View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18587_low_17 (Length: 312)
Name: NF18587_low_17
Description: NF18587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18587_low_17 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 279; Significance: 1e-156; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 14208808 - 14208502
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14208808 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14208709 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14208708 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14208609 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcctaaaaacttcttcagctggcagaaggaactcttctatttctcctttatttcaattctcttattgatgcgctctttct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14208608 |
tctcccctcatgtatctcaatcctaaaaacttcttcagctggcagaaggaactcttctatttctcctttatttcaattctcttattgatgcgctctttct |
14208509 |
T |
|
| Q |
301 |
tctctct |
307 |
Q |
| |
|
||||||| |
|
|
| T |
14208508 |
tctctct |
14208502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14212630 - 14212407
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14212630 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14212531 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212530 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14212431 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14212430 |
tctcccctcatgtatctcaatcct |
14212407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14214567 - 14214344
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14214567 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14214468 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214467 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14214368 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14214367 |
tctcccctcatgtatctcaatcct |
14214344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14215536 - 14215313
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14215536 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14215437 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14215436 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14215337 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14215336 |
tctcccctcatgtatctcaatcct |
14215313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14216505 - 14216282
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14216505 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14216406 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14216405 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14216306 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14216305 |
tctcccctcatgtatctcaatcct |
14216282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14217456 - 14217233
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14217456 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14217357 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14217356 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14217257 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14217256 |
tctcccctcatgtatctcaatcct |
14217233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14219377 - 14219154
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14219377 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14219278 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219277 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14219178 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14219177 |
tctcccctcatgtatctcaatcct |
14219154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14210710 - 14210487
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14210710 |
gttttgctgcagattgataagtatctcattgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14210611 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14210610 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14210511 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14210510 |
tctcccctcatgtatctcaatcct |
14210487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14211679 - 14211456
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14211679 |
gttttgctgcagattgataagtatctcattgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14211580 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211579 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14211480 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14211479 |
tctcccctcatgtatctcaatcct |
14211456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14213599 - 14213376
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
14213599 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgcgtttaag |
14213500 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14213499 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14213400 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14213399 |
tctcccctcatgtatctcaatcct |
14213376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14220346 - 14220123
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14220346 |
gttttgctgcagattgataagtatctcattgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14220247 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14220246 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14220147 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14220146 |
tctcccctcatgtatctcaatcct |
14220123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14221297 - 14221074
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14221297 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcgtaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14221198 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14221197 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14221098 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14221097 |
tctcccctcatgtatctcaatcct |
14221074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14209759 - 14209536
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14209759 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14209660 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209659 |
ggatggtagtgaggcttttgtatgcttgggcatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14209560 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14209559 |
tctcccctcatgtatctcaatcct |
14209536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14222266 - 14222043
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14222266 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcgtaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
14222167 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14222166 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgacagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
14222067 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
14222066 |
tctcccctcatgtatctcaatcct |
14222043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14218408 - 14218184
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaa-gacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
14218408 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaa |
14218309 |
T |
|
| Q |
100 |
gggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaata |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218308 |
gggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagatagcttcaatttggtcatttgccactaaaacagatttcaata |
14218209 |
T |
|
| Q |
200 |
ttctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
14218208 |
ttctcccctcatgtatctcaatcct |
14218184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 34 - 224
Target Start/End: Complemental strand, 14223202 - 14223012
Alignment:
| Q |
34 |
gcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaagggatggtagtgaggcttttgtatgcttggcagt |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
14223202 |
gcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaagggatggtagtgaggcttttgtatgcttggcaat |
14223103 |
T |
|
| Q |
134 |
gttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtatctcaatcct |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14223102 |
gttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatattctcccctcatgtatctcaatcct |
14223012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14234969 - 14234932
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttg |
38 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14234969 |
gttttgctgcagattgataagtatctcatcgaggcttg |
14234932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 31409026 - 31408720
Alignment:
| Q |
1 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcannnnnnnngtatagtctgcctgtggtgtgtttaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31409026 |
gttttgctgcagattgataagtatctcatcgaggcttggtgcggaagacttattcatgctgtgcattttttttgtatagtctgcctgtggtgtgtttaag |
31408927 |
T |
|
| Q |
101 |
ggatggtagtgaggcttttgtatgcttggcagtgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31408926 |
ggatggtagtgaggcttttgtatgcttggcaatgttaggtggttagtttatgatagctagcttcaatttggtcatttgccactaaaacagatttcaatat |
31408827 |
T |
|
| Q |
201 |
tctcccctcatgtatctcaatcctaaaaacttcttcagctggcagaaggaactcttctatttctcctttatttcaattctcttattgatgcgctctttct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31408826 |
tctcccctcatgtatctcaatcctaaaaacttcttcagctggcagaaggaactcttctatttctcctttatttcaattctcttattgatgcgctctttct |
31408727 |
T |
|
| Q |
301 |
tctctct |
307 |
Q |
| |
|
||||||| |
|
|
| T |
31408726 |
tctctct |
31408720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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