment:
Q  586 ctatggatttaagtcgttgaaggtgaag-aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||| |||| ||||||||||| | ||| ||||||| |||||| |||||||||||| |||||||| |||||||| ||||||    
T  19257568 ctatgaatttgagtcgttgaag-tcaagtaaagtcataaaatcttggattttaggacttaagtcgcgattttgataacaat 19257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 578 - 666
Target Start/End: Original strand, 27750194 - 27750282
Alignment:
Q  578 ggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||  ||||||||| ||||||| ||| | |  |||||| ||||||| || ||||| ||| |||||||| ||||||||||||||||    
T  27750194 ggattctgttatggatttgagtcgtttaagttaagaaaagtcgcaaaatcttgtattttgggacttaagtcgcgattttgacaacaatg 27750282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 573 - 629
Target Start/End: Complemental strand, 34841648 - 34841592
Alignment:
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcct 629  Q
    |||||| ||||| |||||||||| |||||||||||||||| |||||| || ||||||    
T  34841648 ttttggtattctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcct 34841592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 31023531 - 31023450
Alignment:
Q  444 taaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaa 524  Q
    |||||||| |||| |||| ||||||||||||| ||| |||  ||||  |||||||||||||| ||| ||| |||||||||||    
T  31023531 taaaatcgtaatcaaaatcgatggattttaccaaaataaaaataatgttaaatatatgttataaatagtaaatagtcataaa 31023450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 2e-95; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 321 - 671
Target Start/End: Complemental strand, 4247708 - 4247350
Alignment:
Q  321 gattgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttt 420  Q
    |||||||||||| ||||||||||| || ||||||||||||||  |||||  | |   ||| ||||||||||||| || |||||||||||||||| | |||    
T  4247708 gattgtcaaaattgggactttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcaaaggattttactcaaggatttt 4247609  T
Q  421 tgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtca 520  Q
    ||||||||||||||| |||||  ||||||||||||| |||| ||||||||||||| ||||||  |||||||||||||||||||  |||| ||||||||||    
T  4247608 tgtagaatcgatataagaaatcataaaatcgcaatcaaaatcgatggattttacctaaaaaaaataatactaaatatatgttacaaatgatatatagtca 4247509  T
Q  521 taaatgacctaatttataaga--------aatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaa 612  Q
    |||||||| || |||||||||        |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||    
T  4247508 taaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaagtgaa 4247409  T
Q  613 gaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgt 671  Q
    |||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||    
T  4247408 gaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaattgttgt 4247350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 323 - 664
Target Start/End: Complemental strand, 5058878 - 5058530
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||| |||   ||| ||| ||||||||||||||||||||||| ||||| | |||||    
T  5058878 ttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaattttg 5058779  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    | |||||||||||  ||||||||||||||||||| |||| |||||| |||||| |||||   |||||||||||||||||||| |||||||||||||||||    
T  5058778 t-gaatcgatataaaaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcata 5058680  T
Q  523 aatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || ||||||||||        ||||||||||||||||  |||||||| |||||||  |||||||||||||||||| |||||||||||||||||    
T  5058679 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaaga 5058580  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    || || |||||| ||| |||||||||||||||||||||||||||||||||    
T  5058579 aaatcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 346 - 666
Target Start/End: Original strand, 24725274 - 24725607
Alignment:
Q  346 caggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgta 445  Q
    ||||| |||||| |||||||| ||  |||| | || |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  24725274 caggttgaaaggaaatagcaatattggaacttttaaaatcgcaatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattgta 24725373  T
Q  446 aaatcgcaatcgaaattgatggattttacccaaaa-----aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag 540  Q
    ||||||||||| |||| ||||||||||||||||||     ||  |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  24725374 aaatcgcaatcaaaatcgatggattttacccaaaaaaaataaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataag 24725473  T
Q  541 --------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctgga 632  Q
            |||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||||||||  |||||| ||||    
T  24725474 aaatcgtcaaatcgtaatcaaaattgatggattttgcctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttgga 24725573  T
Q  633 ttttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||||||||||| |||||||||||||||||    
T  24725574 ttttaggatttaagtctggattttgacaacaatg 24725607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 323 - 627
Target Start/End: Complemental strand, 17811698 - 17811385
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| | |   ||| ||||||||||||||||||| ||||||||||||| |||||||    
T  17811698 ttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttg 17811599  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaat-ttaatactaaatatatgttatgaatggtatatagtcat 521  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||| | ||    
T  17811598 tagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaatattaatattaaatatattttataaatggtatataattat 17811499  T
Q  522 aaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaag 613  Q
    ||||||| || ||||||||        |||||||||||||||||||| |||||||||||||||   |||||||||||||||| ||||||||||||||||     
T  17811498 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaa 17811399  T
Q  614 aaagtcacaaaatc 627  Q
    ||||||||||||||    
T  17811398 aaagtcacaaaatc 17811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 323 - 665
Target Start/End: Original strand, 44944624 - 44944978
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||  | | ||  ||| ||||||||| |||||||||  |||||||| ||| |||||||    
T  44944624 ttgtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatcgaacaattttacttaaggacttttg 44944723  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| || |||||| |||||   |||||||||||||||||||| |||||||||||||||||    
T  44944724 tagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatagactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcata 44944823  T
Q  523 aatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaag----gtg 610  Q
    |||||| || ||||||||        ||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||||||    |||    
T  44944824 aatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggattttgactattttaggattctactatggatttgaatcgttgaaggtgagtg 44944923  T
Q  611 aagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  44944924 aagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 323 - 665
Target Start/End: Complemental strand, 5715631 - 5715290
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||||||||||    ||||||||| ||||| |||||| | ||  ||| |||||||||||||||||| |||||||||||||| |||||||    
T  5715631 ttgtcaaaatcgggactttact----gtcgaaaggaaatagaaaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttactcaaggacttttg 5715536  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||    || | | |||||||||||| ||||||||||| |||||    
T  5715535 tagaatcgatataggaaattataaaatcgcaatcaaaatcgatgaattttaccaaaaaa----aaaaatgaatatatgttataaatggtatataatcata 5715440  T
Q  523 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || ||||||||||||||        ||||||||||||||| ||||||  |||||||| ||||||||||| |||||||| |||||||||| | |    
T  5715439 aatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtgta-a 5715341  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  5715340 aagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 323 - 659
Target Start/End: Original strand, 20570664 - 20571002
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||||| |||| ||||| ||||||||||| ||||||    ||   || ||||||||||||||| ||| ||||||||||||| |||||||    
T  20570664 ttgtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcgcaatcaaaattgaaagattttactcaaggacttttg 20570763  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 522  Q
    ||||||||||||| |||||| ||||||| ||||| |||| |||||| |||||| |||||   |||||||||||||||||||| |||||||||||||||||    
T  20570764 tagaatcgatataagaaattataaaatcacaatcaaaatcgatggactttaccaaaaaagaataatactaaatatatgttataaatggtatatagtcata 20570863  T
Q  523 aatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 614  Q
    |||||| || |||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||| |||||| ||      || ||||||    
T  20570864 aatgacttattttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttttagattctactatagatttaggt------agatgaaga 20570957  T
Q  615 aagtcacaaaatcctggattttaggatttaagtcgggattttgac 659  Q
    ||||||||||||| ||||||| || ||||||||||||| ||||||    
T  20570958 aagtcacaaaatcttggatttcagaatttaagtcgggagtttgac 20571002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 321 - 666
Target Start/End: Complemental strand, 27221767 - 27221417
Alignment:
Q  321 gattgtcaaaatcgggactttactcc-aggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaactt 419  Q
    |||| |||||||||||||||||||   |||||||||| | ||||||||||| | |   ||| ||||||||||||||||||||||||||||||    ||||    
T  27221767 gattttcaaaatcgggactttacttttaggtcgaaagagtatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcggagactt 27221668  T
Q  420 ttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtc 519  Q
    ||||||||||||| ||||||||||||||||||||||  |||| ||  |||| |||| ||||||    | |||| ||||||||||| ||||||||||||||    
T  27221667 ttgtagaatcgatgtaggaaattgtaaaatcgcaattaaaatcgactgattgtaccaaaaaaa----aaactatatatatgttataaatggtatatagtc 27221572  T
Q  520 ataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtga 611  Q
    ||||||||| || ||||||||||||||        |||||||||||||||||||||| | |||||  |||||||||||| |||| ||||||||||| |||    
T  27221571 ataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaagattctactatgtatttgagtcgttgaagatga 27221472  T
Q  612 agaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    |||||||| |||||||||| ||||||| |||||||| |||||||| |||||||||    
T  27221471 agaaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaatg 27221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 382 - 666
Target Start/End: Complemental strand, 14055548 - 14055250
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca---- 477  Q
    |||||||| |||||||||||||||||||||||  |||||||||||| ||||||| ||||||| |||||||||||| ||||  |||||||||||| |        
T  14055548 aatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaacaaa 14055449  T
Q  478 --aaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggatttt 567  Q
      |||||  ||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||        ||||||||||||||| |||||||||    
T  14055448 aaaaaaagataatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggatttt 14055349  T
Q  568 gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    | ||||||| | |||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| |||||||||    
T  14055348 gcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 382 - 666
Target Start/End: Complemental strand, 14365576 - 14365278
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca---- 477  Q
    |||||||| |||||||||||||||||||||||  |||||||||||| ||||||| ||||||| |||||||||||| ||||  |||||||||||| |        
T  14365576 aatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaacaaa 14365477  T
Q  478 --aaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggatttt 567  Q
      |||||  ||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||        ||||||||||||||| |||||||||    
T  14365476 aaaaaaagataatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggatttt 14365377  T
Q  568 gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    | ||||||| | |||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| |||||||||    
T  14365376 gcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14365278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 382 - 666
Target Start/End: Original strand, 8329882 - 8330175
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||||||||||| |||||||||||||||  ||||||||||||| |||||| ||||| ||||||| |||||| ||||  |||||||||||| |||||    
T  8329882 aatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggattttaccaaaaaa 8329981  T
Q  482 atttaatactaaatatatgttat-gaatggtatatagtcataaatgacctaatttataa--------gaaatcgcaatcaaaatcgatggattttgtcta 572  Q
    | | |||| ||| ||||||||||  ||||||||||||||||||||||| || |||||||         |||||||||| |||||| ||| |||||  |||    
T  8329982 aataaataataagtatatgttataaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaatttttccta 8330081  T
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| || ||||||| ||||| ||| |||||||||||||||||    
T  8330082 ttttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaacaatg 8330175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 383 - 663
Target Start/End: Original strand, 8346370 - 8346660
Alignment:
Q  383 atcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaa 482  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||| |||||| |||||  ||||||| |||||  |||  |||||||||||| ||||||    
T  8346370 atcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggattttaccaaaaaaa 8346469  T
Q  483 tt-taatactaaatatatgttatgaa-tggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtcta 572  Q
    |  |||||||||||||||||||| || || ||||||| |||| ||||| || ||||||||||||||        |||| ||||||||||||||||  |||    
T  8346470 taataatactaaatatatgttataaaatgatatatagacatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggatttttccta 8346569  T
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 663  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||  ||||| ||| ||||||||||||||    
T  8346570 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 382 - 665
Target Start/End: Original strand, 21846285 - 21846554
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||| |||||||||||||||||| ||||  |||||| ||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||| |    
T  21846285 aatcgcaaccaaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaattgatggattttacccaaata 21846384  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaatcaaaatcgatggattttgtctattttgggat 581  Q
    |  ||||| |||||||||||||| |||| |||||||||||||||||| |            |||||||||||||||||| ||||||  || |||| | ||    
T  21846385 a-ataatattaaatatatgttataaatgatatatagtcataaatgactt------------atcgcaatcaaaatcgattgattttacctgttttagaat 21846471  T
Q  582 tctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    |||||||||||| | |||||||||| ||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  21846472 tctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 386 - 669
Target Start/End: Original strand, 8343644 - 8343933
Alignment:
Q  386 gcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaattt 485  Q
    |||||||||||||||| |||||||||||  ||||||||||||| ||||||  |||| |||||||||||||| || |  ||||||||||   |||||   |    
T  8343644 gcaatcaaaatcgaagtattttactcaactacttttgtagaattgatataaaaaatcgtaaaatcgcaatcaaagtcaatggatttta---aaaaataat 8343740  T
Q  486 aatactaaatatatgttatgaa-tggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctatttt 576  Q
    |||||||||||||  |||| || ||||||||| ||||| ||||| || ||||||||||||||        |||| ||||| ||||||||||   ||||||    
T  8343741 aatactaaatataacttataaaatggtatataatcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggatttttcatatttt 8343840  T
Q  577 gggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 669  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| | |  |||||||||||||||||||    
T  8343841 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggatttaggccaagattttgacaacaatggtt 8343933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 485 - 665
Target Start/End: Original strand, 24990012 - 24990200
Alignment:
Q  485 taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctatttt 576  Q
    |||||||||||||||||||| ||| ||||||||||||||||||  || ||||||||||||||        |||||||||||||||||||||| |||||||    
T  24990012 taatactaaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctatttt 24990111  T
Q  577 gggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
     |||||||||||||||||| |||||||| |||| |||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||    
T  24990112 aggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaat 24990200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 490 - 669
Target Start/End: Original strand, 26281256 - 26281442
Alignment:
Q  490 ctaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgc--aatc-----aaaatcgatggattttgtctattttgggatt 582  Q
    ||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||   ||||     |||||||||||||||||  |||||||| |||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgttaaatcgcaacaaaatcgatggattttgcttattttggaatt 26281355  T
Q  583 ctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 669  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  26281356 ctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaatggtt 26281442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 382 - 666
Target Start/End: Original strand, 7730197 - 7730472
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca-aaa 480  Q
    |||||||| |||||||||| | ||||||||||  ||||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||| | |||    
T  7730197 aatcgcaaccaaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcgcaatcaaaattgatggattttaccaacaaa 7730296  T
Q  481 aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaatcaaaatcgatggattttgtctattttggga 580  Q
    ||   ||||||||||||||||||| ||||  || ||||  || | ||    | |  |||  |||| |||||||||||||||||||||  ||||||||| |    
T  7730297 aaaaaaatactaaatatatgttataaatg--atttagtt-tataaga----aatcgtaa--aatctcaatcaaaatcgatggatttttcctattttggaa 7730387  T
Q  581 ttctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||| ||||||| ||| ||| ||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  7730388 ttctactgtggatttgagttgttaaaggtgaagaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaatg 7730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 533 - 658
Target Start/End: Complemental strand, 8571375 - 8571250
Alignment:
Q  533 tttataagaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctgga 632  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  8571375 tttataagaaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctgga 8571276  T
Q  633 ttttaggatttaagtcgggattttga 658  Q
    ||||| ||||||||||||||||||||    
T  8571275 ttttatgatttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 323 - 481
Target Start/End: Original strand, 24989553 - 24989710
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||| | ||  ||| ||| ||||||||||||||||||||||||| ||| |||||||    
T  24989553 ttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggacttttg 24989651  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  24989652 tagaatcgatataggaaattataaaatcgcaatcaaaatcgatggattttaccaaaaaa 24989710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 541 - 666
Target Start/End: Complemental strand, 39182383 - 39182259
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||    
T  39182383 aaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaatcctagattttagga 39182285  T
Q  641 tttaagtcgggattttgacaacaatg 666  Q
    |||||||| |||||||| ||||||||    
T  39182284 tttaagtcaggattttgtcaacaatg 39182259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 22687669 - 22687793
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |||||||| ||| ||||||| ||||||||||| |||| ||||| |||||||||    
T  22687669 aaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcgcaaattcctgaattttagga 22687768  T
Q  641 tttaagtcgggattttgacaacaat 665  Q
    |||||||||||||||||||||||||    
T  22687769 tttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 11326510 - 11326386
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    |||||||||||||||||||| ||||||| |||||||  ||||||||||||||||| ||||| ||||||||||||||||| |||||||||  |||||||||    
T  11326510 aaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaatcctaaattttagga 11326411  T
Q  641 tttaagtcgggattttgacaacaat 665  Q
    ||||||| |||||||||||||||||    
T  11326410 tttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 541 - 666
Target Start/End: Original strand, 9685249 - 9685374
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    |||||||||| ||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||| |||||| |||||||||  |||||||||    
T  9685249 aaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttagga 9685348  T
Q  641 tttaagtcgggattttgacaacaatg 666  Q
    | ||||||| ||||||||||||||||    
T  9685349 tataagtcgagattttgacaacaatg 9685374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 382 - 672
Target Start/End: Original strand, 26617315 - 26617612
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    ||||||||  ||| || ||||||||| |||||  | ||||||||||  ||||||  ||||||||||||||||||| |||| ||| ||||||||  |||||    
T  26617315 aatcgcaactaaattcaaaggattttgctcaattatttttgtagaaaggatataaaaaattgtaaaatcgcaatcaaaatcgattgattttacaaaaaaa 26617414  T
Q  482 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataaga--------aatcgcaatcaaaatcgatggattttgtctat 573  Q
    | | ||||||||||||||||||| ||||    ||||||||||||||| || | || ||||        ||||||||||||||||||| ||||||| ||||    
T  26617415 aat-aatactaaatatatgttataaatg----atagtcataaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattttgcctat 26617509  T
Q  574 --tttgggattctactat--ggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 669  Q
      ||| | ||||||||||  | ||||| ||||||||||||||| |||||| |||||||||| ||||||||||| ||||| | ||||| | ||||||||||    
T  26617510 attttagaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaattttcaaaacaatggtt 26617609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 382 - 656
Target Start/End: Complemental strand, 11325269 - 11324988
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    |||||||| |||| |  |||| ||||||||||  |||| |||| ||| ||||||| ||||||||||||  ||||| |||| ||||||||||||| |||||    
T  11325269 aatcgcaaccaaatttcaagggttttactcaactacttctgtaaaattgatatag-aaattgtaaaattacaatcaaaatcgatggattttaccaaaaaa 11325171  T
Q  482 atttaatactaaatatatgttatgaat----ggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgt 569  Q
    |   || |||||||||  ||||| |||    |||||||||||||||||||| || ||||||||||||||        ||||||||||  ||| ||||||     
T  11325170 aaaaaa-actaaatat--gttataaataattggtatatagtcataaatgacttagtttataagaaatcgtaaattcgcaatcaaaatt-atgaattttgc 11325075  T
Q  570 ctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggatttt 656  Q
    ||||||| | |||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||||||||||    
T  11325074 ctattttagaattctattatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 382 - 528
Target Start/End: Original strand, 26565386 - 26565532
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-a 480  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||| |||||  |||| ||||||| |||||| |||||||||||||||||| ||| |    
T  26565386 aatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggattttaccaaaaca 26565485  T
Q  481 aatttaatactaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    ||  ||||  | |||||||||||| ||  |||||||||||||||||||    
T  26565486 aaaataat-gttaatatatgttataaactgtatatagtcataaatgac 26565532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 335 - 469
Target Start/End: Original strand, 9685085 - 9685219
Alignment:
Q  335 ggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatat 434  Q
    |||||||||| | |||||||| |||||||||||||||  ||  ||| ||||||||| |||||||||||||||||||| || |||||| |||||||||| |    
T  9685085 ggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgattt 9685184  T
Q  435 aggaaattgtaaaatcgcaatcgaaattgatggat 469  Q
    || ||||| ||||||| ||||| |||||| |||||    
T  9685185 agaaaattttaaaatcacaatcaaaattgctggat 9685219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 382 - 472
Target Start/End: Complemental strand, 39182447 - 39182357
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttt 472  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| | |||| ||||||||||    
T  39182447 aatcgcaaccaaaatcgaaggattttactcaactacttttgtagaatcgatataagaaattgtaaaatcgcaaccaaaatcgatggatttt 39182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 323 - 472
Target Start/End: Complemental strand, 11326633 - 11326484
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    ||||||||||| | |||||| | ||||| ||||| ||||||||||||  | ||   || |||| |||||||||| |||| |||||||||||| |||||||    
T  11326633 ttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttactcaaggacttttg 11326534  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttt 472  Q
    | ||||| |||||||||||||||||||||||||| |||| ||| ||||||    
T  11326533 tggaatcaatataggaaattgtaaaatcgcaatcaaaatcgatagatttt 11326484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 326 - 438
Target Start/End: Original strand, 25842513 - 25842625
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||| ||||||||||| || ||||||||||| |||||||||| | ||  ||| ||||||||||||||| | ||||||||||||| ||||||||||||    
T  25842513 tcaaaattgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaattggaggattttactcatgaacttttgtag 25842612  T
Q  426 aatcgatatagga 438  Q
    ||||||| |||||    
T  25842613 aatcgatgtagga 25842625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 27509260 - 27509379
Alignment:
Q  392 aaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatact 491  Q
    ||||| ||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||  || | ||| ||||||| ||||||||  |||||||    
T  27509260 aaaattgaaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaataaaattcgattgatttta-ccaaaaaaaataatact 27509358  T
Q  492 aaatatatgttatgaatggta 512  Q
    ||||||||||||| |||||||    
T  27509359 aaatatatgttataaatggta 27509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 383 - 546
Target Start/End: Complemental strand, 6917068 - 6916907
Alignment:
Q  383 atcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaa 482  Q
    |||||||||||||| ||||||||||||||||  |||||  || |||||||||| |||||| |||||| |||||| |||| |||| |||||||| | ||||    
T  6917068 atcgcaatcaaaattgaaggattttactcaactactttcata-aatcgatataagaaattataaaattgcaatcaaaatcgatgaattttaccaacaaaa 6916970  T
Q  483 tttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 546  Q
        ||| |||||||||||||| | ||| ||| ||||||||||||| |||||||||||||||||    
T  6916969 aaatatattaaatatatgttataactggaata-agtcataaatgacttaatttataagaaatcg 6916907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 8304436 - 8304321
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||| ||||||||| || |||||||| || ||||||||||   ||  ||| |||| |||||||||||||||||||||||||||| |||||||    
T  8304436 ttgtcaaaatcgagactttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttactcaaggacttttg 8304337  T
Q  423 tagaatcgatatagga 438  Q
    |||||| |||||||||    
T  8304336 tagaattgatatagga 8304321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 562 - 665
Target Start/End: Complemental strand, 30294275 - 30294175
Alignment:
Q  562 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 661  Q
    ||||||| |||||||| |||| | |||||||||| |||||   |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  30294275 gattttgcctattttgagattttgctatggatttgagtcg---aaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaa 30294179  T
Q  662 caat 665  Q
    ||||    
T  30294178 caat 30294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 326 - 438
Target Start/End: Original strand, 1981107 - 1981217
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||||||||||| || ||||||||||| ||| |||||  ||||  ||| ||||| ||||||||||||||||  |||||||||  |||| ||||    
T  1981107 tcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgtaatcaaaatcgaagga--ttactcaaggtctttagtag 1981204  T
Q  426 aatcgatatagga 438  Q
    |||||||||||||    
T  1981205 aatcgatatagga 1981217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 346 - 514
Target Start/End: Complemental strand, 30294572 - 30294404
Alignment:
Q  346 caggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgta 445  Q
    |||||||| |||||| |||||||||| ||   ||| |||| |||||||||||||||||||||||| ||  |||||| ||||||||||| | |||||  ||    
T  30294572 caggtcgagagggaagagcaaaatcaaaaatcgta-aatcacaatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatccta 30294474  T
Q  446 aaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtata 514  Q
    ||||| ||||| || | ||||||||||||| ||| |||  ||||  |||||||||||||| ||| |||||    
T  30294473 aaatcacaatcaaactcgatggattttaccaaaacaaagataatgttaaatatatgttataaattgtata 30294404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 8329821 - 8329909
Alignment:
Q  386 gcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttac 474  Q
    ||||||||||| ||||||||||||||||  ||||||||||||| |||||| ||||| |||||||||||||| ||||  | |||||||||    
T  8329821 gcaatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaatcgcaatcaaaatcaaaggattttac 8329909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 382 - 482
Target Start/End: Complemental strand, 8572428 - 8572329
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 481  Q
    ||||||||||||||||||| ||| ||| ||||| || |||||||||| |||||| |||||| |||||| |||||| ||||  ||||||||||||||||||    
T  8572428 aatcgcaatcaaaatcgaaagatgttaatcaaggacatttgtagaattgatata-gaaattataaaattgcaatcaaaatcaatggattttacccaaaaa 8572330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 4575080 - 4574965
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||| | || ||| || ||||| |||||||||||| ||||||| ||   ||| |||||||||||||||| ||| ||| |||||||  |||||||    
T  4575080 ttgtcaaaattgagatttttcttcaggttgaaagggaatagtaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaagaattctactcaactacttttg 4574981  T
Q  423 tagaatcgatatagga 438  Q
    ||||||||||||||||    
T  4574980 tagaatcgatatagga 4574965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 541 - 610
Target Start/End: Complemental strand, 1977776 - 1977707
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg 610  Q
    ||||||||||||||||||| | ||||||  |||||| |||||||||||||||||| ||||||||||||||    
T  1977776 aaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtg 1977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 382 - 461
Target Start/End: Complemental strand, 1977839 - 1977761
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaat 461  Q
    ||||||||||||||||||||||||||||||||  | |||| ||||||||||||| |||||  ||||||||||||| ||||    
T  1977839 aatcgcaatcaaaatcgaaggattttactcaatta-ttttttagaatcgatataagaaatcctaaaatcgcaatcaaaat 1977761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 579 - 666
Target Start/End: Original strand, 8630001 - 8630088
Alignment:
Q  579 gattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||||||||| ||||||||||| | |  |||||  ||||||||| |||||| ||| |||||||| ||||||||||||||||    
T  8630001 gattctactatggatttgagtcgttgaagttaagtaaagttgcaaaatcctagattttgggacttaagtcgcgattttgacaacaatg 8630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 23618267 - 23618317
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgat 432  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  23618267 aatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcgat 23618317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 8346308 - 8346396
Alignment:
Q  386 gcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttac 474  Q
    |||| |||||||||||||||||||||||  |||||| |||||| |||||| ||||| |||| ||||||||| ||||  | |||||||||    
T  8346308 gcaaacaaaatcgaaggattttactcaactacttttatagaattgatataagaaatcgtaatatcgcaatcaaaatcaaaggattttac 8346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 541 - 645
Target Start/End: Original strand, 27509948 - 27510052
Alignment:
Q  541 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 640  Q
    |||||||||||||||| |||| |||||| |||||||   |||||||||| ||||| | |||||| | ||||||||| || |||||||||  ||||||| |    
T  27509948 aaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttggatgtgaagaaaatcgcaaaatcctttattttagaa 27510047  T
Q  641 tttaa 645  Q
    |||||    
T  27510048 tttaa 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 669
Target Start/End: Original strand, 26565663 - 26565761
Alignment:
Q  571 tattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 669  Q
    ||||||| |||||| ||||| |||| | ||||| || ||||| ||||| ||||||| ||| |||||| |||||||| | | ||||||||||||||||||    
T  26565663 tattttgagattctgctatgaatttgaatcgttaaaagtgaataaagttacaaaattctgaattttatgatttaaggcagaattttgacaacaatggtt 26565761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 26340212 - 26340263
Alignment:
Q  383 atcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 435  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  26340212 atcgcaatcaaaatcgaagaattttactcaa-aacttttatagaatcgatata 26340263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 323 - 441
Target Start/End: Original strand, 22687046 - 22687164
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaactttt 421  Q
    |||| |||||||||| ||| || ||| ||||||| ||| ||||||||| ||  || ||| |||| ||| |||||| |||| |||||||||||  ||||||    
T  22687046 ttgttaaaatcgggattttgcttcagatcgaaagagaagagcaaaatc-gagaatcgtaaaatcacaaccaaaattgaagaattttactcaactactttt 22687144  T
Q  422 gtagaatcgatataggaaat 441  Q
    |||||||||||||| |||||    
T  22687145 gtagaatcgatataagaaat 22687164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 599 - 661
Target Start/End: Complemental strand, 4574537 - 4574475
Alignment:
Q  599 tcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 661  Q
    |||||||||||||  |||||| |||||| |||||||||||||||||||||  |||||| ||||    
T  4574537 tcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtcatgattttcacaa 4574475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 400
Target Start/End: Original strand, 10285682 - 10285759
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaa 400  Q
    ||||||||||||||| |||||| ||||||||||| ||| || |||||||  |   ||| |||||||||||||||||||    
T  10285682 ttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcgcaatcaaaatcgaa 10285759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 603 - 656
Target Start/End: Original strand, 17809440 - 17809493
Alignment:
Q  603 tgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggatttt 656  Q
    |||||||||  ||||||||||||||||| ||||| |||||||||||| ||||||    
T  17809440 tgaaggtgagtaaagtcacaaaatcctgaattttgggatttaagtcgcgatttt 17809493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 438
Target Start/End: Original strand, 21157495 - 21157587
Alignment:
Q  339 tttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 438  Q
    |||||| ||| || ||||||||||||||||||       ||| |||| |||||||||| ||||||||||| ||||  |||||||||||||| ||||||||    
T  21157495 tttacttcagatcaaaagggaatagcaaaatc-------gtaaaatctcaatcaaaattgaaggattttattcaactacttttgtagaatctatatagga 21157587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 323 - 407
Target Start/End: Original strand, 26281169 - 26281251
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggatttt 407  Q
    ||||||||||| ||||||||||  ||||||||| ||||||||||| |||| |   ||| ||||||||||||||| ||||||||||    
T  26281169 ttgtcaaaatcaggactttactttaggtcgaaaaggaatagcaaa-tcaggatc-gtaaaatcgcaatcaaaattgaaggatttt 26281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 17809021 - 17809112
Alignment:
Q  438 aaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    |||| |||||||||||||| ||||| || |||| |||| ||| |||  |||| ||||||||||||||| ||| | ||||| |||||||||||    
T  17809021 aaatcgtaaaatcgcaatcaaaattcatagattctaccaaaacaaaaataatgctaaatatatgttataaattgcatataatcataaatgac 17809112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 140; Significance: 8e-73; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 357 - 669
Target Start/End: Original strand, 7268 - 7588
Alignment:
Q  357 ggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatc 456  Q
    ||||||||||||||   || |||| ||||| ||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||    
T  7268 ggaatagcaaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatc 7367  T
Q  457 gaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgca 548  Q
     |||| |||| |||||||| |||||   |||||||||||||||||| | | ||||||||| |||||||| || |  ||||||||        ||||||||    
T  7368 aaaatcgatgaattttaccaaaaaacaataatactaaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcgtaaaatcgca 7467  T
Q  549 atcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtc 648  Q
    || |||||||||| |||||| ||||||| ||||||||||||||||||   ||||||||||| ||||||||| |||||||||| ||||||| |||||||||    
T  7468 attaaaatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtc 7567  T
Q  649 gggattttgacaacaatggtt 669  Q
    |||||| | ||||||||||||    
T  7568 gggattctaacaacaatggtt 7588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 135; Significance: 8e-70; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 377 - 666
Target Start/End: Original strand, 93538 - 93834
Alignment:
Q  377 tgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccc 476  Q
    |||| ||||| ||||||||||||||||||||| ||||  ||||||||||||||||||||  |||| |||||||||||||| |||| |||||||||||||     
T  93538 tgtaaaatcgtaatcaaaatcgaaggattttattcaactacttttgtagaatcgatataataaatcgtaaaatcgcaatcaaaatcgatggattttacca 93637  T
Q  477 aaaaaatttaatactaaatatatgttatgaatggtata-tagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggatttt 567  Q
    |||| |  || ||||||||||||||||||||| ||||| |||||||||| ||| ||||||| |||        ||||||||||||||||||||||||||     
T  93638 aaaacaaatattactaaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatggatttc 93737  T
Q  568 gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    | ||||||| | ||||| |||||||||| ||| ||||| |||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||||    
T  93738 gcctattttagaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtcgggattttgacaacaatg 93834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 117; Significance: 4e-59; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 323 - 502
Target Start/End: Original strand, 56204 - 56384
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||   |||| || ||||||||||||||||||||||||||||||||| |||||||    
T  56204 ttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 56303  T
Q  423 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca-aaaaatttaatactaaatatatgtt 502  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||| | |||||   |||||||||||||||||    
T  56304 tagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaacaaaaaaaaaatactaaatatatgtt 56384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 80; Significance: 5e-37; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 382 - 528
Target Start/End: Original strand, 8797 - 8944
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-a 480  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||||| |||||| ||| |||||||||||||||| |||| ||||||||||||| ||| |    
T  8797 aatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatagatataagaacttgtaaaatcgcaatcaaaatcgatggattttaccaaaaca 8896  T
Q  481 aatttaatactaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    ||  |||| ||||||||||||||| | | |||||||||||||||||||    
T  8897 aagataatgctaaatatatgttataagttgtatatagtcataaatgac 8944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 565 - 666
Target Start/End: Original strand, 9049 - 9150
Alignment:
Q  565 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 664  Q
    |||| ||||||  ||||| | |||||||||| |||||||||||||||| ||| ||||||||||||  ||||||  |||||| || |||||||||||||||    
T  9049 tttgcctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaa 9148  T
Q  665 tg 666  Q
    ||    
T  9149 tg 9150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 541 - 666
Target Start/End: Original strand, 105 - 231
Alignment:
Q  541 aaatcgcaatcaaaatcgatggatttt-gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagg 639  Q
    ||||| ||||||||||||||||||||| | ||||||| | ||| |||||||||||| |||||||||| |||||||||||| |||||||||| ||||||||    
T  105 aaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttagg 204  T
Q  640 atttaagtcgggattttgacaacaatg 666  Q
    |||||||||||||| ||  ||||||||    
T  205 atttaagtcgggatcttatcaacaatg 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 382 - 472
Target Start/End: Original strand, 42 - 131
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttt 472  Q
    ||||| || |||||||||||||||||||||||  ||||| |||||||||||||| |||||||||||||| ||||| |||| ||||||||||    
T  42 aatcgaaaccaaaatcgaaggattttactcaactacttt-gtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggatttt 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 326 - 438
Target Start/End: Original strand, 14708 - 14820
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    ||||||||||| ||||||| || ||||||| ||| |||||||||| | ||  ||| ||||||||||||||||||||||||||| ||||  ||||||||||    
T  14708 tcaaaatcggggctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttattcaaagacttttgtag 14807  T
Q  426 aatcgatatagga 438  Q
    ||||||| |||||    
T  14808 aatcgatgtagga 14820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 38306 - 38420
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||| | ||  ||| ||| |||||| | |||||||||||||||||| | |||||||    
T  38306 ttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaattgcaatc-agatcgaaggattttactcatggacttttg 38404  T
Q  423 tagaatcgatatagga 438  Q
    |||||||||| |||||    
T  38405 tagaatcgatgtagga 38420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 54; Significance: 2e-21; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 573 - 666
Target Start/End: Original strand, 48825 - 48918
Alignment:
Q  573 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 666  Q
    ||||||||||||  ||||||||| |||||||||||||||| |||||  |||||| || |||||||||||||||||||| ||||| |||||||||    
T  48825 ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaatg 48918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 382 - 479
Target Start/End: Original strand, 48500 - 48597
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa 479  Q
    |||| |||||||||||||||||||||||| ||  |||||||||||||||||| | ||| | |||||||||| ||| |||| |||||| |||| |||||    
T  48500 aatctcaatcaaaatcgaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcgatggactttatccaaa 48597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 382 - 473
Target Start/End: Original strand, 61152 - 61243
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta 473  Q
    |||| ||||||||||||||| |||||||| ||  |||||||||||||||||||| ||||| ||||||||| || | |||| |||||| ||||    
T  61152 aatcacaatcaaaatcgaagaattttacttaactacttttgtagaatcgatatatgaaatcgtaaaatcgtaaccaaaatcgatggacttta 61243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 328 - 456
Target Start/End: Complemental strand, 1015 - 887
Alignment:
Q  328 aaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacat-gtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtaga 426  Q
    |||||| ||| ||| || |||||| |||||||| ||||||||  ||| || ||| ||| |||||||||||||||| |||||||||||  |||||||||||    
T  1015 aaaatcaggattttgcttcaggtcaaaagggaagagcaaaatt-gaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtaga 917  T
Q  427 atcgatataggaaattgtaaaatcgcaatc 456  Q
    |  |||||| ||||||||||||||||||||    
T  916 acagatataagaaattgtaaaatcgcaatc 887  T

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Target: scaffold0027 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 382 - 438
Target Start/End: Original strand, 132953 - 133009
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 438  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  132953 aatcgcaatcaaaatcgaaggattttcctcaaggacttttgtagaatcgatgtagga 133009  T

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Target: scaffold0061 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 76088 - 76202
Alignment:
Q  323 ttgtcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 422  Q
    |||||||||||||||||||||| |  ||||||||| |||||||||  | | ||  ||| ||| ||||| || |||||||||||||||||||  |||||||    
T  76088 ttgtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaattgcaat-aagatcgaaggattttactcaaagacttttg 76186  T
Q  423 tagaatcgatatagga 438  Q
    |||||||||| |||||    
T  76187 tagaatcgatgtagga 76202  T

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Target: scaffold2084 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 326 - 420
Target Start/End: Complemental strand, 175 - 81
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttt 420  Q
    ||||||||||||||||||| || ||| ||||||| |||||||||| | ||  ||| ||| | ||| ||||||||||||||||||||||| |||||    
T  175 tcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttactcaaggacttt 81  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 561 - 666
Target Start/End: Original strand, 37191 - 37296
Alignment:
Q  561 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 660  Q
    |||||||  |||||||  |||||| |||||||||| ||| |||||||||||| ||| |  |||||| ||| ||||||  ||||||||||| |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  661 acaatg 666  Q
    ||||||    
T  37291 acaatg 37296  T

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Target: scaffold0150 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 435
Target Start/End: Complemental strand, 33234 - 33176
Alignment:
Q  377 tgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 435  Q
    |||| |||||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  33234 tgtaaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgatata 33176  T

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Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 580 - 665
Target Start/End: Original strand, 35103 - 35188
Alignment:
Q  580 attctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 665  Q
    ||||||| ||| |||| ||||||| |||||||| |||||  ||||||  || ||||||| |||||||||| |||||||||||||||    
T  35103 attctacaatgaatttgagtcgttaaaggtgaataaagttccaaaattatgaattttagaatttaagtcgagattttgacaacaat 35188  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 386 - 435
Target Start/End: Complemental strand, 145875 - 145826
Alignment:
Q  386 gcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 435  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||    
T  145875 gcaatcaaaatcgaaggattttactcacttacttttgtagaatcgatata 145826  T

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Target: scaffold0526 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 326 - 438
Target Start/End: Complemental strand, 8503 - 8391
Alignment:
Q  326 tcaaaatcgggactttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 425  Q
    |||||||||||| ||||||  | ||||||||||| ||| |||||  | ||   || ||| ||| ||||||||||||||||||||||||| | || |||||    
T  8503 tcaaaatcgggagtttactttaagtcgaaagggagtagtaaaattgggactcataaaattgcagtcaaaatcgaaggattttactcaaggagttgtgtag 8404  T
Q  426 aatcgatatagga 438  Q
    ||| |||||||||    
T  8403 aattgatatagga 8391  T

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Target: scaffold0526; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 443 - 528
Target Start/End: Complemental strand, 8373 - 8289
Alignment:
Q  443 gtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 528  Q
    |||||||||||||| |||| || ||||| |||| ||| |||| |||||||||||||||| ||| ||| | |||||||||||||||||    
T  8373 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaatataatactaaatatatg-tataaattgcatatagtcataaatgac 8289  T

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Target: scaffold0001 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 382 - 438
Target Start/End: Complemental strand, 142920 - 142864
Alignment:
Q  382 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 438  Q
    ||||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||||    
T  142920 aatcgcaattaaaattgaaggattttactcaaggagttttgtagaatagatatagga 142864  T

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Target: scaffold0182 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 438
Target Start/End: Complemental strand, 24722 - 24621
Alignment:
Q  337 actttactccaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatag 436  Q
    |||||||| || ||||||||||| |||||||||| | ||  ||| ||| | |||||||||| || ||||||||||||    ||||||||||||||| |||    
T  24722 actttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaattgtaatcaaaatcaaaagattttactcaaatttttttgtagaatcgatgtag 24623  T
Q  437 ga 438  Q
    ||    
T  24622 ga 24621  T

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