View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18585_low_4 (Length: 279)
Name: NF18585_low_4
Description: NF18585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18585_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 41034330 - 41034077
Alignment:
| Q |
10 |
aaaatagtttttcaataaacccaatgaaatttaaataaattatggatatttcatgcaaatgtgtacttttaaatgaatatttaacatgaagcaattgggt |
109 |
Q |
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| T |
41034330 |
aaaatagtttttcaa-aaacccaatgaaatttaaataaattatggatatttcatgcaaatgtgtacttttaaatgaatatttaacatgaagcaattgggt |
41034232 |
T |
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| Q |
110 |
tgaaatgattaatgaattctgctaaaggatgaatcattcgagagaaaccaaattcaattataggatagaacaattcttgattagagtgtatttacttcat |
209 |
Q |
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| T |
41034231 |
tgaaatgattaatgagttctgctaaaggatgaatcattcgagagaaaccaaattcaattataggatagaacaattcttgattagagtgtatttgcttcat |
41034132 |
T |
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| Q |
210 |
tgcagaaattcgaatcatcatagctcattttccctaagaacgagagggttgagaa |
264 |
Q |
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| T |
41034131 |
tgcagaaattcgaatcatcatagctcattttccctaaggacgagagggttgagaa |
41034077 |
T |
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