View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18584_high_15 (Length: 248)
Name: NF18584_high_15
Description: NF18584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18584_high_15 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 6846427 - 6846665
Alignment:
| Q |
10 |
atgaatgaaagagataatgttgcttggaattctttgattttaggatatttgaagaatgataagattgagaaaggtgtttatctatttattgaaatgatgt |
109 |
Q |
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| T |
6846427 |
atgaatgaaagagataatgttgcttggaattctttgattttaggatatttgaagaatgataagattgagaaaggtgtttatctatttattgaaatgatgt |
6846526 |
T |
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| Q |
110 |
gggttggttttacaccaaccgtatacacattttgtatgattttgagtgcatgtagtcgtctgaaagattatttttctgggagattgattcatgcacgtgt |
209 |
Q |
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| T |
6846527 |
gggttggttttacaccaaccgtatacacattttgtatgattttgagtgcatgtagtcgtctgaaagattatttttctgggagattgattcatgcacgtgt |
6846626 |
T |
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| Q |
210 |
aattgtcaggaatgtgtcgccggatttacatctgcagaa |
248 |
Q |
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| T |
6846627 |
aattgtcgggaatgtgtcgccggatttacatctgcagaa |
6846665 |
T |
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