View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18587_high_14 (Length: 307)

Name: NF18587_high_14
Description: NF18587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18587_high_14
NF18587_high_14
[»] chr8 (30 HSPs)
chr8 (1-299)||(34723512-34723799)
chr8 (14-176)||(15884556-15884718)
chr8 (14-177)||(43027252-43027416)
chr8 (14-143)||(8141049-8141179)
chr8 (8-177)||(14666070-14666240)
chr8 (14-177)||(2467117-2467281)
chr8 (14-177)||(6100419-6100583)
chr8 (14-177)||(8997543-8997707)
chr8 (14-133)||(38922457-38922577)
chr8 (18-171)||(18373961-18374115)
chr8 (9-177)||(45521111-45521279)
chr8 (19-177)||(43032853-43033012)
chr8 (14-144)||(44893310-44893441)
chr8 (14-144)||(583761-583890)
chr8 (14-143)||(10927553-10927683)
chr8 (14-143)||(24837189-24837319)
chr8 (18-177)||(17981392-17981552)
chr8 (14-176)||(7673657-7673816)
chr8 (14-99)||(17845680-17845764)
chr8 (14-118)||(34613836-34613941)
chr8 (93-177)||(2964103-2964187)
chr8 (14-177)||(16893884-16894046)
chr8 (18-144)||(44031467-44031599)
chr8 (14-144)||(13085471-13085602)
chr8 (18-144)||(33401831-33401958)
chr8 (14-139)||(1013014-1013140)
chr8 (93-143)||(13357989-13358039)
chr8 (112-177)||(22212514-22212579)
chr8 (129-177)||(16291202-16291250)
chr8 (93-177)||(26570951-26571035)
[»] chr4 (49 HSPs)
chr4 (14-142)||(24166398-24166527)
chr4 (14-177)||(38165975-38166139)
chr4 (14-143)||(1446774-1446904)
chr4 (14-179)||(2559255-2559421)
chr4 (14-143)||(29895735-29895865)
chr4 (14-139)||(53599008-53599134)
chr4 (14-171)||(1940782-1940937)
chr4 (14-177)||(47078406-47078570)
chr4 (29-144)||(15839967-15840082)
chr4 (14-179)||(27248376-27248540)
chr4 (14-144)||(48317307-48317438)
chr4 (14-143)||(43458561-43458691)
chr4 (17-141)||(29588687-29588812)
chr4 (18-177)||(5472847-5473007)
chr4 (46-177)||(42722576-42722708)
chr4 (36-143)||(49260698-49260806)
chr4 (14-144)||(3574478-3574609)
chr4 (47-177)||(7246645-7246776)
chr4 (14-176)||(13073486-13073649)
chr4 (46-177)||(21192622-21192752)
chr4 (14-144)||(41162914-41163045)
chr4 (27-177)||(47682381-47682531)
chr4 (15-144)||(49952178-49952308)
chr4 (35-144)||(55005338-55005448)
chr4 (93-177)||(17080071-17080155)
chr4 (14-177)||(55920982-55921146)
chr4 (14-176)||(33647669-33647832)
chr4 (25-144)||(36262799-36262917)
chr4 (29-143)||(295566-295680)
chr4 (30-143)||(20354601-20354715)
chr4 (76-144)||(20532441-20532510)
chr4 (29-176)||(40780861-40781009)
chr4 (49-171)||(3159474-3159597)
chr4 (14-144)||(12703577-12703708)
chr4 (100-179)||(14567274-14567353)
chr4 (30-143)||(20128273-20128387)
chr4 (14-139)||(38075381-38075507)
chr4 (14-63)||(19651559-19651608)
chr4 (19-139)||(20421727-20421847)
chr4 (93-165)||(8424582-8424654)
chr4 (14-177)||(8888970-8889134)
chr4 (93-177)||(14124044-14124128)
chr4 (93-177)||(30317261-30317345)
chr4 (47-141)||(48015108-48015203)
chr4 (112-179)||(54946296-54946363)
chr4 (90-144)||(50485968-50486022)
chr4 (14-51)||(4736545-4736582)
chr4 (78-177)||(4738630-4738730)
chr4 (14-70)||(38841472-38841528)
[»] chr6 (22 HSPs)
chr6 (14-177)||(14107357-14107521)
chr6 (14-177)||(21898595-21898759)
chr6 (14-143)||(2271336-2271464)
chr6 (14-143)||(29333172-29333301)
chr6 (14-177)||(5253222-5253386)
chr6 (14-179)||(8938658-8938824)
chr6 (36-177)||(12606399-12606541)
chr6 (17-177)||(3601034-3601195)
chr6 (93-177)||(9633624-9633708)
chr6 (79-171)||(13391299-13391391)
chr6 (93-177)||(30788852-30788936)
chr6 (17-143)||(13036037-13036164)
chr6 (14-143)||(19230592-19230720)
chr6 (14-166)||(29444775-29444928)
chr6 (14-177)||(8611973-8612137)
chr6 (13-177)||(19089444-19089609)
chr6 (14-62)||(5759575-5759623)
chr6 (14-177)||(6606096-6606260)
chr6 (14-177)||(8932608-8932772)
chr6 (14-177)||(8944074-8944238)
chr6 (90-177)||(5029841-5029928)
chr6 (46-177)||(12635793-12635925)
[»] chr1 (43 HSPs)
chr1 (14-143)||(5855466-5855596)
chr1 (14-177)||(10422732-10422896)
chr1 (30-143)||(14254302-14254416)
chr1 (14-167)||(40288487-40288641)
chr1 (29-177)||(9659179-9659327)
chr1 (14-177)||(17642004-17642168)
chr1 (14-177)||(11397889-11398052)
chr1 (14-143)||(49078058-49078188)
chr1 (14-177)||(26660082-26660245)
chr1 (18-177)||(32150922-32151082)
chr1 (18-177)||(43959821-43959981)
chr1 (14-143)||(2980965-2981095)
chr1 (14-143)||(17092511-17092641)
chr1 (78-179)||(50371832-50371934)
chr1 (21-177)||(16956417-16956574)
chr1 (9-177)||(18915806-18915975)
chr1 (14-143)||(46929772-46929901)
chr1 (14-142)||(48798105-48798234)
chr1 (14-177)||(8763935-8764099)
chr1 (78-170)||(21849212-21849304)
chr1 (14-177)||(33004015-33004179)
chr1 (15-177)||(41663856-41664019)
chr1 (30-143)||(30927761-30927875)
chr1 (14-143)||(33418149-33418279)
chr1 (17-143)||(47312933-47313059)
chr1 (17-179)||(2567223-2567386)
chr1 (14-168)||(15465909-15466064)
chr1 (78-177)||(44969673-44969772)
chr1 (95-177)||(37339846-37339928)
chr1 (92-177)||(10172971-10173056)
chr1 (31-139)||(10336477-10336586)
chr1 (14-177)||(26325756-26325920)
chr1 (102-177)||(4581682-4581757)
chr1 (18-143)||(32819-32945)
chr1 (78-143)||(13262091-13262157)
chr1 (18-179)||(14357703-14357865)
chr1 (78-143)||(16263553-16263619)
chr1 (14-138)||(34877934-34878059)
chr1 (33-177)||(45361882-45362027)
chr1 (34-141)||(17358507-17358615)
chr1 (93-141)||(28416970-28417018)
chr1 (12-171)||(31576553-31576713)
chr1 (14-66)||(40226354-40226406)
[»] chr7 (44 HSPs)
chr7 (9-140)||(4195238-4195370)
chr7 (16-177)||(34659174-34659336)
chr7 (14-177)||(48804629-48804793)
chr7 (14-171)||(5039423-5039581)
chr7 (14-177)||(43346778-43346942)
chr7 (14-177)||(43861971-43862135)
chr7 (17-171)||(1797409-1797564)
chr7 (14-171)||(16802069-16802227)
chr7 (14-143)||(17748415-17748545)
chr7 (17-177)||(5069814-5069975)
chr7 (14-177)||(22993366-22993530)
chr7 (14-144)||(4228786-4228914)
chr7 (14-171)||(13095804-13095962)
chr7 (93-179)||(38578864-38578950)
chr7 (14-143)||(47341822-47341952)
chr7 (14-179)||(22573759-22573924)
chr7 (14-177)||(10047875-10048039)
chr7 (30-139)||(42210299-42210409)
chr7 (14-141)||(43925458-43925586)
chr7 (17-68)||(11607080-11607131)
chr7 (14-176)||(26423288-26423450)
chr7 (78-180)||(27028289-27028392)
chr7 (14-144)||(19914735-19914865)
chr7 (33-110)||(45853586-45853664)
chr7 (94-143)||(3353451-3353500)
chr7 (14-170)||(21530694-21530851)
chr7 (93-177)||(4705983-4706067)
chr7 (29-144)||(14535252-14535368)
chr7 (14-177)||(14650263-14650427)
chr7 (46-177)||(21190779-21190911)
chr7 (14-117)||(22268088-22268192)
chr7 (77-156)||(23658188-23658268)
chr7 (110-170)||(28396166-28396226)
chr7 (34-177)||(36619253-36619397)
chr7 (46-177)||(37514899-37515031)
chr7 (97-177)||(41945503-41945583)
chr7 (14-144)||(45960035-45960165)
chr7 (78-143)||(30827302-30827368)
chr7 (123-177)||(34127644-34127698)
chr7 (13-141)||(42032041-42032170)
chr7 (78-177)||(1605951-1606051)
chr7 (93-177)||(8734685-8734769)
chr7 (17-177)||(24969325-24969484)
chr7 (14-62)||(34127735-34127783)
[»] chr3 (50 HSPs)
chr3 (14-177)||(13893869-13894033)
chr3 (14-177)||(7328787-7328950)
chr3 (14-177)||(15320129-15320293)
chr3 (14-143)||(33251605-33251735)
chr3 (14-177)||(29127862-29128026)
chr3 (14-177)||(54261169-54261333)
chr3 (14-143)||(45877397-45877527)
chr3 (14-171)||(55069685-55069843)
chr3 (93-177)||(26361967-26362051)
chr3 (18-177)||(28572211-28572371)
chr3 (17-143)||(6462358-6462485)
chr3 (14-144)||(10855327-10855458)
chr3 (36-171)||(15795500-15795635)
chr3 (14-177)||(47749105-47749268)
chr3 (14-144)||(51682987-51683118)
chr3 (14-143)||(3755513-3755643)
chr3 (14-136)||(10040500-10040622)
chr3 (14-144)||(39849015-39849145)
chr3 (14-177)||(7310703-7310867)
chr3 (93-176)||(3507534-3507617)
chr3 (14-144)||(42412807-42412938)
chr3 (14-143)||(26207835-26207965)
chr3 (14-179)||(35315899-35316065)
chr3 (14-142)||(29135856-29135985)
chr3 (93-177)||(8164576-8164660)
chr3 (14-145)||(28242221-28242353)
chr3 (14-177)||(41630512-41630676)
chr3 (19-130)||(49082772-49082884)
chr3 (14-180)||(29762152-29762319)
chr3 (122-177)||(47164158-47164213)
chr3 (14-143)||(25294903-25295033)
chr3 (14-115)||(50682420-50682522)
chr3 (78-166)||(30767258-30767347)
chr3 (15-139)||(41219537-41219661)
chr3 (78-169)||(26043819-26043911)
chr3 (110-170)||(43330739-43330799)
chr3 (93-144)||(7648763-7648814)
chr3 (122-177)||(36043674-36043729)
chr3 (18-167)||(22405553-22405703)
chr3 (90-140)||(34460547-34460597)
chr3 (93-171)||(35923629-35923707)
chr3 (14-143)||(49198294-49198424)
chr3 (46-139)||(52364838-52364932)
chr3 (92-177)||(15084945-15085030)
chr3 (33-177)||(47219106-47219251)
chr3 (94-171)||(50405609-50405686)
chr3 (78-141)||(4638161-4638225)
chr3 (78-177)||(7650234-7650334)
chr3 (14-62)||(48341963-48342011)
chr3 (14-62)||(52011084-52011132)
[»] chr2 (52 HSPs)
chr2 (14-177)||(7747217-7747381)
chr2 (14-143)||(22593078-22593207)
chr2 (14-177)||(10026615-10026779)
chr2 (14-177)||(18902529-18902693)
chr2 (14-177)||(38005345-38005509)
chr2 (17-171)||(21286390-21286545)
chr2 (14-144)||(29653571-29653701)
chr2 (18-171)||(7787003-7787157)
chr2 (14-142)||(13026445-13026574)
chr2 (17-165)||(45263678-45263827)
chr2 (14-177)||(331444-331608)
chr2 (30-177)||(25540403-25540551)
chr2 (14-168)||(42770659-42770814)
chr2 (14-177)||(44945537-44945700)
chr2 (14-179)||(2550811-2550977)
chr2 (14-143)||(29422158-29422288)
chr2 (12-179)||(6358148-6358316)
chr2 (14-177)||(8410074-8410238)
chr2 (46-177)||(10823035-10823167)
chr2 (31-177)||(41220595-41220742)
chr2 (57-143)||(35946725-35946811)
chr2 (14-171)||(39201513-39201671)
chr2 (12-177)||(44139425-44139591)
chr2 (17-177)||(37560119-37560280)
chr2 (78-177)||(12455317-12455417)
chr2 (14-177)||(12864167-12864331)
chr2 (13-180)||(38962705-38962873)
chr2 (14-144)||(21180346-21180477)
chr2 (94-179)||(9360745-9360830)
chr2 (78-171)||(24179576-24179669)
chr2 (14-177)||(2528340-2528504)
chr2 (14-177)||(14169608-14169772)
chr2 (14-144)||(15079426-15079557)
chr2 (33-179)||(16034899-16035046)
chr2 (29-143)||(25549686-25549801)
chr2 (14-176)||(20612534-20612699)
chr2 (78-143)||(34130335-34130400)
chr2 (93-177)||(27725963-27726047)
chr2 (14-177)||(41031905-41032068)
chr2 (14-176)||(10046477-10046639)
chr2 (18-89)||(20963198-20963268)
chr2 (14-104)||(29697467-29697558)
chr2 (9-127)||(40968964-40969083)
chr2 (12-177)||(3811690-3811856)
chr2 (29-143)||(16813198-16813312)
chr2 (29-143)||(16852477-16852591)
chr2 (79-142)||(28525489-28525554)
chr2 (14-139)||(34356149-34356275)
chr2 (29-142)||(39806919-39807033)
chr2 (90-171)||(10669612-10669693)
chr2 (14-63)||(23500795-23500844)
chr2 (81-168)||(26805306-26805394)
[»] chr5 (47 HSPs)
chr5 (14-143)||(9168286-9168414)
chr5 (14-141)||(38897754-38897881)
chr5 (14-177)||(1538375-1538539)
chr5 (14-177)||(5731919-5732083)
chr5 (13-143)||(19572667-19572798)
chr5 (29-179)||(25417180-25417331)
chr5 (14-143)||(37263185-37263314)
chr5 (14-143)||(41163493-41163622)
chr5 (14-177)||(9812816-9812980)
chr5 (14-177)||(42086271-42086435)
chr5 (47-177)||(12081885-12082016)
chr5 (14-171)||(3653919-3654075)
chr5 (14-177)||(5079275-5079438)
chr5 (14-177)||(12704958-12705122)
chr5 (14-153)||(26077085-26077225)
chr5 (14-144)||(7866525-7866656)
chr5 (55-177)||(40117400-40117523)
chr5 (94-171)||(6764462-6764539)
chr5 (13-177)||(8513462-8513627)
chr5 (14-117)||(16755005-16755109)
chr5 (24-68)||(28862779-28862823)
chr5 (30-89)||(18327730-18327789)
chr5 (14-139)||(20682654-20682781)
chr5 (84-171)||(24463891-24463978)
chr5 (34-179)||(11845798-11845944)
chr5 (78-179)||(14588614-14588716)
chr5 (14-139)||(18136317-18136443)
chr5 (14-143)||(20525782-20525912)
chr5 (14-135)||(28857072-28857194)
chr5 (14-130)||(35403558-35403675)
chr5 (93-177)||(9805028-9805112)
chr5 (9-144)||(35561850-35561986)
chr5 (93-177)||(41801001-41801085)
chr5 (14-177)||(2485141-2485304)
chr5 (76-176)||(21487623-21487721)
chr5 (93-156)||(30995145-30995208)
chr5 (14-68)||(1826801-1826855)
chr5 (14-143)||(30349523-30349653)
chr5 (93-171)||(39099784-39099862)
chr5 (93-143)||(42291538-42291588)
chr5 (14-167)||(18294493-18294646)
chr5 (14-63)||(23383592-23383641)
chr5 (90-139)||(24875366-24875415)
chr5 (83-144)||(25452939-25453000)
chr5 (43-143)||(35638066-35638167)
chr5 (14-62)||(6767166-6767214)
chr5 (93-177)||(13664284-13664368)
[»] scaffold0006 (1 HSPs)
scaffold0006 (14-171)||(68463-68618)
[»] scaffold0029 (1 HSPs)
scaffold0029 (14-170)||(40990-41147)
[»] scaffold0004 (1 HSPs)
scaffold0004 (20-144)||(95013-95136)
[»] scaffold0011 (2 HSPs)
scaffold0011 (17-176)||(186467-186626)
scaffold0011 (122-177)||(224372-224427)
[»] scaffold0209 (1 HSPs)
scaffold0209 (14-144)||(12521-12650)
[»] scaffold0086 (1 HSPs)
scaffold0086 (14-143)||(26129-26259)
[»] scaffold0170 (1 HSPs)
scaffold0170 (79-143)||(9856-9921)
[»] scaffold0316 (1 HSPs)
scaffold0316 (78-177)||(1613-1713)
[»] scaffold0291 (1 HSPs)
scaffold0291 (93-177)||(6881-6965)
[»] scaffold0010 (2 HSPs)
scaffold0010 (93-177)||(155710-155794)
scaffold0010 (14-117)||(25843-25947)
[»] scaffold0005 (1 HSPs)
scaffold0005 (100-179)||(250022-250101)
[»] scaffold0384 (1 HSPs)
scaffold0384 (14-143)||(5919-6048)
[»] scaffold0002 (1 HSPs)
scaffold0002 (29-177)||(319383-319532)
[»] scaffold0009 (1 HSPs)
scaffold0009 (90-177)||(42831-42918)
[»] scaffold0016 (1 HSPs)
scaffold0016 (14-63)||(8824-8873)
[»] scaffold0376 (1 HSPs)
scaffold0376 (93-177)||(12696-12780)


Alignment Details
Target: chr8 (Bit Score: 159; Significance: 1e-84; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 34723799 - 34723512
Alignment:
Q  1 tgcacataatatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacg 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||||||||||| || ||||||||| |||||  ||||| |    
T  34723799 tgcacataatatgaaccaagttgtttgagctccggtggcaatgagctccttccaaagacatattcgggaaatactaagttcgattcccagggaaacaatg 34723700  T
Q  101 tttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaagnnnnnnnntgcacataatat 200  Q
    ||||||  |||||||||| |||||||| |||| |||||| |||        |||||||||||||||||||||||||| |         ||||||||||||    
T  34723699 tttggc--ttgcgcatgcctttacgcaagagctggattaatcg--------tggtgtgtcgaaaaccggtgtgaaagca-aaaaaaaatgcacataatat 34723611  T
Q  201 gttgtgtgctgtggggagaagggagacagagagaagaagaaacctgcttcattttgtctttcctgcgtccacctgtccactgtctctctggcctatgct 299  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34723610 gttgtgtgctgtggggagaatggagacagagagaagaagaaacctgcttcattttgtctttcctgcgtccacctgtccactgtctctctggcctctgct 34723512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 15884718 - 15884556
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||||||| |||||||||| || || |||||||||| ||||||   ||| ||| | | |||||||| ||||| |||||||  ||||| | ||||    
T  15884718 aaccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccaggggaacaacacttggcaagtgcg 15884619  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    ||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| ||||    
T  15884618 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 43027252 - 43027416
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||||||||||||| ||| || |||  ||||||| ||| ||| ||| |||||||| |||||| |||||||| ||| ||| |||    
T  43027252 aaccaagttgtttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgattcccaggaggaacaacgattgtccaatgc 43027351  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| |||||||||||||||   ||||||| || |||| |||||| || |||||    
T  43027352 gcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaag 43027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 8141049 - 8141179
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || || ||||||| |||||||||||| ||| | | |||||||||||||| | ||||||| ||||||| |||    
T  8141049 aaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgc 8141148  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||| | ||||||||    
T  8141149 gcatgcctctacgcatgagctgaattagtcg 8141179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 177
Target Start/End: Complemental strand, 14666240 - 14666070
Alignment:
Q  8 aatatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggc 106  Q
    ||||| |||||||||| ||| ||||||||||||| || ||| |||||| ||||||| |||| ||| | | |||||||| ||||| | ||||||  |||||    
T  14666240 aatattaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggc 14666141  T
Q  107 cattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    || ||||||||| | ||||||| |||| ||||||||||  |   |||||| |||||||||||||| |||||    
T  14666140 cagtgcgcatgcctctacgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcgaaag 14666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 2467281 - 2467117
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||||||| || |||||||  ||||||| |||    
T  2467281 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgc 2467182  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||  | || ||| |||||||||||||||   |   ||||||||||| ||||||||| |||||    
T  2467181 gcatgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaag 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 6100419 - 6100583
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||| ||||||||| || |||||| ||| ||||||| |||| ||| | | |||||||| ||||||| ||||||| ||||||| |||    
T  6100419 aaccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 6100518  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||   |||||| |||||||||||||||   | |||| ||| ||||||||||| || |||||    
T  6100519 gcatgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaaag 6100583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 8997707 - 8997543
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| |||  |||||||||||| ||||||||| ||| ||| |||||||| ||| | | |||||||| | | || ||||||||||| |||| | |    
T  8997707 aaccaagttgcttggactccagtggcaaggaactcctttcaaggacatattcggggaataccgtgttcgattcctaaggggaacaacgtttcgccagttc 8997608  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| ||||| |||||||||   |||||||||| |||| ||||||||| |||||    
T  8997607 gcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaag 8997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 38922577 - 38922457
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||| | |||||||| ||||||| |||    
T  38922577 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgc 38922478  T
Q  113 gcatgcatttacgcacgagcc 133  Q
    |||||| ||||||||||||||    
T  38922477 gcatgcctttacgcacgagcc 38922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 18373961 - 18374115
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcat 116  Q
    |||||| ||| |||||| |||||| || ||| |||||||||  ||| |||||||| |   ||||||||  |||| ||||||||| ||| ||| |||||||    
T  18373961 aagttgtttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcat 18374060  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    || | |||||| |||||||||||||||   | |||||||| ||||||||||||||    
T  18374061 gcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtg 18374115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 45521111 - 45521279
Alignment:
Q  9 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggcca 108  Q
    |||| |||||||||| ||| ||||||||||||| ||  || |||||| || |||  |||| ||| | | |||||||| ||||| |||||||  |||  ||    
T  45521111 atatcaaccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccaggggaacaacacttgatca 45521210  T
Q  109 ttgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     ||||||||| | |||||| ||||||||||||||||  | ||||| || |||| ||||||||| |||||    
T  45521211 gtgcgcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 45521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 43032853 - 43033012
Alignment:
Q  19 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatg 117  Q
    ||||| ||| ||||||||||||| ||  |||||||||| | ||||  |||||||   |  ||||||| ||||| | ||||||| ||||||| ||||||||    
T  43032853 agttgtttgggctccagtggcaaggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatg 43032952  T
Q  118 catttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    | | ||| |||||||||||||||||||  | |||||||| |||  ||||||||| |||||    
T  43032953 cctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 43033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 44893441 - 44893310
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||| ||||| | || |||||| | ||||||| ||     
T  44893441 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgt 44893342  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||| | |||||||||||||||||| ||||    
T  44893341 gcatgcctctacgcacgagccggattaatcgc 44893310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 583761 - 583890
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| |||| |||||||| || || ||||||| |||||| ||| ||||| | | |||||||| | ||| |||||||| ||| ||| ||||    
T  583761 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctagg-gaacaacgcttgaccagtgcg 583859  T
Q  114 catgcatttacgcacgagccggattagtcgc 144  Q
    ||||| | |||||| ||| ||||||||||||    
T  583860 catgcctctacgcatgagtcggattagtcgc 583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 10927553 - 10927683
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||| ||||||||| || || ||| ||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||||||| |||    
T  10927553 aaccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 10927652  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||||||||||||||    
T  10927653 gcatgcctctacgcatgagccggattagtcg 10927683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 24837189 - 24837319
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || ||||||||||  |||||  |||| ||| | | |||||||| ||| ||||||||||| ||||||| ||     
T  24837189 aaccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgt 24837288  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
     ||||| | || |||||||| ||||||||||    
T  24837289 tcatgcctctaagcacgagcaggattagtcg 24837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 17981392 - 17981552
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcat 116  Q
    |||||| ||| ||||||||||||| || |||||||||| || |||  |||||||| | | |||||||| ||| || |||||||  ||| ||| || ||||    
T  17981392 aagttgcttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcat 17981491  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    || | |||||||||| || |||||| ||  | |||||||| |||| ||||||||| |||||    
T  17981492 gcctctacgcacgagtcgaattagttgcccagctttggtgagtcggaaaccggtgcgaaag 17981552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 7673816 - 7673657
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||  ||| |||    |||||||||    || |||||||||||||| | || |    
T  7673816 aaccaagttgcttg-gctccagtggcaaggagctccttccaaggacgtatctggggaatatcaagttcgattag--ggggaacaacgtttggctagtgtg 7673720  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    ||||| | |||||||||||||||||  ||||  |||||| |||  ||||||||||||| ||||    
T  7673719 catgcctctacgcacgagccggatttttcgcccatctttagtggatcgaaaaccggtgcgaaa 7673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 17845680 - 17845764
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaac 99  Q
    |||||||||| ||| |||||||||||||||| |||||||||| || ||| ||||| ||| ||| ||| |||| ||||| |||||||    
T  17845680 aaccaagttgtttgggctccagtggcaatgagctccttccaaggatgtactcggggaatactg-gtttgattcccaggggaacaac 17845764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 34613941 - 34613836
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||| ||| ||| |||||||||||||||| |||||||||||  ||||| |||| |||   | |||||||| |||||| ||||||||| |||||| | |    
T  34613941 aaccaaattgtttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtac 34613842  T
Q  113 gcatgc 118  Q
    ||||||    
T  34613841 gcatgc 34613836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 2964103 - 2964187
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||||||| || |||||| | ||||||||| |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  2964103 gaacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 2964187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 16893884 - 16894046
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||  |||||||| ||||||||||||| ||||||| |||| |||   | ||||||||  || || ||| |||| ||||||| | |    
T  16893884 aaccaagttgcttgggctatagtggcaaggaactccttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtac 16893983  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     ||||| |||||||| |||||||||| |||||  | |||||||| |||| ||||||||| |||||    
T  16893984 acatgcctttacgcatgagccggatt-gtcgcccacctttggtg-gtcggaaaccggtgcgaaag 16894046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 44031599 - 44031467
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggcc-----attg 111  Q
    |||||| |||||||| |||||||| ||||||||||||| || |||  ||||||||   | |||||||||||| || |||||||| ||||||     | ||    
T  44031599 aagttgtttgagctctagtggcaaggaactccttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtgtagtg 44031500  T
Q  112 cgcatgcatttacgcacgagccggattagtcgc 144  Q
     |||||| | | |||||||||||||||||||||    
T  44031499 tgcatgcctctgcgcacgagccggattagtcgc 44031467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 13085471 - 13085602
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||| ||| ||| ||||||||||| | || |||||||||| ||||||| |||| ||| | | ||||||||  ||| | ||||||||||| |||| ||     
T  13085471 aaccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgt 13085570  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    |||| | | |||||||||||| ||||| ||||    
T  13085571 gcatacctctacgcacgagccagattaatcgc 13085602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 33401958 - 33401831
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcat 116  Q
    |||||| ||| ||||||||||||| || |||||| ||| |||||| ||||| ||| | | ||||||||| || || |||||||  ||| ||| || ||||    
T  33401958 aagttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcat 33401859  T
Q  117 gcatttacgcacgagccggattagtcgc 144  Q
    || | |||||| ||| ||||||||||||    
T  33401858 gcctctacgcatgagtcggattagtcgc 33401831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 1013140 - 1013014
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || ||  |||||| ||||||| |||| ||| | | |||||||| ||| || |||||||| ||||||| | |    
T  1013140 aaccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtac 1013041  T
Q  113 gcatgcatttacgcacgagccggatta 139  Q
     ||||| | |||||| |||||| ||||    
T  1013040 acatgcctctacgcatgagccgaatta 1013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 13358039 - 13357989
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 143  Q
    |||||||||||||||| || |||||| | || |||||||||||||||||||    
T  13358039 gaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcg 13357989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 22212579 - 22212514
Alignment:
Q  112 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||| | |||||||| ||||||||||||||  | ||||||||  ||||||||||||| |||||    
T  22212579 cgcatgcttctacgcacgggccggattagtcgctcacctttggtggttcgaaaaccggtgcgaaag 22212514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 16291250 - 16291202
Alignment:
Q  129 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||| |||||||||||  | |||||||| ||||||||||||||||||||    
T  16291250 gagctggattagtcgctcacctttggtgggtcgaaaaccggtgtgaaag 16291202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 26570951 - 26571035
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||||||| || | |||||| |||||| |||||||||||||||   | ||||| || |||| |||||| ||||||||    
T  26570951 gaacaacgcttggccagtgtgtatgcatctacgcatgagccggattagtcgtccacctttgatgagtcggaaaccgatgtgaaag 26571035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 8e-27; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 24166398 - 24166527
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 112  Q
    |||||||||||||| ||||||||||||| || |||||||||| |||||| ||||| ||| ||| |||||||| || |||  ||||||||||||||| |||    
T  24166398 aaccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgc 24166497  T
Q  113 gcatgcatttacgcacgagccggattagtc 142  Q
    |||||| | |||||||||||| ||||||||    
T  24166498 gcatgcctctacgcacgagccagattagtc 24166527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 38165975 - 38166139
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||| |||| ||| ||| ||| |||| ||||| | ||||||| ||||||| |||    
T  38165975 aaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgc 38166074  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||  | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  38166075 gcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38166139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 1446774 - 1446904
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  1446774 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1446873  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||||||||||||||    
T  1446874 gcatgcctctacgcatgagccggattagtcg 1446904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 2559255 - 2559421
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||   ||| ||| | |  ||||||||| |||| |||||||| ||||||| |||    
T  2559255 aaccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgc 2559354  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    |||||| | ||||||| |||||||||| |||   | |||||||| |||| ||||||||| |||||||    
T  2559355 gcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaagaa 2559421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 29895735 - 29895865
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  29895735 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 29895834  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||||||||||||||    
T  29895835 gcatgcctctacgcatgagccggattagtcg 29895865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 53599008 - 53599134
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||||| ||||||||||||||| |||    
T  53599008 aaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgc 53599107  T
Q  113 gcatgcatttacgcacgagccggatta 139  Q
    |||||| | |||||| |||||||||||    
T  53599108 gcatgcctctacgcatgagccggatta 53599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 1940937 - 1940782
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| |||||||| || |||||||||| ||||||  ||||||||   | |||||||| ||||| | ||||||| ||||    |||    
T  1940937 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttggg---tgc 1940841  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||||| | |||||||||||||||||||||||  | |||||||| ||||||||||||||    
T  1940840 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtg 1940782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 47078406 - 47078570
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| | ||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  47078406 aaccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 47078505  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     ||||| | |||||||||||||||||||||||  | | |||||| |||| ||||| ||| |||||    
T  47078506 acatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaag 47078570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 15840082 - 15839967
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 128  Q
    ||||||||||||| || |||||||||| |||||| | ||| ||| | | |||||||| | || |||| |||||||||||| ||||||||| | ||||||     
T  15840082 gctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcctagaagaataacgtttggccagtgcgcatgcctctacgcat 15839983  T
Q  129 gagccggattagtcgc 144  Q
    ||||||||||||||||    
T  15839982 gagccggattagtcgc 15839967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 27248376 - 27248540
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||| | |||||| |||||||| |||||||  ||    
T  27248376 aaccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gc 27248473  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    |||||| | |||||| ||||| ||||||||||  | |||||||  |||  |||| ||||||||||||    
T  27248474 gcatgcctctacgcaggagccagattagtcgcccacctttggtaggtcagaaactggtgtgaaagaa 27248540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 48317438 - 48317307
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| ||||||||||  |||| |||  |||||||| ||||| |||||||| |||| || ||     
T  48317438 aaccaagttgcttgggctccagtggcaaagagctcattccaatgacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgt 48317339  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    | |||| | |||||||||||||||||||||||    
T  48317338 gtatgcctctacgcacgagccggattagtcgc 48317307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 43458561 - 43458691
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||||||||||  | ||| |||||| |||||||| ||| ||| |||  ||||||| |||||| ||| |||| ||||||| |||    
T  43458561 aaccaagttgcttgggctccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgc 43458660  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||| |||||||||||||||||    
T  43458661 gcatgcctctacggacgagccggattagtcg 43458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 29588687 - 29588812
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 115  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||   |||||||| | | |||||||| ||||| | ||||| | ||||| | ||||||    
T  29588687 caagttgattgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgca 29588786  T
Q  116 tgcatttacgcacgagccggattagt 141  Q
    ||| | ||||||||||||||||||||    
T  29588787 tgcctctacgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 5473007 - 5472847
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 116  Q
    |||||| ||| ||||||||||||| || ||| || ||| ||||||| |||| ||| |   ||| ||||  |||| ||| ||||| ||||||| |||||||    
T  5473007 aagttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcat 5472908  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    || | |||||||||||||||||||||||  | |||||||| ||||||||| |||| |||||    
T  5472907 gcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaaag 5472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 42722708 - 42722576
Alignment:
Q  46 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||||||| ||||||  |||||||| | | |||| ||| ||||||| ||||||| ||||||| ||||||||| | |||||| |||||||||||||||     
T  42722708 ctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgt 42722609  T
Q  145 atatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
      | |||| ||| |||||||||||||| |||||    
T  42722608 tcacctttagtgggtcgaaaaccggtgcgaaag 42722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 49260806 - 49260698
Alignment:
Q  36 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgcacgagccg 134  Q
    |||||| ||||||||||||| || |||| |||| ||| |||| ||| ||| ||| || |||||||| ||||||| ||||||||| | |||||||||||||    
T  49260806 tggcaaggaactccttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccg 49260707  T
Q  135 gattagtcg 143  Q
    |||||||||    
T  49260706 gattagtcg 49260698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 3574609 - 3574478
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||    || ||| | |||||| ||| ||| ||||||||||  ||||||| |||    
T  3574609 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgc 3574510  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||| | |||||||||| ||||||||||||    
T  3574509 gcatgcctctacgcacgagtcggattagtcgc 3574478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 7246776 - 7246645
Alignment:
Q  47 tccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 145  Q
    ||||||||| ||||||  |||| ||| ||| |||||||| | || | |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||     
T  7246776 tccttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcc 7246677  T
Q  146 tatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     | |||||||| |||| ||||||||| |||||    
T  7246676 cacctttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 13073486 - 13073649
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| ||||||||||| |||||||||| ||||||   ||  ||| | |||||||||| ||| || |||||| ||||||||| |||    
T  13073486 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgc 13073585  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    |||| | | |||||| || || |||||||||  || |||||||| |||| ||||||||| ||||    
T  13073586 gcatacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 21192622 - 21192752
Alignment:
Q  46 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 145  Q
    |||||||||| |||||||| ||||||| | | |||||| ||||  | |||||||||| ||||| ||||||||| | |||||||||| ||||||| ||||     
T  21192622 ctccttccaatgacgtatttgggaaataccgggttcgagttccgag-gaacaacgttgggccagtgcgcatgcctctacgcacgagtcggattaatcgcc 21192720  T
Q  146 tatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     |  ||||||| |||||||||||||| |||||    
T  21192721 cacatttggtgagtcgaaaaccggtgcgaaag 21192752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 41163045 - 41162914
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||| ||| || |||||||||| ||||||| |||||||| | ||||||||||||||| | |||||||  ||||||| ||     
T  41163045 aaccaagttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgt 41162946  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
     ||||| | || ||| |||||| |||||||||    
T  41162945 acatgcttctatgcatgagccgaattagtcgc 41162914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 47682531 - 47682381
Alignment:
Q  27 gagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgc 126  Q
    ||||||||| | ||| |||||||||| |||||||||| |||  |||  ||| || ||||  |||| ||| |||||||||||| ||| ||||  | |||||    
T  47682531 gagctccagggacaaggaactccttctaaagacgtatccggagaatattgaatttgattctcaggggaataacgtttggccagtgcacatgtctctacgc 47682432  T
Q  127 acgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||| ||||||||  | |||||||| |||| ||||||||| |||||    
T  47682431 acgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaag 47682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 49952308 - 49952178
Alignment:
Q  15 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcg 113  Q
    ||||||||| | ||| |||| |||||| || |||||||||| ||||||||||||||||  |  ||| ||||| ||| || |||||||||||| || ||||    
T  49952308 accaagttgttggagttccattggcaaggagctccttccaaggacgtattcgggaaatattaggtttgattttcagaagaaacaacgtttggtcagtgcg 49952209  T
Q  114 catgcatttacgcacgagccggattagtcgc 144  Q
    || || | |||||| ||||||||||||||||    
T  49952208 cacgcctctacgcatgagccggattagtcgc 49952178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 55005448 - 55005338
Alignment:
Q  35 gtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagcc 133  Q
    |||||||||| ||||||||||||||||||  ||||||| | || |||||||  |||| ||| ||||| ||| ||||||||||||| | ||||||| || |    
T  55005448 gtggcaatgagctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctctacgcacaagtc 55005349  T
Q  134 ggattagtcgc 144  Q
    |||||||||||    
T  55005348 ggattagtcgc 55005338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 17080071 - 17080155
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||| | ||||| ||  ||||||||||||| |||||    
T  17080071 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaag 17080155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 55920982 - 55921146
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||| |  |||| ||| | | |||||||| ||| || |||||||  |||| || |||    
T  55920982 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 55921081  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||| | ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  55921082 gcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 55921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 33647669 - 33647832
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| |||||||| || |||||| ||| |||||||  ||| ||| | | |||||||||||| ||||||||||| ||| ||| |||    
T  33647669 aaccaagttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgc 33647768  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
     ||| | | ||||||||| || |||||||||   ||||||||||  ||| ||||||||| ||||    
T  33647769 acattcctctacgcacgaaccagattagtcgttcatctttggtggatcggaaaccggtgcgaaa 33647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 36262917 - 36262799
Alignment:
Q  25 ttgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttac 124  Q
    |||||||||||||||||  | |||||||||| ||||||  |||  ||| | | |||||||| ||||| |||||||| ||||||| ||| ||||| | |||    
T  36262917 ttgagctccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattcccagg-gaacaacgcttggccagtgcacatgcctctac 36262819  T
Q  125 gcacgagccggattagtcgc 144  Q
    ||||||| ||||||||||||    
T  36262818 gcacgagtcggattagtcgc 36262799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 295680 - 295566
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 128  Q
    ||||||||||||| |||| ||||| || ||||||| |||| ||| |    ||||||| ||||  |||||||||||||||| ||||||||| | |||||||    
T  295680 gctccagtggcaaggaacaccttctaaggacgtatccggggaataccagattcgattcccagaggaacaacgtttggccagtgcgcatgcctctacgcac 295581  T
Q  129 gagccggattagtcg 143  Q
    || || |||||||||    
T  295580 gaaccagattagtcg 295566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 20354601 - 20354715
Alignment:
Q  30 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcac 128  Q
    |||||||||||| || |||||||||| |||| | |||  |||| | ||||| |||||||||| ||||||||| ||||| | ||||||||| | ||||||     
T  20354601 ctccagtggcaaggatctccttccaaggacgaactcgaaaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcat 20354700  T
Q  129 gagccggattagtcg 143  Q
    ||| |||||||||||    
T  20354701 gagtcggattagtcg 20354715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 20532510 - 20532441
Alignment:
Q  76 gagttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||| | |||||| ||||||||| ||||||    
T  20532510 gagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgc 20532441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 40781009 - 40780861
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgcatgcatttacgca 127  Q
    ||||||||||||| || || |||  || ||||||||||| ||||   | |||||||| || ||| |||||||| |||| || ||||||||| | ||||||    
T  40781009 gctccagtggcaaggagcttcttttaaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgca 40780910  T
Q  128 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
     |||||||||||||||   | |||||||| |||| ||||||||| ||||    
T  40780909 tgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 3159597 - 3159474
Alignment:
Q  49 cttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcata 147  Q
    ||||||| ||||||| |||  ||| | | |||||| ||||||| | ||||||| ||||||| ||||||||| | |||||||||||| ||||||||||  |    
T  3159597 cttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctca 3159498  T
Q  148 tctttggtgtgtcgaaaaccggtg 171  Q
     | |||||| |||| |||||||||    
T  3159497 ccattggtgggtcggaaaccggtg 3159474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 12703708 - 12703577
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| ||  |||||| || |||||| ||| | ||| ||||||||||||||||| | |||||||| ||| ||| ||     
T  12703708 aaccaagttgcttgggctccagtggcaaggagatccttcaaaggacgtactcgaggaatactgagttcgatttccagtgggaacaacgcttgaccagtgt 12703609  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    | |||  | ||||||  |||||||||||||||    
T  12703608 gtatgtctctacgcataagccggattagtcgc 12703577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 14567274 - 14567353
Alignment:
Q  100 gtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    |||||||| |||| ||| ||||| |||||||    
T  14567274 gtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaa 14567353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 20128273 - 20128387
Alignment:
Q  30 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 128  Q
    |||||| ||||| ||  ||||||||| ||||||| |||| ||| ||| ||||||||  |||| | ||||| | ||||||| ||||||||| |||||||||    
T  20128273 ctccagcggcaaggagttccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcac 20128372  T
Q  129 gagccggattagtcg 143  Q
    ||||  |||||||||    
T  20128373 gagctagattagtcg 20128387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 38075381 - 38075507
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||| ||||| ||  ||||||||| |||||||||||  ||| | | ||||||||  |||| | ||||||| ||||||| |||    
T  38075381 aaccaagttgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgc 38075480  T
Q  113 gcatgcatttacgcacgagccggatta 139  Q
    |||||| | |||||| |||||| ||||    
T  38075481 gcatgcctctacgcatgagccgaatta 38075507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 19651608 - 19651559
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 63  Q
    |||||||||| ||| |||||||||||||||| |||||||||| |||||||    
T  19651608 aaccaagttgtttgggctccagtggcaatgagctccttccaaggacgtat 19651559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 20421727 - 20421847
Alignment:
Q  19 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatg 117  Q
    ||||| ||| ||| ||||||||| || |||||| |||||||||||  ||| ||| ||| |||||||||||| || |||||||  ||||||| ||||||||    
T  20421727 agttgcttgggcttcagtggcaaggagctcctttcaaagacgtatctggggaatactg-gttcgatttccagggggaacaacacttggccagtgcgcatg 20421825  T
Q  118 catttacgcacgagccggatta 139  Q
    | | |||||| ||||| |||||    
T  20421826 cctctacgcatgagccagatta 20421847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 8424582 - 8424654
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaa 165  Q
    |||||||||||||||| ||||||||| | || |||||||||  |||| ||||  |||||||||| ||||||||    
T  8424582 gaacaacgtttggccagtgcgcatgcctctatgcacgagccaaattaatcgctcatctttggtgggtcgaaaa 8424654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 8888970 - 8889134
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| || ||||| || ||||||| || ||||||| |||| ||| | | |||||||| | ||| | ||||||  |||| || |||    
T  8888970 aaccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgc 8889069  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||  | |||||| |||||||||||||||   | |||||||| |||| |||||||||| ||||    
T  8889070 gcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgtaaaag 8889134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 14124044 - 14124128
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||| |||||||| ||||||||| | ||| |||||||||||||||||||  | | |||||| || | ||||||||| |||||    
T  14124044 gaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 14124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 30317261 - 30317345
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||||||| | || |||| | ||||||||||||| |||||||||  | |||||||| |||| |||||| ||||||||    
T  30317261 gaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaaccgatgtgaaag 30317345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 48015203 - 48015108
Alignment:
Q  47 tccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 141  Q
    ||||||||||||||||  || | ||| | | |||||||| |||| | |||||||| ||||||| |||||| || | ||||||||||||||||||||    
T  48015203 tccttccaaagacgtacccgaggaataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagt 48015108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 54946296 - 54946363
Alignment:
Q  112 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    ||||||| | |||||| ||||||||||||||||  ||| |||||| |||| ||||||| |||||||||    
T  54946296 cgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccggcgtgaaagaa 54946363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 50485968 - 50486022
Alignment:
Q  90 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    ||||||||||| |||||||   ||||||| | |||||||||||||||||||||||    
T  50485968 ggagaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgc 50486022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 4736545 - 4736582
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactcctt 51  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  4736545 aaccaagttgtttgagctccagtggcaatgagctcctt 4736582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 4738630 - 4738730
Alignment:
Q  78 gttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    ||||||||||||||| |||||||| || |||| ||||||||  | |||||| |||| | ||||||||   | |||||||| |||| ||||||||| ||||    
T  4738630 gttcgatttccaggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4738729  T
Q  177 g 177  Q
    |    
T  4738730 g 4738730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 38841528 - 38841472
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaa 70  Q
    |||||||||  ||||||| |||||||||||| || ||||||| |||||| |||||||    
T  38841528 aaccaagttacttgagcttcagtggcaatgagcttcttccaaggacgtactcgggaa 38841472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 14107521 - 14107357
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || ||||||||||||||||||||||| ||| | | |||||||| |||||| |||||||| ||| ||| |||    
T  14107521 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgc 14107422  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     ||||| | |||||| ||||||||||||||||  ||  || ||| |||| ||||||||| |||||    
T  14107421 acatgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaag 14107357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 21898595 - 21898759
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  21898595 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 21898694  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  21898695 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 21898759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 2271464 - 2271336
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||||||| ||| | | ||||||||  || |||||||||| || |||| ||||    
T  2271464 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctca-gagaacaacgcttagccagtgcg 2271366  T
Q  114 catgcatttacgcacgagccggattagtcg 143  Q
    ||||  | ||||||||||||||||||||||    
T  2271365 catgtctctacgcacgagccggattagtcg 2271336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 29333301 - 29333172
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| |||| ||||||||||| |||||||||| ||||||  | || ||| | | |||||||||||||| |||||||||||||||| ||||    
T  29333301 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatttccaggggaacaacgtttggccagtgcg 29333202  T
Q  114 catgcatttacgcacgagccggattagtcg 143  Q
    ||||| | |||||| |||||| || |||||    
T  29333201 catgcctctacgcatgagccgaatcagtcg 29333172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 5253386 - 5253222
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  5253386 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 5253287  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  5253286 gcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaag 5253222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 8938658 - 8938824
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||| ||| || |||||||||||||| ||| |||| ||| ||  |||||||| |||||| |||||||  ||| ||| |||    
T  8938658 aaccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgc 8938757  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    ||| |||| |||||| |||||| ||||||||   | ||||| || |||| ||||||||| |||||||    
T  8938758 gcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaagaa 8938824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 12606399 - 12606541
Alignment:
Q  36 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccg 134  Q
    ||||||||| ||||||||||  |||||| |||| ||| |    ||||||||||||| | ||||||||||||||| ||||||||| | |||||||||||||    
T  12606399 tggcaatgagctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccg 12606498  T
Q  135 gattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||||  | |||||||| |  | ||||||||| |||||    
T  12606499 gattagtcgcccacctttggtgagctggaaaccggtgcgaaag 12606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 3601034 - 3601195
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 115  Q
    ||||||| ||| |||| |||||||| || ||| ||||||| ||||||||||| ||| | |  |||||||  |||| | ||||||| ||||||| ||||||    
T  3601034 caagttgcttgggctctagtggcaaagagctctttccaaatacgtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgca 3601133  T
Q  116 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||| | ||| ||||||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  3601134 tgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 3601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 9633708 - 9633624
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||||||| ||||||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 9633624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 13391299 - 13391391
Alignment:
Q  79 ttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||||||| |||| |||||| ||||||||| ||||||||| | |||||||||||||||||||||||  || |||  || ||||||||||||||    
T  13391299 ttcgattttcaggggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccatatttaatgggtcgaaaaccggtg 13391391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 30788936 - 30788852
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||||||||||| ||||||||| | || ||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  30788936 gaacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 30788852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 13036164 - 13036037
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgca 115  Q
    ||||||| ||| ||||||||||||| || |||||||||| |||||||||||| |||   | ||||||||| || || |||||||  ||||||| ||||||    
T  13036164 caagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgca 13036065  T
Q  116 tgcatttacgcacgagccggattagtcg 143  Q
    ||| | |||||| ||||| |||||||||    
T  13036064 tgcctctacgcatgagccagattagtcg 13036037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 19230720 - 19230592
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||| |||||||   | || |||||||| || | |||||||| |||| || |  |    
T  19230720 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaataccgga-ttcgattttcaagggaacaacgcttggtcagtatg 19230622  T
Q  114 catgcatttacgcacgagccggattagtcg 143  Q
    ||||| | ||||||||||||||||||||||    
T  19230621 catgcctctacgcacgagccggattagtcg 19230592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 29444928 - 29444775
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||  ||| |||| |||||||| || |||||||||||||||||  ||||  || | | |||||||||| ||| | ||||||| ||||||| |||    
T  29444928 aaccaagttacttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgc 29444829  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaac 166  Q
    |||||| | |||||| ||||||||||||| |   |||||||||| |||| ||||    
T  29444828 gcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaac 29444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 8612137 - 8611973
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||| ||| ||     
T  8612137 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 8612038  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  8612037 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 8611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 19089444 - 19089609
Alignment:
Q  13 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 111  Q
    ||||||||||| ||| |||||||| |||| || ||| || ||| ||||||| || | ||| |   ||| |||| ||||| | ||||||  ||||||| ||    
T  19089444 gaaccaagttgcttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtg 19089543  T
Q  112 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     |||||| | ||||||||||||||||||||||  || |||||||| |||| ||||||||| |||||    
T  19089544 agcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaag 19089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 5759575 - 5759623
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 62  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  5759575 aaccaagttgcttgggctccagtggcaaggaactccttccaaggacgta 5759623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 6606260 - 6606096
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||  ||||||||| || |||||||||| ||||||| |||| ||| | | ||||||||  |||| | ||||||  ||||||| ||     
T  6606260 aaccaagttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgt 6606161  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     ||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  6606160 acatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 6606096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 8932608 - 8932772
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| |||| |||||||||||| ||  ||||||||| || |||| |||| |||   | |||||||| ||| || |||||||  ||||| | |||    
T  8932608 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8932707  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| ||||||||||| || |  | ||||| || |||| ||||||||| |||||    
T  8932708 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8932772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 8944074 - 8944238
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| |||| |||||||||||| ||  ||||||||| || |||| |||| |||   | |||||||| ||| || |||||||  ||||| | |||    
T  8944074 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8944173  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| ||||||||||| || |  | ||||| || |||| ||||||||| |||||    
T  8944174 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8944238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 5029841 - 5029928
Alignment:
Q  90 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||||||||||| || ||||||||| | |||||| |||  |||||||||||  ||||||| || |||| |||| |||| |||||    
T  5029841 ggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaag 5029928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 12635793 - 12635925
Alignment:
Q  46 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||||||| ||||||| |||| ||| |   ||| |||| ||||| ||| ||||| ||||| | ||||||||| | ||||||| |||||||||||||||    
T  12635793 ctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgc 12635892  T
Q  145 atatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
      |   |||||| |||| ||||||||| |||||    
T  12635893 ccactattggtgggtcggaaaccggtgcgaaag 12635925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 5855466 - 5855596
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||||||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  5855466 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5855565  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| ||| |||||||||||    
T  5855566 gcatgcctctacgcatgaggcggattagtcg 5855596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 10422732 - 10422896
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||| ||||||||| || |||||||||| |||||||||||| ||| | | |||||||||| |||| |||||||  ||||||| |||    
T  10422732 aaccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgc 10422831  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| |||||||||||||||   | |||||||  |||| ||||||||| |||||    
T  10422832 gcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaag 10422896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 14254416 - 14254302
Alignment:
Q  30 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 128  Q
    |||||| ||||| |||||| |||||| |||||||||||| ||| | ||||||||||| |||| | ||||||| ||||||| | ||||||| ||||||||     
T  14254416 ctccaggggcaaggaactcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcat 14254317  T
Q  129 gagccggattagtcg 143  Q
    |||||||||||||||    
T  14254316 gagccggattagtcg 14254302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 40288641 - 40288487
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| |||||||| || ||| |||||| |||||||||||| ||| | | |||||||||||| || |||||||| ||||||| |      
T  40288641 aaccaagttgcttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtat 40288542  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 167  Q
    |||||| | ||| |||||||||||||||||||  ||| |||||| |||| |||||    
T  40288541 gcatgcctctacacacgagccggattagtcgctcatccttggtgggtcggaaacc 40288487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 9659327 - 9659179
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 128  Q
    ||||||||||||| || ||| ||| || |||||| ||||| ||| | | |||||||| ||||| |||||||||||| | | ||||||||| ||||||||     
T  9659327 gctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccaggggaacaacgtttgactagtgcgcatgcctttacgcat 9659228  T
Q  129 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||||||||||   | |||||||| || | ||||||||| |||||    
T  9659227 gagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaag 9659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 17642168 - 17642004
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||| ||| || |||||||||  ||||||  | |||||| ||| |||||||| ||||| | ||||||  ||||||| |||    
T  17642168 aaccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgc 17642069  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||||||||||||||||||||||   | |||||||| |||| |||| |||| |||||    
T  17642068 gcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 17642004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 11398052 - 11397889
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || |||| |||  ||| | | |||||||| | ||| |||||||||||||||| ||||    
T  11398052 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattccgaggggaacaacgtttggccaatgcg 11397953  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     |||| | |||||| ||| |||||||||||   | |||||||| |||| ||| ||||| |||||    
T  11397952 tatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaag 11397889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 49078058 - 49078188
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || ||||||| || ||||||| |||| ||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  49078058 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgc 49078157  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||||||||||||||    
T  49078158 gcatgcctctacgcatgagccggattagtcg 49078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 26660082 - 26660245
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| ||  | |||| || |||||||||||| ||| | | |||||||||||| || ||||||| ||||  || | |    
T  26660082 aaccaagttgcttgggctccagtggcaaagagtttcttcgaatgacgtattcggggaataccgggttcgatttccacggggaacaacatttgatcagtac 26660181  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  26660182 gcatgcctctacgcatgagccggattagtcgc-cacctttggtgggtcggaaaccggtgcgaaag 26660245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 32151082 - 32150922
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 116  Q
    |||||| ||| ||||||||||||| || |||||||||| ||||| |||| | |||     |||||||||||||| | |||||| ||||| || |||||||    
T  32151082 aagttgtttgggctccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcat 32150983  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    || |||||||| |||||| |||||||||  | ||||| || ||||||||||| || |||||    
T  32150982 gcctttacgcatgagccgaattagtcgctcacctttgatgggtcgaaaaccgatgcgaaag 32150922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 43959981 - 43959821
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 116  Q
    |||||||||| ||||||||||||| |  |||||||||| ||||||  |||| |||   | |||| ||| ||||| | ||||||| ||||||| |||||||    
T  43959981 aagttgattgggctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcat 43959882  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    || | |||||||||||||||||||||||  | |||| |||  ||| ||||||||| |||||    
T  43959881 gcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 43959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 2981095 - 2980965
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| |||||||| || |||||||||  ||||||| |||| ||| ||| |||||||| |||| | |||||||  ||||||| ||     
T  2981095 aaccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgt 2980996  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||||||| |||||||||||    
T  2980995 gcatgcctctacgcacgagtcggattagtcg 2980965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 17092641 - 17092511
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgc 112  Q
    |||||||||| |||| ||| ||||||||  | |||||| ||  ||||||||||||||||   ||||||||||| |||| ||| ||||| ||||||| ||     
T  17092641 aaccaagttgcttgaactctagtggcaagaagctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgt 17092542  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    | |||| | ||||||||||||||||||||||    
T  17092541 gtatgcctctacgcacgagccggattagtcg 17092511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 50371934 - 50371832
Alignment:
Q  78 gttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    ||||||||| ||||| |||||||| ||||||| | ||||||| | ||||||| |||||||||||||||  ||||||||||  ||| ||||||||| ||||    
T  50371934 gttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtcgcccatctttggtggatcggaaaccggtgcgaaa 50371835  T
Q  177 gaa 179  Q
    |||    
T  50371834 gaa 50371832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 16956417 - 16956574
Alignment:
Q  21 ttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgca 119  Q
    ||||||||||| || |||||| || |||||||||| ||||||  |||| ||| | | ||||| ||  |||| | ||||||||||| ||| |||||||||     
T  16956417 ttgattgagcttcaatggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcc 16956516  T
Q  120 tttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    | ||||||||||||||||||||| |  | |||||||| |||| ||||| ||| |||||    
T  16956517 tctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcgaaag 16956574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 18915806 - 18915975
Alignment:
Q  9 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggcc 107  Q
    |||| |||||||||| ||| ||| ||||||||| || || ||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||  ||||||    
T  18915806 atattaaccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggcc 18915905  T
Q  108 attgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    | || |||||| | |||||||||||||||||||||||  | | |||||| || | ||||||||| |||||    
T  18915906 agtgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 18915975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 46929901 - 46929772
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| |||| ||||||||  | ||||||||||||||||||  ||  |||   ||||||||||||||  ||||||||| ||||||| ||||    
T  46929901 aaccaagttgcttgggctctagtggcaagaagctccttccaaagacgtatctggagaatatcgagttcgatttccaaaagaacaacgcttggccaatgcg 46929802  T
Q  114 catgcatttacgcacgagccggattagtcg 143  Q
    ||||| |  || || |||||||||||||||    
T  46929801 catgcctccacacatgagccggattagtcg 46929772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 48798234 - 48798105
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| | | ||||||||||||| || |||||||||| ||||||| |||| |||   | |||||||||||| || |||||||| ||| | | |||    
T  48798234 aaccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgc 48798135  T
Q  113 gcatgcatttacgcacgagccggattagtc 142  Q
    |||||| | |||||| ||||||||||||||    
T  48798134 gcatgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 8763935 - 8764099
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||| ||||||| || |||||||||| ||||||  |||| |||   | ||||| || ||||| | ||||||  ||||||| |||    
T  8763935 aaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgc 8764034  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||||||||||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  8764035 gcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 21849304 - 21849212
Alignment:
Q  78 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 170  Q
    |||||||| ||||| |||||||| ||||| | ||||||||| | |||||||||||||||||||||||  |   |||||| |||||||||||||    
T  21849304 gttcgattcccaggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggt 21849212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 33004179 - 33004015
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgc 112  Q
    |||||||||| ||| |||||||||   | || |||||||||| ||||||| |||| |||   |  ||||||||||||| ||| ||| | ||||||| |||    
T  33004179 aaccaagttgcttgggctccagtgatgaggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgc 33004080  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||||||||||||||||||||| |  | |  ||||| |||||||||||||| |||||    
T  33004079 gcatgcctctacgcacgagccggattagtcacccaccaatggtgggtcgaaaaccggtgcgaaag 33004015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 41664019 - 41663856
Alignment:
Q  15 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcg 113  Q
    ||||||||| ||| ||||||||||||| || ||||||| || ||||||| |||| ||| | | |||||||| ||| || |||||||  |||| || ||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcg 41663920  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||| | |||||| |||| ||||||||||   | | |||||| |||| ||||||||| |||||    
T  41663919 catgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 30927875 - 30927761
Alignment:
Q  30 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcac 128  Q
    |||||||||||| || |||||||||| ||||||   |||||||   | ||||||||||||| | |||||||| ||||||| || |||||| | ||||||     
T  30927875 ctccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcat 30927776  T
Q  129 gagccggattagtcg 143  Q
    |||||||||||||||    
T  30927775 gagccggattagtcg 30927761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 33418279 - 33418149
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||  |||  ||| | |  ||||||| | | || | |||||| ||||||| |||    
T  33418279 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgc 33418180  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | || |||||||||||||||||||    
T  33418179 gcatgcctctatgcacgagccggattagtcg 33418149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 47313059 - 47312933
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 116  Q
    ||||||| ||| ||||||||||||| ||  ||||||||| |||||||  ||| ||| | | ||| |||| | ||| |||||||||||||||| |||| ||    
T  47313059 caagttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgattcctaggggaacaacgtttggccagtgcgtat 47312960  T
Q  117 gcatttacgcacgagccggattagtcg 143  Q
    || | |||||| ||||| |||||||||    
T  47312959 gcctctacgcatgagccagattagtcg 47312933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 2567223 - 2567386
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcga-tttccaggagaacaacgtttggccattgcgca 115  Q
    ||||||| ||| ||| || |||||| || |||||||||| |||||||||||  ||| | | |||||| ||||  ||| ||||||| ||||||| ||||||    
T  2567223 caagttgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgca 2567322  T
Q  116 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    ||| | ||| |||||| | |||||| ||   |||||||||| |||| ||||||||  |||||||    
T  2567323 tgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaagaa 2567386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 15465909 - 15466064
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||| ||| |  |||||||||| |||||||| ||| ||| |   |||||||||||| || |||||||| |||| || |||    
T  15465909 aaccaagttgtttgggctccagtgacaaagggctccttccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgc 15466008  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 168  Q
     ||||| | |||||||||| | |||| |||||  | |||||||| |||| ||||||    
T  15466009 acatgcctctacgcacgagtctgattggtcgctcacctttggtgggtcggaaaccg 15466064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 44969673 - 44969772
Alignment:
Q  78 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||  ||||||||||||| ||||||| || ||||||   |||||| |||||||||||||||   ||| ||||||  ||| |||||||||||||||    
T  44969673 gttcgattctcaggagaacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaaccggtgtgaaag 44969772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 37339846 - 37339928
Alignment:
Q  95 acaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| ||||||| ||||||||| |  ||||||||||||||||||||||  | |||||||| || | ||||||||| |||||    
T  37339846 acaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaag 37339928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 10173056 - 10172971
Alignment:
Q  92 agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||| ||||||| ||| ||||| | |||||| ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  10173056 agaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaag 10172971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 10336477 - 10336586
Alignment:
Q  31 tccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgcacg 129  Q
    ||||||||||| || |||||||||||||||||| |||  |||   | ||||||||| || || |||||||| ||| ||| ||||||||| | |||||| |    
T  10336477 tccagtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatg 10336576  T
Q  130 agccggatta 139  Q
    ||||||||||    
T  10336577 agccggatta 10336586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 26325756 - 26325920
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||| | | ||||||||||||| || |||||| ||| ||||||| || | |||   | |||||||| |||| | |||||||  |||| || |||    
T  26325756 aaccaagttgctagggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgc 26325855  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  26325856 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 4581757 - 4581682
Alignment:
Q  102 ttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||   | |||||||| |||| ||||||||| |||||    
T  4581757 ttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4581682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 32819 - 32945
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgcat 116  Q
    |||||| ||| |||||||||||||||| |||||||||| ||||||   ||| |||   | || ||||| |||||| |||||||| |||| || ||| |||    
T  32819 aagttgtttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacat 32918  T
Q  117 gcatttacgcacgagccggattagtcg 143  Q
    || | |||||| |||||| ||||||||    
T  32919 gcctctacgcatgagccgaattagtcg 32945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 13262091 - 13262157
Alignment:
Q  78 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 143  Q
    |||||||||||||| |||||||||||||| || | ||||||  | |||||||||| |||||||||||    
T  13262091 gttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcg 13262157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 14357703 - 14357865
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 116  Q
    |||||| ||||||||||||||||| ||  | ||||||| |||||||  || ||||     ||||||||||||   ||| ||||||||| ||| |||||||    
T  14357703 aagttgcttgagctccagtggcaaggagtttcttccaaggacgtatctggaaaatatcaggttcgatttccaattgaaacaacgtttgaccagtgcgcat 14357802  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    || | ||||||||| |||||||| |||  || | ||| || |||| ||||||||| |||||||    
T  14357803 gcctctacgcacgaaccggattaatcgtttaccattgatgggtcggaaaccggtgcgaaagaa 14357865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 16263553 - 16263619
Alignment:
Q  78 gttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 143  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| | ||||||  ||||||| ||||||    
T  16263553 gttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcg 16263619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 34877934 - 34878059
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||| ||||||||| || | |||||||| |||||||||||| ||| |   |||||||| | |||  |||||||  ||||||| |||    
T  34877934 aaccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgc 34878033  T
Q  113 gcatgcatttacgcacgagccggatt 138  Q
    |||||| | ||| |||||||| ||||    
T  34878034 gcatgcctctacacacgagccagatt 34878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 45362027 - 45361882
Alignment:
Q  33 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgag 131  Q
    ||||||||| || |||||||||| ||||||  | || ||| | | ||||||||  |||||| ||||||| ||||||| |||||||||   ||||||  ||    
T  45362027 cagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataag 45361928  T
Q  132 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  45361927 ccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 45361882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 17358615 - 17358507
Alignment:
Q  34 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagc 132  Q
    |||||||| || ||| || ||| |||||||| ||| ||| | | ||||||||  |||| ||||||||| ||| ||| ||||||||| |||||||| ||||    
T  17358615 agtggcaaggagctcatttcaaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatgcctttacgcatgagc 17358516  T
Q  133 cggattagt 141  Q
    | |||||||    
T  17358515 ccgattagt 17358507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 28416970 - 28417018
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 141  Q
    ||||||||||||||||  |||||||||| ||||||||| || |||||||    
T  28416970 gaacaacgtttggccagggcgcatgcatctacgcacgaacccgattagt 28417018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 31576713 - 31576553
Alignment:
Q  12 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 110  Q
    |||||||||||| ||| |||| |||||||| || ||| ||| || ||||||| | | |||| | | ||||||||  |||| | ||||| | ||||||| |    
T  31576713 tgaaccaagttgtttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttggccaat 31576614  T
Q  111 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||  ||| | |||||| ||||||| |||||||   ||||||| ||||||| |||||||||    
T  31576613 gcgtgtgcctctacgcatgagccggcttagtcgtccatctttgatgtgtcggaaaccggtg 31576553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 40226406 - 40226354
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcg 66  Q
    |||||||||||||| | | ||||||||| || |||||||||| ||||||||||    
T  40226406 aaccaagttgattgggtttcagtggcaaggagctccttccaaggacgtattcg 40226354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 8e-24; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 4195370 - 4195238
Alignment:
Q  9 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggcc 107  Q
    |||| |||||||||| ||| ||||||||||||| || ||||| |||| ||||||| |||| ||| | ||||||||||||||||| ||||||| ||||||     
T  4195370 atatcaaccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggct 4195271  T
Q  108 attgcgcatgcatttacgcacgagccggattag 140  Q
    | ||||||||| | |||||| ||||||||||||    
T  4195270 agtgcgcatgcctctacgcatgagccggattag 4195238  T

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Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 34659174 - 34659336
Alignment:
Q  16 ccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgc 114  Q
    |||||||| ||| ||||||||||||| || |||||||||  || |||  |||| ||| | | |||||||| || ||| |||||||| ||| ||| |||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgc 34659273  T
Q  115 atgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||| | |||||||||||||||||||||||  | | ||||||||||||||||||||| |||||    
T  34659274 atgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaag 34659336  T

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Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 48804629 - 48804793
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| || ||| |||||||  ||||||| |||    
T  48804629 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgc 48804728  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  48804729 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 48804793  T

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Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 5039581 - 5039423
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || ||||||||| ||| ||||||||| ||| | |||||||||| | |||| |||||||  |||| || |||    
T  5039581 aaccaagttgtttgggctccagtggcaaggagctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgc 5039482  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
     ||| | | |||||| ||||||||||||||||  | ||||||||  |||||||||||||    
T  5039481 acatacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtg 5039423  T

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Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 43346942 - 43346778
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 112  Q
    |||||||||| |||  |||||||||||| || ||||||||||||||||||  ||| ||| | | |||| ||| || ||| |||||||  ||||||  |||    
T  43346942 aaccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgc 43346843  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||| ||||||||||||||||||  |||||||||| |||| ||||| ||| |||||    
T  43346842 gcatgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaag 43346778  T

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Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 43862135 - 43861971
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| || ||||| || ||| ||||||||||||||  ||| ||| | | |||||||| ||||| | ||||||||||||||| |||    
T  43862135 aaccaagttgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgc 43862036  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| ||||||||||||||    | ||||||||  ||||||||||||| |||||    
T  43862035 gcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaag 43861971  T

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Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 1797409 - 1797564
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgca 115  Q
    ||||||| ||| ||||||||||||| || |||||||||| ||||||| || | ||| | | |||||||| ||||| ||| ||||| ||||||| ||||||    
T  1797409 caagttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgca 1797508  T
Q  116 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    ||  | ||||||||||||||| ||||||   ||||||| ||  |||||||||||||    
T  1797509 tgtctctacgcacgagccggactagtcgtccatctttgatggatcgaaaaccggtg 1797564  T

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Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 16802069 - 16802227
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    ||||||||||  || |||||||||||||||| |||||||||| ||||||  |||| ||| | |  |||||||   ||||| ||||||| ||||||| |||    
T  16802069 aaccaagttgcctgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgc 16802168  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    | |||| | |||||||||||||||||||||||  | | |||||| ||||||||| ||||    
T  16802169 gtatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgaaaactggtg 16802227  T

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Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 17748545 - 17748415
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| ||||||||  | || ||||||| |||||||||||| ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  17748545 aaccaagttgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 17748446  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||| |||||||||||||||||    
T  17748445 gcatgcctctacgtacgagccggattagtcg 17748415  T

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Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 5069975 - 5069814
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgca 115  Q
    ||||||| ||| ||||||||||||| || || |||| || ||||||  |||||||| | | ||||||||||||||| |||||||| || || | || |||    
T  5069975 caagttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgca 5069876  T
Q  116 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||| | ||||||| |||||||||||||||  | |||||||| |||| |||||| || |||||    
T  5069875 tgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 5069814  T

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Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 22993530 - 22993366
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| |||   | |||||||| | ||||| ||||||| ||||||| ||     
T  22993530 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgt 22993431  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||||||||| |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  22993430 gcatgcctctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaag 22993366  T

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Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 4228914 - 4228786
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||| ||||| || |||||||||| ||||||| || | ||| |   |||||||||||||||  |||||||||||||| |||     
T  4228914 aaccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgatttccagga--acaacgtttggccagtgca 4228817  T
Q  114 catgcatttacgcacgagccggattagtcgc 144  Q
    |||||   |||||| ||||||||||||||||    
T  4228816 catgcccctacgcatgagccggattagtcgc 4228786  T

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Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 13095804 - 13095962
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||| ||||||| || |||||| ||| ||||||  |||| ||| | | |||| ||| ||||| | ||||||  ||||||| |||    
T  13095804 aaccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgc 13095903  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||||||    
T  13095904 gcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtg 13095962  T

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Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 38578950 - 38578864
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||||    
T  38578950 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagaa 38578864  T

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Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 47341822 - 47341952
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| ||||||  |||| ||| | |||||||||| ||| || |||||||  ||||||| |||    
T  47341822 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgc 47341921  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | ||||||||||| ||||| ||||    
T  47341922 gcatgcctctacgcacgagcaggattggtcg 47341952  T

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Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 22573759 - 22573924
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| |||||||| ||||  | || ||||||||||  |||| ||| |||   | ||||||||| |||| ||||||| |||| ||| ||||    
T  22573759 aaccaagttgcttgggctccagtagcaagaagcttcttccaaagatatattgggggaatatcgggttcgattttcaggggaacaacatttgaccagtgcg 22573858  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    ||||| |||||||| ||||||||||| |||   ||| ||| || || ||||||||||| |||||||    
T  22573859 catgcctttacgcatgagccggattaatcgtccatcattgatgggttgaaaaccggtgcgaaagaa 22573924  T

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Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 10048039 - 10047875
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  10048039 aaccaagttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 10047940  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||| || | |||||| |||| | ||||||||   | | |||||| |||| ||||||||| |||||    
T  10047939 gcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 10047875  T

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Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 42210409 - 42210299
Alignment:
Q  30 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcac 128  Q
    |||||||||||| || ||| |||||| ||||||| || | ||| | |  ||||||| |||| || ||||||||||||||| ||||||||| | |||||||    
T  42210409 ctccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcac 42210310  T
Q  129 gagccggatta 139  Q
    |||||||||||    
T  42210309 gagccggatta 42210299  T

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Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 43925458 - 43925586
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||| || |||||||  |||| || |||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 43925557  T
Q  113 gcatgcatttacgcacgagccggattagt 141  Q
    |||||| | |||||| |||| ||||||||    
T  43925558 gcatgcctctacgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 11607080 - 11607131
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcggg 68  Q
    ||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||    
T  11607080 caagttgcttgggctccagtggcaaggaactccttccaaggacgtattcggg 11607131  T

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Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 26423450 - 26423288
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||||||||||  |||||||||||| ||||||  |  | ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  26423450 aaccaagttgtttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgc 26423351  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
     | ||| | |||||||||||| |||||||||   | |||||||| |||| ||||||||| ||||    
T  26423350 acctgcctctacgcacgagccagattagtcgttcacctttggtg-gtcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 27028289 - 27028392
Alignment:
Q  78 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    |||||||||||||| | ||||||  ||||||| ||||||||| | ||| || |||| |||||||||||  | |||||||| |||| ||||||||| ||||    
T  27028289 gttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 27028388  T
Q  177 gaag 180  Q
    ||||    
T  27028389 gaag 27028392  T

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Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 19914865 - 19914735
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||     | ||| ||| |||||||| |||   |||||||| ||||||| ||||    
T  19914865 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcgattcccaaaggaacaacgcttggccaatgcg 19914766  T
Q  114 catgcatttacgcacgagccggattagtcgc 144  Q
    ||||| | |||||| ||||| ||||| ||||    
T  19914765 catgcctctacgcatgagccagattaatcgc 19914735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 45853664 - 45853586
Alignment:
Q  33 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccatt 110  Q
    ||||||||| ||||||||||||| |||||||| ||  ||||| ||||||||||||||| |  ||||||| |||||||||    
T  45853664 cagtggcaaggaactccttccaaggacgtatttggagaatgccgagttcgatttccagtggaaacaacgattggccatt 45853586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 3353451 - 3353500
Alignment:
Q  94 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||||||||    
T  3353451 aacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcg 3353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 21530694 - 21530851
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||  ||||||||||||| || |||||||||| ||||||   ||| ||| ||| ||| |||| ||| || |||||||  |||| || |||    
T  21530694 aaccaagttgcttcggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgc 21530793  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 170  Q
     ||||| | ||||||||||||| |||| ||||  | |||||||| |||| ||||||||    
T  21530794 acatgcctctacgcacgagccgaattaatcgctcacctttggtgggtcggaaaccggt 21530851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 4706067 - 4705983
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||||| |||||| ||||||| | ||||||||||| ||||||||||   | |||||||   |||||||||| ||||||||    
T  4706067 gaacaacgtttagccattacgcatgcttctacgcacgagctggattagtcgtccacctttggtagatcgaaaaccgatgtgaaag 4705983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 14535252 - 14535368
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgca 127  Q
    |||||| |||||| ||||||||||||| |||||| || || ||| | | |||  |||| || ||||||||||  ||||||| || |||||| | ||||||    
T  14535252 gctccaatggcaaagaactccttccaaggacgtactccgggaataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgca 14535351  T
Q  128 cgagccggattagtcgc 144  Q
    ||||| |||||||||||    
T  14535352 cgagctggattagtcgc 14535368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 14650263 - 14650427
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| |||  ||| |||||||| || |||||||||| ||||||  |||  |||   | |||||||||||||||| ||||| | ||| ||| |||    
T  14650263 aaccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgc 14650362  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
      |||| | |||||| ||||||| ||||||||  | |||||||| || ||||||||||| |||||    
T  14650363 atatgcctctacgcatgagccgggttagtcgctcacctttggtgggttgaaaaccggtgcgaaag 14650427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 21190911 - 21190779
Alignment:
Q  46 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||||||| ||| ||| |||| ||| | | |||||||| | ||||| | ||||| ||||| | ||||||||| | |||||||||| | ||||||||||    
T  21190911 ctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtcgc 21190812  T
Q  145 atatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
      |||  ||||| |||||||||||||| |||||    
T  21190811 ccatcaatggtgggtcgaaaaccggtgcgaaag 21190779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 22268192 - 22268088
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| |||||| | ||| ||| | | |||||||| ||| || ||||||| |||||||| |||    
T  22268192 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgc 22268093  T
Q  113 gcatg 117  Q
    |||||    
T  22268092 gcatg 22268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 23658188 - 23658268
Alignment:
Q  77 agttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtg 156  Q
    ||||||||||||||| | ||||||| ||||||| || |||||| | ||| ||||||||||||||||||   ||||||||||    
T  23658188 agttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtg 23658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 28396226 - 28396166
Alignment:
Q  110 tgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 170  Q
    ||||||||| |||||||| |||||||||||||||  || |||||||| |||| ||||||||    
T  28396226 tgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 36619397 - 36619253
Alignment:
Q  34 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagc 132  Q
    |||||||| ||||||||| ||| |||||||| ||| ||| | | |||||||| ||||| | ||||||  ||| ||| || |||||| | |||||| ||||    
T  36619397 agtggcaaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagc 36619298  T
Q  133 cggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||||||   | | |||||| ||| |||||| |||||||||    
T  36619297 cggattagtcgtccaccattggtgggtcaaaaaccagtgtgaaag 36619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 37514899 - 37515031
Alignment:
Q  46 ctccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||||||| ||| ||  |||| ||| ||| ||||||||| ||| | ||||||||||||| || ||||||||  | |||||||||||||||||| |||     
T  37514899 ctccttccaaggacatacccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgt 37514998  T
Q  145 atatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
      | | || ||| |||| |||||||||||||||    
T  37514999 tcaccattagtgggtcggaaaccggtgtgaaag 37515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 41945503 - 41945583
Alignment:
Q  97 aacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||| ||||||| ||||||||| | ||||||||||||||||||||||   | |||||||| |||| ||| ||||| |||||    
T  41945503 aacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaag 41945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 45960165 - 45960035
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 112  Q
    |||||||||| |||||||||||| |||| || ||| |||||| |||||| ||||| ||| | ||||| |||| || |||  ||||||  |||| || |||    
T  45960165 aaccaagttgtttgagctccagtagcaaggagctctttccaaggacgta-tcggggaataccgagtttgattcccaagggcaacaacacttggtcagtgc 45960067  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||| | ||||||  |||||||||||||||    
T  45960066 gcatgcctctacgcataagccggattagtcgc 45960035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 30827302 - 30827368
Alignment:
Q  78 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 143  Q
    ||||||||| |||| ||||||||  ||||||| | ||||||| | ||||||||||||||||||||||    
T  30827302 gttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcg 30827368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 34127698 - 34127644
Alignment:
Q  123 acgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||||||||||||||||  | |||||||| ||| |||||||||| |||||    
T  34127698 acgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtgcgaaag 34127644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 42032041 - 42032170
Alignment:
Q  13 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattg 111  Q
    |||| |||||| ||| |||||||| ||||  | |||||||||| ||||||  |||| ||| |   |||||||| ||| || |||||||||||||||| ||    
T  42032041 gaactaagttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtg 42032140  T
Q  112 cgcatgcatttacgcacgagccggattagt 141  Q
    | ||| ||| |||||| |||||| ||||||    
T  42032141 cacatacatctacgcatgagccgaattagt 42032170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 1605951 - 1606051
Alignment:
Q  78 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    |||||||||||||| | ||||||| ||||||| ||| ||||| | || ||  ||||||||||||||||  | ||||||||  ||| ||||||||| ||||    
T  1605951 gttcgatttccagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtcgcccacctttggtggatcggaaaccggtgcgaaa 1606050  T
Q  177 g 177  Q
    |    
T  1606051 g 1606051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 8734769 - 8734685
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||| || ||||||||| |  ||||||||||| ||||||||||  | |||||||| |||| ||||||||| |||||    
T  8734769 gaacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 8734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 24969484 - 24969325
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 116  Q
    ||||||| ||| ||||||||||||| || ||  || ||| |||||||  || |||| | | |||||||||||||| |||||||  ||||||| ||||| |    
T  24969484 caagttgtttgggctccagtggcaaggagcttttttcaaggacgtatctggaaaataccgggttcgatttccagg-gaacaacacttggccagtgcgcgt 24969386  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    || | |||| || || ||||||| ||||  ||||||| ||  ||| ||||||||| |||||    
T  24969385 gcctctacgtacaagtcggattaatcgctcatctttgatggctcggaaaccggtgcgaaag 24969325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 34127783 - 34127735
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 62  Q
    |||||||||| ||| |||||| |||||| ||||||||||||| ||||||    
T  34127783 aaccaagttgcttgggctccaatggcaaggaactccttccaaggacgta 34127735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 8e-24; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 13893869 - 13894033
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||| | |||| ||| | | ||| |||||||||| | ||||||| |||| || |||    
T  13893869 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgc 13893968  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||| |||||||||||||||||||  | ||||||||  ||||||||||||| |||||    
T  13893969 gcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaag 13894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 7328787 - 7328950
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| |||||||| ||  ||||||||| ||||||  |||||||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  7328787 aaccaagttgcttgtgctctagtggcaaggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgc 7328886  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| || ||||| ||||||||||||||||  | |||||||| |||||||||||||| |||||    
T  7328887 gcatgcctt-acgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 7328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 15320129 - 15320293
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||||| ||||| ||||| | ||||||| ||     
T  15320129 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgt 15320228  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||||||||||||||||||||  | |||||||| |||  ||||||||| |||||    
T  15320229 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 15320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 33251605 - 33251735
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||| |||||||||| |||||||||| |||||||| ||| ||| | | |||||||| || | | |||||||||||||||| ||     
T  33251605 aaccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgt 33251704  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||||||||||||||    
T  33251705 gcatgcctctacgcatgagccggattagtcg 33251735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 29127862 - 29128026
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| ||  ||||||||| |||||||  ||| |||   | |||||||||||||| ||||||||  |||| || |||    
T  29127862 aaccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgc 29127961  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||| || |||||    
T  29127962 gcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 29128026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 54261169 - 54261333
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||   ||| ||| | | |||||||| | ||||| ||||||| ||||||| |||    
T  54261169 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 54261268  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  54261269 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 45877397 - 45877527
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || | |||||||| ||||||| |||| ||| | | |||||||||||||| | ||||||  ||||||| |||    
T  45877397 aaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgc 45877496  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
     ||||| | |||||| |||||||||||||||    
T  45877497 acatgcctctacgcatgagccggattagtcg 45877527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 55069843 - 55069685
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||| |||||| ||| || ||| ||||||||| || ||| ||| ||| |||| | |  | |||||||||||||||| |||    
T  55069843 aaccaagttgtttgggctccagtgacaatgagctcttttcaaggacgtattcagggaatactgggtttgattcctatagggaacaacgtttggccagtgc 55069744  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
     ||||| | |||||||||||||||||| ||||  | |||||||| |||| |||||||||    
T  55069743 acatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtg 55069685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 26362051 - 26361967
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||||||| || || |||||| | |||||||||||||||||||||||| | ||||| || |||| |||||||||||||||    
T  26362051 gaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaag 26361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 28572371 - 28572211
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 116  Q
    |||||| ||| ||||||||||||| || |||||| |||  ||| |  |||| ||| ||| |||||||| ||||| ||| ||||| ||||||| |  ||||    
T  28572371 aagttgcttgtgctccagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcat 28572272  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    || | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  28572271 gcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 28572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 6462358 - 6462485
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgca 115  Q
    ||||||| ||| |||| |||||||| || |||||||||| |||||||  ||| ||| | | ||||||||  |||| ||||||||| ||||||| ||||||    
T  6462358 caagttgcttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgca 6462457  T
Q  116 tgcatttacgcacgagccggattagtcg 143  Q
    ||| | |||||| |||||||||||||||    
T  6462458 tgcctctacgcatgagccggattagtcg 6462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 10855327 - 10855458
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || ||| | ||||||| | | ||| |||||||| || |||||||| ||||||| | |    
T  10855327 aaccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtac 10855426  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||| | ||||||||| ||| |||||||||    
T  10855427 gcatgcctctacgcacgaaccgaattagtcgc 10855458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 15795635 - 15795500
Alignment:
Q  36 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccgg 135  Q
    |||| |||| |||||||||| ||||||  |||| ||| | |||||||||| ||||| |||||||| |||| || ||||||||| | ||||||||||| |     
T  15795635 tggcgatgagctccttccaaggacgtacccggggaataccgagttcgattcccaggggaacaacgcttggtcagtgcgcatgcctctacgcacgagctga 15795536  T
Q  136 attagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||||||||  | |  ||||| ||||||||||||||    
T  15795535 attagtcgcccaccaatggtgggtcgaaaaccggtg 15795500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 47749268 - 47749105
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||| ||| ||| |||||||||| ||||| || ||||||| ||||||| | || ||| | | |||||||| | ||| |||||||  ||||||| ||||    
T  47749268 aaccaaattgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattcctaggggaacaactcttggccagtgcg 47749169  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||| | ||||||||||||| |||||||||  | |||||||  |||| |||||| || |||||    
T  47749168 catgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaag 47749105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 51683118 - 51682987
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||| | || |||||||||||||||||| |||| ||| |   |||||||| ||| || |||||||| ||| ||| |||    
T  51683118 aaccaagttgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgc 51683019  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||| | | | |||||||||||||||||||    
T  51683018 gcatgcctctccacacgagccggattagtcgc 51682987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 3755513 - 3755643
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| |||  |||||||||||| || ||| || ||| ||||||| |||| ||| | || ||||||| ||||||| ||||||||||| ||| |||    
T  3755513 aaccaagttgcttggactccagtggcaaagagctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgc 3755612  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||  | |||||| |||||||||||||||    
T  3755613 gcatgtctctacgcatgagccggattagtcg 3755643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 10040500 - 10040622
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||||||||| || ||||||| || ||||||  |||| |||   | ||||||||  |||| |||||||| ||||||| ||||    
T  10040500 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcaggggaacaacgcttggccagtgcg 10040599  T
Q  114 catgcatttacgcacgagccgga 136  Q
    ||||| | |||||||||||||||    
T  10040600 catgcctctacgcacgagccgga 10040622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 39849015 - 39849145
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||| | ||| ||||||||||||| || |||||||||| |||||| || || |||   | |||||||| ||||  |||||||| ||||||| || |    
T  39849015 aaccaagtcgcttgggctccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattcccagaggaacaacgcttggccagtgtg 39849114  T
Q  114 catgcatttacgcacgagccggattagtcgc 144  Q
    ||||| | |||||| ||||||||||||||||    
T  39849115 catgcctctacgcatgagccggattagtcgc 39849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 7310867 - 7310703
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||||||| ||||| |||||||||| ||||||||||  |||||   | | ||| | | |||||||| |||| | |||||||  ||| ||  ||     
T  7310867 aaccaagttgattgggctccggtggcaatgagctccttccaagaacgtacctgaggaataccgggttcgattcccagtgggaacaacacttgcccggtgt 7310768  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||||||||||||||||||||  |||||||||| |||| |||||| || |||||    
T  7310767 gcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaag 7310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 3507617 - 3507534
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    |||||||  ||||||| ||||||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| ||||    
T  3507617 gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 42412938 - 42412807
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||| |||| ||| | | |||||||| || || | ||||||| ||||| | |||    
T  42412938 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgc 42412839  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
     ||||| | |||||| ||||||||||||||||    
T  42412838 ccatgcctctacgcatgagccggattagtcgc 42412807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 26207965 - 26207835
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || |||  |||| ||| | | |||||||| ||| || |||||||| ||| ||| ||     
T  26207965 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgt 26207866  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||||||||||||||    
T  26207865 gcatgcctctacgcatgagccggattagtcg 26207835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 35315899 - 35316065
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||  |||   | |||||||| ||| || |||||||  ||||||| |||    
T  35315899 aaccaagttgtttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgc 35315998  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    |||||| | |||||| |||| |||||||||||  |  ||||||| |||| |||||| || |||||||    
T  35315999 gcatgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaaagaa 35316065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 29135856 - 29135985
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||| ||| ||| ||||||||||||| || || ||||||| ||||||| |||| ||| | |  ||||||| ||||| | ||||||  ||||||| |||    
T  29135856 aaccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgc 29135955  T
Q  113 gcatgcatttacgcacgagccggattagtc 142  Q
    |||||| | |||||| ||||||||||||||    
T  29135956 gcatgcctctacgcatgagccggattagtc 29135985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 8164576 - 8164660
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||||||| ||||||||| |||||||||||| ||||||||||||  | ||||||||  ||| ||| ||| |||||||    
T  8164576 gaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaaatcggcgtgaaag 8164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 28242221 - 28242353
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||||||||| |||| || || |||||||||| ||||||| |||  ||| | | ||| |||| ||||||| ||||| ||||||||| |||    
T  28242221 aaccaagttgcttgagctccggtggtaaagagctccttccaatgacgtatccggagaataccgggttagattgccaggaggaacaatgtttggccagtgc 28242320  T
Q  113 gcatgcatttacgcacgagccggattagtcgca 145  Q
     ||||| | || ||| ||| |||||||||||||    
T  28242321 acatgcctctatgcatgaggcggattagtcgca 28242353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 41630676 - 41630512
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||| ||| || |||||||||  ||||||  ||| |||| | | |||| ||| ||| || |||||||| ||| ||| |||    
T  41630676 aaccaagttgtttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgc 41630577  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||| || ||||||||||||||||  | |||||||  |||| |||| ||||||||||    
T  41630576 gcatgcctctacacatgagccggattagtcgcccacctttggttggtcggaaactggtgtgaaag 41630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 49082772 - 49082884
Alignment:
Q  19 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatg 117  Q
    ||||| ||| ||||||||||||  || ||||||| || ||||||| |||| ||| | |||||||||| ||| ||||||||||| || |||| ||||||||    
T  49082772 agttgtttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatg 49082871  T
Q  118 catttacgcacga 130  Q
    ||| ||| |||||    
T  49082872 catctacacacga 49082884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 29762319 - 29762152
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || ||||||||| |||   | || |||||  |||| | ||||||  ||||||| |||    
T  29762319 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgc 29762220  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaag 180  Q
    |||||| | || ||| |||| ||||||||||   | | |||||| |||| ||||||||| ||||||||    
T  29762219 gcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagaag 29762152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 47164158 - 47164213
Alignment:
Q  122 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||||||||||||||||||  ||||||||||  ||| |||||||||||||||    
T  47164158 tacgcacgagccggattagtcgctcatctttggtggatcggaaaccggtgtgaaag 47164213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 25294903 - 25295033
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||| ||  ||  ||||||  ||||||| |||    
T  25294903 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgc 25295002  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | || ||| |||||||||||||||    
T  25295003 gcatgcctctatgcatgagccggattagtcg 25295033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 50682420 - 50682522
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| |||||||| ||||||||  | ||||||| || ||||||||||| ||||   | |||||||||| | ||||||||||| ||||||| |||    
T  50682420 aaccaagttgtttgagctctagtggcaagaagctccttcgaatgacgtattcggaaaatatagggttcgatttctagggagaacaacgcttggccagtgc 50682519  T
Q  113 gca 115  Q
    |||    
T  50682520 gca 50682522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 30767347 - 30767258
Alignment:
Q  78 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaac 166  Q
    |||||||||||||| | ||||||  ||||||| || |||||| | |||||||||||||||||||||||  | |||||||| |||| ||||    
T  30767347 gttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 30767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 41219537 - 41219661
Alignment:
Q  15 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcg 113  Q
    ||||||||| ||| ||||| || ||||||| ||||||| || ||||||| |||||| | |  |||||||||  |||||| ||||||||||||||| ||||    
T  41219537 accaagttgcttgggctcccgttgcaatgagctccttctaaggacgtatacgggaa-taccaagttcgattctcaggaggaacaacgtttggccagtgcg 41219635  T
Q  114 catgcatttacgcacgagccggatta 139  Q
     |||| | | ||||||||| ||||||    
T  41219636 tatgcctctgcgcacgagctggatta 41219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 26043819 - 26043911
Alignment:
Q  78 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccgg 169  Q
    |||||||| ||||| ||||||||  ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||  |||||||    
T  26043819 gttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccgg 26043911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 43330799 - 43330739
Alignment:
Q  110 tgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 170  Q
    ||||||||| | |||||||||||||||||||||||  | |||||||| ||| |||||||||    
T  43330799 tgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggt 43330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 7648763 - 7648814
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||||||||| ||| ||||||| | | |||||||||||||||||||||||    
T  7648763 gaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgc 7648814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 36043729 - 36043674
Alignment:
Q  122 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  36043729 tacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 36043674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 22405703 - 22405553
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 116  Q
    |||||| ||| ||||||||||||| || ||||| |||| ||||||| || ||||| | |  ||| |||  |||||| ||||||| ||  ||| |||| ||    
T  22405703 aagttgtttgggctccagtggcaaggagctcctaccaatgacgtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaat 22405604  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 167  Q
    || |||| ||||||||||||||| |||   |||||||||| |||| |||||    
T  22405603 gcctttatgcacgagccggattaatcgtccatctttggtgcgtcggaaacc 22405553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 34460597 - 34460547
Alignment:
Q  90 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattag 140  Q
    ||||||||||||||||||| || |||||| |  ||||||||||||||||||    
T  34460597 ggagaacaacgtttggccagtgtgcatgcctccacgcacgagccggattag 34460547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 35923707 - 35923629
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||||||||||||||| ||||||||| | || ||||||| || ||||||||   ||||||| ||  |||||||||||||    
T  35923707 gaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatctttgatggatcgaaaaccggtg 35923629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 49198294 - 49198424
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||| ||| ||  | ||||||| ||| ||| |||| ||| | | |||||||| | ||| | ||||||  ||||||| |||    
T  49198294 aaccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgc 49198393  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||||||||||||||    
T  49198394 gcatgcctctacgcatgagccggattagtcg 49198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 52364932 - 52364838
Alignment:
Q  46 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggatta 139  Q
    |||||||||| ||||||  |||| ||| | |||||||||| |||| || ||||||| ||| ||| ||||||||| | ||||||||||| ||||||    
T  52364932 ctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggatta 52364838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 15085030 - 15084945
Alignment:
Q  92 agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||| ||||||| || |||| | | |||| ||||||  |||||||||  |||||||||||  ||| |||||||||||||||    
T  15085030 agaacaacggttggccagtgtgcatacctctacgtacgagctagattagtcgtctatctttggtggatcggaaaccggtgtgaaag 15084945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 47219106 - 47219251
Alignment:
Q  33 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgag 131  Q
    |||||| ||||| ||| |||||| ||||||| |||| ||| |   |||||||| ||| | ||| ||||| ||||| | ||||||||| | |||||| |||    
T  47219106 cagtggtaatgagctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgag 47219205  T
Q  132 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||||||   | ||||| || |||| ||||||||| |||||    
T  47219206 ccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 50405686 - 50405609
Alignment:
Q  94 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    ||||||| ||| ||| ||||||||| | |||||||||| ||||||||||||  | | |||||| |||| |||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtg 50405609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 4638161 - 4638225
Alignment:
Q  78 gttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagt 141  Q
    |||||||| ||||||||| ||||| ||| ||| ||||||| | | ||||||||||||||||||||    
T  4638161 gttcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagt 4638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 7650234 - 7650334
Alignment:
Q  78 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    |||||||||||||| | ||||||  ||||||| | || |||  | |||||||||||||||||||||||  | |||||||| || | ||||||||| ||||    
T  7650234 gttcgatttccagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaa 7650333  T
Q  177 g 177  Q
    |    
T  7650334 g 7650334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 48341963 - 48342011
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 62  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||    
T  48341963 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 48342011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 52011132 - 52011084
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 62  Q
    |||||||||| |||| || ||||||||| ||||||||||||| ||||||    
T  52011132 aaccaagttgtttgaacttcagtggcaaggaactccttccaaggacgta 52011084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 7747217 - 7747381
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| | ||||| ||||||||||||||| ||     
T  7747217 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgt 7747316  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  7747317 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 7747381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 22593078 - 22593207
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| |||||||||||| ||| || |||||||| ||||||| |||    
T  22593078 aaccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgc 22593176  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||||||||||||||    
T  22593177 gcatgcctctacgcatgagccggattagtcg 22593207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 10026779 - 10026615
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||| |||||| || |||||||||| |||||| |||| |||| | | ||||||||  |||| | ||||||||||||||| |||    
T  10026779 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgc 10026680  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||  |||||||||    
T  10026679 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaag 10026615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 18902693 - 18902529
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||| ||||| ||| | | |||||||| ||| || |||||||| ||| ||| |||    
T  18902693 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgc 18902594  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    || ||  | |||||||||||| ||||||||||  | |||||||| |||| ||||||||| |||||    
T  18902593 gcgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 38005345 - 38005509
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| ||| |||||||| || ||| |||||||| ||||||| |||    
T  38005345 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgc 38005444  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||| || ||||||||||||||||  | ||||||||  ||| |||| |||| |||||    
T  38005445 gcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaag 38005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 21286390 - 21286545
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 115  Q
    ||||||| ||||||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||||| | ||||||| ||| ||| ||||||    
T  21286390 caagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgca 21286489  T
Q  116 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    ||| | ||||||||||| ||||||||| |  ||| |||||| || | |||||||||    
T  21286490 tgcctctacgcacgagctggattagtcactcatcattggtgggttggaaaccggtg 21286545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 29653571 - 29653701
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||||||||| ||||||| |||||| || |||||| | |  ||||||||||| ||| ||||||| |||| || |||    
T  29653571 aaccaagttgtttg-gctccagtggcaatgaacttcttccaaggacgtactccggaaataccggattcgatttccagggaaaacaacgcttgggcagtgc 29653669  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||| | ||||||||||||| |||||||||    
T  29653670 gcatgcctctacgcacgagccgaattagtcgc 29653701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 7787003 - 7787157
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 116  Q
    |||||| ||| ||||||||||||| ||||||||| | | ||||||  |||| ||| | | |||||||||||||| | |||||   ||||||| | |||||    
T  7787003 aagttggttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcat 7787102  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    || | |||||||||||||||||||||||  ||||||||||  |||||||||||||    
T  7787103 gcctctacgcacgagccggattagtcgcccatctttggtggatcgaaaaccggtg 7787157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 13026574 - 13026445
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||| | || |||   | ||||||||  ||||| |||||| | ||||||| |||    
T  13026574 aaccaagttgattgaactccagtggcaaggaactccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgc 13026475  T
Q  113 gcatgcatttacgcacgagccggattagtc 142  Q
    |||||| | |||||| ||||||||||||||    
T  13026474 gcatgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 45263827 - 45263678
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgca 115  Q
    ||||||| ||| ||||||||||||| || |||||| |||| |  ||| |||| ||| | | |||||||| |||| | |||||||| ||||||| ||||||    
T  45263827 caagttgtttgggctccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgca 45263728  T
Q  116 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaa 165  Q
    ||| | |||||||||||||||||| ||||  |||||||||| ||||||||    
T  45263727 tgcctctacgcacgagccggattaatcgctcatctttggtgggtcgaaaa 45263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 331444 - 331608
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||||||||||||| ||| |||||| ||||||  |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  331444 aaccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 331543  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| || | ||||| || ||||||    
T  331544 gcatgcttctacgcatgagccggattagtcgcccacctttggtgggttggaaaccagtatgaaag 331608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 25540551 - 25540403
Alignment:
Q  30 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 128  Q
    |||||||||||| || ||| |||||| |||||||  ||| ||| ||| |||||||| | ||| | ||||||| ||||||| ||||||||| | |||||||    
T  25540551 ctccagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcac 25540452  T
Q  129 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  25540451 gagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 25540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 42770814 - 42770659
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| || ||||| | | |||| |||  |||| | ||||||| ||||||| |||    
T  42770814 aaccaagttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgc 42770715  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 168  Q
    |||||| | | |||||||||||||||| |||   | |||||||| |||||||||||    
T  42770714 gcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaaccg 42770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 44945537 - 44945700
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| |||| |||||||| || |||||||||| |||||| ||||  ||| ||| ||| |||| ||||  |||||||| ||||  | ||||    
T  44945537 aaccaagttgcttgggctcaagtggcaaggagctccttccaaggacgtactcggagaatactgggtttgattcccagaggaacaacgcttggatagtgcg 44945636  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||| | |||||||||||||||||||||||  | |||| |||  ||| ||||||||| |||||    
T  44945637 catgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 44945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 2550811 - 2550977
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||| ||| ||||||| |||| |||   | |||||||| |||||| |||||||  || |||| |||    
T  2550811 aaccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgc 2550910  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    |||||  | |||||| ||||||||||||||||  |  ||||||| || ||||||||||| |||||||    
T  2550911 gcatgtctctacgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaagaa 2550977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 29422158 - 29422288
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||||| |||| || |||||| ||| ||||||  |||| ||| ||| ||||||||||||| | |||||||  ||||||| ||     
T  29422158 aaccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatga 29422257  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||| | ||||||||||||||||||||||||    
T  29422258 gcatacctttacgcacgagccggattagtcg 29422288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 6358316 - 6358148
Alignment:
Q  12 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 110  Q
    |||||| ||||| ||| |||||||||||||  | ||| ||| || ||||||| |||| ||| |    ||||||||||||| | ||||||  ||||||| |    
T  6358316 tgaaccgagttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagt 6358217  T
Q  111 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    |||||||| | |||||| |||||||||||||||   | | |||||| ||||||||||||||||||||||    
T  6358216 gcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaagaa 6358148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 8410074 - 8410238
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||  |||   | |||||||| ||||| | ||||||  ||||||| |||    
T  8410074 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgc 8410173  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||||||||||||||||||||  |  ||||| | |||| ||||||||| |||||    
T  8410174 gcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaag 8410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 10823035 - 10823167
Alignment:
Q  46 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||||||| ||||||  |||| ||| | | ||| |||| ||||||| ||||||| ||||||| ||||||||| | |||||||||||||||||||||||    
T  10823035 ctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgc 10823134  T
Q  145 atatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
      | |||| ||| |||| ||||||||| |||||    
T  10823135 ccaccttttgtgggtcggaaaccggtgcgaaag 10823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 41220595 - 41220742
Alignment:
Q  31 tccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacg 129  Q
    ||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||||| |||||||| ||||||| ||||||||| | |||||| |    
T  41220595 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 41220694  T
Q  130 agccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||| ||||||||   | |||| ||| |||| ||||||||| |||||    
T  41220695 agccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 35946725 - 35946811
Alignment:
Q  57 gacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 143  Q
    ||||||| |||| ||| | |||||||||| | ||| |||||||| |||||||||| |||||| | ||||||||||||||||||||||    
T  35946725 gacgtatccggggaataccgagttcgattcctaggggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcg 35946811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 39201671 - 39201513
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||||||| |||  |||||||| || |||||||||| |||||| ||| | ||| | || |||||||  |||| | ||||| ||||||||| ||     
T  39201671 aaccaagttgattgggctatagtggcaaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgt 39201572  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| |||||||||    
T  39201571 gcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 177
Target Start/End: Original strand, 44139425 - 44139591
Alignment:
Q  12 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 110  Q
    |||||||||||| ||| ||||||||||  | ||||||||||||| || | ||  ||| ||| | | |||||||| ||||| | ||||||| ||||||| |    
T  44139425 tgaaccaagttgcttgggctccagtggtgaggaactccttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagt 44139524  T
Q  111 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||| ||| | |||||||||||||||||||||||  | |  ||||| |||| ||||||||| |||||    
T  44139525 gcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaag 44139591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 37560119 - 37560280
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgca 115  Q
    ||||||| ||| |||||||||| ||  | |||||||||| ||||||  || | ||| |   |||||||| || ||| ||||||||||||| || ||||||    
T  37560119 caagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgca 37560218  T
Q  116 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||| | |||||||||||||||||| |||   | ||||| || ||||||||||||||||||||    
T  37560219 tgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaag 37560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 12455317 - 12455417
Alignment:
Q  78 gttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    |||||||||||||| ||| ||||| || |||| ||||||||| | |||||||||||||||||||||||  | | |||||| |||| ||||||||| ||||    
T  12455317 gttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaa 12455416  T
Q  177 g 177  Q
    |    
T  12455417 g 12455417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 12864167 - 12864331
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||| ||| || |||||||||| |||||||||||| ||| | |  ||||||||||| || |||||||  |||| || |||    
T  12864167 aaccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgc 12864266  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | | |||| ||||| |||||||||   | | |||||| |||| ||||||||| |||||    
T  12864267 gcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 180
Target Start/End: Original strand, 38962705 - 38962873
Alignment:
Q  13 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 111  Q
    ||||||||||| |||  ||||||||| || || ||| || ||| ||||||| |||| ||| | | ||||||||| |||||| ||||||| ||||||| ||    
T  38962705 gaaccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtg 38962804  T
Q  112 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaag 180  Q
    ||||||| | |||||| || ||||||||||||   | |||||||| |||  |||| |||| ||||||||    
T  38962805 cgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaagaag 38962873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 21180477 - 21180346
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  ||   ||| | |  ||||||| ||| ||||||||||  ||||||| |||    
T  21180477 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgc 21180378  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
     ||||| | |||||||||||||||||||||||    
T  21180377 acatgcctctacgcacgagccggattagtcgc 21180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 9360830 - 9360745
Alignment:
Q  94 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    ||||||||||||||| ||||||||| | ||||||||||||| |||||||||  | |||| ||| | || ||||||||| |||||||    
T  9360830 aacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaagaa 9360745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 24179576 - 24179669
Alignment:
Q  78 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    ||||||||  |||| |||||||||||||||| ||| ||||| | |||||| |||||||||||||||   |||||||||| ||  ||||||||||    
T  24179576 gttcgattctcaggggaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtg 24179669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 2528504 - 2528340
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||| ||| ||| |||||||||||||||| |||||||||| |||||| ||| | ||  | | |||||||| ||| || |||||||| |||| || ||     
T  2528504 aaccaaattgtttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgt 2528405  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||| ||  |||||||||||||||  |||||| ||| |||| |||| |||| |||||    
T  2528404 gcatgcctctacacataagccggattagtcgctcatctttagtgagtcggaaactggtgcgaaag 2528340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 14169772 - 14169608
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||| ||| ||  || |||||| |||||||||||| |||   | |||||||| ||| || |||||||  ||| ||| |||    
T  14169772 aaccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgc 14169673  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||  | |||||| |||||||||||||||  || | |||||| |||| ||||||||| |||||    
T  14169672 gcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 15079426 - 15079557
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||| ||||||| |||| |||||||| ||||||  |||| ||| | | |||||||||||| || |||||||| ||| ||| ||     
T  15079426 aaccaagttgcttgggctccggtggcaaggaacaccttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgt 15079525  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||  | ||||||||||||  |||||||||    
T  15079526 gcatgactctacgcacgagccaaattagtcgc 15079557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 16034899 - 16035046
Alignment:
Q  33 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgag 131  Q
    |||||| || ||||||||||||| ||||||| || | ||| | | ||||||||| |||| | ||||||| ||| ||| || |||||| | |||| |||||    
T  16034899 cagtggtaaggaactccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgag 16034998  T
Q  132 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    |||||||||||||  | | ||| || |||| ||||||||| |||||||    
T  16034999 ccggattagtcgctcaccattgatgagtcggaaaccggtgcgaaagaa 16035046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 25549686 - 25549801
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgca 127  Q
    ||||||||||||| || ||||||||||  ||||||| ||| ||| ||| ||||||||   ||| | |||||| |||||| | ||| ||||| | ||||||    
T  25549686 gctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctctacgca 25549785  T
Q  128 cgagccggattagtcg 143  Q
    ||||||||||||||||    
T  25549786 cgagccggattagtcg 25549801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 20612699 - 20612534
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga--gaacaacgtttggccattg 111  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |  ||||||||| ||| | | ||||||||  |||||  |||||||  ||||||| ||    
T  20612699 aaccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtg 20612600  T
Q  112 cgcatgcatttacgcacgagcc-ggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    ||||||| | || ||| ||||| ||||||||||   | | |||||| |||| ||||||||| ||||    
T  20612599 cgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 34130400 - 34130335
Alignment:
Q  78 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 143  Q
    ||||||||| ||||||||||||||||| ||||||| ||||  | |||||| ||||| |||||||||    
T  34130400 gttcgattttcaggagaacaacgtttgaccattgcacatgtctctacgcatgagccagattagtcg 34130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 27725963 - 27726047
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||||||| ||||||||| | ||||||| |||||||||||||||  | |  ||||| |||| |||||||||||||||    
T  27725963 gaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtgtgaaag 27726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 41032068 - 41031905
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||| ||| ||| ||||||||||||| || |||||||||| ||||||   |||||   | | |||||||| ||||| | ||||||  ||||||| ||     
T  41032068 aaccaaattgcttgggctccagtggcaaggagctccttccaaggacgtaccagggaacaccgg-gttcgattcccagggggaacaacacttggccagtgt 41031970  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | ||||||||||||||||||||| |  | |||||||| |||| ||||| ||| |||||    
T  41031969 gcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaag 41031905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 10046639 - 10046477
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||| |||||| || ||||||||||  |||||| |||  ||| | | |||||||| || |||  ||||||||||| | | |||    
T  10046639 aaccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttgac-agtgc 10046541  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||  ||||||||    
T  10046540 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaa 10046477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 20963268 - 20963198
Alignment:
Q  18 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca 89  Q
    |||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | ||||||||||||||    
T  20963268 aagttgtttgggctccagtggcaaggacctccttccaatgacgtatccggggaatac-gagttcgatttcca 20963198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 29697467 - 29697558
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcggga-aatgctgagttcgatttccaggagaacaacgtttg 104  Q
    ||||||| || ||| ||||||||||||| |||||||||||||  |||||  ||| | ||| ||||||| |||| ||||| ||||||||||||    
T  29697467 aaccaaggtgtttgggctccagtggcaaggaactccttccaataacgtacacggaagaatactgagtttgattcccaggggaacaacgtttg 29697558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 40969083 - 40968964
Alignment:
Q  9 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggcc 107  Q
    ||||||||||||||| ||| |||| |||||||||||  || |||||| |||||  || || ||| | | |||||||||||| ||| |||||||||||| |    
T  40969083 atatgaaccaagttgcttgggctctagtggcaatgagttcattccaaggacgttctcagggaataccgggttcgatttccagggaaaacaacgtttggtc 40968984  T
Q  108 attgcgcatgcatttacgca 127  Q
    | |||| |||| | ||||||    
T  40968983 agtgcgaatgcctctacgca 40968964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 177
Target Start/End: Complemental strand, 3811856 - 3811690
Alignment:
Q  12 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccatt 110  Q
    |||||||||||| |||  || || |||||| ||||||||||||| |||||| ||| | |||   | |||||||| |||| | |||||||  |||| || |    
T  3811856 tgaaccaagttgtttggtcttcaatggcaaggaactccttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaat 3811757  T
Q  111 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| | |||||| ||||||||||| ||||  | |||||||| |||  |||||| || |||||    
T  3811756 gcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaag 3811690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 16813312 - 16813198
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 128  Q
    |||||| || ||| || |||||||||| |||||| ||||  ||| |  ||||| | || |||| |||||||||||| ||| | ||||||| | || ||||    
T  16813312 gctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcaggggaacaacgtttgaccagtacgcatgcctctatgcac 16813213  T
Q  129 gagccggattagtcg 143  Q
    |||||||||||||||    
T  16813212 gagccggattagtcg 16813198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 16852591 - 16852477
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 128  Q
    |||||| || ||| || |||||||||| |||||| ||||  ||| |  ||||| | || |||| |||||||||||| ||| | ||||||| | || ||||    
T  16852591 gctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcaggggaacaacgtttgaccagtacgcatgcctctatgcac 16852492  T
Q  129 gagccggattagtcg 143  Q
    |||||||||||||||    
T  16852491 gagccggattagtcg 16852477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 28525554 - 28525489
Alignment:
Q  79 ttcgatttccaggag--aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtc 142  Q
    ||||||||||||| |  ||||||  ||||||| ||||||||| | |||||||||||||||||||||    
T  28525554 ttcgatttccagggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 28525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 34356149 - 34356275
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || ||  |||||| |||||||  ||| ||| | | |||||||||||| || |||||||  |||| || |||    
T  34356149 aaccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgc 34356248  T
Q  113 gcatgcatttacgcacgagccggatta 139  Q
    |||||| | || ||| |||||||||||    
T  34356249 gcatgcctctatgcatgagccggatta 34356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 39807033 - 39806919
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgca 127  Q
    |||||||||||||    |||||| ||| ||||||  |||| ||| | | |||||||| ||| ||||| ||||||||||||| ||||||||| | ||| ||    
T  39807033 gctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacaca 39806934  T
Q  128 cgagccggattagtc 142  Q
    |||| ||||||||||    
T  39806933 cgagtcggattagtc 39806919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 10669612 - 10669693
Alignment:
Q  90 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    ||||||||||| ||||||| ||||||||  | |||||||||| ||||||| |||   | |||||||| |||| |||||||||    
T  10669612 ggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggtg 10669693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 23500844 - 23500795
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 63  Q
    |||||||||| ||| ||||| ||||||| || ||||||||||||||||||    
T  23500844 aaccaagttgtttgggctccggtggcaaggagctccttccaaagacgtat 23500795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 26805306 - 26805394
Alignment:
Q  81 cgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 168  Q
    |||||| |||||||| | ||||||||||| ||| ||||| | |||||| ||| ||||||||||||  | ||||||||  ||||||||||    
T  26805306 cgattttcaggagaaacgacgtttggccagtgcacatgcctctacgcatgagtcggattagtcgcccacctttggtggctcgaaaaccg 26805394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 9168414 - 9168286
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||| |||| ||| | |||  ||||| ||||  |||||||| ||||||| ||||    
T  9168414 aaccaagttgcttgagctccagtggcaagga-ctccttccaaagacgtatccggggaataccgagaacgattcccagaggaacaacgcttggccagtgcg 9168316  T
Q  114 catgcatttacgcacgagccggattagtcg 143  Q
    ||| | | |||||| |||||||||||||||    
T  9168315 catacctctacgcatgagccggattagtcg 9168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 38897881 - 38897754
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| |||| ||| |||||||| || ||| || ||| |||||||  ||| ||| | | |||||||||||||| |||||||| ||||||| ||||    
T  38897881 aaccaagttgcttgaactcaagtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatttccaggggaacaacgcttggccagtgcg 38897782  T
Q  114 catgcatttacgcacgagccggattagt 141  Q
    ||||| | ||||||||||||||||||||    
T  38897781 catgcctctacgcacgagccggattagt 38897754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 1538375 - 1538539
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||| | |||||||||||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  1538375 aaccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1538474  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| ||||||||||| |||   | | |||||| |||| ||||||||| |||||    
T  1538475 gcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaag 1538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 5732083 - 5731919
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  5732083 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5731984  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||| | ||||| |||||||||   | |||| ||| |||| ||||||||| |||||    
T  5731983 gcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 19572667 - 19572798
Alignment:
Q  13 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattg 111  Q
    ||||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||| ||| || |||||||  ||||||| ||    
T  19572667 gaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtg 19572766  T
Q  112 cgcatgcatttacgcacgagccggattagtcg 143  Q
    ||||||| | |||||| |||||||||||||||    
T  19572767 cgcatgcctctacgcatgagccggattagtcg 19572798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 25417331 - 25417180
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgca 127  Q
    ||||||||||||| || |||||||||| |||||| ||||| ||| | | |||||||| ||||| | ||||||| ||||||| ||||||||| | |||| |    
T  25417331 gctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaa 25417232  T
Q  128 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    |||||||||||||||   || | |||||| |||  ||||||||| |||||||    
T  25417231 cgagccggattagtcatttaccattggtgggtcagaaaccggtgcgaaagaa 25417180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 37263185 - 37263314
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||||||||| ||  |||||| || ||||||  |||| |||   | ||||||||  |||| |||||||| ||||||| ||||    
T  37263185 aaccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcaggggaacaacgcttggccaatgcg 37263284  T
Q  114 catgcatttacgcacgagccggattagtcg 143  Q
    ||||| | ||||||||||||||||||||||    
T  37263285 catgcctctacgcacgagccggattagtcg 37263314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 41163622 - 41163493
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||||||||| || ||||||||||  |||||  |||| ||| | | |||||||| ||||| |||||||||||||||| |||     
T  41163622 aaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccaggggaacaacgtttggccagtgca 41163523  T
Q  114 catgcatttacgcacgagccggattagtcg 143  Q
    ||||  | |||||| |||| ||||||||||    
T  41163522 catgtctctacgcatgagctggattagtcg 41163493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 9812816 - 9812980
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||||||| ||     
T  9812816 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 9812915  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  9812916 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 9812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 42086271 - 42086435
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||| ||||||| || |||||||||| ||||||  || | ||| | | |||||||| ||||| | ||||||| ||| ||| |||    
T  42086271 aaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgc 42086370  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  42086371 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 12081885 - 12082016
Alignment:
Q  47 tccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 145  Q
    |||||| || ||||||| |||| ||| ||| ||||||||  |||| | ||||||| ||||||| ||||||||||| ||||||||||||| ||||||||      
T  12081885 tccttcaaaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtc 12081984  T
Q  146 tatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     | |||||||| |||| ||| |||||||||||    
T  12081985 cacctttggtgagtcggaaatcggtgtgaaag 12082016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 3654075 - 3653919
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| ||||||||| |||||| ||| |||||| ||||||  |||  ||| | | |||||||| | || ||||||||| ||| ||| ||||    
T  3654075 aaccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcgattcctag-agaacaacgcttgaccagtgcg 3653977  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    ||||| | |||||||||| |||||||||||   | ||||||||  |||||||||||||    
T  3653976 catgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtg 3653919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 5079275 - 5079438
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| | ||| ||||||| || ||||||||||  |||||| || | ||| | | | | |||||||||| | |||| || |||| || |||    
T  5079275 aaccaagttgtttgggttccggtggcaaagagctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgc 5079374  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||||||||||||||||||||  | |||||||| |||||||||||||| |||||    
T  5079375 gcatgcttctacgcacgagccggattagtcgcccacctttggtg-gtcgaaaaccggtgcgaaag 5079438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 12704958 - 12705122
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 112  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | |||| |||||||| ||| ||| ||     
T  12704958 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 12705057  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  12705058 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 26077085 - 26077225
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||||||| || || ||| |||||| |||||||| ||| ||| ||  |||||||| |||| | |||||||| ||||||| |||    
T  26077085 aaccaagttgtttgggctccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattcccagagggaacaacgcttggccagtgc 26077184  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttg 153  Q
     ||||| | |||||||||||| ||||| ||||  |||||||    
T  26077185 acatgcctctacgcacgagccagattaatcgctcatctttg 26077225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 7866525 - 7866656
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  || | ||| | | |||||||| | ||||| ||||||| ||||||| ||     
T  7866525 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 7866624  T
Q  113 gcatgcatttacgcacgagccggattagtcgc 144  Q
    |||||| | ||||||||| |||||||||||||    
T  7866625 gcatgcctctacgcacgaaccggattagtcgc 7866656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 40117400 - 40117523
Alignment:
Q  55 aagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttg 153  Q
    |||||||||||||| |||   || ||||||||||||| | ||||||| ||||||| ||||||||| | |||||| ||||||||||| |||   | |||||    
T  40117400 aagacgtattcggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttg 40117499  T
Q  154 gtgtgtcgaaaaccggtgtgaaag 177  Q
    |||  ||||||||||||| |||||    
T  40117500 gtggatcgaaaaccggtgcgaaag 40117523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 6764539 - 6764462
Alignment:
Q  94 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    ||||| ||||||| | ||||||||| | ||||||||||||||||||||||| |||||||| || |||| |||| ||||    
T  6764539 aacaatgtttggctagtgcgcatgcctctacgcacgagccggattagtcgcctatctttgttgggtcggaaactggtg 6764462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 8513462 - 8513627
Alignment:
Q  13 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattg 111  Q
    ||||||||||| |||  ||| |||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||| ||| ||| | ||||||| ||    
T  8513462 gaaccaagttgcttggactcaagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtg 8513561  T
Q  112 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    | ||||| | |||||||||||| |||||||||   | |||||||| |||| ||||||||| |||||    
T  8513562 cacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 8513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 16755005 - 16755109
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||  ||| ||| ||||||||| || ||| |||||||||||||| |||| ||| ||| ||||||||| |||||| ||||||  ||||||| |||    
T  16755005 aaccaagttccttgggcttcagtggcaaggagctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgc 16755104  T
Q  113 gcatg 117  Q
    |||||    
T  16755105 gcatg 16755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 28862779 - 28862823
Alignment:
Q  24 attgagctccagtggcaatgaactccttccaaagacgtattcggg 68  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  28862779 attgagctccagtggcaaggagctccttccaaagacgtattcggg 28862823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 18327730 - 18327789
Alignment:
Q  30 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca 89  Q
    |||||||||||| || |||||||||| ||||||||| |||||| ||| ||||||||||||    
T  18327730 ctccagtggcaaggagctccttccaaggacgtattcaggaaatactgggttcgatttcca 18327789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 20682781 - 20682654
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactcc-ttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 111  Q
    |||||||||| ||| ||||||||| ||| || |||| ||| || ||||||  |||| |||  || ||| |||||||||| | ||||||| ||||||| ||    
T  20682781 aaccaagttgcttgggctccagtgacaaggagctccattctaaggacgtacccggggaatattgggttagatttccagggggaacaacgcttggccagtg 20682682  T
Q  112 cgcatgcatttacgcacgagccggatta 139  Q
    ||||||| | ||||||||||||||||||    
T  20682681 cgcatgcctctacgcacgagccggatta 20682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 24463978 - 24463891
Alignment:
Q  84 tttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||| ||| |||||||| ||||||| ||||||||| | || ||||||||||||||||||||  | ||||  || ||||||||||||||    
T  24463978 tttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccacctttactgggtcgaaaaccggtg 24463891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 11845944 - 11845798
Alignment:
Q  34 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagc 132  Q
    |||||||| || |||||||||| ||||||  || |||||   | |||||||||| ||| | ||||||||||||||| ||||||||| | |||| | ||||    
T  11845944 agtggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagc 11845845  T
Q  133 cggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    || |||| ||||  | ||||| || || | |||||||||||||||||    
T  11845844 cgaattaatcgcccacctttgatgggttggaaaccggtgtgaaagaa 11845798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 14588716 - 14588614
Alignment:
Q  78 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    ||||||||| |||||| || |||| ||| ||| ||||||||| | |||||| |||||||||||||||   | |||||||| | |||||||||||| ||||    
T  14588716 gttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaa 14588617  T
Q  177 gaa 179  Q
    |||    
T  14588616 gaa 14588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 18136443 - 18136317
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||| |||  ||| | | |||||||| ||| || |||||||  |||| || ||     
T  18136443 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgt 18136344  T
Q  113 gcatgcatttacgcacgagccggatta 139  Q
    |||||| | ||| || |||||||||||    
T  18136343 gcatgcctctacacatgagccggatta 18136317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 20525782 - 20525912
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||| ||| || |||| |||| |||   | |||||||| |||||  |||||||  || |||| |||    
T  20525782 aaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgc 20525881  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | |||||| |||||||||||||||    
T  20525882 gcatgcctctacgcatgagccggattagtcg 20525912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 28857072 - 28857194
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||| |  |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  28857072 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 28857171  T
Q  113 gcatgcatttacgcacgagccgg 135  Q
    |||||| | |||||| |||||||    
T  28857172 gcatgcctctacgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 35403675 - 35403558
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 112  Q
    |||||| ||| ||| ||||||||||||| || |||||||||| |||||| ||||||||| | | |||||||| |   || |||||||| ||||||| |||    
T  35403675 aaccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgc 35403576  T
Q  113 gcatgcatttacgcacga 130  Q
    |||||  | |||||||||    
T  35403575 gcatgtctctacgcacga 35403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 9805028 - 9805112
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||||||| ||||||||| | |||||| |||||||||||||||   | |||||||| |||| |||| |||| |||||    
T  9805028 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 35561986 - 35561850
Alignment:
Q  9 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggcc 107  Q
    |||| |||||||||| |||  |||||||||||| || |||||||||| ||||||| |||| |||   |||||||| |||||| | |||||||   || ||    
T  35561986 atattaaccaagttgcttggactccagtggcaaagagctccttccaatgacgtatccggggaatatcgagttcgacttccagagggaacaacacctgacc 35561887  T
Q  108 attgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    | ||||||||| | ||| || ||||| ||||||||||    
T  35561886 agtgcgcatgcctctacacatgagccagattagtcgc 35561850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 41801001 - 41801085
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||| ||| ||||||||  | ||||||||||||||||||||||   ||||||| || |||| ||| |||||||||||    
T  41801001 gaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttgatgggtcggaaagcggtgtgaaag 41801085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 2485141 - 2485304
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| |||  ||||| |||||| || ||| |||||| ||||||||| || ||| ||| |||||||| | ||| |||||||  | ||||  ||||    
T  2485141 aaccaagttgtttggactccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcgattcctaggggaacaaccctgggcctgtgcg 2485240  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||| | |||| | ||| ||||||||||||  | ||||| || |||| |||||| || |||||    
T  2485241 catgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaag 2485304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 21487623 - 21487721
Alignment:
Q  76 gagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtga 174  Q
    ||||||||||| |||||| ||||||||||||| | ||||||||| | |   |||||||||||||||||||  | ||||  || |||||||||||||| ||    
T  21487623 gagttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccacctttaatgggtcgaaaaccggtgcga 21487719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 30995145 - 30995208
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtg 156  Q
    |||||||  |||||||  |||||||| | |||||||||||||||||||||||  ||||||||||    
T  30995145 gaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatctttggtg 30995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 1826801 - 1826855
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcggg 68  Q
    |||||||||| ||| ||| |||| ||||||| ||||||||||||||||| |||||    
T  1826801 aaccaagttgtttgggcttcagtagcaatgagctccttccaaagacgtactcggg 1826855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 30349523 - 30349653
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| ||  ||||||||| ||||||| |||| ||| | | ||| |||||| | || |||||| | ||||||| |||    
T  30349523 aaccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgc 30349622  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | || ||| |||| | ||||||||    
T  30349623 gcatgcctctatgcatgagctgaattagtcg 30349653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 39099862 - 39099784
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||||||  ||||||| ||| ||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||||||    
T  39099862 gaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtg 39099784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 42291588 - 42291538
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 143  Q
    |||||||| ||||||| ||| ||||| | ||||||||||||||||||||||    
T  42291588 gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcg 42291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 18294646 - 18294493
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| |||  || ||||| ||| ||||||||||||| ||| || ||||  ||| | | |||| || |||||| |||||||| |||| || ||||    
T  18294646 aaccaagttgtttggacttcagtgacaaggaactccttccaaggacatactcggagaataccgggttcaatatccaggggaacaacgcttggtcagtgcg 18294547  T
Q  114 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 167  Q
    ||| | | ||| || || |||||||| ||||  |||||||||| |||| |||||    
T  18294546 catacctctacacatgaaccggattaatcgcccatctttggtgggtcggaaacc 18294493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 23383592 - 23383641
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 63  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  23383592 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtat 23383641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 24875366 - 24875415
Alignment:
Q  90 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggatta 139  Q
    ||||||||||||||| ||| ||||||||  | ||||||||||||||||||    
T  24875366 ggagaacaacgtttgaccagtgcgcatgtctctacgcacgagccggatta 24875415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 25452939 - 25453000
Alignment:
Q  83 atttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 144  Q
    |||| |||| |||||| ||||| ||| || |||||| | |||||||||||||||||||||||    
T  25452939 attttcaggggaacaatgtttgaccagtgtgcatgcctctacgcacgagccggattagtcgc 25453000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 35638167 - 35638066
Alignment:
Q  43 gaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 141  Q
    ||||||||||||  |||||||| ||| |||  ||| |||||||| |||||| |||||||||||| || || |||| | | |||||||||| | |||||||    
T  35638167 gaactccttccagggacgtatttggggaatattgaattcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgcacgagtcagattagt 35638068  T
Q  142 cg 143  Q
    ||    
T  35638067 cg 35638066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 6767214 - 6767166
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 62  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||    
T  6767214 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgta 6767166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 13664284 - 13664368
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||  ||||||| ||||||||| | |||||| ||||| ||||| |||   | ||||||||||||| ||||||||| |||||    
T  13664284 gaacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgatcacctttggtgtgtcggaaaccggtgcgaaag 13664368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 68463 - 68618
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| ||| |||| |||||||| || |||||||||| ||||||  ||||||||   | |||||||| ||||| | ||||||| ||||    |||    
T  68463 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttggg---tgc 68559  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 171  Q
    |||||| | |||||||||||||||||||||||  | |||||||| ||||||||||||||    
T  68560 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtg 68618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 40990 - 41147
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 112  Q
    |||||||||| ||| ||||||||||||| || |||||||||  |||||| || || |||   | |||||||| || ||| |||||||  |||| || ||     
T  40990 aaccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgt 41089  T
Q  113 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 170  Q
    |||||| | |||||||||||||||||||||||  |||||||||| |||| ||||||||    
T  41090 gcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggt 41147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 95136 - 95013
Alignment:
Q  20 gttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgca 119  Q
    |||| ||| |||||| |||||| || ||||||||||  | |||| |||| ||| |   |||||||||| |||| ||||||||||| ||| |||||||||     
T  95136 gttgcttgggctccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgatttctagga-aacaacgtttgaccagtgcgcatgcc 95038  T
Q  120 tttacgcacgagccggattagtcgc 144  Q
    |||||||| ||||||||||||||||    
T  95037 tttacgcatgagccggattagtcgc 95013  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 186467 - 186626
Alignment:
Q  17 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 116  Q
    ||||||| |||||||| |||||||| || | ||||| || || ||||| ||  |||   | ||||||||||  |||||| || |||||| || ||| |||    
T  186467 caagttggttgagctctagtggcaaggagcaccttctaaggatgtatttggagaatatcgggttcgatttcagggagaataatgtttggtcagtgcacat 186566  T
Q  117 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    || | ||||||||||||||||||||||   |||||| ||| |||| ||||||||||||||    
T  186567 gcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 224372 - 224427
Alignment:
Q  122 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||||||||||||||||   |||||||||| |||| ||||||||| |||||    
T  224372 tacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaag 224427  T

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Target: scaffold0209 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 12521 - 12650
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| |||| |||||||| || || ||||||| |||||| ||| ||||| | | |||||||| | ||| |||||||| ||| ||| ||||    
T  12521 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctagg-gaacaacgcttgaccagtgcg 12619  T
Q  114 catgcatttacgcacgagccggattagtcgc 144  Q
    ||||| | |||||| ||| ||||||||||||    
T  12620 catgcctctacgcatgagtcggattagtcgc 12650  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 26129 - 26259
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 112  Q
    |||||||||| |||  ||| ||||||||  ||||||||| || ||| ||   ||| ||| ||| |||||||||||||| | ||||||| ||||||| ||     
T  26129 aaccaagttgcttggactctagtggcaagaaactccttctaaggacatacctggggaatactgggttcgatttccagggggaacaacgcttggccagtgt 26228  T
Q  113 gcatgcatttacgcacgagccggattagtcg 143  Q
    |||||| | ||||||||||||||||||||||    
T  26229 gcatgcctctacgcacgagccggattagtcg 26259  T

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Target: scaffold0170 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 9856 - 9921
Alignment:
Q  79 ttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 143  Q
    ||||||||||||| | ||||||| ||||||| ||||||||| | ||||||||||||||||||||||    
T  9856 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcg 9921  T

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Target: scaffold0316 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 177
Target Start/End: Complemental strand, 1713 - 1613
Alignment:
Q  78 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 176  Q
    |||||||||||||| | ||||||| || |||| ||||||||| | |||||| |||||  |||||||||  | |||||||| |||||||||||||| ||||    
T  1713 gttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaaa 1614  T
Q  177 g 177  Q
    |    
T  1613 g 1613  T

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Target: scaffold0291 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 6881 - 6965
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||  ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  6881 gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 6965  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 155794 - 155710
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||||| | ||||||||| | |||||||||||||||||||||||  | |||||||| |||| || |||||| |||||    
T  155794 gaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaag 155710  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 25947 - 25843
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 112  Q
    |||||||||| ||| |||||||| |||| || ||||||||||  ||||| ||||| ||| |   |||||||| | ||| ||||||||| ||||||| |||    
T  25947 aaccaagttgtttgggctccagtagcaaagagctccttccaagtacgtactcggggaatacaaggttcgattcctagggagaacaacgcttggccagtgc 25848  T
Q  113 gcatg 117  Q
    |||||    
T  25847 gcatg 25843  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 250101 - 250022
Alignment:
Q  100 gtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 179  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    |||||||| |||| ||| ||||| |||||||    
T  250101 gtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaa 250022  T

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Target: scaffold0384 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 5919 - 6048
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 113  Q
    |||||||||| ||| | || |||||||| || |||||| ||| | ||||  |||| ||| ||| |||||||||||||| | |||||| ||||||| |||     
T  5919 aaccaagttgcttgggttctagtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatttccagggggacaacgcttggccagtgca 6018  T
Q  114 catgcatttacgcacgagccggattagtcg 143  Q
    ||||| | |||||| ||| || ||||||||    
T  6019 catgcctctacgcatgagacgaattagtcg 6048  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 319383 - 319532
Alignment:
Q  29 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgca 127  Q
    ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||||| | || |||||||| ||||||| ||||||| | | || |||    
T  319383 gctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgca 319482  T
Q  128 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
     |||| ||||||||||   | |||||||| | || ||||||||| |||||    
T  319483 tgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaag 319532  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 42918 - 42831
Alignment:
Q  90 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    ||||||||| | |||| || ||||||||| | ||| || ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  42918 ggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 42831  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 8873 - 8824
Alignment:
Q  14 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 63  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  8873 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtat 8824  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 12696 - 12780
Alignment:
Q  93 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 177  Q
    |||||||| ||||||| || |||||| | ||||||||| |||||||||||||  | ||||| || |||  ||||||||| |||||    
T  12696 gaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttgatgggtcagaaaccggtgcgaaag 12780  T

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