View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18586_low_3 (Length: 706)

Name: NF18586_low_3
Description: NF18586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18586_low_3
NF18586_low_3
[»] chr8 (39 HSPs)
chr8 (304-643)||(44884491-44884829)
chr8 (15-279)||(44884869-44885132)
chr8 (186-280)||(43847696-43847790)
chr8 (184-269)||(9737378-9737463)
chr8 (184-268)||(25689407-25689491)
chr8 (186-269)||(25139905-25139988)
chr8 (186-262)||(31373314-31373390)
chr8 (186-269)||(9524951-9525034)
chr8 (186-269)||(42688050-42688133)
chr8 (187-269)||(15042383-15042465)
chr8 (186-272)||(17980276-17980362)
chr8 (187-269)||(24608501-24608583)
chr8 (187-269)||(43468723-43468805)
chr8 (187-236)||(29108657-29108706)
chr8 (186-234)||(41225718-41225766)
chr8 (185-232)||(23857379-23857426)
chr8 (186-269)||(34073257-34073340)
chr8 (190-269)||(44070386-44070465)
chr8 (186-236)||(7649523-7649573)
chr8 (187-269)||(8034525-8034607)
chr8 (187-269)||(10970261-10970343)
chr8 (186-232)||(17987504-17987550)
chr8 (185-255)||(28378805-28378875)
chr8 (187-232)||(28465613-28465658)
chr8 (192-269)||(30942617-30942694)
chr8 (187-232)||(39484425-39484470)
chr8 (198-251)||(43763314-43763367)
chr8 (224-259)||(1342758-1342793)
chr8 (186-269)||(4798559-4798642)
chr8 (187-262)||(25119203-25119278)
chr8 (184-231)||(25689503-25689550)
chr8 (192-255)||(37219505-37219568)
chr8 (186-229)||(42523883-42523926)
chr8 (186-232)||(8682375-8682421)
chr8 (190-236)||(24074504-24074550)
chr8 (186-232)||(40249935-40249981)
chr8 (213-269)||(7314754-7314810)
chr8 (191-259)||(26703918-26703986)
chr8 (190-254)||(44136310-44136374)
[»] chr2 (40 HSPs)
chr2 (186-269)||(8234810-8234893)
chr2 (185-262)||(39726459-39726536)
chr2 (186-269)||(36520798-36520881)
chr2 (185-236)||(38820568-38820619)
chr2 (187-269)||(1836583-1836665)
chr2 (186-255)||(2114467-2114536)
chr2 (187-252)||(15392246-15392311)
chr2 (186-254)||(30474228-30474296)
chr2 (186-269)||(580801-580884)
chr2 (186-269)||(9547145-9547228)
chr2 (188-255)||(20122507-20122574)
chr2 (203-269)||(27495549-27495615)
chr2 (186-254)||(14879122-14879190)
chr2 (190-238)||(36072619-36072667)
chr2 (187-254)||(10262734-10262801)
chr2 (185-232)||(38237367-38237414)
chr2 (190-241)||(41711682-41711733)
chr2 (186-252)||(3179318-3179384)
chr2 (187-269)||(43200835-43200917)
chr2 (192-241)||(30472017-30472066)
chr2 (192-269)||(36426874-36426951)
chr2 (185-253)||(2558292-2558360)
chr2 (187-259)||(7086248-7086320)
chr2 (191-247)||(9791935-9791991)
chr2 (185-269)||(17154642-17154726)
chr2 (186-241)||(32891275-32891330)
chr2 (191-269)||(9796897-9796974)
chr2 (188-250)||(18364412-18364474)
chr2 (190-232)||(36481067-36481109)
chr2 (191-269)||(41699101-41699179)
chr2 (199-233)||(44955349-44955383)
chr2 (189-269)||(11133072-11133153)
chr2 (187-232)||(15690089-15690134)
chr2 (195-236)||(18386863-18386904)
chr2 (192-269)||(19052629-19052706)
chr2 (188-269)||(20533753-20533834)
chr2 (191-232)||(22297507-22297548)
chr2 (187-232)||(31564090-31564135)
chr2 (197-237)||(16762838-16762878)
chr2 (187-259)||(22538534-22538606)
[»] chr4 (49 HSPs)
chr4 (187-269)||(23661376-23661458)
chr4 (185-254)||(38433304-38433373)
chr4 (192-269)||(53697998-53698075)
chr4 (186-265)||(9172393-9172472)
chr4 (191-254)||(35031382-35031445)
chr4 (188-255)||(35909195-35909262)
chr4 (186-269)||(47017964-47018047)
chr4 (182-269)||(50657870-50657957)
chr4 (186-232)||(4722519-4722565)
chr4 (197-255)||(5635194-5635252)
chr4 (185-259)||(22751002-22751076)
chr4 (186-255)||(20753157-20753226)
chr4 (187-232)||(43606155-43606200)
chr4 (188-264)||(55266458-55266534)
chr4 (186-269)||(40200774-40200857)
chr4 (186-269)||(46734987-46735070)
chr4 (190-232)||(3544487-3544529)
chr4 (187-269)||(21476099-21476181)
chr4 (187-269)||(55656126-55656208)
chr4 (186-255)||(9924850-9924919)
chr4 (186-259)||(17859772-17859845)
chr4 (187-232)||(31578014-31578059)
chr4 (186-247)||(50783474-50783535)
chr4 (185-269)||(6710229-6710313)
chr4 (187-235)||(8941636-8941684)
chr4 (213-269)||(11872894-11872950)
chr4 (186-238)||(46482866-46482918)
chr4 (186-269)||(6637740-6637822)
chr4 (190-241)||(32885686-32885737)
chr4 (187-254)||(49089310-49089377)
chr4 (185-232)||(52743221-52743268)
chr4 (190-236)||(20181209-20181255)
chr4 (187-269)||(24234092-24234174)
chr4 (186-236)||(29269366-29269415)
chr4 (191-269)||(34773701-34773779)
chr4 (187-232)||(548942-548987)
chr4 (197-254)||(3442848-3442905)
chr4 (187-232)||(5430420-5430465)
chr4 (195-232)||(6053983-6054020)
chr4 (187-232)||(9285714-9285759)
chr4 (192-269)||(10098125-10098202)
chr4 (192-269)||(16201296-16201373)
chr4 (187-232)||(56546504-56546549)
chr4 (187-255)||(13211384-13211452)
chr4 (185-269)||(31601799-31601883)
chr4 (187-255)||(43115263-43115331)
chr4 (185-269)||(45350269-45350353)
chr4 (185-269)||(45359748-45359832)
chr4 (188-232)||(52560760-52560804)
[»] chr3 (36 HSPs)
chr3 (187-269)||(49639023-49639105)
chr3 (186-252)||(43566831-43566897)
chr3 (186-259)||(19540335-19540408)
chr3 (186-279)||(24751268-24751361)
chr3 (188-269)||(13539982-13540063)
chr3 (192-269)||(32876134-32876211)
chr3 (185-241)||(13616120-13616176)
chr3 (187-247)||(50720417-50720477)
chr3 (187-247)||(50792371-50792431)
chr3 (187-250)||(13874871-13874933)
chr3 (186-269)||(32508812-32508895)
chr3 (186-269)||(33206751-33206834)
chr3 (186-269)||(35483263-35483346)
chr3 (186-269)||(42271031-42271114)
chr3 (187-269)||(16277969-16278051)
chr3 (185-247)||(34503208-34503270)
chr3 (183-236)||(45713471-45713524)
chr3 (188-269)||(49146080-49146161)
chr3 (192-232)||(19117458-19117498)
chr3 (191-255)||(41121870-41121934)
chr3 (198-269)||(28206555-28206626)
chr3 (197-231)||(20486781-20486815)
chr3 (186-236)||(34136757-34136807)
chr3 (190-236)||(48516138-48516184)
chr3 (189-269)||(14868681-14868762)
chr3 (187-232)||(17440020-17440065)
chr3 (198-255)||(20244140-20244197)
chr3 (187-236)||(20623828-20623877)
chr3 (187-232)||(23820624-23820669)
chr3 (191-232)||(38176053-38176094)
chr3 (191-232)||(40786279-40786320)
chr3 (183-232)||(42832111-42832160)
chr3 (186-231)||(54983765-54983810)
chr3 (190-234)||(335083-335127)
chr3 (199-247)||(21420229-21420277)
chr3 (190-234)||(48173284-48173328)
[»] chr5 (34 HSPs)
chr5 (188-269)||(18872517-18872598)
chr5 (187-235)||(21017658-21017706)
chr5 (197-265)||(27440320-27440388)
chr5 (186-247)||(13754000-13754061)
chr5 (184-269)||(42595733-42595818)
chr5 (185-269)||(32158432-32158516)
chr5 (186-269)||(843386-843469)
chr5 (186-232)||(10508574-10508620)
chr5 (191-269)||(24205435-24205512)
chr5 (187-269)||(27219581-27219663)
chr5 (191-261)||(34010534-34010604)
chr5 (183-232)||(20699480-20699529)
chr5 (187-255)||(42801473-42801541)
chr5 (197-259)||(3102155-3102218)
chr5 (186-253)||(19059038-19059105)
chr5 (187-254)||(33800888-33800955)
chr5 (187-269)||(2029146-2029228)
chr5 (191-269)||(29841347-29841425)
chr5 (190-232)||(31934930-31934972)
chr5 (211-253)||(33141823-33141865)
chr5 (186-232)||(40339154-40339200)
chr5 (188-250)||(41843654-41843716)
chr5 (191-232)||(18478002-18478043)
chr5 (189-269)||(20735193-20735274)
chr5 (187-232)||(22599990-22600035)
chr5 (187-232)||(29050795-29050840)
chr5 (187-232)||(29266063-29266108)
chr5 (187-232)||(36888148-36888193)
chr5 (187-247)||(4666486-4666546)
chr5 (188-232)||(7645157-7645201)
chr5 (192-232)||(29096363-29096403)
chr5 (191-231)||(30403749-30403789)
chr5 (191-254)||(32252952-32253015)
chr5 (189-269)||(40250195-40250275)
[»] chr7 (42 HSPs)
chr7 (186-269)||(38778697-38778780)
chr7 (187-279)||(44437833-44437925)
chr7 (187-269)||(22706046-22706128)
chr7 (199-269)||(30152748-30152818)
chr7 (193-255)||(36176872-36176934)
chr7 (183-232)||(4104471-4104520)
chr7 (185-269)||(7263016-7263100)
chr7 (186-250)||(49012392-49012456)
chr7 (187-254)||(22965991-22966058)
chr7 (187-234)||(35919724-35919771)
chr7 (186-269)||(42887148-42887231)
chr7 (187-269)||(21086099-21086181)
chr7 (186-236)||(31279357-31279407)
chr7 (187-269)||(34948101-34948183)
chr7 (187-253)||(46337902-46337968)
chr7 (191-269)||(47552212-47552290)
chr7 (186-231)||(8195909-8195954)
chr7 (187-236)||(29710151-29710200)
chr7 (187-236)||(32387176-32387225)
chr7 (186-254)||(23685587-23685655)
chr7 (197-269)||(46716338-46716410)
chr7 (187-230)||(13905483-13905526)
chr7 (187-246)||(14967675-14967734)
chr7 (187-246)||(15397151-15397210)
chr7 (186-269)||(36315992-36316075)
chr7 (186-232)||(30644163-30644209)
chr7 (187-269)||(31694066-31694147)
chr7 (187-269)||(38025336-38025418)
chr7 (187-269)||(43970872-43970953)
chr7 (186-259)||(46914957-46915031)
chr7 (186-247)||(2366351-2366412)
chr7 (187-232)||(4818015-4818060)
chr7 (189-269)||(14818383-14818464)
chr7 (189-269)||(15265381-15265462)
chr7 (187-232)||(22741198-22741243)
chr7 (187-232)||(34962027-34962072)
chr7 (224-269)||(40011744-40011789)
chr7 (191-231)||(2756487-2756527)
chr7 (192-232)||(4590661-4590701)
chr7 (187-231)||(21925470-21925514)
chr7 (192-232)||(22047520-22047560)
chr7 (185-269)||(25711149-25711233)
[»] chr1 (47 HSPs)
chr1 (186-269)||(15774330-15774413)
chr1 (187-269)||(3532992-3533073)
chr1 (187-236)||(49606749-49606798)
chr1 (185-269)||(4429500-4429584)
chr1 (189-237)||(29442017-29442065)
chr1 (198-250)||(38851641-38851693)
chr1 (185-253)||(43555908-43555976)
chr1 (191-269)||(17871099-17871175)
chr1 (187-254)||(21884570-21884637)
chr1 (186-253)||(23930578-23930645)
chr1 (187-262)||(35619033-35619108)
chr1 (186-269)||(42831941-42832024)
chr1 (187-262)||(49916435-49916510)
chr1 (183-269)||(538347-538433)
chr1 (199-269)||(2208656-2208726)
chr1 (186-232)||(5172657-5172703)
chr1 (186-232)||(18923940-18923986)
chr1 (183-269)||(37733746-37733832)
chr1 (186-271)||(9408630-9408715)
chr1 (187-232)||(38020003-38020048)
chr1 (187-235)||(11213501-11213549)
chr1 (198-254)||(16110053-16110109)
chr1 (186-254)||(30649087-30649155)
chr1 (186-254)||(49251428-49251496)
chr1 (189-255)||(25819181-25819248)
chr1 (197-236)||(44341289-44341328)
chr1 (186-232)||(4354160-4354206)
chr1 (197-255)||(11802052-11802110)
chr1 (199-269)||(15368812-15368882)
chr1 (192-238)||(24636724-24636770)
chr1 (186-232)||(29331219-29331265)
chr1 (186-232)||(37490884-37490930)
chr1 (190-247)||(8261715-8261772)
chr1 (187-232)||(20357455-20357500)
chr1 (187-232)||(20562455-20562500)
chr1 (190-259)||(22346418-22346486)
chr1 (186-255)||(23464018-23464087)
chr1 (187-232)||(24661977-24662022)
chr1 (186-255)||(27745151-27745220)
chr1 (189-269)||(29491466-29491547)
chr1 (187-232)||(33059547-33059592)
chr1 (189-269)||(39238712-39238793)
chr1 (187-232)||(49010755-49010800)
chr1 (184-232)||(23345110-23345158)
chr1 (187-247)||(40814806-40814866)
chr1 (190-269)||(41833553-41833633)
chr1 (184-232)||(46116229-46116277)
[»] scaffold0191 (1 HSPs)
scaffold0191 (197-269)||(16852-16923)
[»] scaffold0178 (2 HSPs)
scaffold0178 (191-255)||(4322-4386)
scaffold0178 (205-269)||(16078-16142)
[»] chr6 (31 HSPs)
chr6 (187-247)||(16801784-16801844)
chr6 (186-269)||(9491753-9491836)
chr6 (187-254)||(32057029-32057096)
chr6 (187-269)||(7563594-7563676)
chr6 (187-231)||(8233081-8233125)
chr6 (186-269)||(10377142-10377225)
chr6 (186-269)||(12089091-12089174)
chr6 (197-236)||(15126248-15126287)
chr6 (187-250)||(17419734-17419797)
chr6 (186-269)||(22389768-22389851)
chr6 (211-269)||(2970208-2970266)
chr6 (187-253)||(18244046-18244112)
chr6 (185-246)||(12291163-12291224)
chr6 (187-232)||(19642602-19642647)
chr6 (187-232)||(24623517-24623562)
chr6 (188-269)||(35190759-35190840)
chr6 (197-241)||(20716438-20716482)
chr6 (185-232)||(7303785-7303832)
chr6 (194-269)||(12101888-12101963)
chr6 (187-254)||(18631467-18631534)
chr6 (185-232)||(22501011-22501058)
chr6 (197-236)||(31741514-31741553)
chr6 (211-253)||(753346-753388)
chr6 (191-241)||(12127955-12128005)
chr6 (186-236)||(18991478-18991528)
chr6 (189-269)||(6143961-6144041)
chr6 (187-232)||(30566053-30566098)
chr6 (186-235)||(30743009-30743058)
chr6 (187-255)||(10373590-10373658)
chr6 (186-258)||(16269746-16269818)
chr6 (191-259)||(22850810-22850878)
[»] scaffold0009 (1 HSPs)
scaffold0009 (187-269)||(185530-185612)
[»] scaffold0343 (1 HSPs)
scaffold0343 (205-269)||(8573-8637)
[»] scaffold0039 (1 HSPs)
scaffold0039 (187-269)||(101826-101908)
[»] scaffold0330 (1 HSPs)
scaffold0330 (224-267)||(6803-6846)
[»] scaffold0308 (1 HSPs)
scaffold0308 (189-255)||(7072-7139)
[»] scaffold0062 (1 HSPs)
scaffold0062 (191-262)||(7043-7114)
[»] scaffold1086 (1 HSPs)
scaffold1086 (187-232)||(2483-2528)
[»] scaffold0008 (1 HSPs)
scaffold0008 (192-237)||(43746-43791)


Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 304 - 643
Target Start/End: Complemental strand, 44884829 - 44884491
Alignment:
Q  304 gatatatatacctcttacttgagacaaatatcctatgcaaaacaaaaagcatatgatagtataagaattgaatccatagatacttttgattatgcaatat 403  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||||||| ||||||||||||    
T  44884829 gatatatatacctcgtacttgagacaaatatcctatgcaaaacaaaaaacata----------agaattgaatccatagatacttttcattatgcaatat 44884740  T
Q  404 gatggatccatcacc---------ctccatatcacaaaaacagcaccctctccctttccctgattcggtgccagcactgccttcctctcctcgtcatcat 494  Q
    ||||||||||||| |         ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  44884739 gatggatccatcatcaccctccatctccatatcacaaaaacagcaccctctccctttccctgaatcggtgtcagcactgccttcctctcctcgtcatcat 44884640  T
Q  495 tatcataatgacacatctgatctcctcctcatccctcacgtgcctggctccaaactccgcctcatgtgcagctacggtggccacatcatgccacgtgaca 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44884639 tatcataatgacacatctgatctcctcctcatccctcacgtgcctggctccaaactccgcctcatgtgcagctacggcggccacatcatgccacgtgaca 44884540  T
Q  595 actccctcttctacgttggtggcgacacgcgtatcgtcgccgttgaccg 643  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  44884539 actccctctactacgtcggtggcgacactcgtatcgtcgccgttgaccg 44884491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 15 - 279
Target Start/End: Complemental strand, 44885132 - 44884869
Alignment:
Q  15 caaatgattatgtataacaatgttatgtcttttaaacatttgaatatagtttttaagagaattgattttgtcgtacaataagaatttgtagcgagcttgt 114  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44885132 caaatgattatgtataacaatgttgtttcttttaaacatttgaatatagtttttaagagaattgattttgtcgtacaataagaattggtagcgagcttgt 44885033  T
Q  115 tggtctcactcttgcgtaattttctaccaacgtttatataatatattcctagtttcttagattagaagatatgtcccgtgaacatagctcagttgttagg 214  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || | |||| ||||||| |||||    
T  44885032 tggt-tcactcttgcgtaattttctaccaacgtttatataatatattcctagtttcttagattagaagatatgtacagtaagcataactcagttattagg 44884934  T
Q  215 acaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttataaggtgaatt 279  Q
    |||||||||||||||||||||| |||| | |||||||||| || |||||| |||| |||||||||    
T  44884933 acaatacattattatatgtaggggtcgggattcaaaccccaaatatcctatttattaggtgaatt 44884869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 43847696 - 43847790
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttataaggtgaattt 280  Q
    |||| ||||| ||||||||||||| ||||||||| |||||||||||| ||| | || ||||| ||||||||||| || ||||||||| |||||||    
T  43847696 tgtctcgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttataagatgaattt 43847790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 9737463 - 9737378
Alignment:
Q  184 tatgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||| |||| | |||||||| ||| ||| ||| || ||||||    
T  9737463 tatgtcccgtgagcatagctcagttggtaggacaatacattattatatataggggccgaggttcgaactccggacaccccacttat 9737378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 25689491 - 25689407
Alignment:
Q  184 tatgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctactta 268  Q
    |||||| ||||| ||||||||||||| ||||||| | |||||||||||||||| | |||||||| ||||||| ||| ||||||||    
T  25689491 tatgtctcgtgagcatagctcagttggtaggacactgcattattatatgtaggggccgaggttcgaaccccggacaccctactta 25689407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 25139988 - 25139905
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| |||||||||  ||||||||||| ||||| |||||||||||| ||| |||| ||||| |||||||||||||| ||||||    
T  25139988 tgtccagtgaacataattcagttgttagaacaatgcattattatatgcaggggtcggggttcgaaccccgaacatcccacttat 25139905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 31373314 - 31373390
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcc 262  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||| |  ||||||| || |||| ||||||    
T  31373314 tgtcccgtgagcatagctcagttggtaggacattacattattatatgtaggggcagaggttcgaatcccggacatcc 31373390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 9524951 - 9525034
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| ||| | || ||||| ||||||  ||| |||||||||    
T  9524951 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttat 9525034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 42688050 - 42688133
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| ||||| ||||| ||||||| ||||||||| |||||||||||||||| |||| | ||| ||||||||||| || ||||||    
T  42688050 tgtctcgtgagcatagttcagttggtaggacaatgcattattatatgtaggggtcgggattcgaaccccgaacaccccacttat 42688133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 15042465 - 15042383
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||| ||| | || ||||| ||||||| ||| || ||||||    
T  15042465 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttat 15042383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 17980276 - 17980362
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttataag 272  Q
    |||||||||| ||||||||||||| ||||||||  |||||||||||| ||| | || ||||| ||||||| ||| || |||||||||    
T  17980276 tgtcccgtgagcatagctcagttggtaggacaaagcattattatatgcaggggccggggttcgaaccccggacaccccacttataag 17980362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 24608583 - 24608501
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||| ||| | || ||||| ||||||  ||| |||||||||    
T  24608583 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttat 24608501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 43468805 - 43468723
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||| ||||||||| |||| ||||||||||| |||| ||||| ||| ||| ||| || ||||||    
T  43468805 gtcccgtgagcatagctcagttggtaggacaatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttat 43468723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 29108657 - 29108706
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  29108657 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgtagg 29108706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 41225766 - 41225718
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgta 234  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  41225766 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgta 41225718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 23857426 - 23857379
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  23857426 atgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 23857379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 34073340 - 34073257
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| | ||| ||||||| ||||| ||| |||||||||||||||| ||| |||||| ||||||| ||| || ||||||    
T  34073340 tgtcccgtgagcgtagttcagttggtaggataatgcattattatatgtaggggtcaaggttcgaaccccggacaccccacttat 34073257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 44070465 - 44070386
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||| | ||||||||||  |||||||||||||||||||||||||| | || ||||| |||| || ||| |||||||||    
T  44070465 ccgtgagcgtagctcagttagtaggacaatacattattatatgtaggggccgcggttcgaacctcggacaccctacttat 44070386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 7649523 - 7649573
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    |||||||||| ||||||||| ||| ||||||||| ||||||||||||||||    
T  7649523 tgtcccgtgagcatagctcacttggtaggacaatgcattattatatgtagg 7649573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 8034525 - 8034607
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| |||| ||| |||  ||||||||| |||||||||||| ||||| || ||||| ||||||||||| || ||||||    
T  8034525 gtcccgtgagcataactccgttaataggacaatgcattattatatgcaggagccggggttcgaaccccgaacaccccacttat 8034607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 10970261 - 10970343
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| |||| ||||||||||||| ||||| ||| |||||||||||| ||| |  | ||||||||||||||||| || ||||||    
T  10970261 gtcctgtgagcatagctcagttggtaggataatgcattattatatgcaggggctggggttcaaaccccgaacaccccacttat 10970343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 17987550 - 17987504
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  17987550 tgtcccgtgaacatagctcagttggtaggataatgcattattatatg 17987504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 28378805 - 28378875
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||||||||||||||||||| ||| |||||||| | ||||||||||| ||| |  ||||||| |||||||    
T  28378805 atgtcccgtgaacatagctcaattggtaggacaagatattattatatgcaggggctgaggttcgaaccccg 28378875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 28465613 - 28465658
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  28465613 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 28465658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 30942694 - 30942617
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| |||| ||| ||||||||| |||||||||||| ||| | || ||||| ||||||||||| || ||||||    
T  30942694 gtgaacataactcaattgataggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttat 30942617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 39484470 - 39484425
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  39484470 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 39484425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 43763367 - 43763314
Alignment:
Q  198 atagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaac 251  Q
    |||||||||||| |||||||||  ||||||||||||||| || |||||||||||    
T  43763367 atagctcagttggtaggacaatttattattatatgtaggggtggaggttcaaac 43763314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 1342758 - 1342793
Alignment:
Q  224 tattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    ||||||||||||| ||||||||||||||||||||||    
T  1342758 tattatatgtaggggtcgaggttcaaaccccgaaca 1342793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 4798642 - 4798559
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||  |||||||||||| ||||| ||| |||||||||||| ||| | || ||||| ||||||| ||| || ||||||    
T  4798642 tgtcccgtgagtatagctcagttggtaggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttat 4798559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 25119203 - 25119278
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcc 262  Q
    ||||||||| ||||| ||| ||| ||||||||| |||||||||||| ||| || | ||||| ||||||| ||||||    
T  25119203 gtcccgtgagcatagttcaattggtaggacaatgcattattatatgcaggggttggggttcgaaccccggacatcc 25119278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 25689550 - 25689503
Alignment:
Q  184 tatgtcccgtgaacatagctcagttgttaggacaatacattattatat 231  Q
    |||||||||||| ||||||||||||| | ||||||| |||||||||||    
T  25689550 tatgtcccgtgagcatagctcagttggttggacaatgcattattatat 25689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 37219505 - 37219568
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||| |||| |||||||| |||||||||| ||||||||||| ||| || | |||||||||||||    
T  37219505 gtgagcataactcagttggtaggacaatatattattatatgcaggtgttggggttcaaaccccg 37219568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 42523926 - 42523883
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattat 229  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||    
T  42523926 tgtcccatgaacttagctcagttgttaggacaatgcattattat 42523883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 8682375 - 8682421
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||| ||||||||||||| ||||||||| | ||||||||||    
T  8682375 tgtcccgtgagcatagctcagttggtaggacaattctttattatatg 8682421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 24074504 - 24074550
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    |||||| || |||||||||| ||||||||| ||||||||||||||||    
T  24074504 ccgtgatcacagctcagttggtaggacaatgcattattatatgtagg 24074550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 40249981 - 40249935
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  40249981 tgtcccgtgagcataactcagttggtaggacaatgcattattatatg 40249935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 7314754 - 7314810
Alignment:
Q  213 ggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||||||||||| ||| | |||||||| ||||||| ||| || ||||||    
T  7314754 ggacaatacattattatatgcaggggccgaggttcgaaccccggacaccccacttat 7314810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 26703986 - 26703918
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    ||||| |||| |||||||| ||||||||| |||||||||||| | | |||| ||||| || ||||||||    
T  26703986 cgtgagcataactcagttggtaggacaatgcattattatatgcaagggtcggggttcgaatcccgaaca 26703918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 44136374 - 44136310
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    |||||| |||| |||||||| |||||||||| ||||||||||| ||| |  ||||||| ||||||    
T  44136374 ccgtgagcataactcagttggtaggacaatatattattatatgcaggggctgaggttcgaacccc 44136310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 5e-18; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 8234893 - 8234810
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| | || ||||| ||||||| ||| || ||||||    
T  8234893 tgtcccgtgagcatagctcagttggtaggacaatacattattatatgtaggggccggggttcgaaccccggacaccccacttat 8234810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 39726536 - 39726459
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcc 262  Q
    |||||||||||   ||||||||||| ||||||||| |||||||||||||||| |||||||||| |||| |||||||||    
T  39726536 atgtcccgtgagtctagctcagttggtaggacaatgcattattatatgtaggggtcgaggttcgaacctcgaacatcc 39726459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 36520881 - 36520798
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| | ||||||||||| ||||||||| |||||||||||||||| |||| ||||| ||||||| ||| || ||||||    
T  36520881 tgtcccgtgagcgtagctcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttat 36520798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 38820568 - 38820619
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  38820568 atgttccgtgaacatagctcagttgttaggacaatgcattattatatgtagg 38820619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 1836583 - 1836665
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| | ||||||||||| ||||||||| |||||||||||| |||| ||| ||||| ||||||| ||| |||||||||    
T  1836583 gtcccgtgagcctagctcagttggtaggacaatgcattattatatgaaggaatcggggttcgaaccccggacaccctacttat 1836665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 2114536 - 2114467
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||||||||| ||||||||||||| ||| ||||| |||||||||||||||| |||| ||||| |||||||    
T  2114536 tgtcccgtgagcatagctcagttggtagaacaatgcattattatatgtaggggtcggggttcgaaccccg 2114467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 15392311 - 15392246
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacc 252  Q
    ||||||||| |||| |||||||| ||||||||| |||||||||||||||||| |||||||| ||||    
T  15392311 gtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggagacgaggttcgaacc 15392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 30474296 - 30474228
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| ||| | |||||||| ||||||    
T  30474296 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccgaggttcgaacccc 30474228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 580884 - 580801
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| ||| | || ||||| ||||||| ||| || ||||||    
T  580884 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttat 580801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 9547228 - 9547145
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||| ||| | || ||||| || |||||||| || ||||||    
T  9547228 tgtcccgtgaacatagctcagttgataggacaatgtattattatatgcaggggccggggttcgaatcccgaacaccccacttat 9547145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 20122574 - 20122507
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||||| | || ||||| |||||||    
T  20122574 tcccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccg 20122507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 27495549 - 27495615
Alignment:
Q  203 tcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| ||||||||| |||||||||||| ||| || ||| ||| |||||||||||||||||||||    
T  27495549 tcagttggtaggacaatgcattattatatgcaggggttgagattcgaaccccgaacatcctacttat 27495615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 14879122 - 14879190
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    |||||||||| ||||| || |||| |||||||||||||||||||||||||| |  || |||||||||||    
T  14879122 tgtcccgtgagcatagttccgttggtaggacaatacattattatatgtaggggctgaagttcaaacccc 14879190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 36072667 - 36072619
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtaggag 238  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||||    
T  36072667 ccgtgagcatagctcagttgttaggacaatgcaatattatatgtaggag 36072619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 10262734 - 10262801
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||||||| |||| |||||||| ||||||||| |||||||||||| ||| |||| ||||| ||||||    
T  10262734 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacccc 10262801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 38237367 - 38237414
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  38237367 atgtcccgtgaaaatagctcagttggtaggataatacattattatatg 38237414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 41711733 - 41711682
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcg 241  Q
    |||||| |||||||| |||| ||||||||| |||||||||||||||||||||    
T  41711733 ccgtgagcatagctctgttggtaggacaatgcattattatatgtaggagtcg 41711682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 3179318 - 3179384
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacc 252  Q
    |||||||||| |||| |||||||| ||| ||||| |||||||||||| ||| |||||||||| ||||    
T  3179318 tgtcccgtgagcataactcagttggtagaacaatgcattattatatgcaggggtcgaggttcgaacc 3179384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 43200835 - 43200917
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| |||||||||||||||||| ||| |||||| ||||||||||| ||| | ||  |||| ||||||||||| || ||||||    
T  43200835 gtccagtgaacatagctcagttggtagaacaatatattattatatgcaggggccggagttcgaaccccgaacaccccacttat 43200917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 30472066 - 30472017
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggagtcg 241  Q
    |||| |||| |||||||| ||||||||||| |||||||||||||||||||    
T  30472066 gtgagcataactcagttgataggacaatactttattatatgtaggagtcg 30472017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 36426951 - 36426874
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| ||||||||| ||| ||||||||| |||||||||||||||| || | ||||| ||| ||||||| || ||||||    
T  36426951 gtgagcatagctcacttggtaggacaatgcattattatatgtaggggttggggttcgaactccgaacaccccacttat 36426874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 2558360 - 2558292
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccc 253  Q
    |||||||||||  |||||||| ||| ||||||||| |||||||||||||||| |||  ||||| |||||    
T  2558360 atgtcccgtgagaatagctcaattggtaggacaatgcattattatatgtaggggtcagggttcgaaccc 2558292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 7086248 - 7086320
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||| ||| | || | ||| |||||||||||    
T  7086248 gtcccgtgagcatagctcagttggtagggcaatgcattattatatgcaggggccgggattcgaaccccgaaca 7086320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 9791991 - 9791935
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||| |||| |||||    
T  9791991 cgtgagcatagttcagttggtaggacaatgcattattatatgtaggtgtcggggttc 9791935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 17154642 - 17154726
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||| |||| ||| |||| ||||||||| |||||||||||| ||| | || ||||| ||||||| ||| || ||||||    
T  17154642 atgtcccgtgagcataactcggttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttat 17154726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 32891275 - 32891330
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcg 241  Q
    ||||| ||| |||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  32891275 tgtcctgtggacatagctcagttggtaggacaatgcattattatatgcaggggtcg 32891330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 9796897 - 9796974
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| ||||||||||||| | ||||||| |||||||||||| ||| |||| ||||| ||||||| ||| || ||||||    
T  9796897 cgtgaccatagctcagttgat-ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttat 9796974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 18364474 - 18364412
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaa 250  Q
    |||||||| ||||||| ||||| ||| ||||| |||||||||||| ||| |||| ||||||||    
T  18364474 tcccgtgagcatagctgagttggtagaacaatgcattattatatgcaggggtcggggttcaaa 18364412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 36481067 - 36481109
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||    
T  36481067 ccgtgagcatagctcagttggtaggacaatgcattattatatg 36481109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 41699101 - 41699179
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| |||| |||||||| ||||| | | |||||||||||| ||| |||| ||||| ||||||||||| || ||||||    
T  41699101 cgtgagcataactcagttggtaggatattgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttat 41699179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 44955383 - 44955349
Alignment:
Q  199 tagctcagttgttaggacaatacattattatatgt 233  Q
    ||||||||||||||||||||| |||||||||||||    
T  44955383 tagctcagttgttaggacaatgcattattatatgt 44955349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 11133072 - 11133153
Alignment:
Q  189 cccgtgaacatagctcagttgtta-ggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| ||||||||||||| || ||||||| |||| ||||||| ||| |||| ||||| ||||||| ||| || ||||||    
T  11133072 cccgtgagcatagctcagttggtagggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttat 11133153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 15690134 - 15690089
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||||||| ||||||||| |||| |||||||    
T  15690134 gtcccgtgagcatagctcagttggtaggacaatgcattgttatatg 15690089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 18386904 - 18386863
Alignment:
Q  195 aacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  18386904 aacatagctcaattggtaggacaatgcattattatatgtagg 18386863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 19052706 - 19052629
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||| ||| ||||||||| |||||||||||| ||| |||  | ||| ||||||| |||||| ||||||    
T  19052706 gtgaacatagttcaattggtaggacaatgcattattatatgcaggggtcaggattcgaaccccggacatcccacttat 19052629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 20533753 - 20533834
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| ||| ||||||||||||| ||| |||| ||||||||||||| ||   ||||||||| ||||||  |||||| ||||||    
T  20533753 tcccatgagcatagctcagttggtagaacaaaacattattatatgcagagatcgaggttcgaaccccacacatcccacttat 20533834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 22297548 - 22297507
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||    
T  22297548 cgtgagcatagctcagttggtaggacaatgcattattatatg 22297507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 31564090 - 31564135
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  31564090 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 31564135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 16762878 - 16762838
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtagga 237  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  16762878 catagctcagttggtaggacaatgcatttttatatgtagga 16762838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 22538534 - 22538606
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    ||||||||| | || |||||||| ||||||||| |||||||||||| ||| || | ||||| || ||||||||    
T  22538534 gtcccgtgagcctaactcagttggtaggacaatgcattattatatgcaggggttggggttcgaatcccgaaca 22538606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 23661458 - 23661376
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||||| || | ||||| ||||||||||| || ||||||    
T  23661458 gtcccgtgaacatagctcagttgctaggacaatgcattgttatatgtaggggtaggggttcgaaccccgaacaccccacttat 23661376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 38433304 - 38433373
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    |||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||||  |||| ||||||    
T  38433304 atgtcctgtgaacatagttcagttgataggacaatgcattattatatgtaggagtcggagttcgaacccc 38433373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 53698075 - 53697998
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| | || ||||| ||||||| ||| || ||||||    
T  53698075 gtgaacatagctcagttgttaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttat 53697998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 9172472 - 9172393
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctac 265  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| ||| |||| ||||| |||| |||||| |||||    
T  9172472 tgtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcgaacaccctac 9172393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 35031382 - 35031445
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| ||||| |||||||| ||||||    
T  35031382 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggagccgaggttcgaacccc 35031445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 35909262 - 35909195
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||  |||| ||||| |||||||    
T  35909262 tcccgtgaacatagttcagttggtaggacaatacattattatatgcagaggtcggggttcgaaccccg 35909195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 47018047 - 47017964
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| ||| | || ||||| ||||||| ||| || ||||||    
T  47018047 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttat 47017964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 50657870 - 50657957
Alignment:
Q  182 gatatgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| ||||||||| ||||||||||||| ||||||||| |||||||||||| ||| |||  ||||| ||| || ||||||| ||||||    
T  50657870 gataagtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcatggttcgaactccaaacatcccacttat 50657957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 4722565 - 4722519
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  4722565 tgtcccgtgaacatagctcagttggtaggacaatgcattattatatg 4722519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 5635194 - 5635252
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||||||||||| ||||||||| |||||||||||| ||| |||| |||||||||||||    
T  5635194 catagctcagttgctaggacaatgcattattatatgcaggggtcggggttcaaaccccg 5635252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 22751002 - 22751076
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    ||||||||||| ||||||||||||  |||| |||| | |||||||||| ||| |||| |||||||||||||||||    
T  22751002 atgtcccgtgagcatagctcagttcgtaggtcaatgcgttattatatgcaggggtcggggttcaaaccccgaaca 22751076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 20753226 - 20753157
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||||||||| ||||||||||||| ||||| ||| |||||||||||||||| | || ||||| |||||||    
T  20753226 tgtcccgtgagcatagctcagttggtaggaaaatgcattattatatgtaggggccggggttcgaaccccg 20753157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 43606200 - 43606155
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  43606200 gtcccgtgaacatagctcagttgataggacaatgcattattatatg 43606155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 55266534 - 55266458
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatccta 264  Q
    |||||||| ||||||||||||| ||| ||||| |||||||||||| ||| ||||  |||| || |||||||||||||    
T  55266534 tcccgtgagcatagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaatcccgaacatccta 55266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 40200857 - 40200774
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||| | ||  || ||||| ||| |||||||| | ||||||    
T  40200857 tgtcccgtgaacattgctcagttggtaggacaatgcattattatatgcatgatccggggttcgaactccgaacattccacttat 40200774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 46735070 - 46734987
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||||| | |||||||||||| |||  ||| |||||||||| || ||| || ||||||    
T  46735070 tgtcccgtgagcatagctcagttggtaggacactgcattattatatgcagggatcggggttcaaacctcggacaccccacttat 46734987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 3544529 - 3544487
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  3544529 ccgtgaacatagctcagttggtaggacaatgcattattatatg 3544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 21476181 - 21476099
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||| ||||| | | |||||||||||| ||| ||||| |||| ||| ||| |||||| ||||||    
T  21476181 gtcccgtgagcatagctcagttgataggatattgcattattatatgcaggggtcgatgttcgaactccggacatcccacttat 21476099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 55656208 - 55656126
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| |||| |||||||| | |||||||||||||||||||| ||| | ||  ||||||| |||| ||| |||||||||    
T  55656208 gtcccgtgagcataactcagttggttggacaatacattattatatgcaggggccggagttcaaatcccggacaccctacttat 55656126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 9924850 - 9924919
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||||||||| ||||| ||||||| ||||||||  |||||||||||| ||| |||| ||||| |||||||    
T  9924850 tgtcccgtgagcatagttcagttggtaggacaacgcattattatatgcaggggtcggggttcgaaccccg 9924919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 17859772 - 17859845
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    ||||| |||| ||||||||||||| ||||||||| |||||||||| ||||| | ||  |||| |||||||||||    
T  17859772 tgtcctgtgagcatagctcagttggtaggacaatgcattattatacgtaggggccggagttcgaaccccgaaca 17859845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 31578014 - 31578059
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  31578014 gtcccgtgaacatagctgagttggtaggacaatgcattattatatg 31578059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 50783535 - 50783474
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    |||||||||| ||||||||||||| ||||||| | |||||||||||| ||| |||| |||||    
T  50783535 tgtcccgtgagcatagctcagttggtaggacattgcattattatatgcaggcgtcggggttc 50783474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 6710313 - 6710229
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| ||| ||||||| ||||| | ||||||| |||||||||||| | |||||||||||| || | ||| ||||| ||||||    
T  6710313 atgtcccatgagcatagcttagttggttggacaatgcattattatatgcaagagtcgaggttcgaatctcgatcatcccacttat 6710229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 8941684 - 8941636
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtag 235  Q
    ||||| ||| |||||||||||||||| |||||| |||||||||||||||    
T  8941684 gtcccatgagcatagctcagttgttaagacaatgcattattatatgtag 8941636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 11872894 - 11872950
Alignment:
Q  213 ggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| |||||||||||||||| ||||  |||| ||||||| |||||||||||||    
T  11872894 ggacaatgcattattatatgtaggggtcggagttcgaaccccggacatcctacttat 11872950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 46482918 - 46482866
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggag 238  Q
    |||||||||| ||||  ||||||| |||||||||||||||||||||| |||||    
T  46482918 tgtcccgtgagcataattcagttggtaggacaatacattattatatgcaggag 46482866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 6637822 - 6637740
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| |||||| |||||  ||| |||||||||||||||||| ||| || | ||||| ||||||||||| || ||||||    
T  6637822 tgtcccgtgagcatagc-cagttcgtagaacaatacattattatatgcaggggttggggttcgaaccccgaacaccccacttat 6637740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 32885686 - 32885737
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcg 241  Q
    |||||| ||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  32885686 ccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcg 32885737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 49089377 - 49089310
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||||||| | ||||| ||||| |||||||||||||||||||||| ||| | ||| |||| ||||||    
T  49089377 gtcccgtgagcttagcttagttggtaggacaatacattattatatgcaggggccgaagttcgaacccc 49089310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 52743221 - 52743268
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||| |||||||| |||| ||||||||| ||||||||||||    
T  52743221 atgtcccgtgagcatagctcggttggtaggacaatgcattattatatg 52743268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 20181209 - 20181255
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    |||||| ||||||||||||| ||||||||| || |||||||||||||    
T  20181209 ccgtgagcatagctcagttggtaggacaatgcagtattatatgtagg 20181255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 24234174 - 24234092
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||| ||| | || ||||  ||||||| ||| || ||||||    
T  24234174 gtcccgtgagcatagctcagttggtaggtcaatgcattattatatgcaggggccggggtttgaaccccggacaccccacttat 24234092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 29269415 - 29269366
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    |||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  29269415 tgtcccgtgagcatagctcagttggt-ggacaatgcattattatatgtagg 29269366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 34773779 - 34773701
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||| ||| |  ||||||| ||||||| ||| || ||||||    
T  34773779 cgtgagcatagttcagttgataggacaatgcattattatatgcaggggctgaggttcgaaccccggacaccccacttat 34773701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 548987 - 548942
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||||| |||||| ||||||||| ||||||||||||    
T  548987 gtcccgtgagcatagcccagttggtaggacaatgcattattatatg 548942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 3442848 - 3442905
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||||||||||| ||||||||| ||||||||||||| || | || ||||| ||||||    
T  3442848 catagctcagttggtaggacaatgcattattatatgtcggggccggggttcgaacccc 3442905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 5430465 - 5430420
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||||||| |||||||||  |||||||||||    
T  5430465 gtcccgtgagcatagctcagttggtaggacaatgtattattatatg 5430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 6053983 - 6054020
Alignment:
Q  195 aacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  6053983 aacatagctcagttggtaggacaatgcattattatatg 6054020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 9285759 - 9285714
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  9285759 gtcccgtgagcatagctcaattggtaggacaatgcattattatatg 9285714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 10098125 - 10098202
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||||||| || ||||||||| |||||||||||| ||| | || | ||| ||||||| ||| || ||||||    
T  10098125 gtgaacatagctcagctggtaggacaatgcattattatatgcaggggccgggattcgaaccccggacaccccacttat 10098202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 16201296 - 16201373
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| ||||||||||||| ||||||||| |||||||| ||||||| || | ||||  ||| ||| |||||||| ||||    
T  16201296 gtgaccatagctcagttggtaggacaatgcattattacatgtaggggttggggtttgaactccggacatcctatttat 16201373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 56546549 - 56546504
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  56546549 gtcccgtgagcatagctcaattggtaggacaatgcattattatatg 56546504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 13211452 - 13211384
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||||||||  |||| ||||||| ||||||||| |||||||||||| | | |||| ||||| |||||||    
T  13211452 gtcccgtgagtatagttcagttggtaggacaatgcattattatatgcatgggtcggggttcgaaccccg 13211384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 31601799 - 31601883
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||  |||||||||||| ||| |||||  ||||||||||| ||| | |||| ||| ||||||| ||| || ||||||    
T  31601799 atgtcccgtgagtatagctcagttggtagaacaatgtattattatatgcaggggccgagattcgaaccccggacaccccacttat 31601883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 43115263 - 43115331
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||||||| | ||| ||||||| |||||||||  ||||||||||| ||| |||||| ||| |||||||    
T  43115263 gtcccgtgagcttagttcagttggtaggacaatgtattattatatgcaggggtcgagattcgaaccccg 43115331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 45350269 - 45350353
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| | ||||||||||||| ||||||| | |||||||||||| ||  ||||  |||| ||||||| ||| || ||||||    
T  45350269 atgtcccgtcagcatagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttat 45350353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 45359748 - 45359832
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| | ||||||||||||| ||||||| | |||||||||||| ||  ||||  |||| ||||||| ||| || ||||||    
T  45359748 atgtcccgtcagcatagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttat 45359832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 52560760 - 52560804
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  52560760 tcccgtgagcatagctcaattggtaggacaatgcattattatatg 52560804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 49639023 - 49639105
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||| | || ||||| ||||||||||| || ||||||    
T  49639023 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccgaacaccccacttat 49639105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 43566897 - 43566831
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacc 252  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||| ||||| ||||    
T  43566897 tgtcccgtgaacatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacc 43566831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 19540335 - 19540408
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||| |||||  | ||||| |||||||||||    
T  19540335 tgtcccatgagcatagctcagttggtaggacaatacattattatatgcaggagctggggttcgaaccccgaaca 19540408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 279
Target Start/End: Complemental strand, 24751361 - 24751268
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttataaggtgaatt 279  Q
    |||||||||| ||||||||||||  ||||||||| |||||||||||| ||| | || ||||| ||||||| ||| || ||||||||| ||||||    
T  24751361 tgtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttataagatgaatt 24751268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 13540063 - 13539982
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||  |||||||||||| ||||||||| |||||||||||||||| || | ||||| ||||||| ||| || ||||||    
T  13540063 tcccgtgagtatagctcagttggtaggacaatgcattattatatgtaggggttggggttcgaaccccggacaccccacttat 13539982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 32876211 - 32876134
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| |||| |||||||| ||||||||| |||||||||||| ||| ||||| ||||||||| || |||||||| ||||    
T  32876211 gtgagcatatctcagttggtaggacaatgcattattatatgcaggggtcgaagttcaaacctcggacatcctatttat 32876134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 13616176 - 13616120
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcg 241  Q
    |||||||||||||||| ||| |||| ||||||||| |||||||||||||||| ||||    
T  13616176 atgtcccgtgaacataactcggttggtaggacaatgcattattatatgtaggggtcg 13616120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 50720417 - 50720477
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    ||||||||| ||||| ||||||| ||||||||| |||||||||||||| | ||||||||||    
T  50720417 gtcccgtgagcatagttcagttggtaggacaatgcattattatatgtatgggtcgaggttc 50720477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 50792431 - 50792371
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    ||||||||| ||||| ||||||| ||||||||| |||||||||||||| | ||||||||||    
T  50792431 gtcccgtgagcatagttcagttggtaggacaatgcattattatatgtatgggtcgaggttc 50792371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 13874933 - 13874871
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaa 250  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||| ||| |||| ||||||||    
T  13874933 gtcccgtgaacatagctcagttggt-ggacaatgcattattatatgcaggggtcggggttcaaa 13874871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 32508895 - 32508812
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| | || |||||||| ||||| ||| |||||||||||| ||| |||| ||||| ||||||||||| || ||||||    
T  32508895 tgtcccgtgagcctaactcagttgataggataatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttat 32508812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 33206751 - 33206834
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| ||| |  | ||||| ||||||| ||| || ||||||    
T  33206751 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttat 33206834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 35483263 - 35483346
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||  ||||||||| |||||||||||| ||| |||| ||||| || |||| ||| || ||||||    
T  35483263 tgtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttat 35483346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 42271114 - 42271031
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||||||| |||| ||||||| ||| | || ||||| ||| ||| ||| |||||||||    
T  42271114 tgtcccgtgagcatagctcagttggtaggacaatgcattgttatatgcaggggccggggttcgaactccggacaccctacttat 42271031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 16278051 - 16277969
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||| |||||| || |||||||||||| ||| |||| | ||| ||| ||| |||||| ||||||    
T  16278051 gtcccgtgagcatagctcagttggtaggaccatgcattattatatgcaggggtcgggattcgaactccggacatcccacttat 16277969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 34503208 - 34503270
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    ||||| ||||| ||||||||||||| ||||||||| |||||||||||| ||||| || |||||    
T  34503208 atgtctcgtgagcatagctcagttggtaggacaatgcattattatatgcaggagccggggttc 34503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 45713471 - 45713524
Alignment:
Q  183 atatgtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||||||||| |||| || ||||| ||||||||| ||||||||||||||||    
T  45713471 atatgtcccgtgagcataacttagttggtaggacaatgcattattatatgtagg 45713524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 49146080 - 49146161
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||| | || |||||||| ||||||||| |||||||||||| ||| |||| ||||| ||||||| ||| || ||||||    
T  49146080 tcccgtgagcttaactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttat 49146161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 19117458 - 19117498
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  19117458 gtgagcatagctcagttggtaggacaatacattattatatg 19117498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 41121870 - 41121934
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||| |||| |||||||| ||||||||| |||||||||||| ||  |||| |||||||||||||    
T  41121870 cgtgagcataactcagttggtaggacaatgcattattatatgcagaggtcggggttcaaaccccg 41121934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 28206626 - 28206555
Alignment:
Q  198 atagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||| |||||||| ||||||||||||| | | |||||||||  ||||| | |||||| ||||||    
T  28206626 atagctcagttggtaggacaagacattattatatgcacgggtcgaggtttgaaccctggacatcccacttat 28206555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 20486815 - 20486781
Alignment:
Q  197 catagctcagttgttaggacaatacattattatat 231  Q
    ||||||||||||| |||||||||||||||||||||    
T  20486815 catagctcagttggtaggacaatacattattatat 20486781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 34136757 - 34136807
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||| |||| ||||||||||||| ||| ||||| ||||||||||||||||    
T  34136757 tgtcctgtgagcatagctcagttggtagaacaatgcattattatatgtagg 34136807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 48516184 - 48516138
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    |||||| |||| |||| ||| ||||||||||||||||||||||||||    
T  48516184 ccgtgagcataactcaattgataggacaatacattattatatgtagg 48516138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 14868681 - 14868762
Alignment:
Q  189 cccgtgaacatagctcagttgttagg-acaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| |||||||||||||  ||| ||||| |||||||||||| ||| | || ||||| ||||||||||| || ||||||    
T  14868681 cccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttat 14868762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 17440065 - 17440020
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||||||| |||| ||||||||| ||||||||||||    
T  17440065 gtcccgtgagcatagctcggttggtaggacaatgcattattatatg 17440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 20244140 - 20244197
Alignment:
Q  198 atagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||||||||||| ||||||||| |||||||||||| ||| | || ||||| |||||||    
T  20244140 atagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccg 20244197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 20623877 - 20623828
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||||| |||| |||||||  ||||||||| ||||||||||||||||    
T  20623877 gtcccgtgagcataactcagtttgtaggacaatgcattattatatgtagg 20623828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 23820624 - 23820669
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||| || |||||||| ||||||||| ||||||||||||    
T  23820624 gtcccgtgaacgtaactcagttggtaggacaatgcattattatatg 23820669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 38176053 - 38176094
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||||||||||| ||||||||| || |||||||||    
T  38176053 cgtgaacatagctcagttggtaggacaatgcaatattatatg 38176094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 40786279 - 40786320
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||    
T  40786279 cgtgagcatagctcagttggtaggacaatgcattattatatg 40786320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 42832160 - 42832111
Alignment:
Q  183 atatgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||||| |||||| |||||| ||||| ||| ||||||||||||    
T  42832160 atatgtcccgtgatcatagcccagttggtaggataatgcattattatatg 42832111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 54983810 - 54983765
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatat 231  Q
    |||||||||| ||||||||||||| ||||| ||| |||||||||||    
T  54983810 tgtcccgtgagcatagctcagttggtaggataatgcattattatat 54983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 335127 - 335083
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgta 234  Q
    |||||| ||||||| ||||| ||||||||| ||||||||||||||    
T  335127 ccgtgagcatagcttagttggtaggacaatgcattattatatgta 335083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 21420277 - 21420229
Alignment:
Q  199 tagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    ||||||||||| ||||||||| |||||||||||| ||  ||||||||||    
T  21420277 tagctcagttggtaggacaatgcattattatatgcagcggtcgaggttc 21420229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 48173284 - 48173328
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgta 234  Q
    |||||| ||||||||||||| || |||||| ||||||||||||||    
T  48173284 ccgtgagcatagctcagttggtaagacaatgcattattatatgta 48173328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 18872517 - 18872598
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||| ||| |||| ||||| ||||||||||| || ||||||    
T  18872517 tcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttat 18872598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 21017706 - 21017658
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtag 235  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21017706 gtcccgtgaacatagctcagttggtaggacaatgcattattatatgtag 21017658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 27440388 - 27440320
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctac 265  Q
    ||||||||||||| ||||||||| |||||||||||| ||  |||||||||| ||||||||||| |||||    
T  27440388 catagctcagttggtaggacaatgcattattatatgcagtggtcgaggttcgaaccccgaacaccctac 27440320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 13754000 - 13754061
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||| ||| ||||| ||||    
T  13754000 tgtcccgtaaacataactcagttggtaggacaatacattattatatgcaggggtcgatgttc 13754061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 42595733 - 42595818
Alignment:
Q  184 tatgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||| |||   || ||||  ||||||||||| || ||||||    
T  42595733 tatgtcccgtgagcatagctcaattggtaggacaatacattattatatgcagggaccggggtttgaaccccgaacaccccacttat 42595818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 32158516 - 32158432
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||| | ||||||| ||| ||||||||| |||||||||||| ||| | || ||||| ||||||||||| || ||||||    
T  32158516 atgtcccgtgagcttagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttat 32158432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 843469 - 843386
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| |||| |||||||| || |||||| |||||||||||||||| | || ||||| ||||||| ||| || ||||||    
T  843469 tgtcccgtgagcatatctcagttggtatgacaatgcattattatatgtaggggacggggttcgaaccccggacaccccacttat 843386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 10508574 - 10508620
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||    
T  10508574 tgtcccgtgaacatagctcagttggtaggacaatgtattattatatg 10508620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 24205435 - 24205512
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||| ||||||| ||||||||| |||| ||||||||||| ||| |||||| ||||||| ||| || ||||||    
T  24205435 cgtgaacatagttcagttggtaggacaatgcattgttatatgtaggggtc-aggttcgaaccccggacaccccacttat 24205512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 27219663 - 27219581
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||| ||||| ||||||||| |||||||||||| | | | || ||||||||||||| ||| || ||||||    
T  27219663 gtcccgtgagcatagcttagttggtaggacaatgcattattatatgcatgggccggggttcaaaccccgtacaccccacttat 27219581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 34010534 - 34010604
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatc 261  Q
    ||||||||||| ||||||| ||||||||| ||||||||||| |||| ||||  |||| ||||||| |||||    
T  34010534 cgtgaacatagttcagttggtaggacaatgcattattatatataggggtcggagttcgaaccccggacatc 34010604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 20699529 - 20699480
Alignment:
Q  183 atatgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||| ||||| ||||||||||||| ||||||||| ||||||||||||    
T  20699529 atatgtctcgtgaccatagctcagttggtaggacaatgcattattatatg 20699480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 42801541 - 42801473
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||||||| ||||||||||||| || || ||| |||||||||||| ||| |||| ||||| |||||||    
T  42801541 gtcccgtgatcatagctcagttggtatgataatgcattattatatgcaggggtcggggttcgaaccccg 42801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 3102218 - 3102155
Alignment:
Q  197 catagctcagttgttagg-acaatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    |||||||||||||  ||| ||||| |||| |||||||||||||||| ||||| |||||||||||    
T  3102218 catagctcagttggcagggacaatgcattgttatatgtaggagtcggggttcgaaccccgaaca 3102155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 19059105 - 19059038
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccc 253  Q
    |||||||||| ||||||||||||| ||||||||| |||||| ||||| ||| | || ||||| |||||    
T  19059105 tgtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcaggggccggggttcgaaccc 19059038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 33800888 - 33800955
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||||||| |||| |||||||| ||||||||| |||||||||||| ||| | || ||||| ||||||    
T  33800888 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggccggggttcgaacccc 33800955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 2029228 - 2029146
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| |||| || ||||| |||||||||  ||||||||||| ||| |||| | ||| ||||||||||| || ||||||    
T  2029228 gtcccgtgagcataacttagttggtaggacaatgtattattatatgcaggggtcgggattcgaaccccgaacaccccacttat 2029146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 29841347 - 29841425
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| | | | |||| ||| ||||||| ||| || ||||||    
T  29841347 cgtgagcatagctcagttggtaggacaatgcattattatatgcaagggccgagattcgaaccccggacaccccacttat 29841425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 31934972 - 31934930
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||    
T  31934972 ccgtgaacataactcagttggtaggacaatgcattattatatg 31934930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 33141865 - 33141823
Alignment:
Q  211 taggacaatacattattatatgtaggagtcgaggttcaaaccc 253  Q
    ||||||||| |||||||||||| |||||||||||||| |||||    
T  33141865 taggacaatgcattattatatgcaggagtcgaggttcgaaccc 33141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 40339200 - 40339154
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||| ||||||||||||  ||||||||| ||||||||||||    
T  40339200 tgtcccgtgagcatagctcagttagtaggacaatgcattattatatg 40339154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 41843654 - 41843716
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaa 250  Q
    ||||||||| |||||||| ||| |||||||||| ||||||||||| ||| |||  ||||||||    
T  41843654 tcccgtgaatatagctcaattggtaggacaatatattattatatgcaggggtcagggttcaaa 41843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 18478002 - 18478043
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||    
T  18478002 cgtgagcatagctcagttggtaggacaatgcattattatatg 18478043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 20735274 - 20735193
Alignment:
Q  189 cccgtgaacatagctcagttgttagg-acaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||||||||||||  ||| ||||| |||||||||||||||| | || ||||| || |||| ||| || ||||||    
T  20735274 cccgtgaacatagctcagttggcagggacaatgcattattatatgtaggggccggggttcgaatcccggacaccccacttat 20735193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 22600035 - 22599990
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  22600035 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 22599990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 29050795 - 29050840
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||| || ||||||||||||| ||||||||| ||||||||||||    
T  29050795 gtcccgcgagcatagctcagttggtaggacaatgcattattatatg 29050840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 29266063 - 29266108
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  29266063 gtcccgtgagcatagctcaattgataggacaatgcattattatatg 29266108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 36888193 - 36888148
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  36888193 gtcccgtgagcatatctcagttggtaggacaatgcattattatatg 36888148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 4666546 - 4666486
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    ||||||||| ||||||||| ||| ||| ||||| |||||||||||| | | ||||||||||    
T  4666546 gtcccgtgagcatagctcaattggtagaacaatgcattattatatgcaagggtcgaggttc 4666486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 7645201 - 7645157
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||| ||||||| ||||| ||||||||| ||||||||||||    
T  7645201 tcccgtgagcatagcttagttggtaggacaatgcattattatatg 7645157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 29096403 - 29096363
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  29096403 gtgagcatagctcagttggtaggacaatgcattattatatg 29096363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 30403749 - 30403789
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatat 231  Q
    ||||| |||| |||||||| |||||||||||||||||||||    
T  30403749 cgtgagcataactcagttggtaggacaatacattattatat 30403789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 32253015 - 32252952
Alignment:
Q  191 cgtgaacatagctcagttgtta-ggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||||||||||||||||| || ||||| | |||||||||||||||| |||| ||||| ||||||    
T  32253015 cgtgaacatagctcagttgataaggaca-tgcattattatatgtaggggtcggggttcgaacccc 32252952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 40250275 - 40250195
Alignment:
Q  189 cccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| |||||||||||||  || |  || |||| ||||||| |||||||| ||||| |||| |||||| |||||||||    
T  40250275 cccgtgagcatagctcagttggcagtaacatgcattgttatatgcaggagtcggggttcgaacctcgaacaccctacttat 40250195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 38778780 - 38778697
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| ||| | |||||||| ||||||| |||||| ||||||    
T  38778780 tgtcccgtgagcatatctcagttggtaggacaatgcattattatatgcaggggccgaggttctaaccccggacatcccacttat 38778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 44437925 - 44437833
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttataaggtgaatt 279  Q
    ||||||||| ||||||||||||  ||||||||| |||||||||||| ||| | || ||||| ||||||| ||| || ||||||||| ||||||    
T  44437925 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttataagatgaatt 44437833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 22706128 - 22706046
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||| ||| |  ||||||||||| ||| ||| || ||||||    
T  22706128 gtcccgtgaacatagctcagttggtaggacaatgtattattatatgcaggggctgaggttcaaactccggacaccccacttat 22706046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 30152748 - 30152818
Alignment:
Q  199 tagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||| ||||||||| ||||||||||| |||| |||| ||||| ||||||||||| || ||||||    
T  30152748 tagctcagttggtaggacaatgcattattatatataggggtcggggttcgaaccccgaacaccccacttat 30152818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 36176872 - 36176934
Alignment:
Q  193 tgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |   ||||||||||||||    
T  36176872 tgaacatagctcagttggtaggacaatgcattattatatgtaggggctaaggttcaaaccccg 36176934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 4104471 - 4104520
Alignment:
Q  183 atatgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  4104471 atatgtcccgtgagcatagctcaattgttaggacaatgcattattatatg 4104520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 7263100 - 7263016
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||  |||||||||||| ||||||||| |||||||||||||||  || |  |||| ||||||||||| |||| ||||    
T  7263100 atgtcccgtgagtatagctcagttggtaggacaatgcattattatatgtagaggttggagttcgaaccccgaacaccctatttat 7263016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 49012392 - 49012456
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaa 250  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| ||| |||  ||||||||    
T  49012392 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgaaggggtcagggttcaaa 49012456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 22966058 - 22965991
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||||||| ||||||||| ||| ||||||||| |||||||||||| ||| | |||||||| ||||||    
T  22966058 gtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaacccc 22965991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 35919771 - 35919724
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgta 234  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  35919771 gtcccgtgagcatagctcagttgttaagacaatgcattattatatgta 35919724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 42887148 - 42887231
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| || |||||| |||||||||||| ||| |  ||||||| ||||||| ||| || ||||||    
T  42887148 tgtcccgtgagcatagctcagttggtacgacaattcattattatatgcaggggctgaggttcgaaccccggacaccccacttat 42887231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 21086099 - 21086181
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||| |||  |||| |||| ||| ||| ||| || ||||||    
T  21086099 gtcccatgaacatagctcagttggtaggacaatgcattattatatgcagggatcgaagttcgaactccggacacccaacttat 21086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 31279407 - 31279357
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    |||||| |||||||| |||||||| ||||||||| ||||||||||||||||    
T  31279407 tgtcccttgaacataactcagttggtaggacaatgcattattatatgtagg 31279357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 34948101 - 34948183
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||| ||||||||| |||||| ||||| ||  | |||||||| ||||||| ||| || ||||||    
T  34948101 gtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcagtggccgaggttcgaaccccggacaccccacttat 34948183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 46337968 - 46337902
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccc 253  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||| |||  ||| ||||| |||||    
T  46337968 gtcccgtgaacatagttcagttggtaggacaatgcattattatatgcagggatcggggttcgaaccc 46337902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 47552212 - 47552290
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| | | | || ||||| ||||||| ||| |||||||||    
T  47552212 cgtgagcatagctcagttggtaggacaatgcattattatatgcaagggccggggttcgaaccccggacaccctacttat 47552290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 8195909 - 8195954
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatat 231  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  8195909 tgtcccgtgagcatagctcagttggtaggacaatgcattattatat 8195954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 29710200 - 29710151
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    |||||||||  |||||||||||| ||||||||| ||||||||||||||||    
T  29710200 gtcccgtgagtatagctcagttggtaggacaatgcattattatatgtagg 29710151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 32387225 - 32387176
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||||| |||| |||||||| ||||| ||||||||||||||||||||    
T  32387225 gtcccgtgagcataactcagttggtaggataatacattattatatgtagg 32387176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 23685655 - 23685587
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    |||||| ||| ||||||||||||| ||||||||| |||||||||||| ||| | || ||||| ||||||    
T  23685655 tgtcccatgagcatagctcagttgataggacaatgcattattatatgcaggggccggggttcgaacccc 23685587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 46716338 - 46716410
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||||| ||||||||| |||||||||||| ||  |||| ||||| ||||| ||||| || ||||||    
T  46716338 catagctcagttggtaggacaatgcattattatatgcagaggtcggggttcgaaccctgaacaccccacttat 46716410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 13905526 - 13905483
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattata 230  Q
    ||||||||||||||||||||||| |||||||||  |||||||||    
T  13905526 gtcccgtgaacatagctcagttggtaggacaatgtattattata 13905483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 14967734 - 14967675
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggtt 246  Q
    |||| |||| |||| |||||||| ||||||||| |||||||||||||||| |||| ||||    
T  14967734 gtcctgtgagcataactcagttggtaggacaatgcattattatatgtaggggtcggggtt 14967675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 15397210 - 15397151
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggtt 246  Q
    |||| |||| |||| |||||||| ||||||||| |||||||||||||||| |||| ||||    
T  15397210 gtcctgtgagcataactcagttggtaggacaatgcattattatatgtaggggtcggggtt 15397151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 36316075 - 36315992
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||| ||| |||||||||||| ||| | || ||||| |||| || ||| || ||||||    
T  36316075 tgtcccgtgagcatagctcagttggtaggataatgcattattatatgcaggggccggggttcgaacctcggacaccccacttat 36315992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 30644163 - 30644209
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||  |||||||||||| ||||||||| ||||||||||||    
T  30644163 tgtcccgtgagtatagctcagttggtaggacaatgcattattatatg 30644209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 31694066 - 31694147
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||| ||| | |||| ||| ||| ||| ||| || ||||||    
T  31694066 gtcccgtgaacatagctcagttggt-ggacaatgcattattatatgcaggggacgagattcgaactccggacaccccacttat 31694147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 38025336 - 38025418
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| |||| ||||||||| ||| ||||||||| |||||||||||| |||||| | ||||| |||| || |||| | ||||||    
T  38025336 gtcctgtgagcatagctcatttgataggacaatgcattattatatgcaggagttggggttcgaacctcggacattccacttat 38025418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 43970953 - 43970872
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| |||| |||||||| ||| ||||| |||||||||||| || || || ||||| |||| |||||| |||||||||    
T  43970953 gtcccgtgagcataactcagttggtagaacaatgcattattatatgcagaagacggggttcgaacctcgaaca-cctacttat 43970872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 46914957 - 46915031
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttagga-caatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    |||||||||| |||| ||||||||  | || |||||||||||||||| ||||||||||  ||| |||||||||||    
T  46914957 tgtcccgtgagcataactcagttggcacgaacaatacattattatatataggagtcgaatttcgaaccccgaaca 46915031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 2366351 - 2366412
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    ||||||||||  ||| |||||||| ||||||||| |||||||||||| ||| |||| |||||    
T  2366351 tgtcccgtgagtataactcagttgataggacaatgcattattatatgcaggggtcggggttc 2366412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 4818015 - 4818060
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||| ||||||||| ||||||||| ||||||||||||    
T  4818015 gtcccgtgagcatcgctcagttggtaggacaatgcattattatatg 4818060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 14818464 - 14818383
Alignment:
Q  189 cccgtgaacatagctcagttgttagg-acaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| |||||||||||||  ||| ||| | |||||||||||| ||| |||| |||||||||||| |||| || ||||||    
T  14818464 cccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttat 14818383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 15265462 - 15265381
Alignment:
Q  189 cccgtgaacatagctcagttgttagg-acaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| |||||||||||||  ||| ||| | |||||||||||| ||| |||| |||||||||||| |||| || ||||||    
T  15265462 cccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttat 15265381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 22741198 - 22741243
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||||||| |||| ||||||||| ||||||||||||    
T  22741198 gtcccgtgagcatagctcggttggtaggacaatgcattattatatg 22741243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 34962072 - 34962027
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||| |||| ||||||||||||| ||||||||| ||||||||||||    
T  34962072 gtcctgtgagcatagctcagttggtaggacaatgcattattatatg 34962027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 40011744 - 40011789
Alignment:
Q  224 tattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||| |||||||||| |||||||||||||| ||||||    
T  40011744 tattatatgcaggggtcgaggttcgaaccccgaacatcccacttat 40011789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 2756527 - 2756487
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatat 231  Q
    ||||||||||||||||||| |||||||||  ||||||||||    
T  2756527 cgtgaacatagctcagttggtaggacaatgaattattatat 2756487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 4590701 - 4590661
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  4590701 gtgagcatagctcagttggtaggacaatgcattattatatg 4590661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 21925470 - 21925514
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatat 231  Q
    ||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  21925470 gtcccgtgagcatagctcaattggtaggacaatgcattattatat 21925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 22047520 - 22047560
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  22047520 gtgagcatagctcagttggtaggacaatgcattattatatg 22047560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 25711233 - 25711149
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||||  ||| |||||||| ||||| ||| |||||||||||||||| | || ||||| |||| || ||| || ||||||    
T  25711233 atgtcccgtgagtataactcagttgataggataatgcattattatatgtaggggccggggttcgaacctcggacaccccacttat 25711149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 15774413 - 15774330
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||||||| |||| ||||| ||||||| ||| || ||||||    
T  15774413 tgtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttat 15774330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 3533073 - 3532992
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||  ||||||||| |||||||||||||||| |||| ||||| ||||||| ||| || ||||||    
T  3533073 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgtaggggtcg-ggttccaaccccggacaccccacttat 3532992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 49606798 - 49606749
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  49606798 gtcccgtaagcatagctcagttgttaggacaatgcattattatatgtagg 49606749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 4429584 - 4429500
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| |||||| ||||||||||||| ||||||||| |||||||||||| ||| || | ||||| ||||| |||||| | ||||||    
T  4429584 atgttccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggttggggttcgaaccctgaacattccacttat 4429500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 29442065 - 29442017
Alignment:
Q  189 cccgtgaacatagctcagttgttaggacaatacattattatatgtagga 237  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  29442065 cccgtgagcatagctcagttggtaggacaatgcattattatatgtagga 29442017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 38851641 - 38851693
Alignment:
Q  198 atagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaa 250  Q
    |||||||||||| ||||||||| |||||||||||||||| |||| ||||||||    
T  38851641 atagctcagttggtaggacaatgcattattatatgtaggtgtcggggttcaaa 38851693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 43555976 - 43555908
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccc 253  Q
    ||||| ||||| ||||||||||||| ||||||||| |||||||||||| |||  ||| |||||||||||    
T  43555976 atgtctcgtgagcatagctcagttggtaggacaatgcattattatatgcagggatcggggttcaaaccc 43555908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 17871175 - 17871099
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| |||||||||||||| ||||||||| |||||||||||| ||  | || ||||| ||||||||||| |||||||||    
T  17871175 cgtggacatagctcagttgataggacaatgcattattatatgcag--ggcggggttcgaaccccgaacaccctacttat 17871099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 21884570 - 21884637
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||||||| ||||||||| ||| ||||||||| |||||||||||| ||| | |||||||| ||||||    
T  21884570 gtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaacccc 21884637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 23930645 - 23930578
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccc 253  Q
    |||||||||| ||||| ||||||| ||||||||| |||||||||||| ||| |||| ||||| |||||    
T  23930645 tgtcccgtgagcatagttcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccc 23930578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 35619108 - 35619033
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcc 262  Q
    ||||| ||||||||| || |||| || |||| | |||||||||||||||| |||| ||||| ||||||||||||||    
T  35619108 gtcccatgaacatagttcggttgataagacattgcattattatatgtaggggtcggggttcgaaccccgaacatcc 35619033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 42831941 - 42832024
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||||| | |||||||||||| ||| |  | ||||||||||||| ||| || ||||||    
T  42831941 tgtcccgtgagcatagctcagttggtaggacattgcattattatatgcaggggctggggttcaaaccccggacaccccacttat 42832024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 49916435 - 49916510
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcc 262  Q
    ||||||||| ||||| ||| ||| ||||||||| |||||||||||||||| |||| ||||| || |||| ||||||    
T  49916435 gtcccgtgagcatagatcaattggtaggacaatgcattattatatgtaggggtcggggttcgaatcccggacatcc 49916510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 538433 - 538347
Alignment:
Q  183 atatgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||||| ||||| ||||||| ||| ||||| |||||||||||| ||| | ||  |||| ||||||||||| || ||||||    
T  538433 atatgtcccgtgagcatagttcagttggtagaacaatgcattattatatgcaggggccggagttcgaaccccgaacaccccacttat 538347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 2208726 - 2208656
Alignment:
Q  199 tagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| ||| ||||||||| |||||||||||| ||| | |||||||||||||||  |||||| ||||||    
T  2208726 tagctcaattggtaggacaatgcattattatatgcaggggacgaggttcaaaccccagacatcccacttat 2208656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 5172703 - 5172657
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  5172703 tgtcccgtgagcatagctcagttgataggacaatgcattattatatg 5172657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 18923986 - 18923940
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  18923986 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 18923940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 269
Target Start/End: Original strand, 37733746 - 37733832
Alignment:
Q  183 atatgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| ||| |||||||||||||||||| ||||||||| |||||||||||| ||  | || ||||| ||||||| ||| || ||||||    
T  37733746 atatatccagtgaacatagctcagttggtaggacaatgcattattatatgcagtggacggggttcgaaccccggacaccccacttat 37733832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 9408715 - 9408630
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttataa 271  Q
    |||||||||| ||||||||||||| ||||||||| |||||||| ||| ||| ||||  |||| || |||| ||| || ||||||||    
T  9408715 tgtcccgtgagcatagctcagttggtaggacaatgcattattaaatgcaggggtcggagttcgaatcccggacaacccacttataa 9408630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 38020048 - 38020003
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  38020048 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 38020003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 11213549 - 11213501
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtag 235  Q
    |||| |||||||||||||||||| ||  |||||||||||||||||||||    
T  11213549 gtcctgtgaacatagctcagttggtaaaacaatacattattatatgtag 11213501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 16110109 - 16110053
Alignment:
Q  198 atagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    |||||||||||| ||||||||| |||||||||||| ||| || ||||||| ||||||    
T  16110109 atagctcagttgataggacaatgcattattatatgcaggggttgaggttcgaacccc 16110053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 30649087 - 30649155
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    |||||||||| || |||||||||| ||||||||  |||||||||||| |||||| | ||||| ||||||    
T  30649087 tgtcccgtgagcaaagctcagttgataggacaacgcattattatatgcaggagttggggttcgaacccc 30649155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 49251496 - 49251428
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||| |||| |||| |||||||| ||||||||| |||||||||||| ||| |||| ||||| ||||||    
T  49251496 tgtcctgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacccc 49251428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 25819181 - 25819248
Alignment:
Q  189 cccgtgaacatagctcagttgttagg-acaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||||| |||||||||||||  ||| ||||| |||||||||||||||||| || ||||| |||||||    
T  25819181 cccgtgagcatagctcagttggcagggacaatgcattattatatgtaggagccggggttcgaaccccg 25819248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 44341289 - 44341328
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  44341289 catagctcagttggtaggacaatacattattataagtagg 44341328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 4354206 - 4354160
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||||    
T  4354206 tgtcctgtgagcatagctcagttggtaggacaatgcattattatatg 4354160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 11802110 - 11802052
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||| |||||||| ||||||||| |||||||||||||||| || | ||||| |||||||    
T  11802110 cataactcagttggtaggacaatgcattattatatgtaggggttggggttcgaaccccg 11802052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 15368812 - 15368882
Alignment:
Q  199 tagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||| ||||||||| |||||||||||| ||| | || ||||| ||||||| ||| || ||||||    
T  15368812 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttat 15368882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 24636724 - 24636770
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtaggag 238  Q
    |||| ||||| ||||||| || |||||||||||||||||||||||||    
T  24636724 gtgatcatagttcagttggtatgacaatacattattatatgtaggag 24636770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 29331265 - 29331219
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||| ||||||| ||||| ||||||||| ||||||||||||    
T  29331265 tgtcccgtgagcatagcttagttggtaggacaatgcattattatatg 29331219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 37490884 - 37490930
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  37490884 tgtcccgtgagcataactcagttggtaggacaatgcattattatatg 37490930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 8261772 - 8261715
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    |||||| ||||||||||||| ||||| ||| |||||||||||| ||| |||| |||||    
T  8261772 ccgtgagcatagctcagttggtaggataatgcattattatatgcaggggtcggggttc 8261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 20357455 - 20357500
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  20357455 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 20357500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 20562500 - 20562455
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  20562500 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 20562455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 22346418 - 22346486
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    |||||| ||||||| ||||| |||||||||||||||||||| | ||| |||| ||||| ||||| |||||    
T  22346418 ccgtgagcatagctaagttggtaggacaatacattattataagcaggggtcg-ggttcgaaccctgaaca 22346486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 23464087 - 23464018
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||||| ||| ||||| ||||||| ||||||||| |||||||||||| ||| | || ||||| |||||||    
T  23464087 tgtcccatgagcatagttcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccg 23464018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 24661977 - 24662022
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  24661977 gtcccgtgagcatagctcaattggtaggacaatgcattattatatg 24662022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 27745151 - 27745220
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    |||||||||| ||||||||| ||| ||||| ||| |||||||||||| |||  ||| ||||| |||||||    
T  27745151 tgtcccgtgagcatagctcatttggtaggaaaatgcattattatatgcagggatcggggttcgaaccccg 27745220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 29491466 - 29491547
Alignment:
Q  189 cccgtgaacatagctcagttgttagg-acaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| |||||||||||||  ||| ||||| |||||||||||| ||| |||| ||||| ||||||| ||| || ||||||    
T  29491466 cccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttat 29491547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 33059592 - 33059547
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||| |||||||||||||||||| ||||| ||| ||||||||||||    
T  33059592 gtcctgtgaacatagctcagttggtaggataatgcattattatatg 33059547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 39238712 - 39238793
Alignment:
Q  189 cccgtgaacatagctcagttgttagg-acaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| |||||||||||||  ||| ||||| |||||||||||| ||| | |||||||| ||||||| ||| || ||||||    
T  39238712 cccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccgaggttcgaaccccggacaccccacttat 39238793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 49010800 - 49010755
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||||||| |||||||||  |||||||||||    
T  49010800 gtcccgtgagcatagctcagttggtaggacaatgtattattatatg 49010755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 23345158 - 23345110
Alignment:
Q  184 tatgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||| ||| ||||||||||||||| ||||||||| |||| |||||||    
T  23345158 tatgtctcgtcaacatagctcagttggtaggacaatgcattgttatatg 23345110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 40814866 - 40814806
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    ||||||||| ||||||||||||  || |||||| |||||||||||| ||| |||| |||||    
T  40814866 gtcccgtgagcatagctcagttagtaagacaatgcattattatatgcaggggtcggggttc 40814806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 41833633 - 41833553
Alignment:
Q  190 ccgtgaacatagctcagttgttaggacaatacattattatatgtag-gagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||| ||||| ||| ||| || |||||| ||||||||||||||| | |||| ||||| ||||||||||| || ||||||    
T  41833633 ccgtgagcatagttcaattggtatgacaatgcattattatatgtagagggtcggggttcgaaccccgaacaccccacttat 41833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 46116277 - 46116229
Alignment:
Q  184 tatgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    |||||||||||| ||||||| ||||| ||||||||| |||||| |||||    
T  46116277 tatgtcccgtgagcatagcttagttggtaggacaatgcattatcatatg 46116229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 16852 - 16923
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||||| ||||||||| |||||||||||| ||| |||| ||||| ||||||||||| |||||||||    
T  16852 catagctcagttggtaggacaatgcattattatatgcaggggtcg-ggttcgaaccccgaacaccctacttat 16923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 4322 - 4386
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||| ||||||||||||| |||||||||||||||||||||| ||| |||| ||||| |||||||    
T  4322 cgtgagcatagctcagttgataggacaatacattattatatgcaggggtcggggttcgaaccccg 4386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 16078 - 16142
Alignment:
Q  205 agttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| ||||||||| |||||||||||| |||  |||  |||| ||||||| |||||||||||||    
T  16078 agttgataggacaatgcattattatatgcagggatcggagttcgaaccccggacatcctacttat 16142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 16801784 - 16801844
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttc 247  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||| |||||    
T  16801784 gtcccgtgagcatagctcagttggtaggacaaaacattattatatgcaggagtcggggttc 16801844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 9491836 - 9491753
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||||||| | || ||||| ||||||| ||| || ||||||    
T  9491836 tgtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacaccccacttat 9491753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 32057029 - 32057096
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||| ||  |||||||||| ||||||    
T  32057029 gtcccgtgagcatagctcagttgataggacaatgcattattatatgcagtggtcgaggttcgaacccc 32057096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 7563676 - 7563594
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| ||||||||||||| ||||||||| |||||||| ||| ||| |||  ||||||||||||| ||| || ||||||    
T  7563676 gtcccgtgagcatagctcagttggtaggacaatgcattattacatgcaggggtcagggttcaaaccccggacaccccacttat 7563594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 8233081 - 8233125
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatat 231  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  8233081 gtcccgtgagcatagctcagttggtaggacaatacattattatat 8233125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 10377225 - 10377142
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||||  |||||||||||| ||||||||| |||||||||||| ||  | || ||||| ||||||||||| || ||||||    
T  10377225 tgtcccgtgagtatagctcagttggtaggacaatgcattattatatgcagaggccggggttcgaaccccgaacaccccacttat 10377142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 12089091 - 12089174
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| ||| | ||  |||| ||||||| ||| || ||||||    
T  12089091 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttat 12089174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 15126248 - 15126287
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  15126248 catagctcagttggtaggacaatacattattatatgtagg 15126287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 17419797 - 17419734
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaa 250  Q
    ||||||||| ||||||||||||  |||||||||| ||||||||||| ||| || ||||||||||    
T  17419797 gtcccgtgagcatagctcagttagtaggacaatatattattatatgcaggggttgaggttcaaa 17419734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 22389851 - 22389768
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| ||| |||  ||||| || |||| ||| || ||||||    
T  22389851 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttat 22389768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 2970208 - 2970266
Alignment:
Q  211 taggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| |||||||||||||||||||| | |||||||||||||||| ||| || ||||||    
T  2970208 taggagaatacattattatatgtaggggccgaggttcaaaccccggacaccccacttat 2970266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 18244112 - 18244046
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccc 253  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||| ||  |||| ||||| |||||    
T  18244112 gtcccatgaacatagctcagttggtaggacaatgcattattatatgcagaggtcggggttcgaaccc 18244046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 12291163 - 12291224
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggtt 246  Q
    ||||||||||| |||| |||||||||||| ||||| |||||||||||| ||| || ||||||    
T  12291163 atgtcccgtgagcataactcagttgttagaacaatgcattattatatggaggggttgaggtt 12291224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 19642647 - 19642602
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  19642647 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 19642602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 24623517 - 24623562
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||||||    
T  24623517 gtcccatgaacatagctcagttggtaggacaatgcattattatatg 24623562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 35190759 - 35190840
Alignment:
Q  188 tcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| ||| ||||||||||||| ||| ||||| |||||||||||| ||| ||||  |||| ||||||||||| || ||||||    
T  35190759 tcccatgagcatagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaaccccgaacaccccacttat 35190840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 20716482 - 20716438
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtaggagtcg 241  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||    
T  20716482 catagctcagttggtaggacaatgcattattatatgtaggggtcg 20716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 7303785 - 7303832
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||||| |||| |||||||| |||||||||| |||||||||||    
T  7303785 atgtcccgtgagcataactcagttggtaggacaatatattattatatg 7303832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 12101888 - 12101963
Alignment:
Q  194 gaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||  |||||| |||||||||||||||||||||| ||| | ||  |||| ||||||| ||| |||||||||    
T  12101888 gaacataggacagttggtaggacaatacattattatatgcaggggccggcgttcgaaccccggacaccctacttat 12101963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 18631467 - 18631534
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaacccc 254  Q
    |||| |||| ||||||||||||| |||||||||||||| ||||||| ||| |||| | ||| ||||||    
T  18631467 gtcctgtgagcatagctcagttggtaggacaatacattgttatatgcaggggtcgggattcgaacccc 18631534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 22501011 - 22501058
Alignment:
Q  185 atgtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||| ||| ||||||||||||| ||||||||| ||||||||||||    
T  22501011 atgtcccatgagcatagctcagttggtaggacaatgcattattatatg 22501058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 31741553 - 31741514
Alignment:
Q  197 catagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  31741553 catagctcagttggtaggacaatgcattattatatgtagg 31741514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 753388 - 753346
Alignment:
Q  211 taggacaatacattattatatgtaggagtcgaggttcaaaccc 253  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  753388 taggacaatacattattatatgtaggggtcggggttcgaaccc 753346  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 12128005 - 12127955
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcg 241  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  12128005 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcg 12127955  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 18991478 - 18991528
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtagg 236  Q
    ||||||| || ||||||||||||| || |||||| ||||||||||||||||    
T  18991478 tgtcccgcgagcatagctcagttggtaagacaatgcattattatatgtagg 18991528  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 6143961 - 6144041
Alignment:
Q  189 cccgtgaacatagctcagttgttagg-acaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||| |||||||||||||  ||| ||||| |||||||||||||||| |||| ||||| ||||||| ||| || ||||||    
T  6143961 cccgtgagcatagctcagttggcagggacaatgcattattatatgtaggggtcg-ggttcgaaccccggacaccccacttat 6144041  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 30566053 - 30566098
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  30566053 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 30566098  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 30743058 - 30743009
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtag 235  Q
    |||||| ||| || |||||||||| |||||||||||||||||| ||||||    
T  30743058 tgtcccatgagcaaagctcagttggtaggacaatacattattacatgtag 30743009  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 10373590 - 10373658
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||||||| |||| || ||||| ||| ||||| |||||||||||| ||| |||| ||||| |||||||    
T  10373590 gtcccgtgagcataacttagttggtagaacaatgcattattatatgcaggggtcggggttcgaaccccg 10373658  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 16269818 - 16269746
Alignment:
Q  186 tgtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaac 258  Q
    |||| ||||| |||||||| |||| ||||||| | |||||||||||| ||| || |||| || ||||||||||    
T  16269818 tgtctcgtgagcatagctcggttggtaggacagtgcattattatatgcaggggttgaggatcgaaccccgaac 16269746  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 22850810 - 22850878
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaaca 259  Q
    ||||| ||||||||||||  ||||| |||||||||||||||| ||| || | ||||| || ||||||||    
T  22850810 cgtgagcatagctcagttagtaggaaaatacattattatatgcaggggttggggttcgaagcccgaaca 22850878  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 185612 - 185530
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    |||| |||| ||||||||||||| |||||||| ||||||||||||| ||| | |||||||  |||||| ||||||| ||||||    
T  185612 gtcctgtgagcatagctcagttggtaggacaaaacattattatatgcaggggccgaggtttgaaccccaaacatcccacttat 185530  T

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Target: scaffold0343 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 8573 - 8637
Alignment:
Q  205 agttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||| ||||||||| |||||||||||||||| || | ||||| ||||||||||| |||||||||    
T  8573 agttgataggacaatgcattattatatgtaggggttggggttcgaaccccgaacaccctacttat 8637  T

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Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 101826 - 101908
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcctacttat 269  Q
    ||||||||| |||||||||| || ||||| ||| |||||||||||| ||| | || ||||| |||||| ||||||| ||||||    
T  101826 gtcccgtgagcatagctcagctggtaggataatgcattattatatgcaggggccggggttcgaaccccaaacatcccacttat 101908  T

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Target: scaffold0330 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 6803 - 6846
Alignment:
Q  224 tattatatgtaggagtcgaggttcaaaccccgaacatcctactt 267  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||    
T  6803 tattatatgtaggagtcgaggttcgaaccccaaacatcccactt 6846  T

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Target: scaffold0308 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 7072 - 7139
Alignment:
Q  189 cccgtgaacatagctcagttgtta-ggacaatacattattatatgtaggagtcgaggttcaaaccccg 255  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||| ||| | || ||||| |||||||    
T  7072 cccgtgagcatagctcagttgttagggacaatgcattattatatgcaggggccggggttcgaaccccg 7139  T

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Target: scaffold0062 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 7114 - 7043
Alignment:
Q  191 cgtgaacatagctcagttgttaggacaatacattattatatgtaggagtcgaggttcaaaccccgaacatcc 262  Q
    |||||||||||||||| || ||||||||| |||||||||||| ||| |  | ||||| ||||||| ||||||    
T  7114 cgtgaacatagctcagctggtaggacaatgcattattatatgcaggggcgggggttcgaaccccgtacatcc 7043  T

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Target: scaffold1086 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 2483 - 2528
Alignment:
Q  187 gtcccgtgaacatagctcagttgttaggacaatacattattatatg 232  Q
    ||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  2483 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 2528  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 43791 - 43746
Alignment:
Q  192 gtgaacatagctcagttgttaggacaatacattattatatgtagga 237  Q
    |||| ||||||||||||| ||||||||| |||||||||||| ||||    
T  43791 gtgagcatagctcagttggtaggacaatgcattattatatgcagga 43746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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