View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18584_low_22 (Length: 226)
Name: NF18584_low_22
Description: NF18584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18584_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 24 - 208
Target Start/End: Complemental strand, 42640753 - 42640570
Alignment:
| Q |
24 |
taaactaatttacagagattttgacctccgcaaattgatttgtaaggacacctaagttacccttgtcacaatttattttcaggggtttctaccaataaat |
123 |
Q |
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| T |
42640753 |
taaactaatttacagagattttgacctccacaaattgattcgtaaggacacctaagttacccttgtcacaatttattttcaggggtttctaccaataaat |
42640654 |
T |
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| Q |
124 |
aaatcaaaacatttaagacattattaattccaaccgatcaacttgaatcacttaattgtacttgtatccgtaacagataatatat |
208 |
Q |
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|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
42640653 |
-aatcaaaacattcaagacattaataattccaaccgatcaacttgaatcacttaattgtacttgtatccgtaacagatcatatat |
42640570 |
T |
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