View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18587_high_15 (Length: 300)
Name: NF18587_high_15
Description: NF18587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18587_high_15 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 285; Significance: 1e-160; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14210693 - 14210977
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14210693 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14210792 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14210793 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14210892 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14210893 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14210977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14212613 - 14212897
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212613 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14212712 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212713 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14212812 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212813 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14212897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14214550 - 14214834
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214550 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14214649 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214650 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14214749 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214750 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14214834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14218391 - 14218675
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218391 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14218490 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218491 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14218590 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218591 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14218675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14219360 - 14219644
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219360 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14219459 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219460 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14219559 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219560 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14219644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14215519 - 14215803
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14215519 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14215618 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14215619 |
tattttacataagtggttttgaacgacgcaaaaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14215718 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14215719 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14215803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14222249 - 14222533
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14222249 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14222348 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14222349 |
tatcttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14222448 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14222449 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14222533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14234952 - 14235236
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14234952 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14235051 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14235052 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacctgttaaagagttcattgaa |
14235151 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14235152 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14235236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14213582 - 14213865
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14213582 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14213681 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14213682 |
tattttacataagtggttttgaacgacgcataa-cttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14213780 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14213781 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14213865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 14221280 - 14221564
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
14221280 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacacaacccaccttagtaatatgccgttcaaatctaccaacggattcaccaccatg |
14221379 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14221380 |
tatcttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14221479 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14221480 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
14221564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 14208791 - 14209047
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14208791 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14208890 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14208891 |
tattttacataagtggttttgaacgacgcaaaaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14208990 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14208991 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
14209047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 14209742 - 14209998
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209742 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14209841 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209842 |
tattttacataagtggttttgaacgacgcaaaaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14209941 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209942 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
14209998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 14211662 - 14211918
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211662 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14211761 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211762 |
tattttacataagtggttttgaacgacgcaaaaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14211861 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211862 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
14211918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 14216488 - 14216744
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14216488 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14216587 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14216588 |
tattttacataagtggttttgaacgacgcaaaaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14216687 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14216688 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
14216744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 14217439 - 14217695
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14217439 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14217538 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14217539 |
tattttacataagtggttttgaacgacgcaaaaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14217638 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14217639 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
14217695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 14220329 - 14220585
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14220329 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
14220428 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14220429 |
tattttacataagtggttttgaacgacgcaaaaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
14220528 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14220529 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtca |
14220585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 31409009 - 31409293
Alignment:
| Q |
3 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31409009 |
atcaatctgcagcaaaacagtagcaggaaaaagctcccagccccacgcaacccaccttagtaatatgcccttcaaatctaccaacggattcaccaccatg |
31409108 |
T |
|
| Q |
103 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31409109 |
tattttacataagtggttttgaacgacgcataaacttccaataacatctgctacaaattgaaacataattggcaagtaacttgttaaagagttcattgaa |
31409208 |
T |
|
| Q |
203 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31409209 |
gaatgtaaaaagagtggagacaatttcacaaataaatttatctctcatgtcatgtcagatagactatagacttcaaacaatttga |
31409293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 32280638 - 32280598
Alignment:
| Q |
188 |
aaagagttcattgaagaatgtaaaaagagtggagacaattt |
228 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
32280638 |
aaagaattcattgaagaatgtaaaaggagtggagacaattt |
32280598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 14837035 - 14836995
Alignment:
| Q |
188 |
aaagagttcattgaagaatgtaaaaagagtggagacaattt |
228 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
14837035 |
aaagaattcattgaagaatgtaaaaggagtggagacaattt |
14836995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 27964654 - 27964694
Alignment:
| Q |
188 |
aaagagttcattgaagaatgtaaaaagagtggagacaattt |
228 |
Q |
| |
|
||||| |||||| |||||||||||| ||||||||||||||| |
|
|
| T |
27964654 |
aaagaattcattcaagaatgtaaaaggagtggagacaattt |
27964694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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