View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18584_low_24 (Length: 221)
Name: NF18584_low_24
Description: NF18584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18584_low_24 |
 | |
|
| [»] scaffold1415 (1 HSPs) |
| | |
|
| [»] scaffold0070 (2 HSPs) |
| | |
|
| [»] scaffold0830 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 212
Target Start/End: Complemental strand, 25605808 - 25605612
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25605808 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
25605709 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatgatg |
212 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
25605708 |
ttaactggtgttattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctaatgatg |
25605612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 25696531 - 25696338
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
25696531 |
gcagaatctctccttagcagataataaactgaatggttcagttcccaaatcacttggtgaaatggtaagcttgatctctttggacttgtcccaaaatatg |
25696432 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25696431 |
ttaactggtgttattccaaaatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
25696338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 25323827 - 25323634
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||| || |||||||||||||||||| |||||||| |
|
|
| T |
25323827 |
gcagaatctctccttagcagataataaactgaatggttcaattcccaaatcacttggtgaaatggtaagattaatctctttggacttgtccaaaaatatg |
25323728 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25323727 |
ttaacaggtgttattccaaaatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
25323634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 25454141 - 25453964
Alignment:
| Q |
28 |
cttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactggtgct |
127 |
Q |
| |
|
||||||| | |||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
25454141 |
cttagcacaaaataaactgattggatcaattcccaaatcacttggtcaaatggtaagcttgatctctttggacttgtcccaaaatatgttaactggtgtt |
25454042 |
T |
|
| Q |
128 |
attccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcct |
205 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
25454041 |
attccaaaatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagaatcct |
25453964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 16 - 209
Target Start/End: Original strand, 24874353 - 24874546
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||| |||||||| || |||||||| ||||||| ||||||| |||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
24874353 |
gcagaatctctccttggctcataataaattgaatgggccaattcccacatcacttggtaaaatgataagcttaatctccttggacttgtcccaaaatatg |
24874452 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
|||| |||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24874453 |
ctaacaggtgctgttcccaaatccttagaatcacttgtgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
24874546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 16 - 205
Target Start/End: Complemental strand, 25312170 - 25311981
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||| ||||||||||| |||||||| ||||||| |||||||| | |||||| | |||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
25312170 |
gcagaatctctccttagctcataataaattgaatgggtcaattcccgcatcactgaatggaatgttaagcttgatctctttggacttgtctcaaaatatg |
25312071 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcct |
205 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25312070 |
ttaactggtgttattccaaaatccttagaatcacttttgtaccttcaaaacatcaacttctcatataatagattacaaggagagattcct |
25311981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 16 - 205
Target Start/End: Complemental strand, 25342151 - 25341962
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||| ||||||||||| |||||||| ||||||| |||||||| | |||||| | |||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
25342151 |
gcagaatctctccttagctcataataaattgaatgggtcaattcccgcatcactgaatggaatggtaagcttgatctctttggacttgtctcaaaatatg |
25342052 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcct |
205 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25342051 |
ttaactggtgttattccaaaatccttagaatcacttttgtaccttcaaaacatcaacttctcatataatagattacaaggagagattcct |
25341962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 25716354 - 25716171
Alignment:
| Q |
26 |
tccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactggtg |
125 |
Q |
| |
|
|||||||| |||| ||| |||||||||||||||| ||||||| || ||||| |||||||| |||||||||||||||||||||||||| || ||||| |
|
|
| T |
25716354 |
tccttagctcataacaaattgaatggatcaattccctcatcacttagtgaaatggtaagcttggtctctttggacttgtcccaaaatatgctagatggtg |
25716255 |
T |
|
| Q |
126 |
ctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25716254 |
ttattccaaaatccttagaatcacttttgtaccttcaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
25716171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 36 - 209
Target Start/End: Complemental strand, 25476812 - 25476639
Alignment:
| Q |
36 |
ataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactggtgctattccaaa |
135 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||| ||||| | ||||||| ||| ||||||||||||||||||||| |||| ||| ||||||||| |
|
|
| T |
25476812 |
ataacaaactgaatggatcaattccatcatcacttggtgaaatggtgagcttgacctccttggacttgtcccaaaatatgctaaccggtattattccaaa |
25476713 |
T |
|
| Q |
136 |
atccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25476712 |
atccttagaatcacttttgtatcttgaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
25476639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 25571054 - 25570861
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||| ||||||||||| |||| ||| ||||||| |||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25571054 |
gcagaatctctccttagctcataacaaattgaatgggtcaattcccacatcacttggtgaaatggtaagcttgatctccttggacttgtcccaaaatatg |
25570955 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
|| |||||| ||||||||| || |||||||||||| |||| || || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25570954 |
ctagctggtgttattccaaagtcattagaatcacttttgtaccttcagaacatcaacttctcatataatagattacaaggagagattcctgatg |
25570861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 25392463 - 25392331
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
25392463 |
gcagaaactctccttagcagataataaactgaatggatcaattcccaaatcaattggtcaaatggtaagcttgatctctttggacttgtcccaaaatatg |
25392364 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatca |
148 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
25392363 |
ttaactggtgttattccaaaatccttagaatca |
25392331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 22899747 - 22899892
Alignment:
| Q |
64 |
atcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactggtgctattccaaaatccttagaatcacttgtgtatctccaa |
163 |
Q |
| |
|
|||||||||| ||||||| | |||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||||| | | |
|
|
| T |
22899747 |
atcacttggtgaaatgattaacttgttctctttggacttgtcccaaaatatgataactggtgttattccaaaatccttagcatcgcttttgtatcttcga |
22899846 |
T |
|
| Q |
164 |
aacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
|||||||| || |||||||||||| ||||||||||||||||||||| |
|
|
| T |
22899847 |
aacatcaatttatcatataatagactacaaggagagattcctgatg |
22899892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 23259353 - 23259167
Alignment:
| Q |
23 |
ctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactg |
122 |
Q |
| |
|
|||||||||||| | |||| || |||||||||||||| |||||||||| | |||||||||||||| || || ||| ||||| |||||||| ||| | |
|
|
| T |
23259353 |
ctctccttagcacacaatatgctaaatggatcaattcccacatcacttggtaacatgataagcttgatatccttagacatgtccgaaaatatgctaatcg |
23259254 |
T |
|
| Q |
123 |
gtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
|| |||||||||||| |||||||||||| |||| || |||||||| ||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
23259253 |
gtattattccaaaatcattagaatcacttttgtaccttcaaaacattaacttatcgtataatagattacaaggagagattcctgatg |
23259167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 25801303 - 25801256
Alignment:
| Q |
162 |
aaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25801303 |
aaaacatcaacttctcatataatagattacaaggagagattcctgatg |
25801256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1415 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: scaffold1415
Description:
Target: scaffold1415; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 16 - 205
Target Start/End: Complemental strand, 207 - 18
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
207 |
gcagaatctctccttagcagataataaactgaatggatcaattcccaaatcacttgctcaaatggtaagcttgatctccttggacttgtcccaaaatatg |
108 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcct |
205 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
107 |
ttaactggtgttattccaaaatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcct |
18 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 134; Significance: 6e-70; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 16 - 209
Target Start/End: Original strand, 49454 - 49647
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
||||| |||||| |||||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||| |||| ||||||||||||||||||||| |
|
|
| T |
49454 |
gcagatgctctcattagcagataataaactgtatggatcaattcccacatcacttggtgaaatggtaagcttggtctccttggacttgtcccaaaatatg |
49553 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
49554 |
ttaactggtgttattccaaaatccttagaatcacttttgtatcttcaaaacattaacttctcatataatagattaaaaggagagattcctgatg |
49647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 15940 - 16126
Alignment:
| Q |
23 |
ctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactg |
122 |
Q |
| |
|
|||||||||||| |||| |||||||||| ||||||||| |||||||||| ||||| | ||||||| ||| ||||||||||| || ||||||||||||| |
|
|
| T |
15940 |
ctctccttagcaaataacaaactgaatgaatcaattccatcatcacttggtgaaatgttgagcttgacctccttggacttgtctcagaatatgttaactg |
16039 |
T |
|
| Q |
123 |
gtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16040 |
gtgttattccaaaatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
16126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 10325008 - 10324822
Alignment:
| Q |
23 |
ctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactg |
122 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||| | |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10325008 |
ctctccttagcagaaaatgaactgaatggatcaattcccaaattacttggtcaaatggcaggcttgatctccttggacttgtcccaaaatatgttaacta |
10324909 |
T |
|
| Q |
123 |
gtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
10324908 |
gtgttattccaaaatccttagaatcacttttgtatcttgaaaacatcaacttatcatataatagattagaaggagagattcctgatg |
10324822 |
T |
|
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Target: scaffold0830 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0830
Description:
Target: scaffold0830; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 3422 - 3611
Alignment:
| Q |
16 |
gcagaagctctccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatg |
115 |
Q |
| |
|
|||||| ||||||||||| ||||| |||||| ||||||||||||| |||||||| | ||||| ||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
3422 |
gcagaatctctccttagccgataacaaactgtatggatcaattcccacatcacttgatgaaatggtaagcttgatctccttggacttgtctcaaaatatg |
3521 |
T |
|
| Q |
116 |
ttaactggtgctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcct |
205 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||| || |||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
3522 |
ctaactggtgttattccaaaatccttagaatcacttttgtaccttcaaaacatcaacttctcatacaatagattgcaaggagagattcct |
3611 |
T |
|
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Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 5101110 - 5101251
Alignment:
| Q |
64 |
atcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactggtgctattccaaaatccttagaatcacttgtgtatctccaa |
163 |
Q |
| |
|
|||||||||| ||||| ||||||||| | ||||||||||| |||||| | | |||||||| || |||||||||||||| |||||| ||||| || |
|
|
| T |
5101110 |
atcacttggtgaaatgttaagcttgagtttcttggacttgtctcaaaatcttcttactggtgcgatcccaaaatccttagagtcactttcttatcttaaa |
5101209 |
T |
|
| Q |
164 |
aacatcaacttctcatataatagattacaaggagagattcct |
205 |
Q |
| |
|
|||| ||||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
5101210 |
tacattaacttttcatacaatagattgcaaggagagattcct |
5101251 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 205
Target Start/End: Complemental strand, 5080914 - 5080735
Alignment:
| Q |
26 |
tccttagcagataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactggtg |
125 |
Q |
| |
|
||||| |||||||| ||| |||| || |||||| |||||||||||| ||||| || |||||| | ||||||||||| |||||| | | ||||||| |
|
|
| T |
5080914 |
tccttggcagataacaaattgaaagggctaattccagaatcacttggtgaaatggtaggcttgagtttcttggacttgtctcaaaatcttcttactggtg |
5080815 |
T |
|
| Q |
126 |
ctattccaaaatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcct |
205 |
Q |
| |
|
|| |||||||||||||| |||||| ||||| || |||| ||||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
5080814 |
tgatcccaaaatccttagagtcactttcttatcttaaatacattaacttttcatacaatagattgcaaggagagattcct |
5080735 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 5118669 - 5118810
Alignment:
| Q |
64 |
atcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactggtgctattccaaaatccttagaatcacttgtgtatctccaa |
163 |
Q |
| |
|
|||||||||| ||||| ||||||||| | ||||||||||| |||||| | | ||||||| || |||||||||||||| |||||| ||||| || |
|
|
| T |
5118669 |
atcacttggtgaaatgctaagcttgagtttcttggacttgtctcaaaatcttcttactggtgtgatcccaaaatccttagagtcactttcttatcttaaa |
5118768 |
T |
|
| Q |
164 |
aacatcaacttctcatataatagattacaaggagagattcct |
205 |
Q |
| |
|
|| | ||||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
5118769 |
tacgttaacttttcatacaatagattgcaaggagagattcct |
5118810 |
T |
|
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Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 14413200 - 14413036
Alignment:
| Q |
45 |
tgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactggtgctattccaaaatccttaga |
144 |
Q |
| |
|
|||||||||| ||||| ||||||||||| ||||| ||||||| | | ||||||||||| |||||| | ||||| |||| || |||||||||||||| |
|
|
| T |
14413200 |
tgaatggatctattccaaaatcacttggtgaaatgttaagcttaagtttcttggacttgtctcaaaatcttttaaccggtgtgatcccaaaatccttaga |
14413101 |
T |
|
| Q |
145 |
atcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcctgatg |
209 |
Q |
| |
|
|||| |||| || |||| || || ||||| |||| ||| ||||||||||||||||||| |
|
|
| T |
14413100 |
gctactttctgatcttaaatacataaatttgtcatacaatatattgcaaggagagattcctgatg |
14413036 |
T |
|
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