View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18583_low_9 (Length: 448)
Name: NF18583_low_9
Description: NF18583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18583_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 35 - 430
Target Start/End: Original strand, 22762146 - 22762541
Alignment:
| Q |
35 |
gataaaatttgtgcgatcagaagttacggtccaataaattgagaagcttatgagcaaaaccgaaaggtccgtagagcaatttcctacatttccgtgcttg |
134 |
Q |
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| T |
22762146 |
gataaaatttgtgcgatcagaaattacggtccaataaattgagaagcttatgagcaaaactgaaaggtccgtagagtaatttcctacatttccgtgcttg |
22762245 |
T |
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| Q |
135 |
atttggcttaagcatcttagtcgtcaataagatggattgatttgctaggtaatgtcaaattattttattaaaatatgacaacaaaaatatatataagtat |
234 |
Q |
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| T |
22762246 |
atttggcttaagcatcttagtcgtcaataagatggattgatttgttaggtaatgtcaaattattttattaaaatatgacaacaaaaatatatataagtat |
22762345 |
T |
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| Q |
235 |
tatttcttcattaatatgatggnnnnnnnactagtcaagtgttaatggttagtctcataaaaaattatgaagtcataagtagtgaacaacatatccatcc |
334 |
Q |
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| T |
22762346 |
tatttcttcattaatatgatggtttttttactagtcaagtattaatggttagtctcataaaaaattatgaagtcataagtagtgaacaacatatccatcc |
22762445 |
T |
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| Q |
335 |
aataagtagtgaaaaacatccaatcataaacaatatcgtaataatccaatgttatctttacttaggcaagaattttgattcattaaaaagttgtac |
430 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22762446 |
aataagtagtgaaaaacatccaatcataaacaatgtcgtaataatccaatgttatctttacttaggcaagaattttgattcattaaaaagttgtac |
22762541 |
T |
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