View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18585_high_7 (Length: 246)
Name: NF18585_high_7
Description: NF18585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18585_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 13236699 - 13236469
Alignment:
| Q |
1 |
aaatgtaaataaaaactttataactagtttttctaaaagaaatattctacaataacattgtgagcaaaaggggcatacataaaataaaacgcaggtgcat |
100 |
Q |
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| T |
13236699 |
aaatgtaaataaaaactttataactagtttttctaaaagaaatattctacaataacattgtgagcaaaaggggcatacataaaataaaacgcaggtgcat |
13236600 |
T |
|
| Q |
101 |
aaagtaagtttcgatgttaattgccatcgcctttcattgggtcattcatggaagactttaaggaatacgagtgtataaattaaaggttaggaatatgtat |
200 |
Q |
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| T |
13236599 |
aaagtaagtttcgatgttaattgccatcgcctttcattgggtcattcatggaagactttaaggcatacgagtttataaattaaaggttaggaatatgtat |
13236500 |
T |
|
| Q |
201 |
gtacccccttataaaatataagccatgtaaat |
232 |
Q |
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|||||||||||| |||||||||| |||||||| |
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| T |
13236499 |
gtacccccttat-aaatataagctatgtaaat |
13236469 |
T |
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