View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18585_high_5 (Length: 252)
Name: NF18585_high_5
Description: NF18585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18585_high_5 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 7 - 252
Target Start/End: Original strand, 31530596 - 31530841
Alignment:
| Q |
7 |
tgtcgaagaaaatagtataaaattagcatgttgactgtctaatttaacttattttgtgagcccatatttccaataatgagtttattttaagtttatcgat |
106 |
Q |
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| T |
31530596 |
tgtcgaagaaaatagtataaaattagcatgttgactgtctaatttaatttattttgtgagcccgtatttccaataatgagtttatgttaagtttatcgat |
31530695 |
T |
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| Q |
107 |
cgaaattagtcaagttcaatctcttaatgaagtgatctttagatttttgaacaaactcattaataatattagctgattnnnnnnnnncattact-gtgtc |
205 |
Q |
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| T |
31530696 |
cgaaattagtcgagttcaatctcttaatgaagcgatctttagatttttgaacaaactctttaataatatttgctgattaaaaaaaaa-attattaatgtc |
31530794 |
T |
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| Q |
206 |
gtttttcctgaaaaccgaataattagacaaatataattactctctaa |
252 |
Q |
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||||||||| |||| ||||| |||||||||||||||||||||||||| |
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| T |
31530795 |
gtttttcctaaaaatcgaatgattagacaaatataattactctctaa |
31530841 |
T |
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