View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1857_low_1 (Length: 669)

Name: NF1857_low_1
Description: NF1857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1857_low_1
NF1857_low_1
[»] chr8 (40 HSPs)
chr8 (108-665)||(5921834-5922398)
chr8 (103-451)||(7489057-7489414)
chr8 (103-451)||(11879599-11879955)
chr8 (103-451)||(11897015-11897371)
chr8 (108-450)||(45403029-45403379)
chr8 (159-448)||(15294672-15294968)
chr8 (159-448)||(15475041-15475337)
chr8 (108-401)||(23142224-23142524)
chr8 (106-448)||(19704234-19704583)
chr8 (161-449)||(29384144-29384444)
chr8 (164-450)||(17646993-17647291)
chr8 (122-431)||(32424354-32424670)
chr8 (161-451)||(22910035-22910332)
chr8 (103-411)||(6810861-6811174)
chr8 (108-451)||(31424162-31424514)
chr8 (177-446)||(3094092-3094378)
chr8 (108-235)||(24414066-24414193)
chr8 (216-453)||(27836351-27836596)
chr8 (161-312)||(15761190-15761344)
chr8 (113-223)||(2040354-2040464)
chr8 (375-451)||(477101-477177)
chr8 (111-225)||(16752256-16752370)
chr8 (348-453)||(15761466-15761571)
chr8 (111-220)||(40541602-40541711)
chr8 (347-451)||(24056594-24056698)
chr8 (231-446)||(6292246-6292467)
chr8 (138-241)||(17566315-17566418)
chr8 (144-211)||(27836114-27836181)
chr8 (100-241)||(15231838-15231979)
chr8 (127-214)||(7262006-7262093)
chr8 (406-455)||(23136344-23136393)
chr8 (136-258)||(24056377-24056499)
chr8 (326-441)||(15231733-15231848)
chr8 (187-260)||(8582241-8582314)
chr8 (276-361)||(9212202-9212295)
chr8 (387-451)||(17788372-17788436)
chr8 (161-313)||(26574949-26575108)
chr8 (409-453)||(27672303-27672347)
chr8 (406-449)||(9036758-9036801)
chr8 (223-284)||(30240264-30240326)
[»] chr5 (33 HSPs)
chr5 (4-450)||(43234868-43235322)
chr5 (108-449)||(18843716-18844065)
chr5 (110-451)||(19578941-19579292)
chr5 (166-449)||(23172265-23172560)
chr5 (108-439)||(41688445-41688782)
chr5 (110-451)||(18051314-18051660)
chr5 (108-401)||(20320992-20321293)
chr5 (161-454)||(21058988-21059288)
chr5 (166-450)||(38158101-38158383)
chr5 (103-452)||(22645501-22645850)
chr5 (108-442)||(27339966-27340307)
chr5 (136-306)||(19042235-19042404)
chr5 (326-450)||(20923718-20923842)
chr5 (103-223)||(41427654-41427774)
chr5 (111-213)||(15051879-15051981)
chr5 (163-310)||(43005693-43005841)
chr5 (270-401)||(19979648-19979787)
chr5 (165-313)||(26021465-26021612)
chr5 (376-448)||(19042444-19042516)
chr5 (108-220)||(19377841-19377953)
chr5 (171-223)||(22984643-22984695)
chr5 (161-313)||(24648161-24648306)
chr5 (103-223)||(13341471-13341591)
chr5 (103-180)||(6852340-6852417)
chr5 (384-448)||(20320926-20320990)
chr5 (358-451)||(13342024-13342116)
chr5 (161-222)||(17624837-17624898)
chr5 (377-446)||(24106645-24106714)
chr5 (361-453)||(41427081-41427173)
chr5 (173-220)||(30799635-30799682)
chr5 (383-449)||(13350122-13350188)
chr5 (164-220)||(15446450-15446506)
chr5 (179-223)||(30804169-30804213)
[»] chr6 (45 HSPs)
chr6 (111-450)||(15527892-15528239)
chr6 (103-451)||(17103201-17103550)
chr6 (108-450)||(26053075-26053425)
chr6 (108-450)||(26073128-26073478)
chr6 (101-451)||(7223518-7223872)
chr6 (103-453)||(19748330-19748688)
chr6 (101-451)||(27233071-27233407)
chr6 (103-451)||(17543504-17543870)
chr6 (103-451)||(23897810-23898165)
chr6 (103-451)||(11327336-11327701)
chr6 (111-450)||(17250057-17250404)
chr6 (103-324)||(7918124-7918343)
chr6 (108-451)||(30912185-30912542)
chr6 (228-454)||(21354744-21354970)
chr6 (103-267)||(22498214-22498378)
chr6 (201-454)||(10508889-10509156)
chr6 (326-451)||(6943465-6943590)
chr6 (286-450)||(7918338-7918510)
chr6 (108-260)||(3573678-3573831)
chr6 (292-442)||(22498848-22499006)
chr6 (101-223)||(27890621-27890743)
chr6 (347-453)||(18491063-18491169)
chr6 (161-447)||(2912093-2912373)
chr6 (108-235)||(27614435-27614562)
chr6 (165-260)||(4841665-4841760)
chr6 (371-453)||(5422798-5422880)
chr6 (101-191)||(21354942-21355032)
chr6 (373-448)||(3573984-3574059)
chr6 (109-223)||(31108390-31108504)
chr6 (108-220)||(33583445-33583557)
chr6 (358-447)||(33583766-33583855)
chr6 (102-223)||(33592924-33593044)
chr6 (348-430)||(4841946-4842026)
chr6 (165-214)||(8275366-8275415)
chr6 (373-454)||(10958239-10958320)
chr6 (346-423)||(18490910-18490987)
chr6 (161-222)||(20432425-20432486)
chr6 (358-441)||(8285760-8285843)
chr6 (137-223)||(4596661-4596747)
chr6 (358-423)||(18490998-18491063)
chr6 (375-443)||(8545019-8545087)
chr6 (164-214)||(1179068-1179119)
chr6 (145-184)||(27890582-27890621)
chr6 (270-314)||(5422601-5422645)
chr6 (346-453)||(27890131-27890238)
[»] chr4 (46 HSPs)
chr4 (102-450)||(9770112-9770468)
chr4 (109-450)||(9911191-9911541)
chr4 (108-451)||(36120823-36121173)
chr4 (103-448)||(5375666-5376020)
chr4 (161-451)||(5361797-5362093)
chr4 (108-451)||(23064740-23065093)
chr4 (145-451)||(10142898-10143213)
chr4 (163-455)||(8889223-8889512)
chr4 (161-449)||(17466080-17466376)
chr4 (113-451)||(13023566-13023903)
chr4 (139-312)||(8010946-8011120)
chr4 (326-450)||(8011221-8011345)
chr4 (161-451)||(37240261-37240536)
chr4 (326-451)||(13551627-13551752)
chr4 (103-313)||(6346729-6346940)
chr4 (101-220)||(55476226-55476345)
chr4 (346-454)||(7044723-7044831)
chr4 (120-254)||(13551463-13551597)
chr4 (100-310)||(24719722-24719926)
chr4 (163-313)||(9149556-9149708)
chr4 (346-451)||(18459733-18459838)
chr4 (346-446)||(7815561-7815661)
chr4 (161-300)||(10394768-10394907)
chr4 (347-450)||(4156763-4156866)
chr4 (164-313)||(7044907-7045057)
chr4 (103-313)||(7045086-7045299)
chr4 (357-451)||(24719516-24719610)
chr4 (345-451)||(6347088-6347194)
chr4 (346-451)||(7452419-7452523)
chr4 (136-236)||(5943066-5943166)
chr4 (161-233)||(7452731-7452802)
chr4 (159-223)||(8367437-8367501)
chr4 (102-216)||(4157269-4157386)
chr4 (102-216)||(4157556-4157673)
chr4 (164-239)||(8931441-8931516)
chr4 (399-450)||(9149813-9149864)
chr4 (161-226)||(18459463-18459528)
chr4 (400-451)||(5846458-5846509)
chr4 (163-222)||(8743599-8743658)
chr4 (161-195)||(4157050-4157084)
chr4 (346-408)||(7803049-7803110)
chr4 (346-408)||(7825002-7825064)
chr4 (275-313)||(18459563-18459601)
chr4 (178-223)||(5884129-5884174)
chr4 (111-184)||(8409790-8409863)
chr4 (406-451)||(8744087-8744132)
[»] scaffold0186 (1 HSPs)
scaffold0186 (111-457)||(8436-8788)
[»] chr1 (46 HSPs)
chr1 (108-451)||(21846053-21846398)
chr1 (101-453)||(9351835-9352195)
chr1 (103-454)||(13100187-13100545)
chr1 (103-451)||(18304592-18304941)
chr1 (112-451)||(9954816-9955165)
chr1 (103-451)||(25146542-25146898)
chr1 (159-450)||(23528656-23528955)
chr1 (108-443)||(16125234-16125580)
chr1 (136-448)||(19009755-19010073)
chr1 (103-450)||(13276033-13276395)
chr1 (101-449)||(42179843-42180193)
chr1 (104-455)||(9128612-9128974)
chr1 (103-449)||(17869524-17869873)
chr1 (163-448)||(12513283-12513566)
chr1 (224-451)||(9327109-9327345)
chr1 (108-241)||(14074262-14074395)
chr1 (161-331)||(47785986-47786155)
chr1 (100-260)||(17055691-17055850)
chr1 (161-361)||(32881416-32881617)
chr1 (326-451)||(41032675-41032800)
chr1 (111-223)||(17197311-17197423)
chr1 (103-257)||(41032547-41032701)
chr1 (326-451)||(17056004-17056129)
chr1 (346-451)||(18337547-18337651)
chr1 (375-450)||(30619075-30619150)
chr1 (355-450)||(14074404-14074499)
chr1 (108-221)||(12002640-12002751)
chr1 (278-432)||(18228230-18228380)
chr1 (138-294)||(16434673-16434829)
chr1 (110-221)||(8773505-8773613)
chr1 (363-450)||(12800623-12800710)
chr1 (166-241)||(30619159-30619234)
chr1 (384-451)||(34478833-34478900)
chr1 (102-204)||(27502128-27502230)
chr1 (346-458)||(8772696-8772809)
chr1 (144-193)||(9321550-9321599)
chr1 (346-447)||(27917477-27917578)
chr1 (358-454)||(27502239-27502335)
chr1 (161-220)||(22789421-22789480)
chr1 (346-452)||(24117005-24117111)
chr1 (406-451)||(47785791-47785836)
chr1 (189-241)||(18228481-18228533)
chr1 (103-154)||(9954770-9954821)
chr1 (161-195)||(17055999-17056033)
chr1 (414-451)||(16417308-16417345)
chr1 (399-447)||(12003241-12003289)
[»] chr3 (54 HSPs)
chr3 (103-451)||(28745769-28746131)
chr3 (103-452)||(29067282-29067631)
chr3 (108-447)||(39427905-39428257)
chr3 (108-451)||(24619976-24620333)
chr3 (159-450)||(20756039-20756321)
chr3 (164-452)||(8155964-8156262)
chr3 (161-445)||(17064326-17064604)
chr3 (136-450)||(22137278-22137599)
chr3 (161-449)||(3449142-3449419)
chr3 (163-441)||(21963438-21963726)
chr3 (163-441)||(21985874-21986162)
chr3 (226-432)||(22494679-22494892)
chr3 (163-377)||(42696920-42697143)
chr3 (111-452)||(22355848-22356184)
chr3 (161-301)||(25870154-25870294)
chr3 (326-450)||(30727696-30727820)
chr3 (103-223)||(8592173-8592293)
chr3 (326-450)||(24649693-24649818)
chr3 (108-313)||(27676580-27676786)
chr3 (111-223)||(3041458-3041570)
chr3 (139-304)||(6136379-6136543)
chr3 (177-331)||(15515106-15515258)
chr3 (159-288)||(13286113-13286243)
chr3 (111-223)||(18014226-18014338)
chr3 (338-451)||(25870389-25870506)
chr3 (346-451)||(15806531-15806635)
chr3 (346-451)||(27676355-27676460)
chr3 (111-223)||(8560239-8560351)
chr3 (101-221)||(20766673-20766793)
chr3 (346-440)||(10872971-10873065)
chr3 (350-451)||(17796267-17796368)
chr3 (350-451)||(19104707-19104808)
chr3 (108-260)||(10872494-10872646)
chr3 (111-223)||(22971044-22971155)
chr3 (350-451)||(17796376-17796477)
chr3 (350-451)||(17796485-17796586)
chr3 (350-451)||(19104816-19104917)
chr3 (350-451)||(19104925-19105026)
chr3 (161-234)||(28135986-28136059)
chr3 (111-223)||(19348788-19348900)
chr3 (103-223)||(27090677-27090797)
chr3 (161-330)||(9152817-9152984)
chr3 (136-254)||(17796771-17796887)
chr3 (136-254)||(19105211-19105327)
chr3 (103-211)||(41671426-41671534)
chr3 (108-223)||(21553672-21553786)
chr3 (102-168)||(24649522-24649588)
chr3 (371-449)||(28135723-28135801)
chr3 (111-184)||(9169869-9169942)
chr3 (136-194)||(13006089-13006147)
chr3 (406-446)||(42696870-42696910)
chr3 (161-223)||(27055328-27055390)
chr3 (229-312)||(6861039-6861123)
chr3 (358-450)||(13005927-13006019)
[»] chr7 (58 HSPs)
chr7 (102-456)||(4247350-4247712)
chr7 (137-451)||(24725280-24725607)
chr7 (108-449)||(5058530-5058878)
chr7 (108-450)||(44944624-44944978)
chr7 (108-412)||(17811385-17811698)
chr7 (108-450)||(5715290-5715631)
chr7 (108-444)||(20570664-20571002)
chr7 (111-451)||(27221417-27221762)
chr7 (163-451)||(14055250-14055552)
chr7 (163-451)||(14365278-14365580)
chr7 (161-451)||(8329876-8330175)
chr7 (161-448)||(8346363-8346660)
chr7 (164-450)||(21846282-21846554)
chr7 (161-454)||(8343634-8343933)
chr7 (161-451)||(7730191-7730472)
chr7 (270-450)||(24990012-24990200)
chr7 (275-454)||(26281256-26281442)
chr7 (318-443)||(8571250-8571375)
chr7 (108-266)||(24989553-24989710)
chr7 (326-451)||(39182259-39182383)
chr7 (326-450)||(22687669-22687793)
chr7 (326-450)||(11326386-11326510)
chr7 (161-441)||(11324988-11325275)
chr7 (326-451)||(9685249-9685374)
chr7 (165-457)||(26617313-26617612)
chr7 (102-257)||(11326484-11326639)
chr7 (161-313)||(26565380-26565532)
chr7 (111-223)||(25842513-25842625)
chr7 (161-257)||(39182357-39182453)
chr7 (108-223)||(8304321-8304436)
chr7 (120-254)||(9685085-9685219)
chr7 (111-223)||(1981107-1981217)
chr7 (103-267)||(8572329-8572491)
chr7 (177-297)||(27509260-27509379)
chr7 (168-331)||(6916907-6917068)
chr7 (347-450)||(30294175-30294275)
chr7 (164-259)||(8329814-8329909)
chr7 (111-217)||(23618211-23618317)
chr7 (161-246)||(1977761-1977845)
chr7 (137-223)||(4574965-4575051)
chr7 (166-299)||(30294404-30294538)
chr7 (326-395)||(1977707-1977776)
chr7 (364-451)||(8630001-8630088)
chr7 (171-259)||(8346308-8346396)
chr7 (326-430)||(27509948-27510052)
chr7 (161-223)||(21157525-21157587)
chr7 (356-454)||(26565663-26565761)
chr7 (161-226)||(22687099-22687164)
chr7 (168-220)||(26340212-26340263)
chr7 (384-446)||(4574475-4574537)
chr7 (137-223)||(8629536-8629622)
chr7 (103-185)||(10285677-10285759)
chr7 (388-441)||(17809440-17809493)
chr7 (108-192)||(26281169-26281251)
chr7 (161-216)||(17741886-17741941)
chr7 (223-313)||(17809021-17809112)
chr7 (136-184)||(8253991-8254039)
chr7 (320-352)||(22687155-22687187)
[»] chr2 (45 HSPs)
chr2 (103-456)||(31237750-31238112)
chr2 (108-451)||(1404782-1405133)
chr2 (103-451)||(20063713-20064078)
chr2 (150-451)||(36429847-36430156)
chr2 (163-449)||(35565788-35566082)
chr2 (164-451)||(15588690-15588979)
chr2 (108-289)||(30432984-30433165)
chr2 (103-298)||(19262090-19262285)
chr2 (223-448)||(31578007-31578238)
chr2 (284-451)||(30432418-30432593)
chr2 (326-451)||(23863326-23863451)
chr2 (108-313)||(25538924-25539130)
chr2 (114-223)||(27523881-27523990)
chr2 (111-223)||(974573-974686)
chr2 (111-217)||(20034004-20034110)
chr2 (326-448)||(25539231-25539353)
chr2 (326-450)||(19491855-19491980)
chr2 (110-220)||(21869102-21869212)
chr2 (167-331)||(1690566-1690730)
chr2 (344-452)||(1690785-1690893)
chr2 (103-223)||(19245824-19245944)
chr2 (111-217)||(7302023-7302129)
chr2 (164-313)||(16766930-16767079)
chr2 (161-294)||(13502505-13502639)
chr2 (161-313)||(27406935-27407088)
chr2 (99-310)||(8428369-8428581)
chr2 (137-223)||(34578124-34578210)
chr2 (348-451)||(17995054-17995157)
chr2 (347-453)||(5395674-5395780)
chr2 (345-451)||(15266081-15266187)
chr2 (223-310)||(34841728-34841816)
chr2 (356-450)||(16766710-16766804)
chr2 (223-310)||(19492079-19492168)
chr2 (348-414)||(31023259-31023325)
chr2 (101-216)||(27749281-27749396)
chr2 (390-451)||(15627654-15627715)
chr2 (405-450)||(29660893-29660938)
chr2 (161-234)||(29661093-29661166)
chr2 (190-321)||(5395384-5395515)
chr2 (407-451)||(19245152-19245196)
chr2 (371-450)||(19257568-19257647)
chr2 (363-451)||(27750194-27750282)
chr2 (358-414)||(34841592-34841648)
chr2 (229-309)||(31023450-31023531)
chr2 (163-211)||(15627991-15628039)
[»] scaffold0417 (1 HSPs)
scaffold0417 (142-454)||(7268-7588)
[»] scaffold0042 (2 HSPs)
scaffold0042 (163-451)||(93539-93834)
scaffold0042 (161-194)||(93602-93635)
[»] scaffold0016 (2 HSPs)
scaffold0016 (103-287)||(56199-56384)
scaffold0016 (283-331)||(58736-58784)
[»] scaffold0603 (2 HSPs)
scaffold0603 (164-313)||(8794-8944)
scaffold0603 (350-451)||(9049-9150)
[»] scaffold0510 (2 HSPs)
scaffold0510 (326-451)||(105-231)
scaffold0510 (161-257)||(36-131)
[»] scaffold0079 (2 HSPs)
scaffold0079 (111-223)||(14708-14820)
scaffold0079 (371-451)||(15096-15176)
[»] scaffold0017 (1 HSPs)
scaffold0017 (103-223)||(38301-38420)
[»] scaffold0061 (3 HSPs)
scaffold0061 (101-223)||(76081-76202)
scaffold0061 (347-446)||(1932-2032)
scaffold0061 (347-446)||(7443-7543)
[»] scaffold0534 (1 HSPs)
scaffold0534 (138-241)||(887-990)
[»] scaffold0526 (2 HSPs)
scaffold0526 (100-223)||(8391-8514)
scaffold0526 (228-313)||(8289-8373)
[»] scaffold0048 (3 HSPs)
scaffold0048 (358-451)||(48825-48918)
scaffold0048 (161-258)||(61146-61243)
scaffold0048 (164-264)||(48497-48597)
[»] scaffold0027 (1 HSPs)
scaffold0027 (159-223)||(132945-133009)
[»] scaffold2084 (1 HSPs)
scaffold2084 (111-205)||(81-175)
[»] scaffold0028 (1 HSPs)
scaffold0028 (161-220)||(145826-145885)
[»] scaffold0182 (1 HSPs)
scaffold0182 (122-223)||(24621-24722)
[»] scaffold0150 (1 HSPs)
scaffold0150 (163-220)||(33176-33233)
[»] scaffold0036 (1 HSPs)
scaffold0036 (346-451)||(37191-37296)
[»] scaffold0001 (1 HSPs)
scaffold0001 (164-223)||(142864-142923)
[»] scaffold0115 (1 HSPs)
scaffold0115 (365-450)||(35103-35188)
[»] scaffold1178 (1 HSPs)
scaffold1178 (165-223)||(568-626)


Alignment Details
Target: chr8 (Bit Score: 473; Significance: 0; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 108 - 665
Target Start/End: Complemental strand, 5922398 - 5921834
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| || ||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  5922398 ttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttg 5922299  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922298 tagaatcgatataggaaattgtaaaatcgcaatctaa-tcgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 5922200  T
Q  308 aatgacctaatttataagaaatcgcaa--------tcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5922199 aatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatataagtcgttgaaggtgaaga 5922100  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgtaatgacattaagtaccctaaacctctacttaaaagtggtaact 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922099 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgtaatgacattaagtaccctaaacctctacttaaaagtggtaact 5922000  T
Q  500 ttaacaattcatgtcacgtgactcaatttagatctaattaacttaatctttacaaaaaccggtttgtaagataaggactaccctctatttataaatacat 599  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5921999 ctaacaattcatgtcacgtgactcaatttagatctaattaacttaatctttacaaaaaccagtttgtaagataaggactaccctctatttataaatacat 5921900  T
Q  600 tgttggaccgtatctattcaacgtaggtgttttgagcgattataaaacatctatctatctgtagta 665  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5921899 tgttggaccgtatctattcaacttaggtgttttgagcgattataaaacatctatctatctgtagta 5921834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 103 - 451
Target Start/End: Original strand, 7489057 - 7489414
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||| |||||||||||| || ||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||    
T  7489057 caaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggac 7489156  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||| ||||||  ||||||||||||||||||||| |||| |||||||    
T  7489157 ttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttactcaaaaatattaatactaaatatatgttataaatgatatatag 7489256  T
Q  303 tcataaatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctat----tttgggattctactatggatttaagtcgttga 390  Q
    ||||||||||| ||||||||||||||||        |||||||||||||||  |||||||||||    ||| | ||||||||| |||||| |||||||||    
T  7489257 tcataaatgacttaatttataagaaatcataaaattgcaatcaaaatcgataaattttgtctattttatttagaattctactacggattttagtcgttga 7489356  T
Q  391 aggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||||||   |||||| ||| |||||| ||||||| | ||||||||||||| ||||    
T  7489357 aggtgaagaaag---caaaattctgtattttacgatttaattggggattttgacaataatg 7489414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 103 - 451
Target Start/End: Complemental strand, 11879955 - 11879599
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||||||| ||||||||  | | ||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||  ||||||    
T  11879955 caaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaac 11879856  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    |||| |||||||||||||| |||||||||||||||| || |||| ||||||||||||| |||||   |||||||||||||||||||| ||||||||||||    
T  11879855 ttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatag 11879756  T
Q  303 tcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    |||||||| || || ||||||||||        ||||||||||||||||||| |||||  ||||||| |||||||||||| ||||| |||||||||| ||    
T  11879755 tcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagt 11879656  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||  |||||||||| ||||||||||||||||| | |||||||||||||||    
T  11879655 gaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatg 11879599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 103 - 451
Target Start/End: Complemental strand, 11897371 - 11897015
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||||||| ||||||||  | | ||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||  ||||||    
T  11897371 caaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaac 11897272  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    |||| |||||||||||||| |||||||||||||||| || |||| ||||||||||||| |||||   |||||||||||||||||||| ||||||||||||    
T  11897271 ttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatag 11897172  T
Q  303 tcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    |||||||| || || ||||||||||        ||||||||||||||||||| |||||  ||||||| |||||||||||| ||||| |||||||||| ||    
T  11897171 tcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagt 11897072  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||  |||||||||| ||||||||||||||||| | |||||||||||||||    
T  11897071 gaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatg 11897015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 108 - 450
Target Start/End: Complemental strand, 45403379 - 45403029
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||||||||||||| |||  | |||||||||||||||||||    ||||||||||||||||||||||||||||||||||||| ||  |||||||    
T  45403379 ttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttg 45403280  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaat-ttaatactaaatatatgttatgaatggtatatagtcat 306  Q
    |||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| |||||||  ||||| |||||||||||||| ||||||||||  ||||    
T  45403279 tagaatcgatataggaaattgtaaaa-cgcaatcaaaatcgatagattttaccaaaaaaataataatattaaatatatgttataaatggtatattatcat 45403181  T
Q  307 aaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaag 398  Q
    ||||||| |  || |||||        ||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||||||| |||    
T  45403180 aaatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaag 45403081  T
Q  399 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||| ||||||| |||||||||| |||||||||| |||||||||||||||    
T  45403080 aaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaacaat 45403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 159 - 448
Target Start/End: Complemental strand, 15294968 - 15294672
Alignment:
Q  159 actcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta 258  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||| | ||||  ||||||||||    
T  15294968 actcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggatttta 15294869  T
Q  259 cccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggatt 350  Q
    || ||||||  |||||||||||||||||||  ||| || |||||||||||||||| || ||||||||        |||||||||||||||||||||||||    
T  15294868 cctaaaaaa-ataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggatt 15294770  T
Q  351 ttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
    ||| ||||||||| |||||||||| ||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  15294769 ttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 159 - 448
Target Start/End: Complemental strand, 15475337 - 15475041
Alignment:
Q  159 actcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta 258  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||| | ||||  ||||||||||    
T  15475337 actcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggatttta 15475238  T
Q  259 cccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggatt 350  Q
    || ||||||  |||||||||||||||||||  ||| || |||||||||||||||| || ||||||||        |||||||||||||||||||||||||    
T  15475237 cctaaaaaa-ataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggatt 15475139  T
Q  351 ttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
    ||| ||||||||| |||||||||| ||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  15475138 ttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 108 - 401
Target Start/End: Complemental strand, 23142524 - 23142224
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||| |||||||| ||| |  ||||||||||||||||||   ||| |||||||||||||||  |||||||| ||||||| |||| ||||||||    
T  23142524 ttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatcgcaatttaaatcgaatgattttagtcaaaaacttttg 23142425  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||   |||||||||||||||||||| |||||||||||||||||    
T  23142424 tagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggacttta-ccaaaaataataatactaaatatatgttataaatggtatatagtcata 23142326  T
Q  308 aatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    |||||| |||||||||||        ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  23142325 aatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaggattctactatggatttcagtcgttgaagttgaaga 23142226  T
Q  400 aa 401  Q
    ||    
T  23142225 aa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 106 - 448
Target Start/End: Original strand, 19704234 - 19704583
Alignment:
Q  106 gtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttt 205  Q
    |||||| | ||| |||| |||||||| || | |||||||||||||||||  | |||||||||||||||||||||||| ||||| |||||||||| ||| |    
T  19704234 gtttgttagaattgggattttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgt 19704333  T
Q  206 tgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtca 305  Q
    ||||||||||||||  |||||  ||||||| ||||| |||| ||||||||||||| ||||||   || |||||||||||||||  |||||||||||||||    
T  19704334 tgtagaatcgatatttgaaatcttaaaatcacaatcaaaatcgatggattttacctaaaaaa--aaaaactaaatatatgttacaaatggtatatagtca 19704431  T
Q  306 taaatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaa 397  Q
    ||||| || |  |||||||||||||        ||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||    
T  19704432 taaataacttggtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaa 19704531  T
Q  398 gaaagtcacaaaatcc-tggattttaggatttaagtcgggattttgacaaca 448  Q
    ||||||| ||||| || || |||||| ||||||||| |||||||||||||||    
T  19704532 gaaagtcgcaaaaaccttgaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 161 - 449
Target Start/End: Original strand, 29384144 - 29384444
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||||||  ||||| ||||| |||||||||||||| |||| |||||||||||||    
T  29384144 tcgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggattttacc 29384243  T
Q  261 caaaaaatt-----taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatgg 347  Q
     ||||||       |||||||||||||||||||| ||||||||||||||||||||||  |  ||||||||||||||        |||||||| ||||||     
T  29384244 aaaaaaaaaaatactaatactaaatatatgttataaatggtatatagtcataaatgaattgttttataagaaatcgtaaaatcgcaatcaaa-tcgatga 29384342  T
Q  348 attttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 447  Q
    |||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||   |||||||||||||||  | |||||||||||||    
T  29384343 attttgcctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatctaagattttaggatttaaacctggattttgacaac 29384442  T
Q  448 aa 449  Q
    ||    
T  29384443 aa 29384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 164 - 450
Target Start/End: Complemental strand, 17647291 - 17646993
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa 263  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| | ||    
T  17647291 taaaatcgcaatcaaaatcgaaggattttactcaactagttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttatcaaa 17647192  T
Q  264 aaaatt--taatactaaatatatgttatgaatggtatatagtcataaa--tgacctaatttataagaaatcg--------caatcaaaatcgatggattt 351  Q
    |||| |  ||| | ||||||||| |||  ||||||||||| | | |||  ||||    ||||||||||||||        ||||||||||||||| ||||    
T  17647191 aaaaataataacattaaatatattttacaaatggtatataataaaaaaaatgactaggtttataagaaatcgttaaataacaatcaaaatcgatgaattt 17647092  T
Q  352 tgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |  ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||    
T  17647091 ttcctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 122 - 431
Target Start/End: Complemental strand, 32424670 - 32424354
Alignment:
Q  122 actttacttcgaga-cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 220  Q
    |||||||||| ||| |||| |||||||||||| |  | ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |||    
T  32424670 actttacttcaagatcgaaggggaatagcaaa-tcggaactcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcgagata 32424572  T
Q  221 ggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaat--atatgttatgaatggtatatagtcataaatgacctaat 318  Q
    ||||||||||||||||||||  |||| ||| ||||||| ||| |||| ||||||||||||  ||||||||| ||||||||||||||||||||||| || |    
T  32424571 ggaaattgtaaaatcgcaataaaaatcgatagattttatccagaaaaattaatactaaatatatatgttataaatggtatatagtcataaatgacttagt 32424472  T
Q  319 ttataa--------gaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaa 410  Q
     |||||         ||||||||||||||||| ||  |||||||||||||| ||||||||||||| |||| | ||||| |   |||| ||||||| ||||    
T  32424471 atataataaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggattctactatgaatttgaatcgttaa---tgaaaaaagtcataaaa 32424375  T
Q  411 tcctggattttaggatttaag 431  Q
    ||||  ||||||| |||||||    
T  32424374 tcctaaattttagaatttaag 32424354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 161 - 451
Target Start/End: Original strand, 22910035 - 22910332
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||||||| | |||| ||||||||||| ||||  | |||||||||||||||||| ||||| |||||||||||||| || | ||||   |||| |    
T  22910035 tcgtaaaatcgcaaccgaaattgaaggattttattcaactatttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaagtcgatgatgtttaac 22910134  T
Q  261 caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaat--------cgcaatcaaaatcgatggatttt 352  Q
     |||||| | | |||||| |||||||||| |||||||||||||||||||| || |||||||||||||||        ||||||||||||| |||||||||    
T  22910135 aaaaaaagt-agtactaagtatatgttataaatggtatatagtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggatttt 22910233  T
Q  353 gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    | |||||||  ||||||||||| ||||| |||||||||| ||||||||||||  ||||||||  |||||||||||||||||||||| || ||| |||||    
T  22910234 gcctattttaagattctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagtcgggatgtttacatcaatg 22910332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 103 - 411
Target Start/End: Complemental strand, 6811174 - 6810861
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||||| |||||  ||| |  |||||| ||| ||||||||    | |||||||||||||| ||||||||||| |||||| ||||  ||    
T  6811174 caaggttgtcaaaatcggaactttgtttcaaatcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaagaattttaatcaactac 6811075  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    ||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||| |||||| | ||||||||||||||||||| |||| |||||||    
T  6811074 ttttgtagaatagatataagaaattg-aaaatcgcaatcaaaatcgatggattttaccaaaaaaaat-aatactaaatatatgttataaatgatatatag 6810977  T
Q  303 tcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    | ||||||||| || |||||| |        |||||| ||||||||||||| ||||||| |||||||   |||||||||||||||| |||||||||||||    
T  6810976 ttataaatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgat-gattttgcctattttaaaattctactatggatttgagtcgttgaaggt 6810878  T
Q  395 gaagaaagtcacaaaat 411  Q
    |||||||||| ||||||    
T  6810877 gaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 108 - 451
Target Start/End: Complemental strand, 31424514 - 31424162
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||||| || ||||||||  | |||||| ||  ||||||||    | ||||||||||||||||||||    ||||||||||||||  ||| |||    
T  31424514 ttgtcaaaatcgagattttacttcaggtcgaaagagatgagcaaaatcgacaatcgtaaaatcgcaatcaaaac---aggattttactcaactactcttg 31424418  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaa----tactaaatatatgttatgaatggtatatagt 303  Q
    | |||| |||||| ||||| ||||||| |||||| |||| ||| ||||||||  ||||||   ||    ||||||||||||||||| | |||||||||||    
T  31424417 tggaattgatataagaaatagtaaaattgcaatccaaatcgatagattttacaaaaaaaaaaaaaaaaatactaaatatatgttataattggtatatagt 31424318  T
Q  304 cataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg 395  Q
    |||||| ||| || ||||||||||||||        ||||||||||| |||||||||| ||||||||||||||| |||||||||| |||||||||| | |    
T  31424317 cataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttgggattcttctatggatttgagtcgttgaaaggg 31424218  T
Q  396 aagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||  ||||||||| ||||||| ||||||||| |||||||||||| ||||    
T  31424217 aagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaataatg 31424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 177 - 446
Target Start/End: Original strand, 3094092 - 3094378
Alignment:
Q  177 aaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaa-tcgcaatcgaaattgatggattttacccaaaaaatttaa-ta 274  Q
    ||||| ||||||||||||||||  ||||||||||     ||||| |||||||||||| |||||||| |||||||| ||||||||  ||||||   || ||    
T  3094092 aaaattgaaggattttactcaattacttttgtaggc---atataagaaattgtaaaaatcgcaatcaaaattgatagattttacaaaaaaaaaaaaaata 3094188  T
Q  275 ctaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaa------------------tcgcaatcaaaatcgatggattttgtct 356  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||||||  |||                  ||||||||||||||||||||||||| ||    
T  3094189 ctaaatatatgttataaatggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatcgatggattttgcct 3094288  T
Q  357 attttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 446  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||  |||||||||| |||||| |||||||||||  ||||||||||    
T  3094289 attttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 24414066 - 24414193
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||| || ||||||||||  | ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24414066 ttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatttttg 24414165  T
Q  208 tagaatcgatataggaaattgtaaaatc 235  Q
    ||||||||||||||||||||||||||||    
T  24414166 tagaatcgatataggaaattgtaaaatc 24414193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 216 - 453
Target Start/End: Original strand, 27836351 - 27836596
Alignment:
Q  216 atataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacct 315  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||   ||||   ||||||||||| ||||||| ||||||||||||||||||||||| |    
T  27836351 atataggaaattgtaaaatcacaatcaaaatcgatggattttaccagcaaaaaaaaatactaaatacatgttataaatggtatatagtcataaatgactt 27836450  T
Q  316 aatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcaca 407  Q
    | ||||||||        |||| | ||||||||| |||| ||||||  |||||| | |||||||||||||||| ||| |||||||||||| |||  | ||    
T  27836451 agtttataagaaattgtaaaattgtaatcaaaattgatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaataaaaccgca 27836550  T
Q  408 aaatcctggattttaggatttaagtcgggattttgacaacaatggt 453  Q
    |||||||| |||||||||| |||||  | |||||||||||||||||    
T  27836551 aaatcctgaattttaggatctaagtttgaattttgacaacaatggt 27836596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 161 - 312
Target Start/End: Original strand, 15761190 - 15761344
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||||||||  |||||||||||||||||||||  |||||||||||||||||||| ||| | |||||||||||||| |||| |||||||||||||    
T  15761190 tcgtaaaatcgcaatataaatcgaaggattttactcaattacttttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggattttacc 15761289  T
Q  261 caaa-aaatttaatactaaatatatgttatgaatggtatat--agtcataaatga 312  Q
     ||| |||  |||| ||||||||||||||| ||| ||||||  ||||||||||||    
T  15761290 aaaacaaaaataatgctaaatatatgttataaattgtatatagagtcataaatga 15761344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 2040464 - 2040354
Alignment:
Q  113 aaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaa 212  Q
    ||||||||||||||||||| || |||||| || |||||||||  | ||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  2040464 aaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttactcatggacttttgtagaa 2040365  T
Q  213 tcgatatagga 223  Q
    ||||| |||||    
T  2040364 tcgatgtagga 2040354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 375 - 451
Target Start/End: Original strand, 477101 - 477177
Alignment:
Q  375 ggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaatg 477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 16752370 - 16752256
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||| || |||||||||| || ||||||||| |||||||||| | |||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  16752370 tcaaaattggaactttacttcaagtcgaaagggagtagcaaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttactcaaggaattttgtag 16752271  T
Q  211 aatcgatataggaaa 225  Q
    ||| ||| |||||||    
T  16752270 aattgatgtaggaaa 16752256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 15761466 - 15761571
Alignment:
Q  348 attttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 447  Q
    |||||| ||||||||||||| | ||||| |||| ||||||||||||| || ||| ||||||||||||||| |||||||||||||||| ||||||||||||    
T  15761466 attttgcctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaac 15761565  T
Q  448 aatggt 453  Q
    ||||||    
T  15761566 aatggt 15761571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 40541602 - 40541711
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||||||||||||||| || ||||||| | |||||||||  | ||||||||||||||||||||||| ||| ||||||| ||||| |||| |||||    
T  40541602 tcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttattcaaggacttctgtag 40541701  T
Q  211 aatcgatata 220  Q
    ||||||||||    
T  40541702 aatcgatata 40541711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 347 - 451
Target Start/End: Original strand, 24056594 - 24056698
Alignment:
Q  347 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 446  Q
    |||||||||||||||||||||   |||||||||| ||||||| || ||||| |||||| ||||||||||||||||||||||||||||  |||||||| ||    
T  24056594 gattttgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataa 24056693  T
Q  447 caatg 451  Q
    |||||    
T  24056694 caatg 24056698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 231 - 446
Target Start/End: Original strand, 6292246 - 6292467
Alignment:
Q  231 aaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaat- 329  Q
    ||||||||||  |||||||||||||||| |  |||||| ||||| ||||||||| |||| ||||||||||||| ||||||||| ||  |||||| ||||     
T  6292246 aaatcgcaattaaaattgatggattttatc--aaaaatataatattaaatatattttataaatggtatatagtgataaatgacttagattataataaatt 6292343  T
Q  330 -------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggatttta 422  Q
           |||||||||||||| || |||||   |||||| | ||| |||||||| ||| ||||||| ||| |||| |||||||||||||| |  ||||||    
T  6292344 gtaagaccgcaatcaaaatcgttgaatttttcttattttagaattatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaatttta 6292443  T
Q  423 ggatttaagtcgggattttgacaa 446  Q
     |||||||||||| ||||| ||||    
T  6292444 agatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 17566418 - 17566315
Alignment:
Q  138 aaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgc 237  Q
    |||||||| |||||||||   | ||||||||| |||||||||||||||| |||||||||||  ||||||||||||  |||||| ||||||||||||||||    
T  17566418 aaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgc 17566319  T
Q  238 aatc 241  Q
    ||||    
T  17566318 aatc 17566315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 27836114 - 27836181
Alignment:
Q  144 aatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtaga 211  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27836114 aatagcaaaattaggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtaga 27836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 15231979 - 15231838
Alignment:
Q  100 aatcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaag 199  Q
    ||||||| |||| ||| ||| || ||| |||| || |||||| ||| ||||||||    | ||||||||||||||  ||||||| | ||||||||||||     
T  15231979 aatcaaggttgttaaattcgagattttgcttcaagtcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaactaaaatcgtacgattttactcaac 15231880  T
Q  200 aacttttgtagaatcgatataggaaattgtaaaatcgcaatc 241  Q
     ||||||||||||||||||||  |||||||||||||||||||    
T  15231879 tacttttgtagaatcgatataaaaaattgtaaaatcgcaatc 15231838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 7262093 - 7262006
Alignment:
Q  127 acttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatc 214  Q
    ||||| || ||||||| | |||||||||  | |||||||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  7262093 acttccagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttactcaaggacttttgtagaatc 7262006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 23136393 - 23136344
Alignment:
Q  406 caaaatcctggattttaggatttaagtcgggattttgacaacaatggttg 455  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  23136393 caaaatcctgaattttaggatttaagtcgggattttgacaataatggttg 23136344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 24056377 - 24056499
Alignment:
Q  136 cgaaagggaatagcaaaatt-agtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaat 234  Q
    |||||||||| ||||||||| | || || |||||| | ||||||||||||||||||||||||||  | |||||||||||| |||||  ||||  ||||||    
T  24056377 cgaaagggaagagcaaaattgaata-tcataaaatggtaatcaaaatcgaaggattttactcaactagttttgtagaatcaatataacaaatgttaaaat 24056475  T
Q  235 cgcaatcgaaattgatggatttta 258  Q
    |||||||  ||| ||| |||||||    
T  24056476 cgcaatcataatcgatagatttta 24056499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 326 - 441
Target Start/End: Complemental strand, 15231848 - 15231733
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    ||||||||||||||   | ||||||||| |||||||  |||| || |||| |||| |||||||||||||||||||  || ||||||| |  | |||||||    
T  15231848 aaatcgcaatcaaatatgttggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaacatcgcaaaatcttaaagtttagga 15231749  T
Q  426 tttaagtcgggatttt 441  Q
    ||||| ||| ||||||    
T  15231748 tttaaatcgagatttt 15231733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 8582314 - 8582241
Alignment:
Q  187 gattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||||||  ||||||||||||| |||||| ||||| |||||||  ||||| |||| |||| ||||||||    
T  8582314 gattttactcaactacttttgtagaattgatataagaaatcgtaaaattacaatcaaaatcgatgaattttacc 8582241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 9212202 - 9212295
Alignment:
Q  276 taaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctatttt 361  Q
    |||||||| ||||| |||||||||| |||||||||||  || ||||||||        |||||||||||||||||||||||||||  |||||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttt 9212295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 17788372 - 17788436
Alignment:
Q  387 ttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||||  |||||| ||||||||| |||||||  |||||||| | ||||||||||||||||    
T  17788372 ttgaaggtgagtaaagtctcaaaatcctagattttaaaatttaagttgcgattttgacaacaatg 17788436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 313
Target Start/End: Original strand, 26574949 - 26575108
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagg------aaattgtaaaatcgcaatcgaaattgatggat 254  Q
    ||||||||||||||||||||| ||||||||||||  ||  | || ||||||||  |||||||      |||| ||||||| |||||| |||| |||||||    
T  26574949 tcgtaaaatcgcaatcaaaattgaaggattttacctaactatttatgtagaattcatataggatagcaaaatcgtaaaatagcaatcaaaatcgatggat 26575048  T
Q  255 tttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
    | |||| ||| ||| || || ||||| ||||||| | ||| | ||||| |||||||||||    
T  26575049 tctaccaaaacaaaattgatgctaaaaatatgttttaaattgaatataatcataaatgac 26575108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 27672303 - 27672347
Alignment:
Q  409 aatcctggattttaggatttaagtcgggattttgacaacaatggt 453  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||    
T  27672303 aatcttggattttagaatttaagtcgggattttggcaacaatggt 27672347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 406 - 449
Target Start/End: Original strand, 9036758 - 9036801
Alignment:
Q  406 caaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||||||||| ||||||||||||||||| || ||||||||||||    
T  9036758 caaaatcctgaattttaggatttaagtcaggtttttgacaacaa 9036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 30240264 - 30240326
Alignment:
Q  223 aaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatat 284  Q
    |||| |||||||||||||| ||||||||||||| |||| ||| |||  |||||||||||||||    
T  30240264 aaatcgtaaaatcgcaatcaaaattgatggattctaccaaaacaaaaataatactaaatatat 30240326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 302; Significance: 1e-169; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 4 - 450
Target Start/End: Complemental strand, 43235322 - 43234868
Alignment:
Q  4 aggatataatgcacctccacatgaaaatcaagcacccatcgccgctgcactttatagctgcaactatccaccatatgtgccgactcaaaaactttgaatc 103  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43235322 aggatataatgcacctccacataaaaatcagccacccatcgccgctgcactttatagctgcaactatccaccatatgtgccgactcaaaaactttgaatc 43235223  T
Q  104 aagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaact 203  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43235222 aaggttgtcaaaattgggactttacttcgagacgaaagggaatagcaaaatcagtactcataaaatcgcaatcaaaatcgaaggattttactcaagaact 43235123  T
Q  204 tttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagt 303  Q
    |||||||||||||||||  ||||||||||||||||||| |||| ||| ||||||||| ||| |   ||||| ||| |||||||||| |||||| |||||     
T  43235122 tttgtagaatcgatataaaaaattgtaaaatcgcaatcaaaatcgattgattttaccaaaagataataatagtaagtatatgttataaatggtttataga 43235023  T
Q  304 cataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg 395  Q
    |||||||||| || || |||||||||||        |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  43235022 cataaatgacttagttgataagaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggtg 43234923  T
Q  396 aagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  43234922 aagaaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 108 - 449
Target Start/End: Complemental strand, 18844065 - 18843716
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||| ||||||||||  | |||||||||||||||||||  | ||||||||||||||||||||||||| || |||||||||||| |||||||    
T  18844065 ttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggacttttg 18843966  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  18843965 tagaatccatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatactaaatatatgttataaatggtatataatcata 18843866  T
Q  308 aatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    |||||| || |||||||||||||        |||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  18843865 aatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtgaaga 18843766  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    ||||| |||||||||| ||| ||||||||||||||| ||||| |||||||    
T  18843765 aagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 110 - 451
Target Start/End: Complemental strand, 19579292 - 19578941
Alignment:
Q  110 gtcaaaatcgggactttacttcgagacgaaagggaata-gcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgt 208  Q
    ||||||||||||| ||||||||  | ||||||||| || |||||||| | |||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  19579292 gtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatcgaaggatttcactcaaggacttttgt 19579193  T
Q  209 agaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc-caaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    ||||||| ||||| ||||||||||||||||||| |||| |||||||||||||  ||||||  |||||| ||||||||||||||||||||| |||||||||    
T  19579192 agaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaataataccaaatatatgttatgaatggtaaatagtcata 19579093  T
Q  308 aatgacctaatttataagaaa--------tcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    |||||| || |||||||||||        |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  19579092 aatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaggtgaaga 19578993  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    || || ||||||||||||||||| ||||||||| || |||||||||||||||    
T  19578992 aaatcgcaaaatcctggattttatgatttaagttggaattttgacaacaatg 19578941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 166 - 449
Target Start/End: Original strand, 23172265 - 23172560
Alignment:
Q  166 aaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaa 265  Q
    |||||| |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  23172265 aaatcgtaatcaaaatcgaagaattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaaa 23172364  T
Q  266 aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataa--------gaaatcgcaatcaaa----atcgatggattttg 353  Q
    || |||||| |||||||||||||  ||||||||||||||||||||||| || |||||||         ||||||| ||||||    ||||||| ||||||    
T  23172365 aaattaatattaaatatatgttacaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttg 23172464  T
Q  354 tctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  23172465 tctattttgggattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 108 - 439
Target Start/End: Original strand, 41688445 - 41688782
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||||||||||||||||   |||||||||||||||||||||  | |||| ||||||||||| |||||||||||||||||||| ||| |||||||    
T  41688445 ttgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttacttaaggacttttg 41688544  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    |||||||||||||| ||||||||||||||||||| |||| |||| |||||| ||||||||  |||||||||||||||||||||||||||||||||| |||    
T  41688545 tagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttta-ccaaaaaaaataatactaaatatatgttatgaatggtatatagttata 41688643  T
Q  308 aatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    |||||  || ||||||||        ||||||||||||||||||||| ||||||  |||||| | ||| ||||||  |||||||||||||||||||||||    
T  41688644 aatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtgaaga 41688743  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggatt 439  Q
    || |  |||||||| | |||||||||||||||| ||||||    
T  41688744 aaattgcaaaatcc-gaattttaggatttaagttgggatt 41688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 110 - 451
Target Start/End: Original strand, 18051314 - 18051660
Alignment:
Q  110 gtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 209  Q
    ||||||||||||| |||||||   | ||||||||||||| |||||  | ||| ||| |||||||||||||||| ||| |||||| | ||| |||||||||    
T  18051314 gtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatcaaagaattttattgaaggacttttgta 18051413  T
Q  210 gaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaa 309  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||| ||| |||||   |||||||||||||||||||| |||  ||||| ||||||||    
T  18051414 gaatcgatataggaaattgtaaaatcgcaagcaaaatcgatggatttaaccaaaaaataataatactaaatatatgttataaat--tatat-gtcataaa 18051510  T
Q  310 tgacctaatttataaga--------aatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaa 401  Q
    |||| || |||||||||        ||||||||||||||||||||||||||| ||||||| | |||||||||| ||||| ||||||||||| ||||||||    
T  18051511 tgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttgaagaaa 18051610  T
Q  402 gtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  18051611 gtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaatg 18051660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 108 - 401
Target Start/End: Complemental strand, 20321293 - 20320992
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||| |||||||||||||  | | ||| ||||||| |||||  | |||| |||||||||||||||||| ||||||||||||| ||| |||||||    
T  20321293 ttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactgaaggacttttg 20321194  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca-aaaaatttaatactaaatatatgttatgaatggtatatagtcat 306  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||    
T  20321193 tagaatctatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccagaaaaaattaatattaaatatatgttataaatgatatatggtcat 20321094  T
Q  307 aaatgacctaatttataag-------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    ||||||| || ||||||||       |||||||||||||| | |||| ||||| |||||||||| ||| |||||||||||| |||| |||||||||||||    
T  20321093 aaatgacttagtttataagaatcgtaaaatcgcaatcaaagttgatgaattttatctattttggaattttactatggattttagtcattgaaggtgaaga 20320994  T
Q  400 aa 401  Q
    ||    
T  20320993 aa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 161 - 454
Target Start/End: Original strand, 21058988 - 21059288
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggatttt-actcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttac 259  Q
    |||||||||||||| |||||||||| |||||| ||| ||  |||||||||||||  ||||| |||||| ||||||||||||| |||| ||||||||||||    
T  21058988 tcgtaaaatcgcaaccaaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcgatggattttac 21059087  T
Q  260 c-caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggatt 350  Q
      |||||||   ||||||||||||||||||| |||||| |||||||||||||||| |  ||||||||||||||        ||||||||||||||| |||    
T  21059088 aacaaaaaaa--aatactaaatatatgttataaatggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatt 21059185  T
Q  351 ttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||| |||||| |||||||||| |||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  21059186 ttgcctatttagggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 21059284  T
Q  451 ggtt 454  Q
    ||||    
T  21059285 ggtt 21059288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 166 - 450
Target Start/End: Original strand, 38158101 - 38158383
Alignment:
Q  166 aaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaa 265  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||| || || |||||||||||||| ||||| |||||||||||||||||| ||||    
T  38158101 aaatcgcaaccaaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggattttaccaaaaa 38158200  T
Q  266 aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtcta 357  Q
    || | |||||||||||||||||||         ||||||||||||||  || ||||||||||||||        ||| ||||||| ||||||||||||||    
T  38158201 aaat-aatactaaatatatgttat---------atagtcataaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattttgtcta 38158290  T
Q  358 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||||||||||||||| ||||||| ||| |||||| || ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||    
T  38158291 ttttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 38158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 103 - 452
Target Start/End: Original strand, 22645501 - 22645850
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||| |||| ||||||||||  | | ||||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||  ||    
T  22645501 caaggttgtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaattgcaatcaaaatcgaaggattttactcaaagac 22645600  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaattt-aatactaaatatatgttatgaatggtatata 301  Q
    || |  |      |||||||||||||||||||| ||||| |||| |||| |||||||| ||||||    || |||||| ||||||||||    |||||||    
T  22645601 ttctaca------atataggaaattgtaaaatcacaatcaaaatcgatgaattttaccaaaaaaaaaacaagactaaacatatgttatg----gtatata 22645690  T
Q  302 gtcataaatgacctaa-tttataagaaat--------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaag 392  Q
    |||||||||||| | | ||||||||||||        |||||||||||| |||||| |||   |||||||||||| |||||||||||||| |||||||||    
T  22645691 gtcataaatgacattagtttataagaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttgaag 22645790  T
Q  393 gtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatgg 452  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  22645791 gtgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaatgg 22645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 108 - 442
Target Start/End: Original strand, 27339966 - 27340307
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||| |||||||||| ||  ||||||||||||||||||    | |||| |||||||||||||||||||||||||||||||| | |||||||    
T  27339966 ttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggacttttg 27340065  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaa--aat-ttaatactaaatatatgttatgaatggtatatagtc 304  Q
    |||||| |||||| |||||  ||||||||||||| |||| ||| ||||||||  ||||  |||  |||||||||||||||||||  |||||||||||||     
T  27340066 tagaattgatataagaaatattaaaatcgcaatcaaaatcgatagattttacaaaaaaataataataatactaaatatatgttacaaatggtatatagt- 27340164  T
Q  305 ataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtga 396  Q
       |||||| || ||||||||        ||||| ||||||||||||||| |||||| |||||||  ||||||||||| ||||| ||||||||||| |||    
T  27340165 ---aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcctattttaagattctactatagatttgagtcgttgaagatga 27340261  T
Q  397 agaaagtcacaaaatcctggattttaggatttaagtcgggattttg 442  Q
    |||||||| ||||||| |  |||||| |||||||||||||||||||    
T  27340262 agaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 136 - 306
Target Start/End: Original strand, 19042235 - 19042404
Alignment:
Q  136 cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatc 235  Q
    ||||||| |||||||||||  | |||||||||||| |||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  19042235 cgaaaggaaatagcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttacttaaggacttttgtagaatcgatataggaaattgtaaaatc 19042334  T
Q  236 gcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcat 306  Q
    |||||| |||||||||||||||| |||||||  ||||||||||||||||||||  ||| ||||||||||||    
T  19042335 gcaatc-aaattgatggattttatccaaaaagattaatactaaatatatgttagaaattgtatatagtcat 19042404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 326 - 450
Target Start/End: Complemental strand, 20923842 - 20923718
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  20923842 aaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagga 20923743  T
Q  426 tttaagtcgggattttgacaacaat 450  Q
    |||||||||||||||||||||||||    
T  20923742 tttaagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 41427774 - 41427654
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||| |||||||||||||| ||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||||| || ||    
T  41427774 caaggttgtcaaaatcgagactttacttcgagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcgaggac 41427675  T
Q  203 ttttgtagaatcgatatagga 223  Q
    |||||||||||||||||||||    
T  41427674 ttttgtagaatcgatatagga 41427654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 15051879 - 15051981
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||||||||||||||| || ||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15051879 tcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 15051978  T
Q  211 aat 213  Q
    |||    
T  15051979 aat 15051981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 43005693 - 43005841
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca 262  Q
    ||||||||||||||||||| ||| ||||||||||||   ||||||||||||||||||||||||| |||||||||||||  |||| |||||||| |||| |    
T  43005693 gtaaaatcgcaatcaaaattgaaagattttactcaacttcttttgtagaatcgatataggaaatcgtaaaatcgcaattaaaatcgatggattgtaccaa 43005792  T
Q  263 aa-aaatttaatactaaatatatgttatgaatggtatatagtcataaat 310  Q
    || |||  |||| ||||||||||||||| ||| ||||| | ||||||||    
T  43005793 aacaaaaataatgctaaatatatgttataaattgtatacactcataaat 43005841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 270 - 401
Target Start/End: Complemental strand, 19979787 - 19979648
Alignment:
Q  270 taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctatttt 361  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||        ||||||||||||||| ||||||||||  | ||||    
T  19979787 taataataaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgtttt 19979688  T
Q  362 gggattctactatggatttaagtcgttgaaggtgaagaaa 401  Q
    |||||||||| ||| |||| ||||||||||| ||||||||    
T  19979687 gggattctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 165 - 313
Target Start/End: Complemental strand, 26021612 - 26021465
Alignment:
Q  165 aaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa 264  Q
    |||||| |||||||||||| ||||||||||||||  |||| ||||  ||||||||| ||||| |||||||| ||||   ||  |||| |||||||| |||    
T  26021612 aaaatcacaatcaaaatcgtaggattttactcaactacttgtgtaacatcgatataagaaatcgtaaaatcacaat--taaacgatgcattttaccaaaa 26021515  T
Q  265 aaat-ttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
     |||  |||| ||||||||||||||| ||| |||||||||||||||||||    
T  26021514 caataataatgctaaatatatgttataaattgtatatagtcataaatgac 26021465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 376 - 448
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  376 gatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
    ||||| ||||||||||||||||||||||||||||||| |  ||||||| |||||||| |||||||||||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 19377953 - 19377841
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||| || | |||||||||  ||  ||||||||||||||||||    | ||||||| |  |||||||||||||||||||||||||||| |||||||    
T  19377953 ttgtcaaagtcagtactttactttaagtggaaagggaatagcaaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttactcaaggacttttg 19377854  T
Q  208 tagaatcgatata 220  Q
    |||||||||||||    
T  19377853 tagaatcgatata 19377841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 22984643 - 22984695
Alignment:
Q  171 gcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  22984643 gcaatcaaaatcgaaggattttactcaaggaattttgtagaatcgatatagga 22984695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 161 - 313
Target Start/End: Complemental strand, 24648306 - 24648161
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||||| |||||||||| |||||||||||||||  |||||||||||||| |||||         |||||||||||| |||| | ||||||||||     
T  24648306 tcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatcaatata--------aaaaatcgcaatcaaaatcggtggattttact 24648215  T
Q  261 caaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
     ||| | |  |||| |||||||||| |||| ||| |||||||||||||||||||    
T  24648214 aaaacataaataatgctaaatatatattataaattgtatatagtcataaatgac 24648161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 13341471 - 13341591
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaatt-agtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaa 201  Q
    |||| ||||||||||||||| ||| |||| |  ||||||||||||| |||||| |  | |||||||||||||| | |||| |||||| ||||||| |  |    
T  13341471 caaggttgtcaaaatcgggattttgcttcaaatcgaaagggaatagaaaaattgaaaaatcgtaaaatcgcaaacgaaattgaagga-tttactcgacta 13341569  T
Q  202 cttttgtagaatcgatatagga 223  Q
    ||||||||||||||||||||||    
T  13341570 cttttgtagaatcgatatagga 13341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 6852340 - 6852417
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaa 180  Q
    |||| |||||||||||||||||| |||||  | |||||||||||||||||||  | |||| |||||| ||||||||||    
T  6852340 caaggttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcgggactcataaaattgcaatcaaaa 6852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 20320990 - 20320926
Alignment:
Q  384 tcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
    ||||||||||||||||||||  ||||||| |  ||||||||||||| || |||||||||||||||    
T  20320990 tcgttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaaca 20320926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 358 - 451
Target Start/End: Original strand, 13342024 - 13342116
Alignment:
Q  358 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||| ||||||| | ||||||||   ||| |||||||||  ||||||| |||||||||||||||  ||||||| ||| ||||||||||||||||    
T  13342024 tttttggattctgcaatggatttggatcgatgaaggtgagtaaagtca-aaaatcctggattttgcgatttaaatcgcgattttgacaacaatg 13342116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 17624898 - 17624837
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagg 222  Q
    |||||||||||||||||||||| || ||||||||||||  ||||||||  |||| |||||||    
T  17624898 tcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgttaaatcaatatagg 17624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 24106714 - 24106645
Alignment:
Q  377 atttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 446  Q
    |||| ||||||||  ||||||||||||  |||||||||| |||||| ||||||| || ||||||||||||    
T  24106714 atttgagtcgttgctggtgaagaaagttgcaaaatcctgaattttatgatttaaatcaggattttgacaa 24106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 41427173 - 41427081
Alignment:
Q  361 tgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggt 453  Q
    ||||||||| |||||||||| ||||||||||| |    |||||  ||||| |||||||||| ||| | |||||| |||||||||||| |||||    
T  41427173 tgggattctgctatggatttgagtcgttgaagctacgcaaagttgcaaaaacctggattttgggactgaagtcgcgattttgacaaccatggt 41427081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 30799682 - 30799635
Alignment:
Q  173 aatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 220  Q
    |||| ||||||||||||||||| |||  ||||||||||||||||||||    
T  30799682 aatcgaaatcgaaggattttacacaactacttttgtagaatcgatata 30799635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 13350122 - 13350188
Alignment:
Q  383 gtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||| |||||||||  |||||  ||||||| |||||||| |||||||||| | ||||||||||||||    
T  13350122 gtcgatgaaggtgagtaaagttgcaaaatcttggattttgggatttaagttgtgattttgacaacaa 13350188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 15446506 - 15446450
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 220  Q
    ||||||| ||||| ||| |||||||||||| || |  ||||||||||||||||||||    
T  15446506 taaaatcacaatcgaaaccgaaggattttagtcgactacttttgtagaatcgatata 15446450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 30804213 - 30804169
Alignment:
Q  179 aatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    ||||||| ||||||||| ||  |||||||||||||||||||||||    
T  30804213 aatcgaatgattttactaaactacttttgtagaatcgatatagga 30804169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 111 - 450
Target Start/End: Original strand, 15527892 - 15528239
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||  |||||||||||  | ||||||| |||||||||||  | ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  15527892 tcaaaatcctgactttacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 15527991  T
Q  211 aatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaat 310  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  15527992 aatcgatataggaaattgtaaaatcgcaatcgaaatcgatggatttcccccaaaaaatttaatactaaatatatgttataaatggtatatagttataaat 15528091  T
Q  311 gacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaag 402  Q
    ||| || ||||||||        ||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||||||||||    
T  15528092 gacttagtttataagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaagattctactatgaatttaagtcgttaaaggtgaagaaag 15528191  T
Q  403 tcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||    
T  15528192 tcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 103 - 451
Target Start/End: Complemental strand, 17103550 - 17103201
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||||||||||||||| || |||||||||||| |||||| || |||||||||||||||||||| | |||||||||||||||||| ||    
T  17103550 caaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactcaaggac 17103451  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||| || |||| |||||||    
T  17103450 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacctaaaaaaattaataataaatatatgtcataaatgatatatag 17103351  T
Q  303 tcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    || ||||| || || ||||||||||        |||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||    
T  17103350 tcgtaaataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaagt 17103251  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
           ||| |||||||||| |||||| ||||||||||||||||||||||||||||    
T  17103250 -------gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaatg 17103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 108 - 450
Target Start/End: Original strand, 26053075 - 26053425
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||| ||||||||||||  | ||||||| |||||||||||| | |||||||||||| |||||||||||||| ||||||||||||  |||||||    
T  26053075 ttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttg 26053174  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||||   ||||||||| |||||||||| |||||||||||||||||    
T  26053175 tagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcata 26053274  T
Q  308 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    ||| || || ||||||||||||||        |||||||||| |||||||||||  ||||||||||||||| |||| |||| |||| |||||||||||||    
T  26053275 aataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaaga 26053374  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  26053375 aagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 108 - 450
Target Start/End: Original strand, 26073128 - 26073478
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||| ||||||||||||  | ||||||| |||||||||||| | |||||||||||| |||||||||||||| ||||||||||||  |||||||    
T  26073128 ttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttg 26073227  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||||   ||||||||| |||||||||| |||||||||||||||||    
T  26073228 tagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcata 26073327  T
Q  308 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    ||| || || ||||||||||||||        |||||||||| |||||||||||  ||||||||||||||| |||| |||| |||| |||||||||||||    
T  26073328 aataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaaga 26073427  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  26073428 aagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 101 - 451
Target Start/End: Complemental strand, 7223872 - 7223518
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaga 200  Q
    |||||| ||||||||||||||||||||||||  | |||||||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||     
T  7223872 atcaaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaagg 7223773  T
Q  201 acttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatacta----aatatatgttatgaatggt 296  Q
    |||||||||||||||||||||||||||||||||||||||||  |||  |||||||||| ||||| ||  ||||||||    |||||||||||| ||||||    
T  7223772 acttttgtagaatcgatataggaaattgtaaaatcgcaatcagaatcaatggatttta-ccaaacaaaataatactaaattaatatatgttataaatggt 7223674  T
Q  297 atatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgtt 388  Q
    ||||||||||||||||| || ||||||||        ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||         
T  7223673 atatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattctactatggatttaag----- 7223579  T
Q  389 gaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
      |||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  7223578 --aggtgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 103 - 453
Target Start/End: Complemental strand, 19748688 - 19748330
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||||||||||| |||  |  ||||||||||||||||||  | | ||||||||||||||||||||||||||||||||||||||| ||    
T  19748688 caaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 19748589  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||   ||||||||||||||| |||| |||| |||||||    
T  19748588 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccagaaaataataatactaaatatattttataaatgatatatag 19748489  T
Q  303 tcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    || |||||||| || ||||||||||||||        ||||||||||||||| |||||| |||||||  |||||||||| |||||| |||| || |||||    
T  19748488 tcttaaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggt 19748389  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggt 453  Q
    ||||||| || |||||||||||||| || |||||||||||||||||||| |||||||||    
T  19748388 gaagaaaatctcaaaatcctggattgtaagatttaagtcgggattttgaaaacaatggt 19748330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 101 - 451
Target Start/End: Original strand, 27233071 - 27233407
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaga 200  Q
    |||||| |||||||||||| | |||||||||  | | |||||||||  ||||||  | |||| |||||||||||||||||| |||||||||||||||||     
T  27233071 atcaaggttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcaagg 27233170  T
Q  201 acttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatat 300  Q
     |||| ||||||||| ||||| ||||||||||||||||||| |||| ||| |||||||||  ||||   |||||||||||||||||||| ||||||||||    
T  27233171 tctttagtagaatcgctatagaaaattgtaaaatcgcaatcaaaatcgatagattttaccataaaacaataatactaaatatatgttataaatggtatat 27233270  T
Q  301 agtcataaatgacctaatttataagaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaa 400  Q
    |   | |||| |         |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27233271 a---agaaatca---------taa--aatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaa 27233356  T
Q  401 agtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  27233357 agtcacaaaatcctggattttaggatttaagtcggtagtttgacaacaatg 27233407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 103 - 451
Target Start/End: Original strand, 17543504 - 17543870
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||| ||||| |||||||||||||  | ||||| |||||||||||||  | |||| |||||||| ||||||||||||||||||||||||||| ||    
T  17543504 caaggttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttactcaaggac 17543603  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc---------caaaaaat-ttaatactaaatatatgttatgaa 292  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||          |||||||  |||||||||||||||||||| ||    
T  17543604 ttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaataaaaaaaaaataataatactaaatatatgttataaa 17543703  T
Q  293 tggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagt 384  Q
    |||||||||||| |||||||| || ||||||||        ||||||||||||||||| || |||||||  ||||||  ||||||||||||||||| |||    
T  17543704 tggtatatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagattttgcttattttaagattctactatggatttgagt 17543803  T
Q  385 cgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||| ||||| |||||| |||||||||| |||||||||||||||||| ||||||||||||||||    
T  17543804 cgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaatg 17543870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 103 - 451
Target Start/End: Complemental strand, 23898165 - 23897810
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||||||| ||| ||||  | |||| | ||| ||||||||    | ||||||||||| || |||||||||||||||||||||||  ||    
T  23898165 caagattgtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac 23898066  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    ||| |||||||||||||| |||||||||||||| ||||| |||| ||||||||||||| ||||||   ||||||||||||||||||| ||||||||||||    
T  23898065 ttt-gtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggattttaccaaaaaaaaaaaatactaaatatatgttataaatggtatatag 23897967  T
Q  303 tcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    ||||||||||| || ||||||||||        |||||||||||||||||||||||| | ||||||| | ||| |||||||||||| |||||||||| ||    
T  23897966 tcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacgt 23897867  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||| |||||||||| |||||||||||||||||||||| ||  ||||||||    
T  23897866 gaagaaagtcgcaaaatcctgcattttaggatttaagtcgggatcttatcaacaatg 23897810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 103 - 451
Target Start/End: Original strand, 11327336 - 11327701
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||||| |||||||||  |  ||||||||||||||||||    |||||||||||||||||||||||||||| |||||||||||| ||    
T  11327336 caaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggac 11327435  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt--------taat-actaaatatatgttatgaat 293  Q
    ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| |||||| |        |||| | |||||| |||| || |||    
T  11327436 ttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttaccaaaaaaaataaaataaataataaataaatacatgtgataaat 11327535  T
Q  294 ggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtc 385  Q
    |||||| ||||||||||||  || || |||||        |||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  11327536 ggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtc 11327635  T
Q  386 gttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
     |||||| ||||||||  | ||||| | ||||||||||| ||||||||||||||||||||||||||    
T  11327636 cttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 11327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 111 - 450
Target Start/End: Complemental strand, 17250404 - 17250057
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatc--gaaggattttactcaagaacttttgt 208  Q
    |||||||||||||||||||||  | ||||||| ||| || || || | |||||||||||||||||||||||   |||||||||||||||||  |||| ||    
T  17250404 tcaaaatcgggactttacttcaggtcgaaaggaaatggcgaa-ttgggactcgtaaaatcgcaatcaaaataaagaaggattttactcaaggtctttagt 17250306  T
Q  209 agaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataa 308  Q
    |||||||  |||| |||||||||| |||||||| ||||  |||||||||||| |||||   || || ||||||||| |||| |||  |||||||||||||    
T  17250305 agaatcgccatagaaaattgtaaattcgcaatcaaaatcaatggattttaccaaaaaacaatagtaataaatatatattataaatt-tatatagtcataa 17250207  T
Q  309 atgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaa 400  Q
    ||||| || ||||||||||||||        ||||||||||| ||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  17250206 atgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaa 17250107  T
Q  401 agtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  17250106 agttgcaaaatcctggattttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 103 - 324
Target Start/End: Original strand, 7918124 - 7918343
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||||| |||||||||  | ||||||||||||||| ||| || ||||||||||| |||||||||||||||| |||||||||||| ||    
T  7918124 caaggttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttactcaaggac 7918223  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    |||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| ||||||  ||||||||||| |||||||| |||| |||||||    
T  7918224 ttttgtagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaa--taatactaaatttatgttataaatgatatatag 7918321  T
Q  303 tcataaatgacctaatttataa 324  Q
    ||||||||||| ||||||||||    
T  7918322 tcataaatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 108 - 451
Target Start/End: Original strand, 30912185 - 30912542
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||| | ||| ||||  |  ||||| ||||||||||||   || |||||||||| ||| |||||| ||||||||||| ||||  |||||||    
T  30912185 ttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaattgaaggattttattcaactacttttg 30912284  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttac-----cca-aaaaatttaatactaaatatatgttatgaatggtatata 301  Q
    || |||||||||| |||||  || ||||||||||  ||| ||||||||||||     ||| |||||  ||||||||||||||||| || |||| ||||||    
T  30912285 taaaatcgatataagaaatcatagaatcgcaatcataatcgatggattttacttttaccacaaaaaaataatactaaatatatgtgataaatgatatata 30912384  T
Q  302 gtcataaatgacctaatttataagaaat--------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaagg 393  Q
     ||||||||||| || ||||||||||||        ||||||||||||| |||||||||| |||||||| ||||||| ||||||||| ||||||||||||    
T  30912385 atcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtgattctattatggatttgagtcgttgaagg 30912484  T
Q  394 tgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||||    
T  30912485 tgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 30912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 228 - 454
Target Start/End: Complemental strand, 21354970 - 21354744
Alignment:
Q  228 gtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa 327  Q
    |||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||||    
T  21354970 gtaaaatcgcaatcaaaatcgatggatttcacccaaataatttaatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaa 21354871  T
Q  328 --------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggatt 419  Q
            |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||        ||| |||||    
T  21354870 atcgtaaaatcgcaataaaaaacgatggattttgtctattttgggattctaccatggatttaagtcgttgaaggtaaagaaag--------tccaggatt 21354779  T
Q  420 ttaggatttaagtcgggattttgacaacaatggtt 454  Q
    ||||||||||||| |||||||||||||||||||||    
T  21354778 ttaggatttaagttgggattttgacaacaatggtt 21354744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 103 - 267
Target Start/End: Original strand, 22498214 - 22498378
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||| |||||||||||||  | |||||||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||||  ||    
T  22498214 caaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagac 22498313  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaa 267  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  22498314 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaa 22498378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 201 - 454
Target Start/End: Original strand, 10508889 - 10509156
Alignment:
Q  201 acttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt-taatactaaatatatgttatgaatg----- 294  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| | ||| |||  ||||| |||||||||||||| ||||         
T  10508889 acttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaattgatggattttatcaaaataataataataataaatatatgttataaatgactta 10508988  T
Q  295 -gtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtc 385  Q
     ||||||||| ||||||||| || ||||||| ||        |||| |||||||||||||| |||||| ||||||||||||||||||||  |||| ||||    
T  10508989 ggtatatagt-ataaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtc 10509087  T
Q  386 gttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 454  Q
     ||||| ||||||||||||||||| | ||| ||||||||||||||||| |||||||||||| |||||||    
T  10509088 attgaatgtgaagaaagtcacaaatttctgaattttaggatttaagtctggattttgacaataatggtt 10509156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 6943465 - 6943590
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  6943465 aaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagga 6943564  T
Q  426 tttaagtcgggattttgacaacaatg 451  Q
    ||||||||||||||||||||||||||    
T  6943565 tttaagtcgggattttgacaacaatg 6943590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 286 - 450
Target Start/End: Original strand, 7918338 - 7918510
Alignment:
Q  286 ttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaa--------tcaaaatcgatggattttgtctattttgggattctactatgga 377  Q
    |||| |||| |||||||||||||||||| |||||||||| |||||||||        ||||||||||| |||||||  ||| || ||||| |||||||||    
T  7918338 ttataaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatgga 7918437  T
Q  378 tttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  7918438 tttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 3573678 - 3573831
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaa-gggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaactttt 206  Q
    ||||||||||||||||||||||||  | ||||| |||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||  ||| ||    
T  3573678 ttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaactactctt 3573777  T
Q  207 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||| |||||| |||||||||||||||||||| |||| ||||  |||||||    
T  3573778 gtagaatagatataagaaattgtaaaatcgcaatcaaaatcgatgagttttacc 3573831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 292 - 442
Target Start/End: Original strand, 22498848 - 22499006
Alignment:
Q  292 atggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaag 383  Q
    |||||||||||||||||||||| |  ||||||||||||||        |||| |||||||||||||||||||||||||| |||| |||||||||||| ||    
T  22498848 atggtatatagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgag 22498947  T
Q  384 tcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttg 442  Q
    ||||| ||||||||||||||| ||||||  |||| |||||||||| ||| |||||||||    
T  22498948 tcgttcaaggtgaagaaagtcgcaaaattgtggaatttaggattttagttgggattttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 27890743 - 27890621
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaga 200  Q
    |||||| |||||||| ||| ||||||||||| ||  |||||||| ||| |||||| | ||||||||||||| ||||||||| |||||||||||||||||     
T  27890743 atcaaggttgtcaaattcgagactttacttcaagttgaaagggagtagtaaaattggaactcgtaaaatcgtaatcaaaattgaaggattttactcaagg 27890644  T
Q  201 acttttgtagaatcgatatagga 223  Q
    |||||||||||||||||||||||    
T  27890643 acttttgtagaatcgatatagga 27890621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 347 - 453
Target Start/End: Original strand, 18491063 - 18491169
Alignment:
Q  347 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 446  Q
    |||||||||  |||||||||||| |||||||||| |||||||||||||||| ||||   |||||| |||||||||||||||||||||||||||||||||     
T  18491063 gattttgtcagttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacag 18491162  T
Q  447 caatggt 453  Q
    |||||||    
T  18491163 caatggt 18491169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 161 - 447
Target Start/End: Original strand, 2912093 - 2912373
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||||  |||| |||| ||||||||||||||||  ||||||||||||| | |||| |||||||||||||||||||| |||| || |||||||||     
T  2912093 tcgtaaaatcataatcgaaattgaaggattttactcaactacttttgtagaattgttataagaaattgtaaaatcgcaatcaaaatcgacggattttaca 2912192  T
Q  261 caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggatttt 352  Q
     |||||| | |||||||  || |||| ||           ||||||||||||| |  ||||||| ||||||        ||||||||||||||| |||||    
T  2912193 taaaaaaat-aatactag-tacatgtcat-----------agtcataaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaatttt 2912279  T
Q  353 gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 447  Q
    |  ||||||  |||||||||||| |||| | ||||||||| || |||||||  |||||||||  |||||| ||||||||||||||||||||||||    
T  2912280 gcttattttaagattctactatg-atttgaatcgttgaagatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 27614435 - 27614562
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||  ||| ||||||||  | ||||||||||||| |||||  | |||||||||||| |||||||||||||||||||||||||||  ||||  |    
T  27614435 ttgtcaaaattaggaatttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatcacaatcaaaatcgaaggattttactcaatgacttgag 27614534  T
Q  208 tagaatcgatataggaaattgtaaaatc 235  Q
    ||||| | ||||||||||||||||||||    
T  27614535 tagaaacaatataggaaattgtaaaatc 27614562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 165 - 260
Target Start/End: Original strand, 4841665 - 4841760
Alignment:
Q  165 aaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||| ||||||||||| |||||||||||||||  |||||||||||||||  ||| ||||| |||||||||||||| |||| |||| ||||||||    
T  4841665 aaaatcacaatcaaaatcaaaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtattttacc 4841760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 371 - 453
Target Start/End: Original strand, 5422798 - 5422880
Alignment:
Q  371 ctatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggt 453  Q
    |||| ||||| |||||||||||||||| |||||  ||||||| || ||||||| |||||||||||||||||||||||||||||    
T  5422798 ctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaatggt 5422880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 21355032 - 21354942
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattt 191  Q
    |||||| |||||||||| |||| |||||||| ||  |||||||||||| ||||| || |||||||||||||||||||||||||| ||||||    
T  21355032 atcaaggttgtcaaaattgggattttacttcaagttgaaagggaatagaaaaatcaggactcgtaaaatcgcaatcaaaatcgatggattt 21354942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 373 - 448
Target Start/End: Original strand, 3573984 - 3574059
Alignment:
Q  373 atggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
    |||||||| ||||||||||||||||||||||| | |||| ||||||||||| ||||||||||| ||||||| ||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 31108504 - 31108390
Alignment:
Q  109 tgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgt 208  Q
    |||||||||| ||||||||||||  | |||||||||||||||||||    | |||||||| ||||||||||||| || ||||||||| ||| ||||||||    
T  31108504 tgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaaccgcaatcaaaatcaaaagattttactaaaggacttttgt 31108405  T
Q  209 agaatcgatatagga 223  Q
    | ||| ||| |||||    
T  31108404 acaatagatgtagga 31108390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 33583445 - 33583557
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtac-tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaactttt 206  Q
    ||||||||||||||| ||||||||  | ||||||||  |||||| | | |||  ||||||||||  |||||||||||||| |||||||| ||| ||||||    
T  33583445 ttgtcaaaatcgggattttacttccggtcgaaaggggttagcaataatcgtaaatcgtaaaatcaaaatcaaaatcgaag-attttacttaaggactttt 33583543  T
Q  207 gtagaatcgatata 220  Q
    ||||||||||||||    
T  33583544 gtagaatcgatata 33583557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 447
Target Start/End: Original strand, 33583766 - 33583855
Alignment:
Q  358 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 447  Q
    ||||||| |||| |||||||||| ||||||||||| | |  ||||||  ||||||||||||||| ||| |||||||| ||||||||||||    
T  33583766 ttttgggtttctgctatggatttgagtcgttgaagctaattaaagtctaaaaatcctggattttgggacttaagtcgcgattttgacaac 33583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 223
Target Start/End: Original strand, 33592924 - 33593044
Alignment:
Q  102 tcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaa 201  Q
    ||||| ||||||||||||||| ||| ||||    |||||||||||| |||||||   | ||||||||| |||||| |||||||| || |||||||||  |    
T  33592924 tcaagattgtcaaaatcgggattttgcttcatatcgaaagggaataacaaaattgaaaatcgtaaaattgcaatcgaaatcgaatga-tttactcaacta 33593022  T
Q  202 cttttgtagaatcgatatagga 223  Q
    |||||||||||| |||||||||    
T  33593023 cttttgtagaattgatatagga 33593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 348 - 430
Target Start/End: Original strand, 4841946 - 4842026
Alignment:
Q  348 attttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaa 430  Q
    |||||| ||||| ||||||||| ||| |||||| |||||||||||||||| |||||| ||||||||   ||||||||||||||    
T  4841946 attttgcctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaatcc--aattttaggatttaa 4842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 8275366 - 8275415
Alignment:
Q  165 aaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatc 214  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  8275366 aaaatcgcaattaaaatcgaaggattttactcaaggacttttgtaaaatc 8275415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 10958239 - 10958320
Alignment:
Q  373 atggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 454  Q
    |||||||| | || ||||||||||   ||||| |||||||||| |||||  ||||||||||| |||||||||||||||||||    
T  10958239 atggatttgaatccttgaaggtgagtcaagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaacaatggtt 10958320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 423
Target Start/End: Original strand, 18490910 - 18490987
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttag 423  Q
    ||||||||||  |||||||||| | |||||| ||| |||||||||||||||| |||||  |||||| |||||||||||    
T  18490910 ggattttgtcatttttgggattatgctatgggtttcagtcgttgaaggtgaataaagttgcaaaatgctggattttag 18490987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 20432425 - 20432486
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagg 222  Q
    ||||||||||||||||||||| |||| |||||||| ||  | ||||||||||||||||||||    
T  20432425 tcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgatatagg 20432486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 441
Target Start/End: Original strand, 8285760 - 8285843
Alignment:
Q  358 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggatttt 441  Q
    |||||||||| | || ||||||| ||||||||||| |  |  ||||| |||||||||||||||||||| |||||||| ||||||    
T  8285760 ttttgggattttgctgtggatttgagtcgttgaagctagatcaagtcgcaaaatcctggattttaggacttaagtcgcgatttt 8285843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 4596661 - 4596747
Alignment:
Q  137 gaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    |||||||| ||||||||| |  | | ||||||| ||||||||||| |||||||| |||||||  |||||| |||||| |||||||||    
T  4596661 gaaagggagtagcaaaataaaaaattgtaaaattgcaatcaaaattgaaggattctactcaattacttttctagaattgatatagga 4596747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 358 - 423
Target Start/End: Original strand, 18490998 - 18491063
Alignment:
Q  358 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttag 423  Q
    |||| ||||||| |||||||||| |||| ||||||||||| |||||  |||||| |||||||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggattttag 18491063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 375 - 443
Target Start/End: Original strand, 8545019 - 8545087
Alignment:
Q  375 ggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttga 443  Q
    |||||||| | |||||| ||||  |||||| |||||||||  |||||||||||||| ||||||||||||    
T  8545019 ggatttaaattgttgaaagtgagtaaagtcgcaaaatcctaaattttaggatttaaatcgggattttga 8545087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 1179119 - 1179068
Alignment:
Q  164 taaaatcgcaatcaaaatc-gaaggattttactcaagaacttttgtagaatc 214  Q
    |||| |||||||||||||| ||||||||||||||||  ||||||||||||||    
T  1179119 taaagtcgcaatcaaaatctgaaggattttactcaactacttttgtagaatc 1179068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 27890621 - 27890582
Alignment:
Q  145 atagcaaaattagtactcgtaaaatcgcaatcaaaatcga 184  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  27890621 atagcaaaatcaggactcgtaaaatcgcaatcaaaatcga 27890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 5422601 - 5422645
Alignment:
Q  270 taatactaaatatatgttatgaatggtatatagtcataaatgacc 314  Q
    |||| ||||||||||||||| |||  |||||||||||||||||||    
T  5422601 taatgctaaatatatgttataaattatatatagtcataaatgacc 5422645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 346 - 453
Target Start/End: Complemental strand, 27890238 - 27890131
Alignment:
Q  346 ggattttgtctatttt-gggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgac 444  Q
    ||||||||||| |||| ||||||||  ||||||||| ||||||| ||| |  | |||||| ||||| |||| ||||| ||| |||||||  |||||||||    
T  27890238 ggattttgtctgtttttgggattctgatatggatttgagtcgttaaagctacacaaagtcgcaaaaacctgaattttgggacttaagtc-agattttgac 27890140  T
Q  445 aacaatggt 453  Q
    ||| |||||    
T  27890139 aaccatggt 27890131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 102 - 450
Target Start/End: Complemental strand, 9770468 - 9770112
Alignment:
Q  102 tcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaa 201  Q
    ||||| |||||||||||||||||||||||   | |||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||      
T  9770468 tcaaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggt 9770369  T
Q  202 cttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatata 301  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9770368 cttttgtagaatcgatatagcaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttatgaatggtatata 9770269  T
Q  302 gtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaagg 393  Q
    ||||||| | || || ||||||||||        |||||||||||||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  9770268 gtcataagtaacttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattttgtctattttaggattctactatggatttgagtcgttgaagg 9770169  T
Q  394 tgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||| |||||||||||||||| |||||||| |||||||||| |||||| ||||||||    
T  9770168 tgaaaaaagtcacaaaatcctagattttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 109 - 450
Target Start/End: Original strand, 9911191 - 9911541
Alignment:
Q  109 tgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgt 208  Q
    |||||||||  ||||||||||||    ||||||||||||| |||||  | ||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  9911191 tgtcaaaattaggactttacttcatatcgaaagggaatagtaaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttactcgagaacttttgt 9911290  T
Q  209 agaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataa 308  Q
    |||||||||||| |||||||||||||||||||| |||| |||||| |||||| |||||   ||||||| |||||||||||| ||||||||||||||||||    
T  9911291 agaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatacttaatatatgttataaatggtatatagtcataa 9911390  T
Q  309 atgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaa 400  Q
    ||||| || ||||||||        |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| | ||||||||||||||||    
T  9911391 atgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaagaa 9911490  T
Q  401 agtcacaaaatcctggattttagga-tttaagtcgggattttgacaacaat 450  Q
    |||  ||||||| || ||||||||| ||||| ||||||||| |||||||||    
T  9911491 agttgcaaaatcttgaattttaggattttaaatcgggatttagacaacaat 9911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 108 - 451
Target Start/End: Complemental strand, 36121173 - 36120823
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||||||| ||||||||| ||  |||||||||||||  |||  | ||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  36121173 ttgtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcggaatcaaaatcgaaagattttactcaaggacttttg 36121074  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    ||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||   ||||||||||||||| |||| |||||||||||||||||    
T  36121073 tagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttta-ccaaaaataataatactaaatatattttataaatggtatatagtcata 36120975  T
Q  308 aatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    |||||| || | ||||||        ||||||||||||||||||||| ||||||  |||||| | ||| || ||||||||||||||||||||||||||||    
T  36120974 aatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtgaaga 36120875  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    || || |||||||||  ||||||  |||||| |||| |||||||||||||||    
T  36120874 aaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaacaatg 36120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 103 - 448
Target Start/End: Complemental strand, 5376020 - 5375666
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||| |||||||||||||  | | |||   ||||| |||||  | ||||||||||||||||||||||||||||||||||||||||| ||    
T  5376020 caaggttgtcaaaattgggactttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 5375921  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa-aaaatttaatactaaatatatgttatgaatggtatata 301  Q
    || ||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||| |||| ||||||||||||||||||||| |||| |||||     
T  5375920 ttctgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataaatgatatatg 5375821  T
Q  302 gtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaagg 393  Q
    |||||||||||| || ||||||||        |||||||||||||| |||||| ||||||||||||||   |||||| |||| |||| ||||||||||||    
T  5375820 gtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctattttaaaattctattatgaattttagtcgttgaagg 5375721  T
Q  394 tgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
    ||||||||||| ||||||| |  ||||||| ||||| || |||||||||||||||    
T  5375720 tgaagaaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 161 - 451
Target Start/End: Original strand, 5361797 - 5362093
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||| |||| |||||||||||| ||||||||||  |||||||||||||||||||| ||||| |||||||||||||| || | ||||||||| |||    
T  5361797 tcgtaaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaatcgtaaaatcgcaatcaaagtcgatggatttgacc 5361896  T
Q  261 caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggatttt 352  Q
     ||| ||   ||||||||||||||||||  ||||||||||| ||||||||||| || ||||||||||||||        |||||||||||||||| ||||    
T  5361897 aaaagaaa--aatactaaatatatgttaaaaatggtatataatcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaatcgatgggtttt 5361994  T
Q  353 gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    | ||||||||| |||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  5361995 gcctattttggaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatg 5362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 108 - 451
Target Start/End: Original strand, 23064740 - 23065093
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||||||||||||||  | |||||||||||| | ||||  | ||||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  23064740 ttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttattcaaggacttttg 23064839  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    ||||||||||||||||||||||||||| |||||| |||| ||  ||||||||| |||||   |||||||||||||||||||| |||| ||||  ||||||    
T  23064840 tagaatcgatataggaaattgtaaaattgcaatcaaaatcgaatgattttaccaaaaaataataatactaaatatatgttataaatgatatagggtcata 23064939  T
Q  308 aatgac--ctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaa 397  Q
    ||||||   || |||||||||||||        ||||| |||||||||||||||   ||||||| | ||||||| |||||||| |||||||||| |||||    
T  23064940 aatgacttatagtttataagaaatcgtaaaattgcaattaaaatcgatggatttgacctattttagaattctacaatggatttgagtcgttgaatgtgaa 23065039  T
Q  398 gaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||| ||||||| ||||||||||| |||||||||||| |||| |||||||||    
T  23065040 gaaagttacaaaatactggattttagaatttaagtcggggttttaacaacaatg 23065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 145 - 451
Target Start/End: Complemental strand, 10143213 - 10142898
Alignment:
Q  145 atagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaa 244  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||||| ||||  | |||||||||||||||||| || ||||||||||||||||| ||    
T  10143213 atagcaaaattaacaatcgtaaaatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaa 10143114  T
Q  245 attgatggatttta-cccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caat 335  Q
    |||||||||||||| |  ||||||  ||||||||||||||| |||| | ||||||||||||||||||||| | |||||||||||||||        ||||    
T  10143113 attgatggattttatcaaaaaaaaaataatactaaatatatattataattggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaat 10143014  T
Q  336 caaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgg 435  Q
    |||||||||||||||||||||||||||| ||| ||||||||| || |||| ||||||||| |||||||| ||||||  |  ||||||| |||||||||||    
T  10143013 caaaatcgatggattttgtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgg 10142914  T
Q  436 gattttgacaacaatg 451  Q
    |||||| |||||||||    
T  10142913 gattttcacaacaatg 10142898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 163 - 455
Target Start/End: Complemental strand, 8889512 - 8889223
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca 262  Q
    |||||||||||| |||||||||||||| ||||||||  |||||||||||||         ||||||||||||||||||| |||| |||| |||||||| |    
T  8889512 gtaaaatcgcaaccaaaatcgaaggatcttactcaactacttttgtagaat---------aaattgtaaaatcgcaatcaaaatcgatgaattttaccaa 8889422  T
Q  263 aaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgt 354  Q
     ||||   |||||||||||||| |||| ||||||||||||||||||| ||| |  ||||||||||||||        ||||||||||||||| ||||||     
T  8889421 caaaaa--aatactaaatatatattataaatggtatatagtcataaacgacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgc 8889324  T
Q  355 ctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 454  Q
    |||||||||||||||| |||| |||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8889323 ctattttgggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctggattttaggatttaagtcgggattttgacatcaatggtt 8889224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 161 - 449
Target Start/End: Complemental strand, 17466376 - 17466080
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||| |||| |||||| ||| |||| |||||||  |||||||| ||||||||||| ||||||||||||| |||||| |||| ||||||||||||     
T  17466376 tcgtaaaattgcaaacaaaattgaaagattatactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaatcgatggattttaca 17466277  T
Q  261 caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggatttt 352  Q
      |||||  ||||| |||||||||||||| ||||||||||||||||||||||| || ||||| ||        ||||||||||| |||||||||||||||    
T  17466276 acaaaaaaataatattaaatatatgttataaatggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaatctaaatcgatggatttt 17466177  T
Q  353 gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |  |||||| |||||||| ||||||||| |||| || ||| |||||||| || |||||||||  |||||| ||||||||| || |||||||||||||    
T  17466176 gcttattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 113 - 451
Target Start/End: Complemental strand, 13023903 - 13023566
Alignment:
Q  113 aaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaa 212  Q
    ||||| ||||||||||||| || |||||| ||||||||||||  | |||||||||||| ||||||| || ||| |||||||| |||| | ||||||| ||    
T  13023903 aaaattgggactttacttcaagtcgaaagagaatagcaaaatcggaactcgtaaaatcacaatcaagatagaatgattttacccaaggaattttgtaaaa 13023804  T
Q  213 tcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatga 312  Q
    ||||||||||||||| |||||||| || | |     |            |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  13023803 tcgatataggaaattttaaaatcgtaacctaccgaaa------------aaaaaaattaatactaaatatatgttataaatggtatatagtcataaatga 13023716  T
Q  313 cctaatttataagaaatcg--------caatcaaaatcgatggattttgtctatttt--gggattctactatggatttaagtcgttgaaggtgaagaaag 402  Q
    | || ||||||| ||||||        |||||||||||||| |||||| ||||||||  ||||||||||||||||||| |||| ||||||||||||||||    
T  13023715 cttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttgggattctactatggatttgagtcattgaaggtgaagaaag 13023616  T
Q  403 tcacaaaatcctgga-ttttaggatttaagtcgggattttgacaacaatg 451  Q
    || |||||||||  | ||||||||||||||| ||||||||||||||||||    
T  13023615 tcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaatg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 139 - 312
Target Start/End: Original strand, 8010946 - 8011120
Alignment:
Q  139 aagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgca 238  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||  | |||| ||||||||||||| |||||||||||||||||    
T  8010946 aagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactatttttatagaatcgatataagaaattgtaaaatcgca 8011045  T
Q  239 atcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatga 312  Q
    ||| |||| |||| |||||||| ||| |||  |||| ||||||||||||||| ||| ||||||| | ||||||||    
T  8011046 atcaaaatcgatgtattttaccaaaacaaaaataatgctaaatatatgttataaattgtatataattataaatga 8011120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 326 - 450
Target Start/End: Original strand, 8011221 - 8011345
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    ||||||||||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  8011221 aaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagga 8011320  T
Q  426 tttaagtcgggattttgacaacaat 450  Q
    ||| ||| |||||||||||||||||    
T  8011321 tttgagttgggattttgacaacaat 8011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 161 - 451
Target Start/End: Complemental strand, 37240536 - 37240261
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatat-aggaaattgtaaaatcgcaatcgaaattgatggattttac 259  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||| ||||| ||||                 
T  37240536 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatataaagaaatcgtaaaatcacaatcaaaat------------- 37240450  T
Q  260 ccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattt 351  Q
      | ||    |||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||        ||||||||||||||||||||| |||     
T  37240449 --ataa----taatactaaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaatta 37240356  T
Q  352 tgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    || |||||||||| ||||||||||||||| |||||||||||||||| ||||||  ||    ||  |||||||||||||||| |||||||| |||||||||    
T  37240355 tgcctattttggg-ttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggattttaacaacaatg 37240261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 13551627 - 13551752
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    |||||||||| ||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||| |||||| |||||||||  |||||||||    
T  13551627 aaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttagga 13551726  T
Q  426 tttaagtcgggattttgacaacaatg 451  Q
    | ||||||| ||||||||||||||||    
T  13551727 tataagtcgagattttgacaacaatg 13551752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 103 - 313
Target Start/End: Original strand, 6346729 - 6346940
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||||| | ||| ||||  | |||||||||| ||||||||    | |||||||||| |||||||||||||||||||||||||||  ||    
T  6346729 caaggttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttactcaactac 6346828  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatata 301  Q
    |||||||||||  ||||| |||||||||||||||||||| |||| ||||||||| ||| ||| |||  ||||  |||||||||||||| ||| |||||||    
T  6346829 ttttgtagaatgaatataagaaattgtaaaatcgcaatcaaaatcgatggatttcaccaaaacaaaaataatgataaatatatgttataaattgtatata 6346928  T
Q  302 gtcataaatgac 313  Q
      ||||||||||    
T  6346929 tgcataaatgac 6346940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 55476345 - 55476226
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaga 200  Q
    |||||| || ||||||||||||||||||||| || ||||||||| ||  |||||  |||||||||||||||||||||||||||||||||||||||||||     
T  55476345 atcaaggttatcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagg 55476246  T
Q  201 acttttgtagaatcgatata 220  Q
    ||||||||||||||||||||    
T  55476245 acttttgtagaatcgatata 55476226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 346 - 454
Target Start/End: Complemental strand, 7044831 - 7044723
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    ||||||||  |||||||||||||| |||||||||| |||||||||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgaca 7044732  T
Q  446 acaatggtt 454  Q
    |||| ||||    
T  7044731 acaacggtt 7044723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 13551463 - 13551597
Alignment:
Q  120 ggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatat 219  Q
    ||||||||||||  | ||||| ||||||||||||| |  ||||||||||||||||| |||||||||||||||||||| || |||||| |||||||||| |    
T  13551463 ggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgattt 13551562  T
Q  220 aggaaattgtaaaatcgcaatcgaaattgatggat 254  Q
    || ||||| ||||||| ||||| |||||| |||||    
T  13551563 agaaaattttaaaatcacaatcaaaattgctggat 13551597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 100 - 310
Target Start/End: Complemental strand, 24719926 - 24719722
Alignment:
Q  100 aatcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaag 199  Q
    ||||||| |||||||||||| || ||| ||||  | |||||||||| ||||||||       || ||||||| ||||| |||||||||||||||||| |     
T  24719926 aatcaaggttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaat-------cgaaaaatcgaaatcacaatcgaaggattttactcgat 24719834  T
Q  200 aacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa-aaaatttaatactaaatatatgttatgaatggtat 298  Q
     |||||||||||||||||||| ||||| |||||||||||||| |||| ||||  ||||||| ||  |||  ||||  |||||||||||||| ||| ||||    
T  24719833 tacttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaaatcgatgagttttaccaaagcaaaaataatgttaaatatatgttataaattgtat 24719734  T
Q  299 atagtcataaat 310  Q
    ||||||||||||    
T  24719733 atagtcataaat 24719722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 163 - 313
Target Start/End: Original strand, 9149556 - 9149708
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgt-aaaatcgcaatcgaaattgatggattttaccc 261  Q
    |||||||  |||||||||| ||||||||||||||||  ||||| |||||||||||||| ||||| || |||| ||||||| |||||||| |||||||||     
T  9149556 gtaaaattccaatcaaaattgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaattgatagattttacca 9149655  T
Q  262 aaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
    ||| |||  |||| ||||||||||||||| ||| ||||||||| |||||||||    
T  9149656 aaagaaaaataatgctaaatatatgttataaattgtatatagttataaatgac 9149708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 346 - 451
Target Start/End: Original strand, 18459733 - 18459838
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    |||||||| ||||||| ||||||| |||||||||| |||||||||| ||||| | |||| ||||||| ||||||||||||||| |||||||||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  446 acaatg 451  Q
    ||||||    
T  18459833 acaatg 18459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 346 - 446
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    |||||||| |||||||||||||||||||||| ||| ||||| | ||| |||| ||||||||||||| ||| ||||||||||||||||||||||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  446 a 446  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 161 - 300
Target Start/End: Complemental strand, 10394907 - 10394768
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||| |||||||  ||||| |||| ||||||| |||||    
T  10394907 tcgtaaaatcgcaatcaaaatcgaaggactttactcaactacttttgtagaatcggtataggaaatcgtaaaattacaatc-aaatcgatggatattacc 10394809  T
Q  261 caaa-aaatttaatactaaatatatgttatgaatggtatat 300  Q
     ||| |||  ||||  |||||||||||||| ||| ||||||    
T  10394808 aaaacaaaaataatggtaaatatatgttataaattgtatat 10394768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 347 - 450
Target Start/End: Complemental strand, 4156866 - 4156763
Alignment:
Q  347 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 446  Q
    |||||||  |||||| |||||||||||  ||||| ||||||| |||||||| ||||||| ||||||||  |||||| |||||||||||||||||||||||    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T
Q  447 caat 450  Q
    ||||    
T  4156766 caat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 164 - 313
Target Start/End: Complemental strand, 7045057 - 7044907
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa 263  Q
    |||||||||||||||||||||| ||||||||||||  ||||||| | |||||||||| ||||| |||||||  ||||| |||| ||||||||||||| ||    
T  7045057 taaaatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttaccaaa 7044958  T
Q  264 a-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
    | |||  ||||  |||| || |||||| | | ||||||||| |||||||||    
T  7044957 acaaaaataatgttaaacatgtgttataatttgtatatagtgataaatgac 7044907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 103 - 313
Target Start/End: Complemental strand, 7045299 - 7045086
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||| || | ||||||||  | |||||||||| |||||||| |  | || |||||||||||||||||||||||||||||||||||   |    
T  7045299 caaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttactcaactgc 7045200  T
Q  203 ttttgtagaatc--gatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtata 299  Q
    ||||  ||||||  |||||| ||||| |||||||  ||||| ||||  |||||| ||||| ||| |||  ||||  |||||||||||||| | | |||||    
T  7045199 ttttcaagaatcgagatataagaaatcgtaaaatatcaatcaaaatctatggatcttaccaaaacaaaaataatgttaaatatatgttataatttgtata 7045100  T
Q  300 tagtcataaatgac 313  Q
    |||| |||||||||    
T  7045099 tagtgataaatgac 7045086  T

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Target: chr4; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 357 - 451
Target Start/End: Complemental strand, 24719610 - 24719516
Alignment:
Q  357 attttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||| ||||||| |||||||||| |||||||||||||||| |||||| ||||||| || ||||||| | |||||||| ||||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaatg 24719516  T

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Target: chr4; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 345 - 451
Target Start/End: Original strand, 6347088 - 6347194
Alignment:
Q  345 tggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgac 444  Q
    ||||||||  |||||||| || ||  |||||||||| ||||||||||||| || |||||  ||||||||||||||||||||||||||| || ||||||||    
T  6347088 tggattttacctattttgagactcggctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgac 6347187  T
Q  445 aacaatg 451  Q
    || ||||    
T  6347188 aataatg 6347194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 346 - 451
Target Start/End: Complemental strand, 7452523 - 7452419
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    |||||||| |||| || ||| || |||||||||| | ||||||||||||||| |||||  |||||| ||||||||||| ||||||||||||||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggattga-gtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  446 acaatg 451  Q
    ||||||    
T  7452424 acaatg 7452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 5943066 - 5943166
Alignment:
Q  136 cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatc 235  Q
    |||||||||| |||||||| |  | ||||||||||||||  ||||| ||||||||||||||||  ||||||||||||||| | || ||||| ||||||||    
T  5943066 cgaaagggaagagcaaaatcaaaaatcgtaaaatcgcaagtaaaattgaaggattttactcaactacttttgtagaatcggtttaagaaatcgtaaaatc 5943165  T
Q  236 g 236  Q
    |    
T  5943166 g 5943166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 7452802 - 7452731
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaa 233  Q
    |||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||| ||||| ||||||    
T  7452802 tcgtaaaatcgcaatcaaaatcgaagga-tttactcaactacttttgtagaatcaatatacgaaatcgtaaaa 7452731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 8367501 - 8367437
Alignment:
Q  159 actcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| |||  ||||||||||||    
T  8367501 actcgtaaaattgcaatcaaaatcgaaggattttactcaaggactttggtaatatcgatatagga 8367437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 4157386 - 4157269
Alignment:
Q  102 tcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactc---gtaaaatcgcaatcaaaatcgaaggattttactcaa 198  Q
    |||||||| |||||||||||| ||| |||  || |||||||||| ||||||||    | ||   |||||||||||||||| |||||| ||||||||||||    
T  4157386 tcaagtttatcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaa 4157287  T
Q  199 gaacttttgtagaatcga 216  Q
      ||||||||||||||||    
T  4157286 ctacttttgtagaatcga 4157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 4157673 - 4157556
Alignment:
Q  102 tcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactc---gtaaaatcgcaatcaaaatcgaaggattttactcaa 198  Q
    |||||||| |||||||||||| ||| |||  || |||||||||| ||||||||    | ||   |||||||||||||||| |||||| ||||||||||||    
T  4157673 tcaagtttatcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaa 4157574  T
Q  199 gaacttttgtagaatcga 216  Q
      ||||||||||||||||    
T  4157573 ctacttttgtagaatcga 4157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 8931516 - 8931441
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaa 239  Q
    ||||| ||||| |||||||||||||||||||||||  |||||  || |||| ||||| |||||| |||||||||||    
T  8931516 taaaaccgcaaccaaaatcgaaggattttactcaactactttgataaaatcaatataagaaattataaaatcgcaa 8931441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 399 - 450
Target Start/End: Original strand, 9149813 - 9149864
Alignment:
Q  399 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||| |||||||||  |||||||||||||||||||||||||||| |||||    
T  9149813 aaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 18459463 - 18459528
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaat 226  Q
    ||||||||||||||| ||||||||||||||| ||| ||  | ||||||||||| |||||| |||||    
T  18459463 tcgtaaaatcgcaattaaaatcgaaggatttgacttaactaattttgtagaattgatataagaaat 18459528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 5846458 - 5846509
Alignment:
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||| ||||||||||||||||  ||||||||||| |||||| |||||||||    
T  5846458 aagtcgcaaaatcctggattttgagatttaagtcgtgattttaacaacaatg 5846509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 8743599 - 8743658
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagg 222  Q
    |||| |||| ||||||||||||| ||||||||||||  || |||||| ||||||||||||    
T  8743599 gtaacatcgtaatcaaaatcgaaagattttactcaactacatttgtataatcgatatagg 8743658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 4157084 - 4157050
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttact 195  Q
    |||||||||||||||||||||||| ||||||||||    
T  4157084 tcgtaaaatcgcaatcaaaatcgatggattttact 4157050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 7803110 - 7803049
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaa 408  Q
    |||||||||||||||||||||||| |||||| ||| ||||| || || |||| ||||||||||    
T  7803110 ggattttgtctattttgggattctgctatgggtttgagtcgctg-agctgaataaagtcacaa 7803049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 7825064 - 7825002
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaa 408  Q
    |||||||| ||||||||||||||| |||||| ||| |||||  |||| |||| ||||||||||    
T  7825064 ggattttgcctattttgggattctgctatgggtttgagtcgcggaagctgaataaagtcacaa 7825002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 18459563 - 18459601
Alignment:
Q  275 ctaaatatatgttatgaatggtatatagtcataaatgac 313  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  18459563 ctaaatatatgttatgaactgtatatagtcataaatgac 18459601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 5884129 - 5884174
Alignment:
Q  178 aaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    |||||||||||||||||||||  | |||||||||||| ||||||||    
T  5884129 aaatcgaaggattttactcaactatttttgtagaatcaatatagga 5884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 8409863 - 8409790
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcga 184  Q
    ||||||||||||||||||||| ||  |||||||| ||||||||||   | |  |||||||| ||||||||||||    
T  8409863 tcaaaatcgggactttacttcaagttgaaagggagtagcaaaattgagatttataaaatcgtaatcaaaatcga 8409790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 451
Target Start/End: Original strand, 8744087 - 8744132
Alignment:
Q  406 caaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||| ||||| ||||||||||||| |||| ||||||||||    
T  8744087 caaaatcctgaatttttggatttaagtcggaatttcgacaacaatg 8744132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 111 - 457
Target Start/End: Complemental strand, 8788 - 8436
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    |||||||||||||||||||||  | |||||||||||| ||||||  | ||||||||||||||||||||||| ||||||||||||||||| | ||| ||||    
T  8788 tcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagtattttcgtag 8689  T
Q  211 aatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaat 310  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||  |||||||||||||||| ||| ||||||||||||||||||||    
T  8688 aatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaa--taatactaaatatatggtataaatggtatatagtcataaat 8591  T
Q  311 gacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaag 402  Q
    ||| || ||||||||        ||||||||||||||||| ||||||||||  |||||||||||||||| || |||||||||||||||||||||||||||    
T  8590 gacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaaggtgaagaaag 8491  T
Q  403 tcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgta 457  Q
    || ||||||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  8490 tcgcaaaatcgtggattttaggatttaagtagggattttgacaacaatgattgta 8436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 108 - 451
Target Start/End: Original strand, 21846053 - 21846398
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||| |||||||||| |  | |||||||||||||||||||  | |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  21846053 ttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggacttttg 21846152  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||| |||  |||||||| |||    
T  21846153 tagaatcgatataagaaattgtaaaatcgcaatcaaaatagatgaattttacccaaaaaaattaatactaaatatatgttataaattatatatagttata 21846252  T
Q  308 aatgacctaatttataa--gaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtca 405  Q
    |||||| |   | | ||   ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||| ||||||     
T  21846253 aatgacgtttatgaaaaataaaatcgcaatcaaaatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcg 21846352  T
Q  406 caaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  21846353 caaaatcctggattttaggatttaactcgggattttgacaacaatg 21846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 101 - 453
Target Start/End: Original strand, 9351835 - 9352195
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaga 200  Q
    |||||| |||||||||||  |||||||||||  | |||||| ||||||||||||  | ||||||||||||||||||||||||| |||||||||  ||||     
T  9351835 atcaaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaagg 9351934  T
Q  201 acttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatat 300  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||| |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  9351935 acttttgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttataaatggtatat 9352034  T
Q  301 agtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaag 392  Q
    ||||| ||||||| || ||||||||        ||||||||||||||||||| |||||||||||||||||||| ||| |||| ||||| |||| ||||||    
T  9352035 agtcaaaaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattttgtctattttgggactctgctatagatttgagtctttgaag 9352134  T
Q  393 gtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggt 453  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9352135 gtgaagaaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaatggt 9352195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 103 - 454
Target Start/End: Complemental strand, 13100545 - 13100187
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||||||||||||||| || ||||||||||| |||||||  | |||||||||||||||||||||||| |||||||||||||||| ||    
T  13100545 caaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggac 13100446  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
     ||||||||||||||||| |||||  ||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||||||  ||||||||||||    
T  13100445 atttgtagaatcgatataagaaatcttaaaatcgcaatcaaaatcgatggattttacccaaaaaa-taaatactaaatatatgttacaaatggtatatag 13100347  T
Q  303 tcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    ||||||||||| |  ||||||||        |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||| ||    
T  13100346 tcataaatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgt 13100247  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 454  Q
    ||||||||||  |||||||| |||||||| |||||||| ||||||||||||| |||||||    
T  13100246 gaagaaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaataatggtt 13100187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 103 - 451
Target Start/End: Original strand, 18304592 - 18304941
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||||||||| |||||  | ||||||| || ||||||||       |||||||||||| ||||||||||||||||||||| ||| ||    
T  18304592 caaggttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaat-------cgtaaaatcgcattcaaaatcgaaggattttactaaaggac 18304684  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||    
T  18304685 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaaaaaattaatactaaatatacgttatgaatggtatatag 18304784  T
Q  303 tcataaatgacctaatttataag-------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcg-ttgaaggt 394  Q
    ||||||||||| ||  |||||||       |||||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||| ||||||||    
T  18304785 tcataaatgacttagcttataagaaatcgtaaatcgcaatcaaaattgatggattttgtctattttgagattctactatgaatttgagtcgtttgaaggt 18304884  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  18304885 gaagaaagtcgcaaaatactggattttaggatttaagttgggattttgacaacaatg 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 112 - 451
Target Start/End: Original strand, 9954816 - 9955165
Alignment:
Q  112 caaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtaga 211  Q
    ||||||||| |||||||||   | |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||  ||| ||||||  |||    
T  9954816 caaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaaga 9954915  T
Q  212 atcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt--taatactaaatatatgttatgaatggtatatagtcataaa 309  Q
    ||| |||||||||||||||||||||||||| | || |||||||||||| ||||||| |  ||||||| |||||||||||| |||||||||||||||||||    
T  9954916 atccatataggaaattgtaaaatcgcaatcaagatcgatggattttacacaaaaaaataataatactgaatatatgttataaatggtatatagtcataaa 9955015  T
Q  310 tgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaa 401  Q
    ||||||| ||||||||        ||||||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||    
T  9955016 tgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgggattctacattggatttaagtcgttgaaggtgaagaaa 9955115  T
Q  402 gtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||| |||||||||  |||||||||||||||| ||||||||||||||||||    
T  9955116 gtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 9955165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 103 - 451
Target Start/End: Original strand, 25146542 - 25146898
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||| ||||||||||||  |  ||||||||||||||||||  | | |||||||||||||||||||||||||||||||||||||||  |    
T  25146542 caaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtc 25146641  T
Q  203 ttttgtagaatcgatataggaaattgt-aaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatata 301  Q
    ||| ||||||||||||||| ||||| | |||||||||||| |||| |||||||||||||||||||| || |||||||||||| ||||| ||| |||||||    
T  25146642 tttcgtagaatcgatatagaaaattctaaaaatcgcaatcaaaatcgatggattttacccaaaaaaattgatactaaatatacgttataaattgtatata 25146741  T
Q  302 gtcataaatgacctaatttataag-------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    ||||||||| || || ||||||||       |||||||||| ||||| |||| | |||||||||||||||||||||||||| |||| |||||||||||||    
T  25146742 gtcataaataacttagtttataagaaatcgtaaatcgcaattaaaattgatgtactttgtctattttgggattctactatgaatttgagtcgttgaaggt 25146841  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  25146842 gaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaatg 25146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 159 - 450
Target Start/End: Complemental strand, 23528955 - 23528656
Alignment:
Q  159 actcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta 258  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  23528955 actcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttta 23528856  T
Q  259 cccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatggatt 350  Q
    ||||| ||   ||||| |||||||| ||||| ||||||||||||||||||||||| |  ||||||||||        |||||| ||||||||||| ||||    
T  23528855 cccaataataataataataaatatacgttataaatggtatatagtcataaatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagatt 23528756  T
Q  351 ttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||    
T  23528755 ttgcctattttaggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaat 23528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 108 - 443
Target Start/End: Original strand, 16125234 - 16125580
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||| |||||||| ||||||||||  | ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| || ||||    
T  16125234 ttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttg 16125333  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||  |||||||||||   |||||||||||||||||||| ||||||||||| |||||    
T  16125334 tagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggacgttacccaaaaataataatactaaatatatgttataaatggtatatattcata 16125433  T
Q  308 aatgacctaatttataa--------gaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg---a 396  Q
    |||||| || |||||||         ||||||||||||||||| |||||||||| |||||||  |||| ||||||||||||| |||||||||||||   |    
T  16125434 aatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaaa 16125533  T
Q  397 agaaagtcacaaaatcctggattttaggatttaagtcgggattttga 443  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||    
T  16125534 agaaagtcgcaaaatcctgaattttaggatttaagtcaggattttga 16125580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 136 - 448
Target Start/End: Original strand, 19009755 - 19010073
Alignment:
Q  136 cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatc 235  Q
    |||||||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19009755 cgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatataggaaattgtaaaatc 19009854  T
Q  236 gcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aa 327  Q
    |||||| ||||   |||||||||||| |||||   |||| |||  ||||||||| ||||||||||||| ||||||||| |||||||||||        ||    
T  19009855 gcaatcaaaatcattggattttaccccaaaaaaaaaatattaa--atatgttataaatggtatatagttataaatgacttaatttataagaaatcgtaaa 19009952  T
Q  328 atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatt 427  Q
    ||||||||||||||||||||||||||  |||||| | ||| ||||||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||    
T  19009953 atcgcaatcaaaatcgatggattttgcttattttagaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaattttaggatt 19010052  T
Q  428 taagtcgggattttgacaaca 448  Q
    |||||| ||||||||||||||    
T  19010053 taagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 103 - 450
Target Start/End: Original strand, 13276033 - 13276395
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatca------------aaatcgaaggatt 190  Q
    |||| ||||||||||||||||||||||    | |||||| |||||||||||| || |||||||||||||||||||            |||||||||||||    
T  13276033 caagattgtcaaaatcgggactttactg---gtcgaaagagaatagcaaaatcaggactcgtaaaatcgcaatcagaatcaaaatcaaaatcgaaggatt 13276129  T
Q  191 ttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatg 290  Q
      ||| ||| | |||||||||||||||||| ||||||||||||| |||||| |||| |||||| | |||| |||||   ||||||||||||||||||||     
T  13276130 --acttaaggaattttgtagaatcgatataagaaattgtaaaattgcaatcaaaatcgatggactataccaaaaaataataatactaaatatatgttata 13276227  T
Q  291 aatggtatatagtcataaatgacctaatttataagaaat--------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaa 382  Q
    |||| |||||||||||||||||| |||||||||||||||        |||||||||||||||| ||||||| ||||||| |||||||||||||||||||     
T  13276228 aatgatatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttaggattctactatggatttag 13276327  T
Q  383 gtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  13276328 gtcgttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 101 - 449
Target Start/End: Original strand, 42179843 - 42180193
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaga 200  Q
    |||||| ||||||||||| | | ||||||||| |   ||||||||||||| |||    ||||||||||||||||||||||||||||||||||| || ||     
T  42179843 atcaaggttgtcaaaatcagaaatttacttcgggttaaaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggattttattcgagg 42179942  T
Q  201 acttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt-taatactaaatatatgttatgaatggtata 299  Q
    |||||||||||       ||||||||||||||| | ||||| |||| ||||||||||||| |||||| | |||||||| ||||||||||| |||||||||    
T  42179943 acttttgtaga-------taggaaattgtaaaaccacaatcaaaatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtata 42180035  T
Q  300 tagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaa 391  Q
    |||||||||||||| || ||||||||||||||        ||||||||||||||| |||||| ||||||||  |||||||||||||||| | ||||||||    
T  42180036 tagtcataaatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaa 42180135  T
Q  392 ggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    || |||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||    
T  42180136 ggggaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 104 - 455
Target Start/End: Original strand, 9128612 - 9128974
Alignment:
Q  104 aagtttgtcaaaatcgggactttacttcgag-acgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||||| |||||||||||| ||||| || || |  |||||||||||||||||  | |||||||||||| | |||||||||||||||||||||| ||| |     
T  9128612 aagtttatcaaaatcgggattttacctcaagtaaaaaagggaatagcaaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttactaaaggat 9128711  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca--aaaaatttaatactaaatatatgttatgaatggtatat 300  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||| ||| |||||||  |  | ||   |||||||||| ||||||||| ||||||||||    
T  9128712 ttttgtaggatcgatatagaaaattgtaaaatcgcaatcaaaatttatgaattttacaaatgataataataatactaaagatatgttataaatggtatat 9128811  T
Q  301 agtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaag 392  Q
    ||||| |||| || || ||||||||        ||||||||||||||||||||| ||||||||||||||  |||||||||||  |||| ||||||| ||     
T  9128812 agtcaaaaataacttagtttataagaaatcgtcaaatcgcaatcaaaatcgatgaattttgtctattttaagattctactataaatttgagtcgttaaat 9128911  T
Q  393 gtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttg 455  Q
    |||||||||||| ||| |||||   ||||||||||||||||| |||||| |||||||| ||||    
T  9128912 gtgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaacaatagttg 9128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 103 - 449
Target Start/End: Original strand, 17869524 - 17869873
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||||||||| || |||  | | |||||||| ||||||||  | || ||||||||||||||||||||| |||||||||||||||| ||    
T  17869524 caagattgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggac 17869623  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    |||| ||||||| || ||  ||||||||||||||||||| |||| |||| |||||||| |||||   |||||||||||||||||| | ||| |||||| |    
T  17869624 ttttatagaatcaatgtaaaaaattgtaaaatcgcaatcaaaatcgatgaattttaccaaaaaataataatactaaatatatgttgtaaatagtatatgg 17869723  T
Q  303 tcataaatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    | ||||| ||| || |||| ||||||||        |||||||||||||| | |||||| ||||||| |||||||||| |||||||| ||||| ||||||    
T  17869724 ttataaaagacttagtttaaaagaaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggt 17869823  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||||||||| ||||||||     |||| |||||||||| |||||||||||||||    
T  17869824 gaagaaagtcgcaaaatcc-----tttaagatttaagtcaggattttgacaacaa 17869873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 163 - 448
Target Start/End: Complemental strand, 12513566 - 12513283
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca 262  Q
    |||||||||||| ||||||| |||||||||||||||  |||| ||||||       || |||||||||||||||||||| |||| ||| ||||||||| |    
T  12513566 gtaaaatcgcaaccaaaatcaaaggattttactcaactacttctgtaga-------taagaaattgtaaaatcgcaatcaaaatcgatagattttacc-a 12513475  T
Q  263 aaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgt 354  Q
    |||||| ||||| |||||||  |||||  ||||||||||||| |||||||| || ||||||||||||||        ||||||||||||||||||||||     
T  12513474 aaaaatataatattaaatat--gttatatatggtatatagtcgtaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttga 12513377  T
Q  355 ctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
     ||||||  |||| |||||||||||| ||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  12513376 ttattttatgattttactatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 224 - 451
Target Start/End: Original strand, 9327109 - 9327345
Alignment:
Q  224 aattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaa--tgacctaattta 321  Q
    |||||||||||||||||| |||| |||| ||||||||||||||| | |||||||||||||| |||| ||||||||||||||| |||  |||| || ||||    
T  9327109 aattgtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaat-aatactaaatatatattataaatggtatatagtcaaaaaaatgacttagttta 9327207  T
Q  322 taagaaat--------cgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcc 413  Q
    ||||||||        |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||| ||||| ||    
T  9327208 taagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccc 9327307  T
Q  414 tggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |  ||||||||||||||||| ||||||| |||||||||    
T  9327308 taaattttaggatttaagtcaggattttaacaacaatg 9327345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 14074262 - 14074395
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||| ||||||||||||  | |||||||||||||||||||| | |||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  14074262 ttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttactcaaggacttttg 14074361  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatc 241  Q
    ||||||||||||||||||||||||||||||||||    
T  14074362 tagaatcgatataggaaattgtaaaatcgcaatc 14074395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 47786155 - 47785986
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||| ||| |||||||||||||||||||||||  ||||||||||||| |||||| |||||   ||||||| |||  |||| |||||||||||||    
T  47786155 tcgtaaaatcacaaccaaaatcgaaggattttactcaactacttttgtagaattgatataagaaatcacaaaatcgaaataaaaatcgatggattttacc 47786056  T
Q  261 -caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 331  Q
     ||||||||  ||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  47786055 acaaaaaat--aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcg 47785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 17055691 - 17055850
Alignment:
Q  100 aatcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaag 199  Q
    ||||||| |||||||||||||| |||||||| | | |||||||| || | |||||  | ||||||||||||||||||||||||||||||||||||||||     
T  17055691 aatcaaggttgtcaaaatcgggtctttacttag-gtcgaaaggggattgtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaac 17055789  T
Q  200 aacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
     |||||||||||||||||| | ||||||||||||| |||||| |||| |||||||||||||    
T  17055790 tacttttgtagaatcgatacaagaaattgtaaaattgcaatcaaaatggatggattttacc 17055850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 161 - 361
Target Start/End: Complemental strand, 32881617 - 32881416
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||||||||   |||||||||||||||||||||  || ||||||||||||||||| |||||||||||||||||||| ||||  |||| |||||      
T  32881617 tcgtaaaatcgcaactgaaatcgaaggattttactcaactacgtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcaatggctttta-- 32881520  T
Q  261 caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggatttt 352  Q
    |||||     ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||        ||||||||||||||||||||| |||||    
T  32881519 caaaa-----aatactaaatatatgttataaatggtatatagtcatgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 32881425  T
Q  353 gtctatttt 361  Q
    | |||||||    
T  32881424 gcctatttt 32881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 41032675 - 41032800
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    |||||||||| ||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||| || |||||||||| ||| || ||    
T  41032675 aaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctgaattctacga 41032774  T
Q  426 tttaagtcgggattttgacaacaatg 451  Q
    ||||||||| ||||||||||||||||    
T  41032775 tttaagtcgagattttgacaacaatg 41032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 17197311 - 17197423
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||||||||||||||| || ||||||||| |||||||||  | ||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  17197311 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttactcaaggacttttgtag 17197410  T
Q  211 aatcgatatagga 223  Q
    |||| || |||||    
T  17197411 aatcaatgtagga 17197423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 103 - 257
Target Start/End: Original strand, 41032547 - 41032701
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||| |||| ||||||||  |  ||||| ||| |||||||||  || ||||||||||||||  |||||||||| |||||||||||  |     
T  41032547 caaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttactcaactag 41032646  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttt 257  Q
    |||||||||||||||||| |||||||||||||||||||  |||| ||||||||||    
T  41032647 ttttgtagaatcgatataagaaattgtaaaatcgcaattaaaatcgatggatttt 41032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 17056004 - 17056129
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    |||||||||||||||||||||||||||   ||||||   |||||||||||||| | |||||||||||||| ||||| |  ||||||||||||||||||||    
T  17056004 aaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctggattttagga 17056103  T
Q  426 tttaagtcgggattttgacaacaatg 451  Q
    ||||| || |||||||||| ||||||    
T  17056104 tttaaatcaggattttgactacaatg 17056129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 346 - 451
Target Start/End: Original strand, 18337547 - 18337651
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    |||||||| |||||||||| |||| |||||||||| |||||||||||||||| |||||  ||||||||||||||||||| | ||||||||||||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttagg-tataagtcgggattttgaca 18337645  T
Q  446 acaatg 451  Q
    ||||||    
T  18337646 acaatg 18337651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 375 - 450
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  375 ggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 355 - 450
Target Start/End: Original strand, 14074404 - 14074499
Alignment:
Q  355 ctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||||  ||||||||| ||||||| ||||||||||  ||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaat 14074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 12002640 - 12002751
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||||||||||||| ||  || ||||||||| |||||||||| | ||||  |||||| |||| |||||||||||||||||||||   |||||||    
T  12002640 ttgtcaaaatcgggactttaatttaagtcgaaagggagtagcaaaattgggactc--aaaatcacaataaaaatcgaaggattttactcatagacttttg 12002737  T
Q  208 tagaatcgatatag 221  Q
    ||||||||||||||    
T  12002738 tagaatcgatatag 12002751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 278 - 432
Target Start/End: Complemental strand, 18228380 - 18228230
Alignment:
Q  278 aatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatc-------gcaatcaaaatcgatggattttgtctattttgggattcta 370  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||||||        |||||||||| ||||||||||| ||||||||||||||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaaatccaatcaaaattgatggattttgcctattttgggattcta 18228281  T
Q  371 ctatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagt 432  Q
    |||           |||||||||||| |||| ||  |||||| |||||||||||||||||||    
T  18228280 cta-----------cgttgaaggtgatgaaaatcgtaaaatcttggattttaggatttaagt 18228230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 138 - 294
Target Start/End: Complemental strand, 16434829 - 16434673
Alignment:
Q  138 aaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgc 237  Q
    |||||||||||||||||    | ||||||||| |||||||||||||||||||||||||| | |||||||||||||| ||||||  | ||   ||||||||    
T  16434829 aaagggaatagcaaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaacttttgtagaattgatata--agataacaaaatcgc 16434732  T
Q  238 aatcgaaattgatggattttacccaa--aaaatttaatactaaatatatgttatgaatg 294  Q
    |||| |||| |||||||| |||| ||  |||| |||||  |||||||||||||| ||||    
T  16434731 aatcaaaatcgatggattctaccaaaacaaaaattaatgataaatatatgttataaatg 16434673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 8773613 - 8773505
Alignment:
Q  110 gtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 209  Q
    |||||||||| ||||||||||  || ||||||||||||||| ||| |   |||||||||||||||| ||||| ||||||||||||| ||| | |||||||    
T  8773613 gtcaaaatcgagactttacttaaagtcgaaagggaatagcagaatga---ctcgtaaaatcgcaattaaaattgaaggattttacttaaggatttttgta 8773517  T
Q  210 gaatcgatatag 221  Q
    |||| |||||||    
T  8773516 gaattgatatag 8773505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 450
Target Start/End: Original strand, 12800623 - 12800710
Alignment:
Q  363 ggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||||| |||||| ||||| |||||||||| ||||||||||||  ||||||||  |||||||||||||||| |||||||| ||||||||    
T  12800623 ggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 30619234 - 30619159
Alignment:
Q  166 aaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatc 241  Q
    |||||||||  ||||||||||||||||||||||  |||||||||||||||||||   |||||||||||||||||||    
T  30619234 aaatcgcaacaaaaatcgaaggattttactcaactacttttgtagaatcgatatgaaaaattgtaaaatcgcaatc 30619159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 451
Target Start/End: Original strand, 34478833 - 34478900
Alignment:
Q  384 tcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||||||||| |||||||||    
T  34478833 tcgttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaatg 34478900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 27502128 - 27502230
Alignment:
Q  102 tcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaa 201  Q
    ||||| ||||||||||||||| |||||||| || | | |  |||||||||||     |||| |||||| |||||||||||||||||||||||||||||||    
T  27502128 tcaaggttgtcaaaatcgggaatttacttcaagtcaacatagaatagcaaaaccgagactcataaaattgcaatcaaaatcgaaggattttactcaagaa 27502227  T
Q  202 ctt 204  Q
    |||    
T  27502228 ctt 27502230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 346 - 458
Target Start/End: Complemental strand, 8772809 - 8772696
Alignment:
Q  346 ggattttgtctatttt-gggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgac 444  Q
    ||||||||||| |||| |||| ||| |||||||||| ||| ||||||| |  | |||||| |||||| ||||||||| ||||||||||||||||| |||     
T  8772809 ggattttgtctttttttgggactctgctatggatttgagttgttgaagctacacaaagtcgcaaaattctggattttgggatttaagtcgggattctgat 8772710  T
Q  445 aacaatggttgtaa 458  Q
    ||| ||| ||||||    
T  8772709 aaccatgcttgtaa 8772696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 9321550 - 9321599
Alignment:
Q  144 aatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggatttta 193  Q
    |||||||||||  | |||||||||||||||||||||||||||||||||||    
T  9321550 aatagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggatttta 9321599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 447
Target Start/End: Original strand, 27917477 - 27917578
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    ||||||||  ||| ||| |||||| ||||| ||||  || ||||||||| || ||| || ||||||||| ||||| || |||||||||||||||||||||    
T  27917477 ggattttgcttatcttgtgattctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgaca 27917576  T
Q  446 ac 447  Q
    ||    
T  27917577 ac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 27502239 - 27502335
Alignment:
Q  358 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 454  Q
    |||||||||||| |||||||||| ||||||||||| | || ||||| ||||||  ||||||||| | | ||||| || ||||||| |||| ||||||    
T  27502239 ttttgggattctgctatggatttgagtcgttgaagttaaacaaagttacaaaaatctggattttggaacttaagccgcgattttggcaaccatggtt 27502335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 22789480 - 22789421
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 220  Q
    |||||||||| ||||||||||| |||||||||||| | | ||||||||||| ||||||||    
T  22789480 tcgtaaaatcacaatcaaaatcaaaggattttactaatggacttttgtagactcgatata 22789421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 452
Target Start/End: Complemental strand, 24117111 - 24117005
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    ||||||||| | ||||||||||||| |||  |||| | |||||||||||||| |||||   |||||| |  ||||||| |||||| | || |||||||||    
T  24117111 ggattttgtttgttttgggattctaatataaatttgaatcgttgaaggtgaataaagttgtaaaatcttaaattttagaatttaaattggaattttgaca 24117012  T
Q  446 acaatgg 452  Q
    |||||||    
T  24117011 acaatgg 24117005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 451
Target Start/End: Complemental strand, 47785836 - 47785791
Alignment:
Q  406 caaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||    
T  47785836 caaaatcctgaattttaggatttatgttgggattttgacaacaatg 47785791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 18228533 - 18228481
Alignment:
Q  189 ttttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatc 241  Q
    ||||||||||   ||||||||||||||||||| ||||| ||||||||||||||    
T  18228533 ttttactcaacttcttttgtagaatcgatataagaaatcgtaaaatcgcaatc 18228481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 9954770 - 9954821
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaat 154  Q
    |||| |||||||||||||||||||||||   | |||||||||||||||||||    
T  9954770 caaggttgtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaat 9954821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 17055999 - 17056033
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttact 195  Q
    |||||||||||||||||||||||| ||||||||||    
T  17055999 tcgtaaaatcgcaatcaaaatcgatggattttact 17056033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 451
Target Start/End: Complemental strand, 16417345 - 16417308
Alignment:
Q  414 tggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  16417345 tggatattaggatttaagtcgcgattttgacaacaatg 16417308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 12003241 - 12003289
Alignment:
Q  399 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 447  Q
    |||||||||||| |||| ||||||  | |||||||||||||||||||||    
T  12003241 aaagtcacaaaaacctgaattttaaaacttaagtcgggattttgacaac 12003289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 103 - 451
Target Start/End: Complemental strand, 28746131 - 28745769
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||| |||||||||||||  | ||||||  |||||||||||  | |||||||||||||||||||||||||||| |||||||||||||||    
T  28746131 caaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaac 28746032  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  28746031 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatagtaaatatatgttataaatagtatatag 28745932  T
Q  303 tcataaatgacctaatttataa--------------gaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgtt 388  Q
    ||||||||||| || |||||||               ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||    
T  28745931 tcataaatgacttagtttataattataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatgaatttgagtcgtt 28745832  T
Q  389 gaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||||    
T  28745831 gaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaatg 28745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 103 - 452
Target Start/End: Complemental strand, 29067631 - 29067282
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||||| ||||||||||  | |||| ||||||||||||||  | |||| ||||||| |||||||| ||||||||||||||||||| |     
T  29067631 caaggttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatcaaa-tcgaaggattttactcaaggat 29067533  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaat--ttaatactaaatatatgttatgaatggtatat 300  Q
    ||||||||||| ||||| |||| |||||||||||||||| |||| ||||||||||||||||||||   |||| ||||||||||||         ||||||    
T  29067532 ttttgtagaattgatattggaagttgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaaattaacactaaatatatg---------gtatat 29067442  T
Q  301 agtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaag 392  Q
    ||||||||||||| || ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29067441 agtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcgttgaag 29067342  T
Q  393 gtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatgg 452  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  29067341 gtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaatgg 29067282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 108 - 447
Target Start/End: Complemental strand, 39428257 - 39427905
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaat----cgaaggattttactcaagaact 203  Q
    |||||||||||||||||||||||   |  ||||||||||||||||||  | |||| ||||||||||||||||||    |||||||||||||||||  | |    
T  39428257 ttgtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcgcaatcaaaataaatcgaaggattttactcaaagatt 39428158  T
Q  204 tttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa-aaaatttaatactaaatatatgttatgaatggtatatag 302  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||||||||||||| | | ||||||||    
T  39428157 tttgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataagtagtatatag 39428058  T
Q  303 tcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 394  Q
    ||||||||||| || ||||||||        ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||    
T  39428057 tcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacgt 39427958  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 447  Q
    |||||||||  |||||||| ||||||||  |||||| ||||||||||||||||    
T  39427957 gaagaaagttgcaaaatccaggattttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 108 - 451
Target Start/End: Original strand, 24619976 - 24620333
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||| |||||||||| || | |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  24619976 ttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagacttttg 24620075  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaattt---aatactaaatatatgttatgaatggtatatagtc 304  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||  |   |||||||||||||| |||| ||||||||||| ||    
T  24620076 tagaatcgatatagaaaattgtaaaatcgcaatcaaaattgttggattttaccaaaaaaaaataaaaatactaaatatattttataaatggtatataatc 24620175  T
Q  305 ataaatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtga 396  Q
    ||||||||| || |||||||||||||        ||||| |||||||||| |||||| |||||||| ||||||||| || |||| |||||||||||||||    
T  24620176 ataaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgagattctactgtgaatttgagtcgttgaaggtga 24620275  T
Q  397 agaaa---gtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||   ||| ||||||| |  ||||||||||||||||||| |||||||||||||||    
T  24620276 agaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaatg 24620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 159 - 450
Target Start/End: Complemental strand, 20756321 - 20756039
Alignment:
Q  159 actcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta 258  Q
    ||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  20756321 actcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttta 20756222  T
Q  259 cccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatc--------gcaatcaaaatcgatggatt 350  Q
    ||||||| |  ||||||||||||||||||                 ||||||||| || |||||||||||||        ||||||||||||||| ||||    
T  20756221 cccaaaagaaataatactaaatatatgtt-----------------ataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgatt 20756139  T
Q  351 ttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||| |||||||  ||||||||||||||||| |||| ||||||||||||||| || |||||||||| ||||||  ||||||||||||||||||||||||||    
T  20756138 ttgcctattttaagattctactatggatttgagtcattgaaggtgaagaaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 164 - 452
Target Start/End: Original strand, 8155964 - 8156262
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa 263  Q
    |||||||||||  || |||||||||||||||||||  |||||||||| || |||||| |||| ||||||||||||||| | || | ||||||||||| ||    
T  8155964 taaaatcgcaactaagatcgaaggattttactcaactacttttgtagcattgatataagaaactgtaaaatcgcaatcaatatcg-tggattttaccaaa 8156062  T
Q  264 aaaatt--taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttg 353  Q
    || | |  |||||||||||||||||||| ||||||||||||| |||||| || || ||||||||||||||        ||||||||||||||||||||||    
T  8156063 aataataataatactaaatatatgttataaatggtatatagttataaataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttg 8156162  T
Q  354 tcta-ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatgg 452  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||| ||| ||  ||||| ||| ||||||| |||||||| |||||||||||||||||||    
T  8156163 tctaattttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaacaatgg 8156262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 161 - 445
Target Start/End: Complemental strand, 17064604 - 17064326
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||| |||||| |||| |||||||||||||    
T  17064604 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataagaaattgtaaaattgcaatcaaaatcgatggattttacc 17064505  T
Q  261 caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggatttt 352  Q
     ||||||   |||||||||||              |||||||||||||||||| || ||||||||        |||||||||| |||||||||| |||||    
T  17064504 aaaaaaaaaaaatactaaata--------------tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaatttt 17064419  T
Q  353 gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    ||||||||| | ||||||||||| |||  |||||||||||||||| | | || |||||||||| |||||| ||||||||||||||||||||||    
T  17064418 gtctattttagaattctactatgaattggagtcgttgaaggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 136 - 450
Target Start/End: Complemental strand, 22137599 - 22137278
Alignment:
Q  136 cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatc 235  Q
    |||||| ||| |||||||| || | | |||||||| ||| ||||||| ||| |||||||||||  |||||||||||||||||||| ||||| |||||| |    
T  22137599 cgaaagagaagagcaaaatcagcaatagtaaaatcacaaccaaaatcaaagaattttactcaactacttttgtagaatcgatataagaaatcgtaaaacc 22137500  T
Q  236 gcaatcgaaattgatggattttacccaaaaaatt--taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag-------a 326  Q
      |||| |||||||||||||||| | ||||||||  |||||||||||||| ||||| ||| ||||||||||||||||||| || |  |||||       |    
T  22137499 aaaatcaaaattgatggatttta-caaaaaaattaataatactaaatata-gttataaatagtatatagtcataaatgacttagtaaataagaaatcgaa 22137402  T
Q  327 aatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggat 426  Q
    ||||||||| |||||||||||||||||  |||||||||||| |||||||||||| || |||| |||||||||||||||  || ||| || ||||||||||    
T  22137401 aatcgcaattaaaatcgatggattttgcatattttgggattttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttaggat 22137302  T
Q  427 ttaagtcgggattttgacaacaat 450  Q
    ||||||| ||||||| | ||||||    
T  22137301 ttaagtcaggattttaaaaacaat 22137278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 161 - 449
Target Start/End: Original strand, 3449142 - 3449419
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||||||| |||||||||| ||||||| ||||  |||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  3449142 tcgtaaaatcgcaaccaaaatcgaatgattttattcaactacttttgtagaatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 3449241  T
Q  261 caaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggatttt 352  Q
     |||||| | ||||||||||||||||                 || ||||||| || ||||||||||||||        |||| |||||| |||||||||    
T  3449242 aaaaaaaat-aatactaaatatatgt-----------------cacaaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggatttt 3449323  T
Q  353 gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    | ||||||| |||||||||||| ||||| || |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  3449324 gcctattttaggattctactatagattttag-cgttgaaggtaaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 163 - 441
Target Start/End: Complemental strand, 21963726 - 21963438
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca 262  Q
    |||||||| ||| ||||||  ||| |||||||||||  |||||| ||||||||||||| ||||| |||||| |  |||| |||||||||||||||||  |    
T  21963726 gtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgtaaaaccagaatcaaaattgatggattttacaaa 21963627  T
Q  263 aaaaatt--taatactaaatatatgttatgaatggtatata--gtcataaatgacctaatttataagaaatcgcaa-------tcaaaatcgatggattt 351  Q
    |||||||  |||||||||||||| ||||| ||| |||||||  |||||||||||| || |  ||||||||||| ||       |||||||||||||||||    
T  21963626 aaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataagaaatcgaaaatcgctatcaaaatcgatggattt 21963528  T
Q  352 tgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggatttt 441  Q
    ||  |||||| ||||| |||||||||||| ||||||| |||||||||||||||  |||||| || |||||||||||||||||||||||||    
T  21963527 tgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 163 - 441
Target Start/End: Complemental strand, 21986162 - 21985874
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca 262  Q
    |||||||| ||| ||||||  ||| |||||||||||  |||||| ||||||||||||| ||||| |||||| |  |||| |||||||||||||||||  |    
T  21986162 gtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgtaaaaccagaatcaaaattgatggattttacaaa 21986063  T
Q  263 aaaaatt--taatactaaatatatgttatgaatggtatata--gtcataaatgacctaatttataagaaatcgcaa-------tcaaaatcgatggattt 351  Q
    |||||||  |||||||||||||| ||||| ||| |||||||  |||||||||||| || |  ||||||||||| ||       |||||||||||||||||    
T  21986062 aaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataagaaatcgaaaatcgctatcaaaatcgatggattt 21985964  T
Q  352 tgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggatttt 441  Q
    ||  |||||| ||||| |||||||||||| ||||||| |||||||||||||||  |||||| || |||||||||||||||||||||||||    
T  21985963 tgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 226 - 432
Target Start/End: Original strand, 22494679 - 22494892
Alignment:
Q  226 ttgtaaaatcgcaatcgaaattgatggattttacccaaaaaat------ttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatt 319  Q
    |||||||||||||||| |||| ||||||||||||||||||||       || |||||||||||||||||| |||||||||||||||||| |||| || ||    
T  22494679 ttgtaaaatcgcaatcaaaatagatggattttacccaaaaaaaaaaaacttgatactaaatatatgttataaatggtatatagtcataactgacttagtt 22494778  T
Q  320 tat-aagaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggat 418  Q
    |||    ||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||| |||||||||||||||| |||||| |||||||   |||    
T  22494779 tatcgtaaaatcgcaatcaaaatcgatgaattttgtttattttaggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagat 22494878  T
Q  419 tttaggatttaagt 432  Q
    ||||||||||||||    
T  22494879 tttaggatttaagt 22494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 163 - 377
Target Start/End: Complemental strand, 42697143 - 42696920
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc-c 261  Q
    ||||||||||||  ||||| ||||||||||| ||||  |||||||||||||||||||| |||||  |||| |||||||| |||| |||||||||||||      
T  42697143 gtaaaatcgcaactaaaattgaaggattttattcaactacttttgtagaatcgatataagaaatcataaactcgcaatcaaaatcgatggattttaccaa 42697044  T
Q  262 aaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttg 353  Q
    ||||||   ||||| ||||||||||||| ||||||||||||||||||||||| || ||||||||        ||||||||||||||||||||| ||||||    
T  42697043 aaaaaaaaaaataccaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttg 42696944  T
Q  354 tctattttgggattctactatgga 377  Q
     |||||||| ||||||||||||||    
T  42696943 cctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 111 - 452
Target Start/End: Original strand, 22355848 - 22356184
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    |||||||||| ||||||| ||  | ||||| |||||||||||||  | |||||||||||||||||||||||| || ||||||| ||||| |||||||||     
T  22355848 tcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaagattttattcaaggacttttgtaa 22355947  T
Q  211 aatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaat 310  Q
    ||||||||    ||||||||||| ||||| | |||| ||||||||||||| |||||   ||||| |||||||||||||| |||||          |||||    
T  22355948 aatcgata----aaattgtaaaaccgcaaacaaaatcgatggattttaccaaaaaataataataataaatatatgttataaatgg----------taaat 22356033  T
Q  311 gacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg-aagaaa 401  Q
    ||| || ||||||||        ||||||||||||||||  ||||||||||  |||||| ||||||||||||| ||| || | ||||||| || || |||    
T  22356034 gacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaaaaaaa 22356133  T
Q  402 gtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatgg 452  Q
     ||  ||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  22356134 atcttaaaatcctgaattttaggatttaagtcggaattttgataacaatgg 22356184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 161 - 301
Target Start/End: Original strand, 25870154 - 25870294
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||||||| ||||||| |||||||||||||||  |  ||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||    
T  25870154 tcgtaaaatcgcaaccaaaatcaaaggattttactcaactaagtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttacc 25870253  T
Q  261 caaaaaatttaatactaaatatatgttatgaatggtatata 301  Q
     |||||   |||||||||||||||||||| |||||||||||    
T  25870254 aaaaaacaataatactaaatatatgttataaatggtatata 25870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 326 - 450
Target Start/End: Original strand, 30727696 - 30727820
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||| | |||||||| ||    
T  30727696 aaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaaga 30727795  T
Q  426 tttaagtcgggattttgacaacaat 450  Q
    |||||||| ||||||||| ||||||    
T  30727796 tttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 8592173 - 8592293
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||| |||||||||||||||||| || ||||||| |||||||||||    ||||||||||||||||||||||||||||||||||||||||| ||    
T  8592173 caaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 8592272  T
Q  203 ttttgtagaatcgatatagga 223  Q
    |||||||||||||||||||||    
T  8592273 ttttgtagaatcgatatagga 8592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 326 - 450
Target Start/End: Original strand, 24649693 - 24649818
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttg-tctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagg 424  Q
    ||||| || ||||||| |||| |||||| | |||||||| |||||||||||||||| ||||||||||||||||| |||||| |||||||| ||||||| |    
T  24649693 aaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatcctagattttacg 24649792  T
Q  425 atttaagtcgggattttgacaacaat 450  Q
    ||||||||||||||||||||||||||    
T  24649793 atttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 108 - 313
Target Start/End: Complemental strand, 27676786 - 27676580
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||| |||||| ||| ||| |||| || |||||||||| ||||||||    | || |||||||||||||||||||||| ||||||||||||  |||||||    
T  27676786 ttgttaaaatcaggattttgcttcaagtcgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactacttttg 27676687  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcat 306  Q
    || |||||||||| ||||| |||||||| ||||| ||||  |||||||||||| ||| |||   |||  |||||||||||||| |||  |||||||||||    
T  27676686 taaaatcgatataagaaatcgtaaaatcacaatcaaaatcaatggattttaccaaaacaaaaacaatgttaaatatatgttataaattatatatagtcat 27676587  T
Q  307 aaatgac 313  Q
    |||||||    
T  27676586 aaatgac 27676580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 3041570 - 3041458
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    |||||||||||| |||||||| || ||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 3041471  T
Q  211 aatcgatatagga 223  Q
    || |||| |||||    
T  3041470 aaacgatgtagga 3041458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 139 - 304
Target Start/End: Original strand, 6136379 - 6136543
Alignment:
Q  139 aagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgca 238  Q
    ||||||| |||||||| |  | |||||||||||||||||||||| || ||||||||||||  |||||| ||||||||||||| ||||| |||||||| ||    
T  6136379 aagggaaaagcaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttatagaatcgatataagaaatcgtaaaatcaca 6136478  T
Q  239 atcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtc 304  Q
    ||| |||| ||||||||||||| ||| |||  ||||||||| |||||||||  ||| ||||||||||    
T  6136479 atcaaaatcgatggattttaccaaaacaaaaataatactaactatatgtta--aattgtatatagtc 6136543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 177 - 331
Target Start/End: Original strand, 15515106 - 15515258
Alignment:
Q  177 aaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatact 276  Q
    |||||||||| |||||||||||  |||||| |||||||  || | |||||||||||||   |||  ||||  |||||||||||| |||||||  ||||||    
T  15515106 aaaatcgaagtattttactcaactacttttatagaatcattagaagaaattgtaaaattataataaaaatccatggattttaccaaaaaaat--aatact 15515203  T
Q  277 aaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 331  Q
    ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  15515204 aaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcg 15515258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 13286243 - 13286113
Alignment:
Q  159 actcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta 258  Q
    |||||||||||||||||||||||| || ||||||||||||  |||||||||||||||||||| ||||| |||||||| ||||  |||| |||||||||||    
T  13286243 actcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgtagaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggatttta 13286144  T
Q  259 cccaaa-aaatttaatactaaatatatgtta 288  Q
    || ||| |||  ||||||||| |||||||||    
T  13286143 ccaaaacaaaaataatactaactatatgtta 13286113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 18014338 - 18014226
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||||||||||||||| ||   ||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||| ||     
T  18014338 tcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttataa 18014239  T
Q  211 aatcgatatagga 223  Q
    || ||||||||||    
T  18014238 aaccgatatagga 18014226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 338 - 451
Target Start/End: Original strand, 25870389 - 25870506
Alignment:
Q  338 aaatcgatggattttgtctattttgggattctactatggatttaagtcgtt----gaaggtgaagaaagtcacaaaatcctggattttaggatttaagtc 433  Q
    |||||||||||||||| |||||||| | |||||||| | |||| |||||||    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  25870389 aaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagatgaagaaagtcacaaaatcttggattttaggatttaagtc 25870488  T
Q  434 gggattttgacaacaatg 451  Q
    | ||||||||||||||||    
T  25870489 gagattttgacaacaatg 25870506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 346 - 451
Target Start/End: Original strand, 15806531 - 15806635
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    |||||||| || |||||||||||| |||||||||| |||| ||||||||||| |||||| |||||| ||||||| ||||||||||||| |||||||||||    
T  15806531 ggattttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtc-ggattttgaca 15806629  T
Q  446 acaatg 451  Q
    ||||||    
T  15806630 acaatg 15806635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 346 - 451
Target Start/End: Complemental strand, 27676460 - 27676355
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    |||||||  ||||||||||||||| |||||||||| |||| | ||||||||| |||||| |||||||||| |||||| |||||||||| |||||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  446 acaatg 451  Q
    ||||||    
T  27676360 acaatg 27676355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 8560239 - 8560351
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||||||||||||||| || | ||||||| |||||||||    |||||| ||||||||||||||||||||||||||||||||||   ||||||||    
T  8560239 tcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttactcaaggttttttgtag 8560338  T
Q  211 aatcgatatagga 223  Q
    |||| ||||||||    
T  8560339 aatcaatatagga 8560351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 20766673 - 20766793
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaga 200  Q
    |||||| |||||||||||||||||||||||| |  |||||| || |||||||||    |||||||||||||||||||||||||||  ||||||||||||     
T  20766673 atcaaggttgtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaaaattttactcaagg 20766772  T
Q  201 acttttgtagaatcgatatag 221  Q
     |||||| |||||||||||||    
T  20766773 gcttttggagaatcgatatag 20766793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 10872971 - 10873065
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattt 440  Q
    |||||||| |||||||| |||||| |||||||||| |||||||||||||||| ||  |||||||||||||||||||||||||| | |||||||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggatttcaatcgggattt 10873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 350 - 451
Target Start/End: Complemental strand, 17796368 - 17796267
Alignment:
Q  350 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||||||||||| ||||||| ||||| |||| ||| |||||||||||| |||||||||||||||| ||||||| ||||||||| || |||||||||| ||    
T  17796368 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataa 17796269  T
Q  450 tg 451  Q
    ||    
T  17796268 tg 17796267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 350 - 451
Target Start/End: Complemental strand, 19104808 - 19104707
Alignment:
Q  350 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||||||||||| ||||||| ||||| |||| ||| |||||||||||| |||||||||||||||| ||||||| ||||||||| || |||||||||| ||    
T  19104808 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataa 19104709  T
Q  450 tg 451  Q
    ||    
T  19104708 tg 19104707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 10872494 - 10872646
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||| ||| ||||||||  | | |||||||| || ||||| |  | || |||||||||||||||||| ||||||||||||| ||  |||||||    
T  10872494 ttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttactaaactacttttg 10872593  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
     |||||||||||| ||||| ||||||||  |||  ||||||||||||||||||    
T  10872594 aagaatcgatataagaaatcgtaaaatcagaataaaaattgatggattttacc 10872646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 22971155 - 22971044
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||| ||||||||||||| ||   ||||| | |||||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22971155 tcaaaattgggactttacttcaagttaaaagg-agtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 22971057  T
Q  211 aatcgatatagga 223  Q
    ||| ||| |||||    
T  22971056 aattgatgtagga 22971044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 451
Target Start/End: Complemental strand, 17796477 - 17796376
Alignment:
Q  350 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||||||||||| ||||||| ||||| |||| ||| ||||||| |||| ||||||  |||||||| ||||||| |||||||||||| |||||||||||||    
T  17796477 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 17796378  T
Q  450 tg 451  Q
    ||    
T  17796377 tg 17796376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 451
Target Start/End: Complemental strand, 17796586 - 17796485
Alignment:
Q  350 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||  |||||||| ||||||| ||||||| |||  |||||||||||||    
T  17796586 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 17796487  T
Q  450 tg 451  Q
    ||    
T  17796486 tg 17796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 451
Target Start/End: Complemental strand, 19104917 - 19104816
Alignment:
Q  350 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||||||||||| ||||||| ||||| |||| ||| ||||||| |||| ||||||  |||||||| ||||||| |||||||||||| |||||||||||||    
T  19104917 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 19104818  T
Q  450 tg 451  Q
    ||    
T  19104817 tg 19104816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 451
Target Start/End: Complemental strand, 19105026 - 19104925
Alignment:
Q  350 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||  |||||||| ||||||| ||||||| |||  |||||||||||||    
T  19105026 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 19104927  T
Q  450 tg 451  Q
    ||    
T  19104926 tg 19104925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 28136059 - 28135986
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaat 234  Q
    |||||||||||| |||||||||||||||||||||||||  ||||||||| ||| |||||| |||||||||||||    
T  28136059 tcgtaaaatcgctatcaaaatcgaaggattttactcaactacttttgtaaaattgatataagaaattgtaaaat 28135986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 19348900 - 19348788
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||| | ||||||||||| || | ||||||| |||||||||    ||||||||||||||||||||||| ||||||||||| | ||| |||||| ||     
T  19348900 tcaaaattgagactttacttcaagtcaaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatggaaggattttattgaaggacttttataa 19348801  T
Q  211 aatcgatatagga 223  Q
    |||||||||||||    
T  19348800 aatcgatatagga 19348788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 27090797 - 27090677
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||| |||||| || |||||||   | ||||||||||||| ||||||   | |||||| |||||||| ||||||||||||||||||||||| |     
T  27090797 caaggttgtcgaaatcgagattttactttaggtcgaaagggaatagaaaaattgcaaatcgtaagatcgcaataaaaatcgaaggattttactcaaggaa 27090698  T
Q  203 ttttgtagaatcgatatagga 223  Q
    ||||||| |||||||||||||    
T  27090697 ttttgtataatcgatatagga 27090677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 161 - 330
Target Start/End: Original strand, 9152817 - 9152984
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||||| || |||||||||| ||||| ||||||  | ||||||||||||||| || |||||||||||||| ||||| |||| ||| |||||||||    
T  9152817 tcgtaaaatcgtaaccaaaatcgaaagatttgactcaactatttttgtagaatcgat-tatgaaattgtaaaatcacaatcaaaatcgatagattttacc 9152915  T
Q  261 caaaa-aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatc 330  Q
     |||| |   ||||| |||  ||||| |||  ||| ||||||||||||||| || || |||||||||||||    
T  9152916 aaaaacacaataatattaa--atatgctatacatgatatatagtcataaataacttagtttataagaaatc 9152984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 17796887 - 17796771
Alignment:
Q  136 cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatc 235  Q
    |||||||||| || ||||| |  | ||||||||| ||||| |||||||||| |||||||||||  |||||||||||||||  ||| ||||| ||||||||    
T  17796887 cgaaagggaaaagaaaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgtaaaatc 17796790  T
Q  236 gcaatcgaaattgatggat 254  Q
    | |||| ||||||||||||    
T  17796789 gaaatcaaaattgatggat 17796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 19105327 - 19105211
Alignment:
Q  136 cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatc 235  Q
    |||||||||| || ||||| |  | ||||||||| ||||| |||||||||| |||||||||||  |||||||||||||||  ||| ||||| ||||||||    
T  19105327 cgaaagggaaaagaaaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgtaaaatc 19105230  T
Q  236 gcaatcgaaattgatggat 254  Q
    | |||| ||||||||||||    
T  19105229 gaaatcaaaattgatggat 19105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 41671534 - 41671426
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||||||| ||| ||||  | |||||| ||| ||||||||   || | |||||||||||| |||||||||||||||||||||||  ||    
T  41671534 caaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttactcaactac 41671435  T
Q  203 ttttgtaga 211  Q
    |||||||||    
T  41671434 ttttgtaga 41671426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 21553672 - 21553786
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaagg-attttactcaagaactttt 206  Q
    |||| ||||||||||||||||||| |  ||||||||| ||| |||||  | ||| ||  |||||||||||||||||||||  ||||| ||||| ||||||    
T  21553672 ttgtaaaaatcgggactttacttcaaatcgaaagggagtagaaaaatcgggactggt--aatcgcaatcaaaatcgaaggttttttattcaaggactttt 21553769  T
Q  207 gtagaatcgatatagga 223  Q
    ||||||| |||||||||    
T  21553770 gtagaattgatatagga 21553786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 24649522 - 24649588
Alignment:
Q  102 tcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaa 168  Q
    ||||| |||||||||| |||||||||||||  | |||||||||||||||||||| | ||||||||||    
T  24649522 tcaaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaa 24649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 449
Target Start/End: Complemental strand, 28135801 - 28135723
Alignment:
Q  371 ctatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||||||||| ||||  |||| ||||| |||||| |||||||||| |||||| ||||||| |||| |||||||||||||    
T  28135801 ctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 9169942 - 9169869
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcga 184  Q
    |||||||||| |||||||||| || ||||||| | |||||||||| | || |||||||| ||||||||||||||    
T  9169942 tcaaaatcggaactttacttcaagtcgaaaggaagtagcaaaattgggacccgtaaaattgcaatcaaaatcga 9169869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 13006147 - 13006089
Alignment:
Q  136 cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttac 194  Q
    ||||||||||||||||||||   | ||||||||||||||||||||| ||| ||||||||    
T  13006147 cgaaagggaatagcaaaattgaaaatcgtaaaatcgcaatcaaaattgaatgattttac 13006089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 446
Target Start/End: Complemental strand, 42696910 - 42696870
Alignment:
Q  406 caaaatcctggattttaggatttaagtcgggattttgacaa 446  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  42696910 caaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 27055390 - 27055328
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    ||||||||||||||| ||||| ||| | ||||||| || ||| ||||||||||||||| ||||    
T  27055390 tcgtaaaatcgcaattaaaattgaaaggttttactaaaaaacatttgtagaatcgatacagga 27055328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 6861039 - 6861123
Alignment:
Q  229 taaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatga 312  Q
    ||||||||||||| |||| |||||||| |||| ||| |||  |||  |||| |||||||||| ||| || |||||||||||||||    
T  6861039 taaaatcgcaatcaaaatcgatggattctaccaaaacaaaaataaagctaactatatgttataaattgtctatagtcataaatga 6861123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 450
Target Start/End: Complemental strand, 13006019 - 13005927
Alignment:
Q  358 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||||||| | |||||||||| |   ||| |||||||| |||||| ||||||  || |||||   |||||||||| |||||||||||||||    
T  13006019 ttttgggattttgctatggatttgaaatgttaaaggtgaataaagtcgcaaaattatgaattttgaaatttaagtcgagattttgacaacaat 13005927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 102 - 456
Target Start/End: Complemental strand, 4247712 - 4247350
Alignment:
Q  102 tcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaa 201  Q
    ||||| |||||||||| ||||||||||||| || ||||||||||||  |||||| | | ||||||||||||||||||| || |||||||||||||||| |    
T  4247712 tcaagattgtcaaaattgggactttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcaaaggattttactcaagga 4247613  T
Q  202 cttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatata 301  Q
     |||||||||||||||||| |||||  ||||||||||||| |||| ||||||||||||| ||||||  |||||||||||||||||||  |||| ||||||    
T  4247612 tttttgtagaatcgatataagaaatcataaaatcgcaatcaaaatcgatggattttacctaaaaaaaataatactaaatatatgttacaaatgatatata 4247513  T
Q  302 gtcataaatgacctaatttataaga--------aatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaagg 393  Q
    |||||||||||| || |||||||||        |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| |    
T  4247512 gtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaag 4247413  T
Q  394 tgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgt 456  Q
    |||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| |||||    
T  4247412 tgaagaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaattgttgt 4247350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 137 - 451
Target Start/End: Original strand, 24725280 - 24725607
Alignment:
Q  137 gaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcg 236  Q
    |||||| |||||||| ||| | |||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24725280 gaaaggaaatagcaatattggaacttttaaaatcgcaatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcg 24725379  T
Q  237 caatcgaaattgatggattttacccaaaa-----aatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag------ 325  Q
    ||||| |||| ||||||||||||||||||     ||  |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||          
T  24725380 caatcaaaatcgatggattttacccaaaaaaaataaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcg 24725479  T
Q  326 --aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttag 423  Q
      |||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||||||||  |||||| ||||||||||    
T  24725480 tcaaatcgtaatcaaaattgatggattttgcctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttag 24725579  T
Q  424 gatttaagtcgggattttgacaacaatg 451  Q
    |||||||||| |||||||||||||||||    
T  24725580 gatttaagtctggattttgacaacaatg 24725607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 108 - 449
Target Start/End: Complemental strand, 5058878 - 5058530
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgaga-cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaactttt 206  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||  | | ||||||||| ||||||||||||||||||||||| ||||| | ||||    
T  5058878 ttgtcaaaatcgggactttacttc-agatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaatttt 5058780  T
Q  207 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcat 306  Q
    || |||||||||||  ||||||||||||||||||| |||| |||||| |||||| |||||   |||||||||||||||||||| ||||||||||||||||    
T  5058779 gt-gaatcgatataaaaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcat 5058681  T
Q  307 aaatgacctaatttataagaa--------atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaag 398  Q
    ||||||| || ||||||||||        ||||||||||||||||  |||||||| |||||||  |||||||||||||||||| ||||||||||||||||    
T  5058680 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaag 5058581  T
Q  399 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    ||| || |||||| ||| |||||||||||||||||||||||||||||||||    
T  5058580 aaaatcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 108 - 450
Target Start/End: Original strand, 44944624 - 44944978
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgaga-cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaactttt 206  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||    | ||||||||||||||||| |||||||||  |||||||| ||| ||||||    
T  44944624 ttgtcaaaatcgggactttacttc-agatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatcgaacaattttacttaaggactttt 44944722  T
Q  207 gtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcat 306  Q
    |||||||||||||| |||||||||||||||||||| |||| ||| || |||||| |||||   |||||||||||||||||||| ||||||||||||||||    
T  44944723 gtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatagactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcat 44944822  T
Q  307 aaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaag----gt 394  Q
    ||||||| || ||||||||        ||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||||||    ||    
T  44944823 aaatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggattttgactattttaggattctactatggatttgaatcgttgaaggtgagt 44944922  T
Q  395 gaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  44944923 gaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 108 - 412
Target Start/End: Complemental strand, 17811698 - 17811385
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||||||||||||||  | | |||||||||||||||||  | | ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  17811698 ttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttg 17811599  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaat-ttaatactaaatatatgttatgaatggtatatagtcat 306  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||| | ||    
T  17811598 tagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaatattaatattaaatatattttataaatggtatataattat 17811499  T
Q  307 aaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaag 398  Q
    ||||||| || ||||||||        |||||||||||||||||||| |||||||||||||||   |||||||||||||||| ||||||||||||||||     
T  17811498 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaa 17811399  T
Q  399 aaagtcacaaaatc 412  Q
    ||||||||||||||    
T  17811398 aaagtcacaaaatc 17811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 108 - 450
Target Start/End: Complemental strand, 5715631 - 5715290
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||||||||||||    | ||||||| ||||| |||||  | |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  5715631 ttgtcaaaatcgggactttact----gtcgaaaggaaatagaaaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttactcaaggacttttg 5715536  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||    || | | |||||||||||| ||||||||||| |||||    
T  5715535 tagaatcgatataggaaattataaaatcgcaatcaaaatcgatgaattttaccaaaaaa----aaaaatgaatatatgttataaatggtatataatcata 5715440  T
Q  308 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    |||||| || ||||||||||||||        ||||||||||||||| ||||||  |||||||| ||||||||||| |||||||| |||||||||| | |    
T  5715439 aatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtgta-a 5715341  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  5715340 aagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 108 - 444
Target Start/End: Original strand, 20570664 - 20571002
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||||||| ||||||  |  ||||||||||| |||||||   |||| |||||||||||||||||| ||| ||||||||||||| |||||||    
T  20570664 ttgtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcgcaatcaaaattgaaagattttactcaaggacttttg 20570763  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    ||||||||||||| |||||| ||||||| ||||| |||| |||||| |||||| |||||   |||||||||||||||||||| |||||||||||||||||    
T  20570764 tagaatcgatataagaaattataaaatcacaatcaaaatcgatggactttaccaaaaaagaataatactaaatatatgttataaatggtatatagtcata 20570863  T
Q  308 aatgacctaatttataagaaatc--------gcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    |||||| || |||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||| |||||| ||      || ||||||    
T  20570864 aatgacttattttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttttagattctactatagatttaggt------agatgaaga 20570957  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgac 444  Q
    ||||||||||||| ||||||| || ||||||||||||| ||||||    
T  20570958 aagtcacaaaatcttggatttcagaatttaagtcgggagtttgac 20571002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 111 - 451
Target Start/End: Complemental strand, 27221762 - 27221417
Alignment:
Q  111 tcaaaatcgggactttacttcgaga-cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 209  Q
    ||||||||||||||||||||  ||  |||||| | ||||||||||  | | ||||||||||||||||||||||||||||||||||||    |||||||||    
T  27221762 tcaaaatcgggactttacttttaggtcgaaagagtatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgta 27221663  T
Q  210 gaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaa 309  Q
    |||||||| ||||||||||||||||||||||  |||| ||  |||| |||| ||||||    | |||| ||||||||||| |||||||||||||||||||    
T  27221662 gaatcgatgtaggaaattgtaaaatcgcaattaaaatcgactgattgtaccaaaaaaa----aaactatatatatgttataaatggtatatagtcataaa 27221567  T
Q  310 tgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaa 401  Q
    |||| || ||||||||||||||        |||||||||||||||||||||| | |||||  |||||||||||| |||| ||||||||||| ||||||||    
T  27221566 tgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaagattctactatgtatttgagtcgttgaagatgaagaaa 27221467  T
Q  402 gtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||| |||||||||| ||||||| |||||||| |||||||| |||||||||    
T  27221466 gtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaatg 27221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 163 - 451
Target Start/End: Complemental strand, 14055552 - 14055250
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca 262  Q
    |||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||| ||||||| |||||||||||| ||||  |||||||||||| |    
T  14055552 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaa 14055453  T
Q  263 ------aaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatgga 348  Q
          |||||  ||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||        ||||||||||||||| |||||    
T  14055452 caaaaaaaaaagataatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatgga 14055353  T
Q  349 ttttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
    ||||| ||||||| | |||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| ||||||    
T  14055352 ttttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaaca 14055253  T
Q  449 atg 451  Q
    |||    
T  14055252 atg 14055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 163 - 451
Target Start/End: Complemental strand, 14365580 - 14365278
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca 262  Q
    |||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||| ||||||| |||||||||||| ||||  |||||||||||| |    
T  14365580 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaa 14365481  T
Q  263 ------aaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaatcgatgga 348  Q
          |||||  ||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||        ||||||||||||||| |||||    
T  14365480 caaaaaaaaaagataatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatgga 14365381  T
Q  349 ttttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
    ||||| ||||||| | |||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| ||||||    
T  14365380 ttttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaaca 14365281  T
Q  449 atg 451  Q
    |||    
T  14365280 atg 14365278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 161 - 451
Target Start/End: Original strand, 8329876 - 8330175
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||||||||| |||||| ||||| ||||||| |||||| ||||  ||||||||||||    
T  8329876 tcgtaaaatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggattttacc 8329975  T
Q  261 caaaaaatttaatactaaatatatgttat-gaatggtatatagtcataaatgacctaatttataa--------gaaatcgcaatcaaaatcgatggattt 351  Q
     |||||| | |||| ||| ||||||||||  ||||||||||||||||||||||| || |||||||         |||||||||| |||||| ||| ||||    
T  8329976 aaaaaaaataaataataagtatatgttataaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaattt 8330075  T
Q  352 tgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |  |||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| || ||||||| ||||| ||| |||||||||||||||||    
T  8330076 ttcctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaacaatg 8330175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 161 - 448
Target Start/End: Original strand, 8346363 - 8346660
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||| ||||||||||||||| |||||||||||||||  ||||||||||||| |||||| |||||  ||||||| |||||  |||  ||||||||||||    
T  8346363 tcgtaatatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggattttacc 8346462  T
Q  261 caaaaaatt-taatactaaatatatgttatgaa-tggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggatt 350  Q
     |||||||  |||||||||||||||||||| || || ||||||| |||| ||||| || ||||||||||||||        |||| ||||||||||||||    
T  8346463 aaaaaaataataatactaaatatatgttataaaatgatatatagacatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggatt 8346562  T
Q  351 ttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 448  Q
    ||  |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||  ||||| ||| ||||||||||||||    
T  8346563 tttcctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 164 - 450
Target Start/End: Original strand, 21846282 - 21846554
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa 263  Q
    ||||||||||| |||||||||||||||||| ||||  |||||| ||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||    
T  21846282 taaaatcgcaaccaaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaattgatggattttacccaa 21846381  T
Q  264 aaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaatcaaaatcgatggattttgtctattttgg 363  Q
    | ||  ||||| |||||||||||||| |||| |||||||||||||||||| |            |||||||||||||||||| ||||||  || |||| |    
T  21846382 ataa-ataatattaaatatatgttataaatgatatatagtcataaatgactt------------atcgcaatcaaaatcgattgattttacctgttttag 21846468  T
Q  364 gattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
     |||||||||||||| | |||||||||| ||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  21846469 aattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 161 - 454
Target Start/End: Original strand, 8343634 - 8343933
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||  |||||||||||||||| |||||||||||  ||||||||||||| ||||||  |||| |||||||||||||| || |  ||||||||||      
T  8343634 tcgtaaaaatgcaatcaaaatcgaagtattttactcaactacttttgtagaattgatataaaaaatcgtaaaatcgcaatcaaagtcaatggatttta-- 8343731  T
Q  261 caaaaaatttaatactaaatatatgttatgaa-tggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattt 351  Q
     |||||   ||||||||||||||  |||| || ||||||||| ||||| ||||| || ||||||||||||||        |||| ||||| |||||||||    
T  8343732 -aaaaataataatactaaatataacttataaaatggtatataatcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggattt 8343830  T
Q  352 tgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |   ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| | |  ||||||||||||||||    
T  8343831 ttcatattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggatttaggccaagattttgacaacaatg 8343930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 161 - 451
Target Start/End: Original strand, 7730191 - 7730472
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||||||| |||||||||| | ||||||||||  ||||||||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  7730191 tcgtaaaatcgcaaccaaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcgcaatcaaaattgatggattttacc 7730290  T
Q  261 ca-aaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaatcaaaatcgatggattttgtctatt 359  Q
     | |||||   ||||||||||||||||||| ||||  || ||||  || | ||    | |  |||  |||| |||||||||||||||||||||  |||||    
T  7730291 aacaaaaaaaaaatactaaatatatgttataaatg--atttagtt-tataaga----aatcgtaa--aatctcaatcaaaatcgatggatttttcctatt 7730381  T
Q  360 ttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||| |||||||| ||||||| ||| ||| ||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  7730382 ttggaattctactgtggatttgagttgttaaaggtgaagaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaatg 7730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 270 - 450
Target Start/End: Original strand, 24990012 - 24990200
Alignment:
Q  270 taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctatttt 361  Q
    |||||||||||||||||||| ||| ||||||||||||||||||  || ||||||||||||||        |||||||||||||||||||||| |||||||    
T  24990012 taatactaaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctatttt 24990111  T
Q  362 gggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
     |||||||||||||||||| |||||||| |||| |||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||    
T  24990112 aggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaat 24990200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 275 - 454
Target Start/End: Original strand, 26281256 - 26281442
Alignment:
Q  275 ctaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgc--aatc-----aaaatcgatggattttgtctattttgggatt 367  Q
    ||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||   ||||     |||||||||||||||||  |||||||| |||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgttaaatcgcaacaaaatcgatggattttgcttattttggaatt 26281355  T
Q  368 ctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 454  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  26281356 ctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaatggtt 26281442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 318 - 443
Target Start/End: Complemental strand, 8571375 - 8571250
Alignment:
Q  318 tttataagaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctgga 417  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  8571375 tttataagaaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctgga 8571276  T
Q  418 ttttaggatttaagtcgggattttga 443  Q
    ||||| ||||||||||||||||||||    
T  8571275 ttttatgatttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 108 - 266
Target Start/End: Original strand, 24989553 - 24989710
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||||||||||||||||   | |||||||||||| ||||||  | ||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  24989553 ttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggacttttg 24989651  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 266  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  24989652 tagaatcgatataggaaattataaaatcgcaatcaaaatcgatggattttaccaaaaaa 24989710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 326 - 451
Target Start/End: Complemental strand, 39182383 - 39182259
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||    
T  39182383 aaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaatcctagattttagga 39182285  T
Q  426 tttaagtcgggattttgacaacaatg 451  Q
    |||||||| |||||||| ||||||||    
T  39182284 tttaagtcaggattttgtcaacaatg 39182259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 326 - 450
Target Start/End: Original strand, 22687669 - 22687793
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |||||||| ||| ||||||| ||||||||||| |||| ||||| |||||||||    
T  22687669 aaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcgcaaattcctgaattttagga 22687768  T
Q  426 tttaagtcgggattttgacaacaat 450  Q
    |||||||||||||||||||||||||    
T  22687769 tttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 326 - 450
Target Start/End: Complemental strand, 11326510 - 11326386
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    |||||||||||||||||||| ||||||| |||||||  ||||||||||||||||| ||||| ||||||||||||||||| |||||||||  |||||||||    
T  11326510 aaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaatcctaaattttagga 11326411  T
Q  426 tttaagtcgggattttgacaacaat 450  Q
    ||||||| |||||||||||||||||    
T  11326410 tttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 161 - 441
Target Start/End: Complemental strand, 11325275 - 11324988
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||||||||||| |||| |  |||| ||||||||||  |||| |||| ||| ||||||| ||||||||||||  ||||| |||| |||||||||||||    
T  11325275 tcgtaaaatcgcaaccaaatttcaagggttttactcaactacttctgtaaaattgatatag-aaattgtaaaattacaatcaaaatcgatggattttacc 11325177  T
Q  261 caaaaaatttaatactaaatatatgttatgaat----ggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatgga 348  Q
     ||||||   || |||||||||  ||||| |||    |||||||||||||||||||| || ||||||||||||||        ||||||||||  ||| |    
T  11325176 aaaaaaaaaaaa-actaaatat--gttataaataattggtatatagtcataaatgacttagtttataagaaatcgtaaattcgcaatcaaaatt-atgaa 11325081  T
Q  349 ttttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggatttt 441  Q
    ||||| ||||||| | |||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||||||||||    
T  11325080 ttttgcctattttagaattctattatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 9685249 - 9685374
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    |||||||||| ||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||| |||||| |||||||||  |||||||||    
T  9685249 aaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttagga 9685348  T
Q  426 tttaagtcgggattttgacaacaatg 451  Q
    | ||||||| ||||||||||||||||    
T  9685349 tataagtcgagattttgacaacaatg 9685374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 165 - 457
Target Start/End: Original strand, 26617313 - 26617612
Alignment:
Q  165 aaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa 264  Q
    ||||||||||  ||| || ||||||||| |||||  | ||||||||||  ||||||  ||||||||||||||||||| |||| ||| ||||||||  |||    
T  26617313 aaaatcgcaactaaattcaaaggattttgctcaattatttttgtagaaaggatataaaaaattgtaaaatcgcaatcaaaatcgattgattttacaaaaa 26617412  T
Q  265 aaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataaga--------aatcgcaatcaaaatcgatggattttgtct 356  Q
    ||| | ||||||||||||||||||| ||||    ||||||||||||||| || | || ||||        ||||||||||||||||||| ||||||| ||    
T  26617413 aaaat-aatactaaatatatgttataaatg----atagtcataaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattttgcct 26617507  T
Q  357 at--tttgggattctactat--ggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatgg 452  Q
    ||  ||| | ||||||||||  | ||||| ||||||||||||||| |||||| |||||||||| ||||||||||| ||||| | ||||| | ||||||||    
T  26617508 atattttagaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaattttcaaaacaatgg 26617607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 102 - 257
Target Start/End: Complemental strand, 11326639 - 11326484
Alignment:
Q  102 tcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaa 201  Q
    ||||| ||||||||||| | |||||| |||  |  ||||| ||||||||||||| | |||| ||||||| |||||||||| |||| |||||||||||| |    
T  11326639 tcaaggttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttactcaagga 11326540  T
Q  202 cttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttt 257  Q
    ||||||| ||||| |||||||||||||||||||||||||| |||| ||| ||||||    
T  11326539 cttttgtggaatcaatataggaaattgtaaaatcgcaatcaaaatcgatagatttt 11326484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 161 - 313
Target Start/End: Original strand, 26565380 - 26565532
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||||||| |||||  |||| ||||||| |||||| ||||||||||||||||||    
T  26565380 tcgtaaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggattttacc 26565479  T
Q  261 caaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
     ||| |||  ||||  | |||||||||||| ||  |||||||||||||||||||    
T  26565480 aaaacaaaaataat-gttaatatatgttataaactgtatatagtcataaatgac 26565532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 25842513 - 25842625
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||| ||||||||||||| || ||||||||| |||||||||  | ||||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  25842513 tcaaaattgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaattggaggattttactcatgaacttttgtag 25842612  T
Q  211 aatcgatatagga 223  Q
    ||||||| |||||    
T  25842613 aatcgatgtagga 25842625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 39182453 - 39182357
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttt 257  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| | |||| ||||||||||    
T  39182453 tcgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaatcgatataagaaattgtaaaatcgcaaccaaaatcgatggatttt 39182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 8304436 - 8304321
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||||| ||||||||||| || |||||| || |||||||||    |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  8304436 ttgtcaaaatcgagactttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttactcaaggacttttg 8304337  T
Q  208 tagaatcgatatagga 223  Q
    |||||| |||||||||    
T  8304336 tagaattgatatagga 8304321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 9685085 - 9685219
Alignment:
Q  120 ggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatat 219  Q
    ||||||||||||  | ||||| ||||||||||||| |  ||||||||||||||||| |||||||||||||||||||| || |||||| |||||||||| |    
T  9685085 ggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgattt 9685184  T
Q  220 aggaaattgtaaaatcgcaatcgaaattgatggat 254  Q
    || ||||| ||||||| ||||| |||||| |||||    
T  9685185 agaaaattttaaaatcacaatcaaaattgctggat 9685219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 1981107 - 1981217
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||||||||||||||| || ||||||||| ||| |||||| | ||||||||||||| ||||||||||||||||  |||||||||  |||| ||||    
T  1981107 tcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgtaatcaaaatcgaagga--ttactcaaggtctttagtag 1981204  T
Q  211 aatcgatatagga 223  Q
    |||||||||||||    
T  1981205 aatcgatatagga 1981217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 103 - 267
Target Start/End: Complemental strand, 8572491 - 8572329
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||| |||||||||  || || ||||||||||||| || ||| | |||| |||| ||||||||||||||||| ||| ||| ||||| ||    
T  8572491 caaggttgtcaaaattgggactttatctcaagtcgaaagggaatagtaatattgggactcttaaa-tcgcaatcaaaatcgaaagatgttaatcaaggac 8572393  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaa 267  Q
     |||||||||| |||||| |||||| |||||| |||||| ||||  |||||||||||||||||||    
T  8572392 atttgtagaattgatata-gaaattataaaattgcaatcaaaatcaatggattttacccaaaaaa 8572329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 177 - 297
Target Start/End: Original strand, 27509260 - 27509379
Alignment:
Q  177 aaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatact 276  Q
    ||||| ||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||  || | ||| ||||||| ||||||||  |||||||    
T  27509260 aaaattgaaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaataaaattcgattgatttta-ccaaaaaaaataatact 27509358  T
Q  277 aaatatatgttatgaatggta 297  Q
    ||||||||||||| |||||||    
T  27509359 aaatatatgttataaatggta 27509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 168 - 331
Target Start/End: Complemental strand, 6917068 - 6916907
Alignment:
Q  168 atcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaa 267  Q
    |||||||||||||| ||||||||||||||||  |||||  || |||||||||| |||||| |||||| |||||| |||| |||| |||||||| | ||||    
T  6917068 atcgcaatcaaaattgaaggattttactcaactactttcata-aatcgatataagaaattataaaattgcaatcaaaatcgatgaattttaccaacaaaa 6916970  T
Q  268 tttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 331  Q
        ||| |||||||||||||| | ||| ||| ||||||||||||| |||||||||||||||||    
T  6916969 aaatatattaaatatatgttataactggaata-agtcataaatgacttaatttataagaaatcg 6916907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 450
Target Start/End: Complemental strand, 30294275 - 30294175
Alignment:
Q  347 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 446  Q
    ||||||| |||||||| |||| | |||||||||| |||||   |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  30294275 gattttgcctattttgagattttgctatggatttgagtcg---aaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaa 30294179  T
Q  447 caat 450  Q
    ||||    
T  30294178 caat 30294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 8329814 - 8329909
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttac 259  Q
    |||||| ||||||||||| ||||||||||||||||  ||||||||||||| |||||| ||||| |||||||||||||| ||||  | |||||||||    
T  8329814 taaaattgcaatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaatcgcaatcaaaatcaaaggattttac 8329909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 23618211 - 23618317
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||  ||||||||||  ||  |||||||| |||||||||  | ||||  |||||||||||||||||||||| |||||||||||| ||||||||||    
T  23618211 tcaaaatcaagactttactttaagttgaaagggagtagcaaaatcgggactccgaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtag 23618310  T
Q  211 aatcgat 217  Q
    |||||||    
T  23618311 aatcgat 23618317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 1977845 - 1977761
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaat 246  Q
    ||||||||||||||||||||||||||||||||||||||  | |||| ||||||||||||| |||||  ||||||||||||| ||||    
T  1977845 tcgtaaaatcgcaatcaaaatcgaaggattttactcaatta-ttttttagaatcgatataagaaatcctaaaatcgcaatcaaaat 1977761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 4575051 - 4574965
Alignment:
Q  137 gaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    |||||||||||| ||||| |  | |||||||||||||||||||||| ||| ||| |||||||  |||||||||||||||||||||||    
T  4575051 gaaagggaatagtaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaagaattctactcaactacttttgtagaatcgatatagga 4574965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 299
Target Start/End: Complemental strand, 30294538 - 30294404
Alignment:
Q  166 aaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa- 264  Q
    ||||| |||||||||||||||||||||||| ||  |||||| ||||||||||| | |||||  ||||||| ||||| || | ||||||||||||| |||     
T  30294538 aaatcacaatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatcctaaaatcacaatcaaactcgatggattttaccaaaac 30294439  T
Q  265 aaatttaatactaaatatatgttatgaatggtata 299  Q
    |||  ||||  |||||||||||||| ||| |||||    
T  30294438 aaagataatgttaaatatatgttataaattgtata 30294404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 1977776 - 1977707
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtg 395  Q
    ||||||||||||||||||| | ||||||  |||||| |||||||||||||||||| ||||||||||||||    
T  1977776 aaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtg 1977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 364 - 451
Target Start/End: Original strand, 8630001 - 8630088
Alignment:
Q  364 gattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||||||||||| ||||||||||| | |  |||||  ||||||||| |||||| ||| |||||||| ||||||||||||||||    
T  8630001 gattctactatggatttgagtcgttgaagttaagtaaagttgcaaaatcctagattttgggacttaagtcgcgattttgacaacaatg 8630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 8346308 - 8346396
Alignment:
Q  171 gcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttac 259  Q
    |||| |||||||||||||||||||||||  |||||| |||||| |||||| ||||| |||| ||||||||| ||||  | |||||||||    
T  8346308 gcaaacaaaatcgaaggattttactcaactacttttatagaattgatataagaaatcgtaatatcgcaatcaaaatcaaaggattttac 8346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 326 - 430
Target Start/End: Original strand, 27509948 - 27510052
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    |||||||||||||||| |||| |||||| |||||||   |||||||||| ||||| | |||||| | ||||||||| || |||||||||  ||||||| |    
T  27509948 aaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttggatgtgaagaaaatcgcaaaatcctttattttagaa 27510047  T
Q  426 tttaa 430  Q
    |||||    
T  27510048 tttaa 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 21157525 - 21157587
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    |||||||||| |||||||||| ||||||||||| ||||  |||||||||||||| ||||||||    
T  21157525 tcgtaaaatctcaatcaaaattgaaggattttattcaactacttttgtagaatctatatagga 21157587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 26565663 - 26565761
Alignment:
Q  356 tattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggtt 454  Q
    ||||||| |||||| ||||| |||| | ||||| || ||||| ||||| ||||||| ||| |||||| |||||||| | | ||||||||||||||||||    
T  26565663 tattttgagattctgctatgaatttgaatcgttaaaagtgaataaagttacaaaattctgaattttatgatttaaggcagaattttgacaacaatggtt 26565761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 22687099 - 22687164
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaat 226  Q
    |||||||||| ||| |||||| |||| |||||||||||  |||||||||||||||||||| |||||    
T  22687099 tcgtaaaatcacaaccaaaattgaagaattttactcaactacttttgtagaatcgatataagaaat 22687164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 26340212 - 26340263
Alignment:
Q  168 atcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 220  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  26340212 atcgcaatcaaaatcgaagaattttactcaa-aacttttatagaatcgatata 26340263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 446
Target Start/End: Complemental strand, 4574537 - 4574475
Alignment:
Q  384 tcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 446  Q
    |||||||||||||  |||||| |||||| |||||||||||||||||||||  |||||| ||||    
T  4574537 tcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtcatgattttcacaa 4574475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 8629536 - 8629622
Alignment:
Q  137 gaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    |||||||||||| |||||| | |||| ||||| |||||||| ||||  ||  ||||||||||| | |||||||||||||||| ||||    
T  8629536 gaaagggaatagtaaaattgggactcataaaaacgcaatcacaatcagagagttttactcaaggaattttgtagaatcgatacagga 8629622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 10285677 - 10285759
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaa 185  Q
    |||| ||||||||||||||| ||||||||  | |||||| ||| || ||||| |  | |||||||||||||||||||||||||    
T  10285677 caaggttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcgcaatcaaaatcgaa 10285759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 17809440 - 17809493
Alignment:
Q  388 tgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggatttt 441  Q
    |||||||||  ||||||||||||||||| ||||| |||||||||||| ||||||    
T  17809440 tgaaggtgagtaaagtcacaaaatcctgaattttgggatttaagtcgcgatttt 17809493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 26281169 - 26281251
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggatttt 192  Q
    ||||||||||| |||||||||||   | ||||| ||||||||||| | || | ||||||||||||||||||||| ||||||||||    
T  26281169 ttgtcaaaatcaggactttactttaggtcgaaaaggaatagcaaa-tcagga-tcgtaaaatcgcaatcaaaattgaaggatttt 26281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 17741941 - 17741886
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcga 216  Q
    ||||||||| ||||||||||| ||||||||||||| ||  |||||| |||||||||    
T  17741941 tcgtaaaattgcaatcaaaattgaaggattttacttaactacttttttagaatcga 17741886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 17809021 - 17809112
Alignment:
Q  223 aaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
    |||| |||||||||||||| ||||| || |||| |||| ||| |||  |||| ||||||||||||||| ||| | ||||| |||||||||||    
T  17809021 aaatcgtaaaatcgcaatcaaaattcatagattctaccaaaacaaaaataatgctaaatatatgttataaattgcatataatcataaatgac 17809112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 8253991 - 8254039
Alignment:
Q  136 cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcga 184  Q
    ||||||||| |||||||||    ||||||||||||||||||||||||||    
T  8253991 cgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcga 8254039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 352
Target Start/End: Original strand, 22687155 - 22687187
Alignment:
Q  320 tataagaaatcgcaatcaaaatcgatggatttt 352  Q
    |||||||||||||||||||||| ||||||||||    
T  22687155 tataagaaatcgcaatcaaaattgatggatttt 22687187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 1e-95; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 103 - 456
Target Start/End: Original strand, 31237750 - 31238112
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||| ||||||||||||    | ||||||||||| |||||  | |||||||||||||||||||| |||||||||||||||||||| ||    
T  31237750 caagattgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggac 31237849  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatac-taaatatatgttatgaatggtatata 301  Q
    ||||||| ||||||||||| |||||||||||| |||||| |||| ||||||||||||| |||||   |||||| | |||||||||||| |||||||||||    
T  31237850 ttttgtaaaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggattttaccaaaaaataataatacatgaatatatgttataaatggtatata 31237949  T
Q  302 gtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaagg 393  Q
     ||||||||||| || ||||||||        |||||||||||||||||||||||||||  |||||||  |||||||||||| |||| ||||||||||||    
T  31237950 atcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaagg 31238049  T
Q  394 tgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggttgt 456  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  31238050 tgaagaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaacaatgattgt 31238112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 108 - 451
Target Start/End: Complemental strand, 1405133 - 1404782
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||||| ||||||| ||   | | |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1405133 ttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 1405034  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcata 307  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||| |   || ||   || | |||| |||||||||| |||||| ||||||||||    
T  1405033 tagaatcgatataggaaattgtaaaattgcaatcaaaatcgatggatttaaaaaaataataatattcctaagtatatgttataaatggtgtatagtcata 1404934  T
Q  308 aatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaaga 399  Q
    |||||| || | ||||||||||||        ||||||||||||||||||||||  || ||| ||||||||| |||||||||||||||||||||||||||    
T  1404933 aatgacttagtatataagaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaaga 1404834  T
Q  400 aagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  1404833 aagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaatg 1404782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 103 - 451
Target Start/End: Complemental strand, 20064078 - 20063713
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||||| |||||||||  |  ||||||||||||||||||    |||||||||||||||||||||||||||| |||||||||||| ||    
T  20064078 caaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggac 20063979  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt--------taat-actaaatatatgttatgaat 293  Q
    ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| |||||| |        |||| | |||||| |||| || |||    
T  20063978 ttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttaccaaaaaaaataaaataaataataaataaatacatgtgataaat 20063879  T
Q  294 ggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtc 385  Q
    |||||| ||||||||||||  || || |||||        |||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  20063878 ggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtc 20063779  T
Q  386 gttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
     |||||| ||||||||  | ||||| | ||||||||||| ||||||||||||||||||||||||||    
T  20063778 cttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 20063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 150 - 451
Target Start/End: Complemental strand, 36430156 - 36429847
Alignment:
Q  150 aaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattga 249  Q
    |||||| | ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| |  |||   |||||| |||||| |||| ||    
T  36430156 aaaattgggactcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcga 36430057  T
Q  250 tggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaa--------atcgcaatcaaaat 341  Q
    ||||||||||| ||||||   ||||||||||||||||||  |||| ||||||||||||||| || || ||||||||||        ||||||||||||||    
T  36430056 tggattttacctaaaaaaaaaaatactaaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaatcaaaat 36429957  T
Q  342 cgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggatttt 441  Q
    |||||||||||| |||||||| |||||| ||||| | || ||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||    
T  36429956 cgatggattttgcctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggatttt 36429857  T
Q  442 gacaacaatg 451  Q
    ||||||||||    
T  36429856 gacaacaatg 36429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 163 - 449
Target Start/End: Original strand, 35565788 - 35566082
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggatttta---ctcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttac 259  Q
    ||||||||||||  |||||||||||||||||   |||||  |||||||||||||||||||| |||||  ||||||| ||||| |||| ||||||||||||    
T  35565788 gtaaaatcgcaactaaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaatcataaaatcacaatcaaaatcgatggattttac 35565887  T
Q  260 ccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatc--------gcaatcaaaatcgatggattt 351  Q
    | ||||||   ||||||||||||||||||| ||| ||||||||||||||||||| |  |||||||||||||        |||||||||||||||||||||    
T  35565888 caaaaaaa---aatactaaatatatgttataaattgtatatagtcataaatgactttgtttataagaaatcgtaaaactgcaatcaaaatcgatggattt 35565984  T
Q  352 tgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    || ||||||||||||||||| |||||||| |||| |||||  ||||||||||| |||||||||| |||||  ||||||||| ||||||||||||||||    
T  35565985 tgcctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 164 - 451
Target Start/End: Original strand, 15588690 - 15588979
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa 263  Q
    ||||||||||| |||||||||||||||||||||||  ||||  |||| ||||||||| |||||| ||||||||||||| |||| ||||||||||||| ||    
T  15588690 taaaatcgcaaccaaaatcgaaggattttactcaattacttc-gtaggatcgatataagaaattataaaatcgcaatcaaaatcgatggattttaccaaa 15588788  T
Q  264 aaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttgtc 355  Q
    ||||  ||||||||||||||||  || ||||||||||| ||||||||||| || |||||| |        |||||||||| |||| |||| |||||||||    
T  15588789 aaaa--taatactaaatatatg--ataaatggtatataatcataaatgacttagtttatatgaaatcgtaaaatcgcaataaaaaacgattgattttgtc 15588884  T
Q  356 tattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||| |||||||||||| |||| ||| ||||||||||||||||| | |||||||||| |||||| || ||||||||||||||||||| |||||    
T  15588885 tattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcgggattttgacagcaatg 15588979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 30433165 - 30432984
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    |||||||||||||||| |||||||  | ||||| | ||||| |||||  | |||| |||||||||||||||||||||| ||||||||||||| ||||||     
T  30433165 ttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttactcaaggactttta 30433066  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttat 289  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||    
T  30433065 tagaatcgatataggaaattgtaaaatcgcaatcaaaatagatggattttaccccaaaaaattaatactaaatatatgttat 30432984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 103 - 298
Target Start/End: Original strand, 19262090 - 19262285
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||| ||||||| |||||||||| || |||| ||||||||||||||  | ||||||||||||||||||||||||||| ||||||||||||| ||    
T  19262090 caaggttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttactcaaggac 19262189  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtat 298  Q
    |||||||||||||||||| |||||||||||||||||||| |||| || ||| |||||| |||||   ||||||||| |||||||||| ||||||||    
T  19262190 ttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgacggactttaccaaaaaataataatactaactatatgttataaatggtat 19262285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 223 - 448
Target Start/End: Complemental strand, 31578238 - 31578007
Alignment:
Q  223 aaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttat 322  Q
    ||||||||||||||||||   ||| ||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  31578238 aaattgtaaaatcgcaattataatcgatggattttaaccaaaaaaat-aatactaaatatatgttataaatggtatatagtcataaatgacttagtttat 31578140  T
Q  323 aagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcct 414  Q
    || ||||||        |||||||||| |||||||||||  |||||| ||||||||||| |||||||| |||||||||||||||||| || ||||||| |    
T  31578139 aataaatcgtaaaattgcaatcaaaattgatggattttgcttattttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatctt 31578041  T
Q  415 ggattttaggatttaagtcgggattttgacaaca 448  Q
      ||||||  ||||||||||||||||||||||||    
T  31578040 aaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 284 - 451
Target Start/End: Complemental strand, 30432593 - 30432418
Alignment:
Q  284 tgttatgaatggtatatagtcataaatgacctaatttataagaaatcg--------caatcaaaatcgatggattttgtctattttgggattctactatg 375  Q
    |||||| ||||||||||||| ||||||||| || ||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||    
T  30432593 tgttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatg 30432494  T
Q  376 gatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||| |||||||||||| ||||||||||  |||||||| |||||||| |||||| || |||||||||||||||||    
T  30432493 gatttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaatg 30432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 23863326 - 23863451
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||| |||||| || |||||||| |    
T  23863326 aaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattttagaa 23863425  T
Q  426 tttaagtcgggattttgacaacaatg 451  Q
    ||||||||||||||||||||||||||    
T  23863426 tttaagtcgggattttgacaacaatg 23863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 108 - 313
Target Start/End: Original strand, 25538924 - 25539130
Alignment:
Q  108 ttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttg 207  Q
    ||||||||||||| ||||||| ||  | ||||||||||||| |||||  |  ||||||||||||||||||||||  |||||||||||| ||  |||||||    
T  25538924 ttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttactgaactacttttg 25539023  T
Q  208 tagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcat 306  Q
    |||||||||||||  |||||||||||| |||||| |||| ||| ||||||||| ||| | |  |||| |||||||||||||||  || ||||||||||||    
T  25539024 tagaatcgatataaaaaattgtaaaattgcaatcaaaatcgatagattttaccaaaacagaaataatgctaaatatatgttatatattgtatatagtcat 25539123  T
Q  307 aaatgac 313  Q
    |||||||    
T  25539124 aaatgac 25539130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 27523881 - 27523990
Alignment:
Q  114 aaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaat 213  Q
    |||||||||||||||||| || ||||||||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 27523980  T
Q  214 cgatatagga 223  Q
    |||| |||||    
T  27523981 cgatgtagga 27523990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 974686 - 974573
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagta-ctcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 209  Q
    |||| |||||||||||||||| || ||||||||| |||||||||  | | |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  974686 tcaatatcgggactttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgta 974587  T
Q  210 gaatcgatatagga 223  Q
    ||||||||||||||    
T  974586 gaatcgatatagga 974573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 20034004 - 20034110
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||||||||||||||| || ||||||||| |||||||||    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  20034004 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtag 20034103  T
Q  211 aatcgat 217  Q
    |||||||    
T  20034104 aatcgat 20034110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 326 - 448
Target Start/End: Original strand, 25539231 - 25539353
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagga 425  Q
    |||||||| |||||||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||||||||| |  |||| || || |||||||||    
T  25539231 aaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttgaattttagga 25539330  T
Q  426 tttaagtcgggattttgacaaca 448  Q
    ||||| |||||||||| ||||||    
T  25539331 tttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 326 - 450
Target Start/End: Complemental strand, 19491980 - 19491855
Alignment:
Q  326 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattt--tag 423  Q
    |||||||||||||||||||||||||||  ||||||||| ||||| |||||||||| ||||||| ||| ||||||||||| ||||||||| |||||  |||    
T  19491980 aaatcgcaatcaaaatcgatggattttacctattttgg-attctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttatag 19491882  T
Q  424 gatttaagtcgggattttgacaacaat 450  Q
    ||||||| ||| |||||||||||||||    
T  19491881 gatttaattcgagattttgacaacaat 19491855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 21869102 - 21869212
Alignment:
Q  110 gtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 209  Q
    |||||||||||||||||||||| || ||||||||||||| |||||  | |||| |||||||||||| ||||||||||||||||| ||||  |||||||||    
T  21869102 gtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggattttattcaatgacttttgta 21869201  T
Q  210 gaatcgatata 220  Q
    |||||||||||    
T  21869202 gaatcgatata 21869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 167 - 331
Target Start/End: Original strand, 1690566 - 1690730
Alignment:
Q  167 aatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaaaa 266  Q
    |||||||| ||||| ||||||| |||||| ||  ||||||||  |||||||||| ||| | |||||||||||||| |||| |||  |||||||| |||||    
T  1690566 aatcgcaaccaaaagcgaaggaatttactgaactacttttgttaaatcgatataagaattcgtaaaatcgcaatcaaaatcgataaattttaccaaaaaa 1690665  T
Q  267 atttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 331  Q
       ||||| ||||||||| |||| ||||||||||||||||||| ||| || ||||||||||||||    
T  1690666 taataatattaaatatattttataaatggtatatagtcataaaagacttagtttataagaaatcg 1690730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 344 - 452
Target Start/End: Original strand, 1690785 - 1690893
Alignment:
Q  344 atggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttga 443  Q
    |||| ||||| ||||||||||||| |||||||||| | |||||| ||||||||||||||||||||||||||  |||||| ||||||||||||  ||||||    
T  1690785 atgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttga 1690884  T
Q  444 caacaatgg 452  Q
    |||||||||    
T  1690885 caacaatgg 1690893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 19245944 - 19245824
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| ||||||||||||||| ||| |||| ||  |||||||||||||||||| |  | |||||||||||||||||||||| |||||||||||| ||  ||    
T  19245944 caaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactac 19245845  T
Q  203 ttttgtagaatcgatatagga 223  Q
    |||||||||||||||||||||    
T  19245844 ttttgtagaatcgatatagga 19245824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 7302129 - 7302023
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||||||||||||||| ||  ||| |||  |||||||||  | ||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  7302129 tcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgtag 7302030  T
Q  211 aatcgat 217  Q
    |||||||    
T  7302029 aatcgat 7302023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 164 - 313
Target Start/End: Complemental strand, 16767079 - 16766930
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa 263  Q
    |||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||| ||||| |||||||||||||| ||||  | ||| |||||| ||    
T  16767079 taaaatcgcaatcaaaattgaaggattttactcaactacttttatagaatcgatataagaaatcgtaaaatcgcaatcaaaatcaaagga-tttaccaaa 16766981  T
Q  264 a-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
    | |||  |||| |||||||| |||||| ||| ||||| |||||||||||||    
T  16766980 acaaaaataatgctaaatatttgttataaattgtatacagtcataaatgac 16766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 161 - 294
Target Start/End: Original strand, 13502505 - 13502639
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    ||||||||||| ||||||||| ||||||| ||| ||||  | |||||||||||| ||||| ||||| |||||||||||||| |||| |||||||||||||    
T  13502505 tcgtaaaatcgtaatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcgcaatcaaaatcgatggattttacc 13502604  T
Q  261 caaa-aaatttaatactaaatatatgttatgaatg 294  Q
     ||| |||  ||||| |||||||||||||| ||||    
T  13502605 aaaacaaaaataatattaaatatatgttataaatg 13502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 161 - 313
Target Start/End: Complemental strand, 27407088 - 27406935
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacc 260  Q
    |||||| ||||||||||||||| ||| |||||||||||  ||||||| | |||| ||||| |||||  ||||||||||||| |||||||||||||| |||    
T  27407088 tcgtaatatcgcaatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatcaaaattgatggatttcacc 27406989  T
Q  261 caaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
     ||| |||  |||| |||||||||| |||| ||  ||||||||| |||||||||    
T  27406988 aaaacaaaaataatgctaaatatatattataaactgtatatagtaataaatgac 27406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 99 - 310
Target Start/End: Complemental strand, 8428581 - 8428369
Alignment:
Q  99 gaatcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaa 198  Q
    |||| ||| ||||||||||||||| ||| |||   | ||||||||||||| ||||| |  | |  ||||||||||||||||||||||||||||| |||||    
T  8428581 gaattaaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggattttgctcaa 8428482  T
Q  199 gaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggta 297  Q
      | |||||||||||| ||||   |||| |||||||||||||  |||| |||| ||| |||| ||| |||  |||| |||| ||||| |||| |||  ||    
T  8428481 ctatttttgtagaatcaatatcaaaaatcgtaaaatcgcaatacaaatcgatgaattataccaaaacaaaaataatgctaactatatattataaattata 8428382  T
Q  298 tatagtcataaat 310  Q
    |||||||||||||    
T  8428381 tatagtcataaat 8428369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 34578210 - 34578124
Alignment:
Q  137 gaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    |||||||| |||||||||  | |||| |||||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||    
T  34578210 gaaagggagtagcaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcatggacttttgtagaatcgatgtagga 34578124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 348 - 451
Target Start/End: Complemental strand, 17995157 - 17995054
Alignment:
Q  348 attttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaac 447  Q
    |||||| ||||||||| ||| | ||| | |||| ||||||||| |||||| ||| || |||||| |||||||||||| |||||||||| ||||| |||||    
T  17995157 attttgcctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaac 17995058  T
Q  448 aatg 451  Q
    ||||    
T  17995057 aatg 17995054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 347 - 453
Target Start/End: Original strand, 5395674 - 5395780
Alignment:
Q  347 gattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaa 446  Q
    ||||||| |||||||| |||||| |||||||||| |||| || ||| |||| |||||| |||||||||  |||||| |||||| |||   ||||||||||    
T  5395674 gattttgcctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaa 5395773  T
Q  447 caatggt 453  Q
    |||||||    
T  5395774 caatggt 5395780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 451
Target Start/End: Complemental strand, 15266187 - 15266081
Alignment:
Q  345 tggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgac 444  Q
    ||||||||  ||||||||| ||| ||  |||||||| | || |||||| |||| ||||| ||||||||||| |||||||||||||| ||  |||||||||    
T  15266187 tggatttttcctattttggaattataacatggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgac 15266088  T
Q  445 aacaatg 451  Q
    |||||||    
T  15266087 aacaatg 15266081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 34841816 - 34841728
Alignment:
Q  223 aaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaat 310  Q
    |||| |||||||||||||| |||| |||||||| || ||||| |||  ||||| |||||||||||||| ||| ||||||||||||||||    
T  34841816 aaatcgtaaaatcgcaatcaaaatcgatggattctatccaaacaaaaataataataaatatatgttataaattgtatatagtcataaat 34841728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 356 - 450
Target Start/End: Complemental strand, 16766804 - 16766710
Alignment:
Q  356 tattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||| ||||||| |||||||||| | |||||||||||||| ||| ||  ||||||||  |||||| ||||||||||   ||||||||||||||    
T  16766804 tattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 19492168 - 19492079
Alignment:
Q  223 aaattgtaaaatcgcaatcgaaattgatggattttacccaaaaaatt--taatactaaatatatgttatgaatggtatatagtcataaat 310  Q
    |||| |||||| || |||| |||| ||||||||||||| |||||| |  |||| ||||||||||||||| ||| ||||||||||||||||    
T  19492168 aaatcgtaaaaccgtaatcaaaatcgatggattttaccaaaaaaaataataatgctaaatatatgttataaattgtatatagtcataaat 19492079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 31023325 - 31023259
Alignment:
Q  348 attttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcct 414  Q
    |||||| ||||||| ||||||||||||| |||| |||||||||| ||||| |||||| |||||||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcct 31023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 27749281 - 27749396
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgaga-cgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaag 199  Q
    |||||||||||||||||| | | |||||||| ||| ||||||| | ||| ||||| |  | |||||||||||||||| |||| ||| || ||||||||||    
T  27749281 atcaagtttgtcaaaatcagtattttacttc-agatcgaaaggaattagtaaaatgacaaatcgtaaaatcgcaatctaaattgaatgagtttactcaag 27749379  T
Q  200 aacttttgtagaatcga 216  Q
     | ||||||||||||||    
T  27749380 gatttttgtagaatcga 27749396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 451
Target Start/End: Complemental strand, 15627715 - 15627654
Alignment:
Q  390 aaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||| |||  ||||||||| |  |||||||||||||||||||||||||||||| ||||    
T  15627715 aaggtgaataaaaccacaaaatcataaattttaggatttaagtcgggattttgacaataatg 15627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 450
Target Start/End: Complemental strand, 29660938 - 29660893
Alignment:
Q  405 acaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||    
T  29660938 acaaaatcctagattttaggatttaagtcggatttttgacaacaat 29660893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 29661166 - 29661093
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaat 234  Q
    |||||||| |||||| ||||||||||| ||||| | ||  |||||||||| ||||||||| ||||| |||||||    
T  29661166 tcgtaaaaccgcaattaaaatcgaaggtttttattaaactacttttgtagtatcgatataagaaatcgtaaaat 29661093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 5395384 - 5395515
Alignment:
Q  190 tttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgtta 288  Q
    |||||||||  |||||| ||||||||||||| |||||  ||||||  ||||| |||| ||  ||||||||| ||| |||  ||||  | || ||||||||    
T  5395384 tttactcaattactttt-tagaatcgatataagaaatcttaaaattacaatcaaaatcgaaagattttaccaaaacaaaaataatgttcaaaatatgtta 5395482  T
Q  289 tgaatggtatatagtcataaatgacctaattta 321  Q
    | ||| |||||||||||||||||||| ||||||    
T  5395483 taaattgtatatagtcataaatgacccaattta 5395515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 19245196 - 19245152
Alignment:
Q  407 aaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||    
T  19245196 aaaatcctgaattttaaaatttaagtcgggattttgacaacaatg 19245152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 450
Target Start/End: Original strand, 19257568 - 19257647
Alignment:
Q  371 ctatggatttaagtcgttgaaggtgaag-aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||||| |||| ||||||||||| | ||| ||||||| |||||| |||||||||||| |||||||| |||||||| ||||||    
T  19257568 ctatgaatttgagtcgttgaag-tcaagtaaagtcataaaatcttggattttaggacttaagtcgcgattttgataacaat 19257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 451
Target Start/End: Original strand, 27750194 - 27750282
Alignment:
Q  363 ggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||  ||||||||| ||||||| ||| | |  |||||| ||||||| || ||||| ||| |||||||| ||||||||||||||||    
T  27750194 ggattctgttatggatttgagtcgtttaagttaagaaaagtcgcaaaatcttgtattttgggacttaagtcgcgattttgacaacaatg 27750282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 34841648 - 34841592
Alignment:
Q  358 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcct 414  Q
    |||||| ||||| |||||||||| |||||||||||||||| |||||| || ||||||    
T  34841648 ttttggtattctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcct 34841592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 31023531 - 31023450
Alignment:
Q  229 taaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaa 309  Q
    |||||||| |||| |||| ||||||||||||| ||| |||  ||||  |||||||||||||| ||| ||| |||||||||||    
T  31023531 taaaatcgtaatcaaaatcgatggattttaccaaaataaaaataatgttaaatatatgttataaatagtaaatagtcataaa 31023450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 15628039 - 15627991
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtaga 211  Q
    ||||||| | ||||||||||||||| ||||||||||  |||||||||||    
T  15628039 gtaaaatggaaatcaaaatcgaaggtttttactcaactacttttgtaga 15627991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 140; Significance: 5e-73; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 142 - 454
Target Start/End: Original strand, 7268 - 7588
Alignment:
Q  142 ggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatc 241  Q
    |||||||||||||    ||| ||||||||| ||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||    
T  7268 ggaatagcaaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatc 7367  T
Q  242 gaaattgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag--------aaatcgca 333  Q
     |||| |||| |||||||| |||||   |||||||||||||||||| | | ||||||||| |||||||| || |  ||||||||        ||||||||    
T  7368 aaaatcgatgaattttaccaaaaaacaataatactaaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcgtaaaatcgca 7467  T
Q  334 atcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtc 433  Q
    || |||||||||| |||||| ||||||| ||||||||||||||||||   ||||||||||| ||||||||| |||||||||| ||||||| |||||||||    
T  7468 attaaaatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtc 7567  T
Q  434 gggattttgacaacaatggtt 454  Q
    |||||| | ||||||||||||    
T  7568 gggattctaacaacaatggtt 7588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 138; Significance: 8e-72; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 163 - 451
Target Start/End: Original strand, 93539 - 93834
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca 262  Q
    ||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||||||  |||| |||||||||||||| |||| ||||||||||||| |    
T  93539 gtaaaatcgtaatcaaaatcgaaggattttattcaactacttttgtagaatcgatataataaatcgtaaaatcgcaatcaaaatcgatggattttaccaa 93638  T
Q  263 aaaaatttaatactaaatatatgttatgaatggtata-tagtcataaatgacctaatttataag--------aaatcgcaatcaaaatcgatggattttg 353  Q
    ||| |  || ||||||||||||||||||||| ||||| |||||||||| ||| ||||||| |||        |||||||||||||||||||||||||| |    
T  93639 aaacaaatattactaaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatggatttcg 93738  T
Q  354 tctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
     ||||||| | ||||| |||||||||| ||| ||||| |||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||||    
T  93739 cctattttagaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtcgggattttgacaacaatg 93834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 93602 - 93635
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttac 194  Q
    |||||||||||||||||||||||| |||||||||    
T  93602 tcgtaaaatcgcaatcaaaatcgatggattttac 93635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 102; Significance: 3e-50; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 103 - 287
Target Start/End: Original strand, 56199 - 56384
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||| |||||||||||  | |||||||||||||||||||    ||   |||||||||||||||||||||||||||||||||||| ||    
T  56199 caaggttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttactcaaggac 56298  T
Q  203 ttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttaccca-aaaaatttaatactaaatatatgtt 287  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| | |||||   |||||||||||||||||    
T  56299 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaacaaaaaaaaaatactaaatatatgtt 56384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 58736 - 58784
Alignment:
Q  283 atgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 331  Q
    ||||||| | ||||||||||||||||||||  || ||||||||||||||    
T  58736 atgttataagtggtatatagtcataaatgatttagtttataagaaatcg 58784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 83; Significance: 6e-39; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 164 - 313
Target Start/End: Original strand, 8794 - 8944
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa 263  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||| ||| |||||||||||||||| |||| ||||||||||||| ||    
T  8794 taaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatagatataagaacttgtaaaatcgcaatcaaaatcgatggattttaccaaa 8893  T
Q  264 a-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
    | |||  |||| ||||||||||||||| | | |||||||||||||||||||    
T  8894 acaaagataatgctaaatatatgttataagttgtatatagtcataaatgac 8944  T

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Target: scaffold0603; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 350 - 451
Target Start/End: Original strand, 9049 - 9150
Alignment:
Q  350 tttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaa 449  Q
    |||| ||||||  ||||| | |||||||||| |||||||||||||||| ||| ||||||||||||  ||||||  |||||| || |||||||||||||||    
T  9049 tttgcctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaa 9148  T
Q  450 tg 451  Q
    ||    
T  9149 tg 9150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 71; Significance: 8e-32; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 105 - 231
Alignment:
Q  326 aaatcgcaatcaaaatcgatggatttt-gtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttagg 424  Q
    ||||| ||||||||||||||||||||| | ||||||| | ||| |||||||||||| |||||||||| |||||||||||| |||||||||| ||||||||    
T  105 aaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttagg 204  T
Q  425 atttaagtcgggattttgacaacaatg 451  Q
    |||||||||||||| ||  ||||||||    
T  205 atttaagtcgggatcttatcaacaatg 231  T

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Target: scaffold0510; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 36 - 131
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttt 257  Q
    ||||||||||| || |||||||||||||||||||||||  ||||| |||||||||||||| |||||||||||||| ||||| |||| ||||||||||    
T  36 tcgtaaaatcgaaaccaaaatcgaaggattttactcaactacttt-gtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggatttt 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 14708 - 14820
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtag 210  Q
    ||||||||||| ||||||||| || ||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  14708 tcaaaatcggggctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttattcaaagacttttgtag 14807  T
Q  211 aatcgatatagga 223  Q
    ||||||| |||||    
T  14808 aatcgatgtagga 14820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 451
Target Start/End: Original strand, 15096 - 15176
Alignment:
Q  371 ctatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    |||||||||| ||||||||||| |  | |||||||||||| || | |||||  || |||||||||| |||||| |||||||    
T  15096 ctatggatttgagtcgttgaagctacacaaagtcacaaaaaccagaattttgagacttaagtcgggtttttgataacaatg 15176  T

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Target: scaffold0017 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 38301 - 38420
Alignment:
Q  103 caagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaac 202  Q
    |||| |||||||||||||||||||||||| || ||||||| |||||||||||  | ||||||||||| |||||| | |||||||||||||||||| | ||    
T  38301 caaggttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaattgcaatc-agatcgaaggattttactcatggac 38399  T
Q  203 ttttgtagaatcgatatagga 223  Q
    ||||||||||||||| |||||    
T  38400 ttttgtagaatcgatgtagga 38420  T

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Target: scaffold0061 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 76081 - 76202
Alignment:
Q  101 atcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaga 200  Q
    |||||| |||||||||||||||||||||||| || ||||||| |||||||||    | ||||||||||| ||||| || |||||||||||||||||||      
T  76081 atcaaggttgtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaattgcaat-aagatcgaaggattttactcaaag 76179  T
Q  201 acttttgtagaatcgatatagga 223  Q
    ||||||||||||||||| |||||    
T  76180 acttttgtagaatcgatgtagga 76202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 446
Target Start/End: Original strand, 1932 - 2032
Alignment:
Q  347 gattttgtctattttgg-gattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    ||||||||||||||| | |||||| |||||||||| ||||||| ||| |    |||||| ||||  |||||||||| ||| |||||||  ||||||||||    
T  1932 gattttgtctatttttgagattctgctatggatttgagtcgttaaagctacgcaaagtcgcaaacacctggattttgggacttaagtctcgattttgaca 2031  T
Q  446 a 446  Q
    |    
T  2032 a 2032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 446
Target Start/End: Original strand, 7443 - 7543
Alignment:
Q  347 gattttgtctattttgg-gattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    ||||||||||||||| | |||||| |||||||||| ||||||| ||| |    |||||| ||||  |||||||||| ||| |||||||  ||||||||||    
T  7443 gattttgtctatttttgagattctgctatggatttgagtcgttaaagctacgcaaagtcgcaaacacctggattttgggacttaagtctcgattttgaca 7542  T
Q  446 a 446  Q
    |    
T  7543 a 7543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 990 - 887
Alignment:
Q  138 aaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgc 237  Q
    |||||||| |||||||||   | ||||||||| |||||||||||||||| |||||||||||  ||||||||||||  |||||| ||||||||||||||||    
T  990 aaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgc 891  T
Q  238 aatc 241  Q
    ||||    
T  890 aatc 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 8514 - 8391
Alignment:
Q  100 aatcaagtttgtcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaag 199  Q
    ||||||| || |||||||||||| |||||||  || ||||||||| ||| |||||| | |||| |||||| ||| |||||||||||||||||||||||||    
T  8514 aatcaaggttatcaaaatcgggagtttactttaagtcgaaagggagtagtaaaattgggactcataaaattgcagtcaaaatcgaaggattttactcaag 8415  T
Q  200 aacttttgtagaatcgatatagga 223  Q
     | || |||||||| |||||||||    
T  8414 gagttgtgtagaattgatatagga 8391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 8373 - 8289
Alignment:
Q  228 gtaaaatcgcaatcgaaattgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 313  Q
    |||||||||||||| |||| || ||||| |||| ||| |||| |||||||||||||||| ||| ||| | |||||||||||||||||    
T  8373 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaatataatactaaatatatg-tataaattgcatatagtcataaatgac 8289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 54; Significance: 1e-21; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 358 - 451
Target Start/End: Original strand, 48825 - 48918
Alignment:
Q  358 ttttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 451  Q
    ||||||||||||  ||||||||| |||||||||||||||| |||||  |||||| || |||||||||||||||||||| ||||| |||||||||    
T  48825 ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaatg 48918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 61146 - 61243
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggatttta 258  Q
    |||||||||| ||||||||||||||| |||||||| ||  |||||||||||||||||||| ||||| ||||||||| || | |||| |||||| ||||    
T  61146 tcgtaaaatcacaatcaaaatcgaagaattttacttaactacttttgtagaatcgatatatgaaatcgtaaaatcgtaaccaaaatcgatggacttta 61243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 48497 - 48597
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaattgatggattttacccaa 263  Q
    ||||||| |||||||||||||||||||||||| ||  |||||||||||||||||| | ||| | |||||||||| ||| |||| |||||| |||| ||||    
T  48497 taaaatctcaatcaaaatcgaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcgatggactttatccaa 48596  T
Q  264 a 264  Q
    |    
T  48597 a 48597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 132945 - 133009
Alignment:
Q  159 actcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  132945 actcgtaaaatcgcaatcaaaatcgaaggattttcctcaaggacttttgtagaatcgatgtagga 133009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 175 - 81
Alignment:
Q  111 tcaaaatcgggactttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttt 205  Q
    ||||||||||||||||||||| || | ||||||| |||||||||  | ||||||||||| | ||| ||||||||||||||||||||||| |||||    
T  175 tcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttactcaaggacttt 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 145885 - 145826
Alignment:
Q  161 tcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 220  Q
    ||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||    
T  145885 tcgtaaaatagcaatcaaaatcgaaggattttactcacttacttttgtagaatcgatata 145826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 24722 - 24621
Alignment:
Q  122 actttacttcgagacgaaagggaatagcaaaattagtactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatag 221  Q
    |||||||||| || ||||||||| |||||||||  | ||||||||||| | |||||||||| || ||||||||||||    ||||||||||||||| |||    
T  24722 actttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaattgtaatcaaaatcaaaagattttactcaaatttttttgtagaatcgatgtag 24623  T
Q  222 ga 223  Q
    ||    
T  24622 ga 24621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 33233 - 33176
Alignment:
Q  163 gtaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 220  Q
    |||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  33233 gtaaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgatata 33176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 346 - 451
Target Start/End: Original strand, 37191 - 37296
Alignment:
Q  346 ggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgaca 445  Q
    |||||||  |||||||  |||||| |||||||||| ||| |||||||||||| ||| |  |||||| ||| ||||||  ||||||||||| |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  446 acaatg 451  Q
    ||||||    
T  37291 acaatg 37296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 142923 - 142864
Alignment:
Q  164 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    |||||||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||||    
T  142923 taaaatcgcaattaaaattgaaggattttactcaaggagttttgtagaatagatatagga 142864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 450
Target Start/End: Original strand, 35103 - 35188
Alignment:
Q  365 attctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 450  Q
    ||||||| ||| |||| ||||||| |||||||| |||||  ||||||  || ||||||| |||||||||| |||||||||||||||    
T  35103 attctacaatgaatttgagtcgttaaaggtgaataaagttccaaaattatgaattttagaatttaagtcgagattttgacaacaat 35188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 626 - 568
Alignment:
Q  165 aaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatatagga 223  Q
    ||||||||||| ||||||||  ||| |||||| || ||||||||||||| |||||||||    
T  626 aaaatcgcaattaaaatcgagtgatgttactcgaggacttttgtagaattgatatagga 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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