View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18580_low_26 (Length: 359)
Name: NF18580_low_26
Description: NF18580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18580_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 19 - 350
Target Start/End: Original strand, 34976884 - 34977232
Alignment:
| Q |
19 |
gataaaacactgacaatgaaaataattgtaacacacatatcaatcacccagacatatcttcaatctaaagtgtttgtacgata----------------- |
101 |
Q |
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| T |
34976884 |
gataaaacactgacaatgaaaataattgtaacacacatatcaatcacccagacatatcttcaatctaaagtgtctgtacgataacttaaccaatacaata |
34976983 |
T |
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| Q |
102 |
tacaaaaatcacatttgtgtaaataaaagatctattttaatatgatactatcattgtatagttcatttcctcctcatacacagcaacatgattaaaaaca |
201 |
Q |
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| T |
34976984 |
tacaaaaatcacatttgtgtaaataaaagatctattttaatatgatactatcattgtatagttcatttcctcctcatacacagcaacatgattaaaaaca |
34977083 |
T |
|
| Q |
202 |
ttgaatattcatcattttatacctcgacaaaatttacaagaggaaaacagaaagttaaatattaccttgaccaagcttaaatttgaaagtggtaccccta |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
34977084 |
ttgaatattcatcattttatacctcgacaaaatttacaagaggaaaacagaaagttaaatattaccttgaccaagcttaaacttgaaagtggtaccccta |
34977183 |
T |
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| Q |
302 |
tcacggctcgagtcaaatttggttccatcaagcaaaattccagtataat |
350 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34977184 |
tcacggctcgagtcaaatttggttccatcaagcaaaattccagtataat |
34977232 |
T |
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