View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18586_high_15 (Length: 343)
Name: NF18586_high_15
Description: NF18586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18586_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 46649399 - 46649719
Alignment:
| Q |
12 |
tactcgaggaatttttacaatttaaccaaacaagcctaagtccttacctccatgcctctagaaagactgaaccagcctcaggagaagtgatgataaccca |
111 |
Q |
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| T |
46649399 |
tactcgaggaatttttacaatttaaccaaacaagcctaagtccttacctccatgcctctagaaagactgaaccagcctcaggagaagtgatgataaccca |
46649498 |
T |
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| Q |
112 |
atcaaatgcattatctgcaagaatgatgagaagaaattaatgggtgaaaagtgataatgcacttaaataagcatgacattgacagcttcattcatgctat |
211 |
Q |
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| T |
46649499 |
atcaaatgcataatctgcaagaatgatgagaagaaattaatgggtgaaaagtgataatgcacctaaataagcatgacattgacagcttcattcatgctat |
46649598 |
T |
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| Q |
212 |
catgtgtatcagaaaaatatatccaagatacaacatgcaaatgactttttaagctgaaaaagtccacatc----aactcaacccaacccaactgtgtgat |
307 |
Q |
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| T |
46649599 |
catgtgtatcagaaaaatatatccaagatacaacatgcaaatgactttttaagctgaaaaagtccacatcaaggaacccaacccaacccaactgtgtgat |
46649698 |
T |
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| Q |
308 |
ggaaaatagcttatcaatact |
328 |
Q |
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||||||||||||||||||||| |
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| T |
46649699 |
ggaaaatagcttatcaatact |
46649719 |
T |
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