View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18583_low_44 (Length: 239)
Name: NF18583_low_44
Description: NF18583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18583_low_44 |
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Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 223
Target Start/End: Complemental strand, 5024619 - 5024409
Alignment:
| Q |
13 |
atcatcaagtaacaaggtttaccgcagtgatcctactgatggaatgtcagttgtcaagcttggcaggcaagcaacaaaaggcagtccagcaatcaaacat |
112 |
Q |
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| T |
5024619 |
atcatcaggtaacaaggtttaccgcagtgatcctactgatggaatgtcagttgtcaagcttggcaggcaagcaacaaaaggcagtccagcaatcaaacat |
5024520 |
T |
|
| Q |
113 |
gtcaaagatcctattagtcctccctttcattcagtggatagaagtaataggatgagaacttcaaaattgatgcaatcctcaaaagttcctcgagtcatca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5024519 |
gtcaaagatcctattagtcctccctttcattcagtggatagaagtaataggatgagaacttcaaaattgatgcaatcctcaaaagttcctcgagtcatca |
5024420 |
T |
|
| Q |
213 |
atggagaaaac |
223 |
Q |
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||||||||||| |
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| T |
5024419 |
atggagaaaac |
5024409 |
T |
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