View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18582_low_7 (Length: 314)

Name: NF18582_low_7
Description: NF18582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18582_low_7
NF18582_low_7
[»] chr1 (7 HSPs)
chr1 (164-251)||(15647788-15647875)
chr1 (105-153)||(42283840-42283888)
chr1 (94-145)||(19966072-19966123)
chr1 (110-153)||(25449426-25449469)
chr1 (105-153)||(22153021-22153070)
chr1 (97-148)||(15284424-15284476)
chr1 (105-153)||(22637458-22637506)
[»] chr4 (10 HSPs)
chr4 (83-148)||(15736019-15736085)
chr4 (71-153)||(20243274-20243357)
chr4 (94-145)||(26621526-26621576)
chr4 (105-153)||(22676427-22676475)
chr4 (105-153)||(44397403-44397451)
chr4 (94-140)||(11449829-11449876)
chr4 (114-155)||(13929826-13929867)
chr4 (105-153)||(3792527-3792575)
chr4 (105-153)||(22089478-22089526)
chr4 (102-147)||(43357521-43357568)
[»] scaffold0004 (1 HSPs)
scaffold0004 (105-153)||(210603-210651)
[»] chr8 (6 HSPs)
chr8 (105-153)||(22672968-22673016)
chr8 (105-153)||(33052187-33052235)
chr8 (105-153)||(17287075-17287124)
chr8 (105-153)||(30422342-30422391)
chr8 (105-153)||(9767964-9768012)
chr8 (105-156)||(13431530-13431582)
[»] chr3 (12 HSPs)
chr3 (105-153)||(11073624-11073672)
chr3 (105-153)||(15902393-15902441)
chr3 (106-153)||(11067442-11067489)
chr3 (114-153)||(16305963-16306002)
chr3 (105-143)||(11222753-11222791)
chr3 (114-148)||(14063962-14063996)
chr3 (114-155)||(14006877-14006918)
chr3 (105-153)||(14954607-14954656)
chr3 (105-153)||(22770765-22770814)
chr3 (105-153)||(11189191-11189239)
chr3 (105-153)||(13698556-13698604)
chr3 (105-148)||(21639192-21639236)
[»] chr5 (10 HSPs)
chr5 (96-153)||(19642706-19642764)
chr5 (105-155)||(28465239-28465289)
chr5 (105-155)||(30742133-30742183)
chr5 (105-154)||(6513323-6513374)
chr5 (105-153)||(26120712-26120760)
chr5 (105-155)||(9088172-9088224)
chr5 (105-153)||(33021845-33021894)
chr5 (105-153)||(90327-90375)
chr5 (93-153)||(22820552-22820615)
chr5 (105-148)||(42242816-42242860)
[»] scaffold0171 (1 HSPs)
scaffold0171 (94-154)||(5908-5969)
[»] chr2 (7 HSPs)
chr2 (102-143)||(13892027-13892068)
chr2 (102-143)||(14032152-14032193)
chr2 (85-144)||(9851477-9851537)
chr2 (165-232)||(25888924-25888991)
chr2 (105-155)||(22316795-22316845)
chr2 (106-148)||(31968632-31968674)
chr2 (94-145)||(1583008-1583060)
[»] chr7 (9 HSPs)
chr7 (105-153)||(8182153-8182201)
chr7 (108-154)||(16033133-16033180)
chr7 (105-155)||(3779536-3779586)
chr7 (105-153)||(16557524-16557573)
chr7 (105-153)||(16608089-16608138)
chr7 (105-153)||(21691617-21691668)
chr7 (105-153)||(33604099-33604148)
chr7 (105-153)||(8932954-8933002)
chr7 (106-153)||(9802129-9802177)
[»] chr6 (6 HSPs)
chr6 (105-153)||(22801339-22801387)
chr6 (105-153)||(14101349-14101398)
chr6 (107-148)||(11704499-11704542)
chr6 (105-154)||(15532535-15532586)
chr6 (105-154)||(17380756-17380807)
chr6 (105-148)||(32335033-32335077)
[»] scaffold0043 (1 HSPs)
scaffold0043 (106-153)||(2619-2666)
[»] scaffold0471 (1 HSPs)
scaffold0471 (105-153)||(2651-2700)
[»] scaffold0014 (1 HSPs)
scaffold0014 (108-156)||(112791-112840)
[»] scaffold0007 (1 HSPs)
scaffold0007 (107-153)||(59959-60007)
[»] scaffold0525 (1 HSPs)
scaffold0525 (105-153)||(7054-7102)
[»] scaffold0009 (1 HSPs)
scaffold0009 (105-153)||(83494-83542)


Alignment Details
Target: chr1 (Bit Score: 72; Significance: 9e-33; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 15647788 - 15647875
Alignment:
Q  164 aagaagatgagcaacaactaacaaggaaatgataagtggtcattaaacaaaagacaagttgatcaagaagcaaagtctttggtcaacg 251  Q
    |||||||||||||||||||||||||||||| | |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  15647788 aagaagatgagcaacaactaacaaggaaataacaagtggtcatcaaacataagacaagttgatcaagaagcaaagtctttggtcaacg 15647875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 42283888 - 42283840
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||  |||||||||||||||| |||||||||||||||||| ||||    
T  42283888 gaaaaagttaacacacttcaacccccttcttgtgtttttctcaccttca 42283840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 19966072 - 19966123
Alignment:
Q  94 agaaaaagtttgaaaaagccaacacacttcaacccctttcttgtgtttttct 145  Q
    ||||||||||||||||||  |||||| ||||||||| ||| |||||||||||    
T  19966072 agaaaaagtttgaaaaaggtaacacaattcaacccccttcatgtgtttttct 19966123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 25449426 - 25449469
Alignment:
Q  110 agccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||    
T  25449426 agccaacacaattcaacccccttcttgtgtttttctcaccttca 25449469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 22153070 - 22153021
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||| ||||    
T  22153070 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 22153021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 15284476 - 15284424
Alignment:
Q  97 aaaagtttgaaaaa-gccaacacacttcaacccctttcttgtgtttttctcac 148  Q
    |||||||||||||| || |||||| |||||||| ||| |||||||||||||||    
T  15284476 aaaagtttgaaaaaagctaacacaattcaacccatttattgtgtttttctcac 15284424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 22637506 - 22637458
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    ||||||||||| | | ||||||||| |||||||||||||||||| ||||    
T  22637506 gaaaaagccaatataattcaacccccttcttgtgtttttctcaccttca 22637458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 15736085 - 15736019
Alignment:
Q  83 gtgaaatactaagaaaaagtttgaaaaagccaacacacttcaa-cccctttcttgtgtttttctcac 148  Q
    |||||| ||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  15736085 gtgaaacacttagaaaatgtttgaaaaagccaacacaattcaaccccctttcttgtgtttttctcac 15736019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 20243357 - 20243274
Alignment:
Q  71 agactctgatcggtgaaatactaagaaaaagtttgaaaaagccaacacacttcaacccc--tttcttgtgtttttctcacattca 153  Q
    ||||||||||| |||||| ||| |||||||||||||||||  ||| ||| |||||||||  |||||||| |||||||||||||||    
T  20243357 agactctgatcagtgaaa-acttagaaaaagtttgaaaaattcaatacaattcaacccccttttcttgtatttttctcacattca 20243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 26621526 - 26621576
Alignment:
Q  94 agaaaaagtttgaaaaagccaacacacttcaacccctttcttgtgtttttct 145  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  26621526 agaaaaagattgaaaaagccaacacacttcaacccc-ttcttgtatttttct 26621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 22676427 - 22676475
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| |||| |||| |||||||||||||||||| ||||    
T  22676427 gaaaaagccaacacaattcaccccccttcttgtgtttttctcaccttca 22676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 44397451 - 44397403
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||| ||||    
T  44397451 gaaaaagccaacacaattcaacccccttcttatgtttttctcaccttca 44397403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 11449829 - 11449876
Alignment:
Q  94 agaaaaagtttgaaaaagccaacacacttcaacc-cctttcttgtgtt 140  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||    
T  11449829 agaaaaagtttgaaaaagccaacacaattcaacctcccttcttgtgtt 11449876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 13929826 - 13929867
Alignment:
Q  114 aacacacttcaacccctttcttgtgtttttctcacattcata 155  Q
    |||||| ||||||||| |||||||||||||||||| ||||||    
T  13929826 aacacaattcaacccccttcttgtgtttttctcactttcata 13929867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 3792575 - 3792527
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| |||||||||  ||||| ||||||||||| ||||    
T  3792575 gaaaaagccaacacaattcaacccccgtcttgcgtttttctcaccttca 3792527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 22089526 - 22089478
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||  |||||| ||||||||| |||||||||||||||||| ||||    
T  22089526 gaaaaagttaacacaattcaacccccttcttgtgtttttctcaccttca 22089478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 43357568 - 43357521
Alignment:
Q  102 tttgaaaaagccaacacacttcaacccct--ttcttgtgtttttctca 147  Q
    ||||||||| |||||||| ||||||||||  |||||||||||||||||    
T  43357568 tttgaaaaaaccaacacatttcaacccctccttcttgtgtttttctca 43357521  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 210651 - 210603
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  210651 gaaaaagccaacacaattcaacccccttcttgtgtttttctcaccttca 210603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000007; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 22673016 - 22672968
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  22673016 gaaaaagccaacacaattcaacccccttcttgtgtttttctcaccttca 22672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 33052235 - 33052187
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||| |||||| ||||||||||||| |||||||||||||| ||||    
T  33052235 gaaaaagctaacacaattcaacccctttcctgtgtttttctcactttca 33052187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 17287075 - 17287124
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||| ||||    
T  17287075 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 17287124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 30422342 - 30422391
Alignment:
Q  105 gaaaaagccaacacacttcaacccct-ttcttgtgtttttctcacattca 153  Q
    |||||||| |||||| |||||||||| |||||||||||||||||| ||||    
T  30422342 gaaaaagcaaacacaattcaacccctcttcttgtgtttttctcaccttca 30422391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 9767964 - 9768012
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||  |||||| ||||||||| |||||||||||||||||| ||||    
T  9767964 gaaaaagaaaacacaattcaacccccttcttgtgtttttctcaccttca 9768012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 13431530 - 13431582
Alignment:
Q  105 gaaaaagccaacacacttcaacccct-ttcttgtgtttttctcacattcatag 156  Q
    |||||||| |||||| |||||||||  |||||||||||||||||| |||||||    
T  13431530 gaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcatag 13431582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 11073672 - 11073624
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  11073672 gaaaaagccaacacaattcaacccccttcttgtgtttttctcaccttca 11073624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 15902441 - 15902393
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||| |||||| ||||||||| |||||||||||||||||| ||||    
T  15902441 gaaaaagctaacacaattcaacccccttcttgtgtttttctcaccttca 15902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 11067489 - 11067442
Alignment:
Q  106 aaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||||||||| ||||||| | |||||||||||||||||| ||||    
T  11067489 aaaaagccaacacaattcaacctccttcttgtgtttttctcaccttca 11067442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 153
Target Start/End: Original strand, 16305963 - 16306002
Alignment:
Q  114 aacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  16305963 aacacaattcaacccctttcttgtatttttctcacattca 16306002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 11222791 - 11222753
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgttttt 143  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  11222791 gaaaaagccaacacaattcaacccccttcttgtgttttt 11222753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 148
Target Start/End: Original strand, 14063962 - 14063996
Alignment:
Q  114 aacacacttcaacccctttcttgtgtttttctcac 148  Q
    |||||| ||||||||||||||||||||||||||||    
T  14063962 aacacaattcaacccctttcttgtgtttttctcac 14063996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 14006918 - 14006877
Alignment:
Q  114 aacacacttcaacccctttcttgtgtttttctcacattcata 155  Q
    |||||| ||||||||| |||||||||||||||||| ||||||    
T  14006918 aacacaattcaacccccttcttgtgtttttctcaccttcata 14006877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 14954656 - 14954607
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||| ||||    
T  14954656 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 14954607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 22770765 - 22770814
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattca 153  Q
    |||||||| |||||||||||| |||| |||||||||||||||||| ||||    
T  22770765 gaaaaagctaacacacttcaaccccccttcttgtgtttttctcaccttca 22770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 11189239 - 11189191
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||| |||||||| |||||| || |||||||||||||||||| ||||    
T  11189239 gaaaaaaccaacacaattcaacacccttcttgtgtttttctcaccttca 11189191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 13698604 - 13698556
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||| |||||| ||||||||| ||||| |||||||||||| ||||    
T  13698604 gaaaaagctaacacaattcaaccccattcttatgtttttctcaccttca 13698556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 21639192 - 21639236
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcac 148  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||    
T  21639192 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcac 21639236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 19642706 - 19642764
Alignment:
Q  96 aaaaagtttgaaaaagccaacacacttcaacccct-ttcttgtgtttttctcacattca 153  Q
    |||| ||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||    
T  19642706 aaaatgtttgaaaaagccaacacaattcatcccctcttcttgtgtttttctcaccttca 19642764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 28465239 - 28465289
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattcata 155  Q
    ||||||||||||||| ||||||||| ||||||||||||||| || ||||||    
T  28465239 gaaaaagccaacacaattcaacccccttcttgtgtttttcttaccttcata 28465289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 30742183 - 30742133
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattcata 155  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||| ||||||    
T  30742183 gaaaaagtcaacacaattcaacccccttcttgtgtttttctcaccttcata 30742133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 6513323 - 6513374
Alignment:
Q  105 gaaaaagccaacacacttcaacccct--ttcttgtgtttttctcacattcat 154  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||| |||||    
T  6513323 gaaaaagccaacacaattcaacccctccttcttgtgtttttctcaccttcat 6513374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 26120712 - 26120760
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||| |||||| ||||||||| |||||||||||||||||| ||||    
T  26120712 gaaaaagctaacacaattcaacccccttcttgtgtttttctcaccttca 26120760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 9088224 - 9088172
Alignment:
Q  105 gaaaaagccaacacacttcaacccct--ttcttgtgtttttctcacattcata 155  Q
    ||||||||||||||| |||||||| |  |||||||||||||||||| ||||||    
T  9088224 gaaaaagccaacacaattcaacccttccttcttgtgtttttctcaccttcata 9088172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 33021894 - 33021845
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||| ||||    
T  33021894 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 33021845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 90327 - 90375
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||| |||||| ||||||| | |||||||||||||||||| ||||    
T  90327 gaaaaagctaacacaattcaacctcattcttgtgtttttctcaccttca 90375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 22820615 - 22820552
Alignment:
Q  93 aagaaaaagttt-gaaaaagccaacacacttcaac--ccctttcttgtgtttttctcacattca 153  Q
    |||||||||||| ||||||||||||||| ||||||  ||  || ||||||||||||||||||||    
T  22820615 aagaaaaagttttgaaaaagccaacacagttcaacatcctctttttgtgtttttctcacattca 22820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 42242860 - 42242816
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcac 148  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||    
T  42242860 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcac 42242816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 5969 - 5908
Alignment:
Q  94 agaaaaagtttgaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattcat 154  Q
    ||||||||||||||||| |||| ||| ||||| |||||||||||||||||| |||| |||||    
T  5969 agaaaaagtttgaaaaatccaatacagttcaaccccctttcttgtgtttttttcaccttcat 5908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 13892068 - 13892027
Alignment:
Q  102 tttgaaaaagccaacacacttcaacccctttcttgtgttttt 143  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  13892068 tttgaaaaagccaacacaattcaacccccttcttgtgttttt 13892027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 14032193 - 14032152
Alignment:
Q  102 tttgaaaaagccaacacacttcaacccctttcttgtgttttt 143  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  14032193 tttgaaaaagccaacacaattcaacccccttcttgtgttttt 14032152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 9851537 - 9851477
Alignment:
Q  85 gaaatactaagaaaaagtttgaaaaagccaacacacttcaac-ccctttcttgtgtttttc 144  Q
    |||||||||||||||||||||||| || ||||||| |||||| | | ||||||||||||||    
T  9851537 gaaatactaagaaaaagtttgaaagagtcaacacaattcaactctccttcttgtgtttttc 9851477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 25888991 - 25888924
Alignment:
Q  165 agaagatgagcaacaactaacaaggaaatgataagtggtcattaaacaaaagacaagttgatcaagaa 232  Q
    |||||| ||||||||||| |  ||||||||| |||||||||| ||||| | ||||| |||||||||||    
T  25888991 agaagacgagcaacaacttaagaggaaatgacaagtggtcatcaaacacatgacaaattgatcaagaa 25888924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 22316845 - 22316795
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattcata 155  Q
    |||||||| |||| | ||||||||| |||||||||||||||||| ||||||    
T  22316845 gaaaaagctaacagaattcaacccccttcttgtgtttttctcaccttcata 22316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 31968632 - 31968674
Alignment:
Q  106 aaaaagccaacacacttcaacccctttcttgtgtttttctcac 148  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||    
T  31968632 aaaaagctaacacaattcaacccccttcttgtgtttttctcac 31968674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 1583060 - 1583008
Alignment:
Q  94 agaaaaagtttgaaaaagccaacacacttcaacc-cctttcttgtgtttttct 145  Q
    |||||||||||  ||||||||||||| ||||||| || |||||||||||||||    
T  1583060 agaaaaagtttagaaaagccaacacaattcaacctcccttcttgtgtttttct 1583008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 8182201 - 8182153
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||| ||||    
T  8182201 gaaaaaggcaacacaattcaacccccttcttgtgtttttctcaccttca 8182153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 16033180 - 16033133
Alignment:
Q  108 aaagccaacacacttcaacccct-ttcttgtgtttttctcacattcat 154  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||||    
T  16033180 aaagccaacacaattcaacccctcttcttgtgtttttctcaccttcat 16033133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 3779536 - 3779586
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattcata 155  Q
    |||||||| |||||| ||||||||| ||||| |||||||||||| ||||||    
T  3779536 gaaaaagctaacacaattcaacccccttcttatgtttttctcaccttcata 3779586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 16557524 - 16557573
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||| ||||    
T  16557524 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 16557573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 16608138 - 16608089
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||| ||||    
T  16608138 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 16608089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 21691668 - 21691617
Alignment:
Q  105 gaaaaagccaacacacttcaacccc---tttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| |||||||||   ||||||||||||||||||| ||||    
T  21691668 gaaaaagccaacacaattcaaccccccctttcttgtgtttttctcaccttca 21691617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 33604148 - 33604099
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||| ||||    
T  33604148 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 33604099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 8933002 - 8932954
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||  |||||| ||||||||| |||||||||||||||||| ||||    
T  8933002 gaaaaagaaaacacaattcaacccccttcttgtgtttttctcaccttca 8932954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 9802177 - 9802129
Alignment:
Q  106 aaaaagccaacacacttcaacccct-ttcttgtgtttttctcacattca 153  Q
    |||||||||||||| ||||||||||  ||||||||||||||||| ||||    
T  9802177 aaaaagccaacacaattcaacccctaatcttgtgtttttctcaccttca 9802129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 22801387 - 22801339
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||| |||||| ||||||||| |||||||||||||||||| ||||    
T  22801387 gaaaaagctaacacaattcaacccccttcttgtgtttttctcaccttca 22801339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 14101349 - 14101398
Alignment:
Q  105 gaaaaagccaacacacttcaacccc-tttcttgtgtttttctcacattca 153  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||| ||||    
T  14101349 gaaaaagctaacacaattcaaccccctttcttgtgtttttctcaccttca 14101398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 11704542 - 11704499
Alignment:
Q  107 aaaagccaacacacttcaacccct--ttcttgtgtttttctcac 148  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||    
T  11704542 aaaagccaacacaattcaacccctacttcttgtgtttttctcac 11704499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 15532535 - 15532586
Alignment:
Q  105 gaaaaagccaacacacttcaacccctt--tcttgtgtttttctcacattcat 154  Q
    |||||||| |||||| |||||||||||  ||||||||||||||||| |||||    
T  15532535 gaaaaagctaacacaattcaaccccttcttcttgtgtttttctcaccttcat 15532586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 17380807 - 17380756
Alignment:
Q  105 gaaaaagccaacacacttcaacccct--ttcttgtgtttttctcacattcat 154  Q
    ||||||||||||||| |||||||||   |||||||||||||||||| |||||    
T  17380807 gaaaaagccaacacaattcaacccccccttcttgtgtttttctcaccttcat 17380756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 32335077 - 32335033
Alignment:
Q  105 gaaaaagccaacacacttcaacccc-tttcttgtgtttttctcac 148  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||    
T  32335077 gaaaaagctaacacaattcaaccccctttcttgtgtttttctcac 32335033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 2619 - 2666
Alignment:
Q  106 aaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    ||||||| |||||| ||||||||| ||||||| |||||||||||||||    
T  2619 aaaaagctaacacaattcaacccccttcttgtatttttctcacattca 2666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 2700 - 2651
Alignment:
Q  105 gaaaaagccaacacacttcaa-cccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||| ||||    
T  2700 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca 2651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 112791 - 112840
Alignment:
Q  108 aaagccaacacacttcaacccc-tttcttgtgtttttctcacattcatag 156  Q
    ||||| |||||| ||||||||| ||||||||||||||||||| |||||||    
T  112791 aaagcaaacacaattcaaccccctttcttgtgtttttctcaccttcatag 112840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 59959 - 60007
Alignment:
Q  107 aaaagccaacacacttcaac--ccctttcttgtgtttttctcacattca 153  Q
    ||||||||||||| ||||||  |||||||||||||||||||||| ||||    
T  59959 aaaagccaacacaattcaacacccctttcttgtgtttttctcaccttca 60007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 7102 - 7054
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||  |||||| ||||||||| |||||||||||||||||| ||||    
T  7102 gaaaaagaaaacacaattcaacccccttcttgtgtttttctcaccttca 7054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 83542 - 83494
Alignment:
Q  105 gaaaaagccaacacacttcaacccctttcttgtgtttttctcacattca 153  Q
    |||||||| |||||| ||||||| | |||||||||||||||||| ||||    
T  83542 gaaaaagctaacacaattcaacctcattcttgtgtttttctcaccttca 83494  T

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