View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18587_low_2 (Length: 633)

Name: NF18587_low_2
Description: NF18587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18587_low_2
NF18587_low_2
[»] chr5 (48 HSPs)
chr5 (67-392)||(1162778-1163109)
chr5 (397-507)||(1163145-1163252)
chr5 (242-391)||(40418993-40419134)
chr5 (67-224)||(40412251-40412422)
chr5 (415-495)||(40418870-40418950)
chr5 (1-68)||(19142998-19143065)
chr5 (1-68)||(41014331-41014398)
chr5 (1-68)||(24448902-24448970)
chr5 (1-68)||(32703436-32703502)
chr5 (1-68)||(35710325-35710391)
chr5 (1-68)||(43574618-43574686)
chr5 (1-68)||(1850652-1850719)
chr5 (1-68)||(8170039-8170105)
chr5 (2-56)||(7097816-7097870)
chr5 (7-68)||(208989-209050)
chr5 (1-68)||(1405199-1405267)
chr5 (1-57)||(2838802-2838858)
chr5 (1-65)||(7368413-7368476)
chr5 (1-68)||(22907920-22907987)
chr5 (178-237)||(39400652-39400711)
chr5 (7-68)||(42924895-42924957)
chr5 (8-68)||(4619168-4619229)
chr5 (8-68)||(13801831-13801892)
chr5 (8-68)||(27328764-27328825)
chr5 (8-68)||(38879593-38879654)
chr5 (1-65)||(5873377-5873441)
chr5 (1-68)||(22600466-22600534)
chr5 (7-68)||(43334214-43334277)
chr5 (2-55)||(16880703-16880757)
chr5 (506-538)||(1163270-1163302)
chr5 (36-68)||(23974792-23974824)
chr5 (1-68)||(24323760-24323828)
chr5 (1-68)||(24360384-24360452)
chr5 (16-68)||(37024626-37024677)
chr5 (451-495)||(38988292-38988336)
chr5 (415-483)||(39880427-39880495)
chr5 (1-68)||(41425960-41426028)
chr5 (8-61)||(20135623-20135677)
chr5 (7-68)||(39301135-39301197)
chr5 (8-60)||(12006392-12006445)
chr5 (1-60)||(29334415-29334476)
chr5 (4-68)||(34074620-34074685)
chr5 (1-34)||(34154869-34154902)
chr5 (128-217)||(40419145-40419234)
chr5 (36-68)||(1565443-1565475)
chr5 (415-472)||(3300086-3300147)
chr5 (415-472)||(3392979-3393040)
chr5 (36-68)||(22025555-22025587)
[»] chr4 (51 HSPs)
chr4 (237-391)||(25911483-25911629)
chr4 (1-68)||(5648271-5648338)
chr4 (1-68)||(9987889-9987957)
chr4 (1-68)||(5306719-5306786)
chr4 (1-68)||(6430681-6430748)
chr4 (1-68)||(20224996-20225062)
chr4 (1-68)||(40915841-40915908)
chr4 (1-68)||(41018849-41018916)
chr4 (2-68)||(30639392-30639458)
chr4 (1-68)||(17043449-17043517)
chr4 (1-68)||(47528585-47528651)
chr4 (1-68)||(48598880-48598946)
chr4 (1-62)||(7909336-7909397)
chr4 (1-68)||(19027860-19027928)
chr4 (415-495)||(25911695-25911775)
chr4 (1-68)||(37494863-37494931)
chr4 (1-68)||(47443969-47444037)
chr4 (1-68)||(9832368-9832434)
chr4 (2-68)||(39077852-39077917)
chr4 (7-68)||(54175075-54175137)
chr4 (8-68)||(21646976-21647037)
chr4 (1-68)||(25463134-25463202)
chr4 (7-68)||(30581527-30581590)
chr4 (1-68)||(10379998-10380065)
chr4 (1-68)||(29207953-29208019)
chr4 (1-60)||(49796818-49796877)
chr4 (8-68)||(10660416-10660477)
chr4 (8-68)||(10874561-10874622)
chr4 (8-68)||(16408665-16408726)
chr4 (8-68)||(16911574-16911635)
chr4 (7-63)||(20639720-20639777)
chr4 (1-68)||(7385531-7385599)
chr4 (1-68)||(14983846-14983914)
chr4 (1-60)||(25629069-25629129)
chr4 (9-68)||(51420586-51420646)
chr4 (1-68)||(8473677-8473743)
chr4 (1-68)||(32478846-32478908)
chr4 (21-68)||(42164224-42164271)
chr4 (2-68)||(10277813-10277878)
chr4 (4-68)||(11054206-11054269)
chr4 (4-68)||(30496380-30496443)
chr4 (1-68)||(35567182-35567250)
chr4 (1-56)||(51865093-51865149)
chr4 (1-68)||(54967033-54967100)
chr4 (4-56)||(12711507-12711561)
chr4 (7-68)||(49938655-49938713)
chr4 (8-68)||(54730261-54730323)
chr4 (11-68)||(487200-487258)
chr4 (7-68)||(25343199-25343261)
chr4 (3-68)||(47441587-47441653)
chr4 (36-68)||(36589755-36589787)
[»] chr7 (53 HSPs)
chr7 (1-68)||(18512508-18512575)
chr7 (1-68)||(33871965-33872032)
chr7 (1-68)||(2662990-2663056)
chr7 (1-68)||(11617643-11617711)
chr7 (1-68)||(19426944-19427012)
chr7 (1-68)||(10693128-10693194)
chr7 (1-68)||(21172064-21172130)
chr7 (1-68)||(32233190-32233257)
chr7 (1-68)||(34626263-34626330)
chr7 (2-61)||(38604546-38604605)
chr7 (1-68)||(8149000-8149069)
chr7 (8-68)||(46354206-46354267)
chr7 (1-68)||(2541074-2541142)
chr7 (1-68)||(7879650-7879718)
chr7 (1-68)||(27629646-27629714)
chr7 (1-68)||(19265827-19265894)
chr7 (1-68)||(32758273-32758339)
chr7 (1-68)||(42391155-42391221)
chr7 (7-68)||(12473316-12473378)
chr7 (8-68)||(47716471-47716532)
chr7 (1-68)||(23419729-23419797)
chr7 (1-68)||(48735177-48735244)
chr7 (1-68)||(11741807-11741873)
chr7 (1-68)||(31591164-31591230)
chr7 (8-68)||(42805536-42805597)
chr7 (8-68)||(43557484-43557545)
chr7 (1-68)||(42798681-42798749)
chr7 (1-68)||(48123539-48123607)
chr7 (1-68)||(6736902-6736969)
chr7 (1-68)||(13805114-13805181)
chr7 (4-55)||(35787327-35787378)
chr7 (1-68)||(40463889-40463956)
chr7 (1-68)||(42476885-42476951)
chr7 (1-68)||(47077910-47077976)
chr7 (7-68)||(7644968-7645030)
chr7 (14-68)||(22065600-22065654)
chr7 (7-68)||(29907431-29907493)
chr7 (1-68)||(1408469-1408537)
chr7 (1-68)||(28362200-28362268)
chr7 (5-68)||(38262255-38262319)
chr7 (1-68)||(15108452-15108519)
chr7 (7-68)||(16341290-16341352)
chr7 (26-68)||(18327046-18327088)
chr7 (7-68)||(22699031-22699093)
chr7 (1-59)||(23604555-23604612)
chr7 (35-65)||(27697452-27697482)
chr7 (26-68)||(42495916-42495958)
chr7 (1-65)||(14099061-14099126)
chr7 (1-65)||(14409078-14409143)
chr7 (1-67)||(18747499-18747567)
chr7 (1-68)||(19266462-19266530)
chr7 (27-67)||(21220059-21220099)
chr7 (5-64)||(23231573-23231633)
[»] chr2 (45 HSPs)
chr2 (1-68)||(12023974-12024041)
chr2 (1-68)||(17623576-17623644)
chr2 (1-68)||(17668014-17668082)
chr2 (1-65)||(30826052-30826116)
chr2 (3-65)||(30864474-30864536)
chr2 (1-68)||(8455371-8455439)
chr2 (1-68)||(14444741-14444808)
chr2 (1-68)||(23397778-23397844)
chr2 (1-64)||(36871509-36871572)
chr2 (1-68)||(17896271-17896340)
chr2 (1-68)||(22371069-22371134)
chr2 (1-68)||(9671193-9671259)
chr2 (1-68)||(21779316-21779382)
chr2 (1-68)||(25249793-25249860)
chr2 (1-68)||(10546174-10546243)
chr2 (7-68)||(24200686-24200748)
chr2 (1-68)||(19977769-19977837)
chr2 (1-68)||(32781343-32781411)
chr2 (5-68)||(17380296-17380359)
chr2 (1-68)||(27573633-27573700)
chr2 (1-68)||(5450297-5450366)
chr2 (7-68)||(10543710-10543772)
chr2 (1-67)||(39914360-39914428)
chr2 (27-68)||(44604866-44604907)
chr2 (1-68)||(11514448-11514516)
chr2 (1-68)||(25641514-25641581)
chr2 (3-61)||(24860045-24860102)
chr2 (1-68)||(25079772-25079841)
chr2 (12-68)||(5841040-5841097)
chr2 (8-68)||(14530330-14530391)
chr2 (7-68)||(29419946-29420012)
chr2 (1-54)||(39499285-39499338)
chr2 (1-68)||(21377128-21377196)
chr2 (1-60)||(40762289-40762349)
chr2 (1-68)||(99320-99386)
chr2 (2-66)||(2003592-2003658)
chr2 (11-68)||(7214546-7214604)
chr2 (7-68)||(15296468-15296530)
chr2 (16-68)||(33795297-33795350)
chr2 (8-68)||(40416933-40416994)
chr2 (1-68)||(4516406-4516474)
chr2 (9-68)||(17705507-17705567)
chr2 (1-68)||(23145753-23145821)
chr2 (1-68)||(23557543-23557611)
chr2 (1-65)||(26684675-26684742)
[»] chr1 (56 HSPs)
chr1 (1-68)||(32632612-32632679)
chr1 (3-68)||(25468320-25468386)
chr1 (1-68)||(11596548-11596615)
chr1 (3-68)||(24564379-24564445)
chr1 (1-62)||(31382269-31382330)
chr1 (1-68)||(14617073-14617141)
chr1 (1-68)||(23768375-23768443)
chr1 (1-68)||(46991839-46991907)
chr1 (1-68)||(31272430-31272497)
chr1 (1-68)||(34725153-34725219)
chr1 (1-68)||(35253242-35253308)
chr1 (1-68)||(38478337-38478403)
chr1 (1-50)||(21910704-21910753)
chr1 (7-68)||(22324928-22324989)
chr1 (8-68)||(30395790-30395851)
chr1 (1-68)||(6925135-6925203)
chr1 (3-59)||(21723728-21723784)
chr1 (1-68)||(46248008-46248076)
chr1 (6-68)||(18724605-18724668)
chr1 (1-68)||(22930124-22930190)
chr1 (1-68)||(47214546-47214612)
chr1 (7-68)||(2435848-2435910)
chr1 (7-68)||(17470407-17470469)
chr1 (7-68)||(27201682-27201744)
chr1 (7-65)||(33223022-33223080)
chr1 (3-64)||(44485166-44485228)
chr1 (8-68)||(10668260-10668321)
chr1 (8-68)||(18944678-18944739)
chr1 (7-68)||(19974136-19974197)
chr1 (5-65)||(41319865-41319926)
chr1 (2-61)||(23796507-23796567)
chr1 (2-61)||(34149016-34149076)
chr1 (1-68)||(45402129-45402199)
chr1 (1-68)||(45812592-45812658)
chr1 (7-68)||(9939496-9939558)
chr1 (1-68)||(20036255-20036324)
chr1 (7-68)||(22327134-22327196)
chr1 (7-68)||(27136713-27136775)
chr1 (7-68)||(35117829-35117891)
chr1 (8-68)||(20004154-20004215)
chr1 (1-65)||(12126892-12126955)
chr1 (1-68)||(35019265-35019333)
chr1 (1-40)||(4349702-4349741)
chr1 (1-68)||(6983866-6983932)
chr1 (1-68)||(19414474-19414540)
chr1 (1-68)||(27474316-27474383)
chr1 (14-68)||(39215027-39215082)
chr1 (7-63)||(50811979-50812037)
chr1 (1-39)||(10378790-10378828)
chr1 (1-62)||(34679274-34679336)
chr1 (7-68)||(35005158-35005220)
chr1 (7-68)||(45264461-45264523)
chr1 (5-65)||(18335347-18335408)
chr1 (8-68)||(50760288-50760349)
chr1 (36-68)||(2435984-2436016)
chr1 (1-48)||(4430081-4430129)
[»] scaffold0057 (3 HSPs)
scaffold0057 (1-68)||(46843-46911)
scaffold0057 (1-67)||(43672-43737)
scaffold0057 (1-55)||(24827-24882)
[»] chr3 (53 HSPs)
chr3 (1-68)||(40272867-40272935)
chr3 (1-68)||(22609800-22609867)
chr3 (1-68)||(26869741-26869808)
chr3 (1-68)||(31592883-31592949)
chr3 (4-68)||(1217124-1217187)
chr3 (1-68)||(45948893-45948961)
chr3 (1-68)||(54032614-54032682)
chr3 (5-68)||(6411881-6411944)
chr3 (2-68)||(12914091-12914158)
chr3 (1-68)||(16735475-16735542)
chr3 (1-68)||(22122972-22123038)
chr3 (1-68)||(39203550-39203616)
chr3 (1-56)||(47624088-47624143)
chr3 (7-68)||(10795486-10795548)
chr3 (7-68)||(54374407-54374469)
chr3 (8-68)||(8247751-8247812)
chr3 (8-68)||(13628854-13628915)
chr3 (8-68)||(14986991-14987052)
chr3 (8-68)||(46421099-46421160)
chr3 (4-68)||(7696945-7697008)
chr3 (1-68)||(26573161-26573229)
chr3 (1-68)||(33926117-33926185)
chr3 (7-68)||(34420705-34420767)
chr3 (1-68)||(45620883-45620952)
chr3 (7-68)||(53996627-53996689)
chr3 (7-68)||(5173782-5173843)
chr3 (19-68)||(10870025-10870074)
chr3 (8-68)||(13730666-13730727)
chr3 (8-68)||(29366784-29366845)
chr3 (3-60)||(31831241-31831297)
chr3 (1-68)||(4495719-4495787)
chr3 (1-62)||(54484730-54484793)
chr3 (1-68)||(9276292-9276366)
chr3 (1-68)||(43114923-43114993)
chr3 (7-68)||(516443-516505)
chr3 (1-66)||(19751614-19751680)
chr3 (1-66)||(29106585-29106651)
chr3 (7-68)||(45139539-45139601)
chr3 (8-68)||(9607237-9607298)
chr3 (1-50)||(15797274-15797322)
chr3 (6-60)||(21875055-21875111)
chr3 (1-68)||(7943024-7943092)
chr3 (8-59)||(49013537-49013589)
chr3 (1-60)||(52428532-52428592)
chr3 (7-65)||(1121286-1121345)
chr3 (1-66)||(19731038-19731104)
chr3 (1-39)||(34771419-34771457)
chr3 (7-56)||(45786277-45786327)
chr3 (8-68)||(30928209-30928270)
chr3 (12-68)||(39212024-39212081)
chr3 (21-64)||(12525445-12525489)
chr3 (5-68)||(26782400-26782464)
chr3 (9-64)||(50625016-50625072)
[»] chr8 (42 HSPs)
chr8 (1-68)||(13160714-13160781)
chr8 (1-68)||(45071277-45071344)
chr8 (7-68)||(18164821-18164882)
chr8 (1-68)||(36720808-36720876)
chr8 (1-68)||(44530161-44530229)
chr8 (1-68)||(12670305-12670371)
chr8 (8-68)||(7136591-7136652)
chr8 (1-65)||(8897819-8897884)
chr8 (3-68)||(31457185-31457250)
chr8 (1-68)||(5135344-5135412)
chr8 (1-68)||(8483993-8484061)
chr8 (1-68)||(28817681-28817749)
chr8 (1-68)||(29521740-29521808)
chr8 (7-68)||(44781567-44781629)
chr8 (1-67)||(12625902-12625970)
chr8 (1-68)||(35105935-35106004)
chr8 (5-68)||(389655-389721)
chr8 (1-65)||(23000274-23000338)
chr8 (1-68)||(35261691-35261759)
chr8 (8-68)||(26954144-26954206)
chr8 (1-63)||(29877111-29877174)
chr8 (1-68)||(30454152-30454218)
chr8 (8-68)||(6760834-6760895)
chr8 (8-68)||(25250534-25250595)
chr8 (8-68)||(39461058-39461119)
chr8 (1-68)||(5689643-5689711)
chr8 (1-68)||(17823588-17823656)
chr8 (8-68)||(20869560-20869619)
chr8 (2-68)||(22598169-22598236)
chr8 (5-68)||(2626531-2626598)
chr8 (1-68)||(24365114-24365183)
chr8 (26-68)||(28407428-28407470)
chr8 (7-68)||(44742580-44742642)
chr8 (8-68)||(20284133-20284196)
chr8 (8-62)||(20869941-20869996)
chr8 (8-68)||(21070761-21070825)
chr8 (20-69)||(30962847-30962897)
chr8 (8-68)||(17250939-17251000)
chr8 (1-50)||(23286380-23286428)
chr8 (1-37)||(26457773-26457809)
chr8 (5-37)||(28873242-28873274)
chr8 (5-68)||(40604964-40605028)
[»] chr6 (24 HSPs)
chr6 (1-68)||(1354812-1354878)
chr6 (1-68)||(1346976-1347042)
chr6 (8-68)||(2166474-2166535)
chr6 (8-68)||(2178107-2178168)
chr6 (8-68)||(29355919-29355980)
chr6 (12-68)||(9161135-9161191)
chr6 (1-68)||(33138845-33138913)
chr6 (1-68)||(32579438-32579505)
chr6 (7-68)||(7947433-7947495)
chr6 (1-65)||(1941870-1941935)
chr6 (8-68)||(12221979-12222040)
chr6 (5-62)||(25557743-25557799)
chr6 (5-62)||(26097178-26097234)
chr6 (1-67)||(13905034-13905101)
chr6 (5-68)||(28007640-28007702)
chr6 (1-66)||(23240879-23240943)
chr6 (1-68)||(3815132-3815200)
chr6 (13-68)||(8409255-8409311)
chr6 (1-68)||(18277248-18277316)
chr6 (16-68)||(22967183-22967235)
chr6 (16-68)||(23821158-23821210)
chr6 (7-68)||(14553523-14553585)
chr6 (24-68)||(17432352-17432397)
chr6 (36-68)||(14975171-14975203)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-68)||(13079-13146)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-68)||(30591-30657)
[»] scaffold0254 (1 HSPs)
scaffold0254 (8-68)||(4169-4230)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-68)||(48689-48755)
[»] scaffold1176 (1 HSPs)
scaffold1176 (5-68)||(1646-1708)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-68)||(11143-11209)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-68)||(10105-10171)
scaffold0187 (1-68)||(20433-20499)
[»] scaffold0049 (1 HSPs)
scaffold0049 (7-68)||(58989-59051)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-68)||(35072-35141)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-56)||(10834-10890)
[»] scaffold0867 (1 HSPs)
scaffold0867 (1-68)||(3724-3790)
[»] scaffold0954 (1 HSPs)
scaffold0954 (5-64)||(3560-3620)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-33)||(24188-24220)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-68)||(23611-23679)


Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-147; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 67 - 392
Target Start/End: Original strand, 1162778 - 1163109
Alignment:
Q  67 aagaaaggacacatatgagaagcagccacactatactttaatctatttatgtagagttgaaaatctcctaataa------agatggtttgccagtttttc 160  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||| ||||||||||||| |    
T  1162778 aagaaaggacgcatatgagaagcagccacactatactttaatctatttatgtagagttgaaaatctcctaataattataaagatagtttgccagttttgc 1162877  T
Q  161 ttggtacgataggtattagattaatcaaaactcaagtataaatggagtgaactatttgtttataacaaacaatataataaaaacagatccacaaaatatt 260  Q
    || ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1162878 ttcgtatgataggtattagattaatcaaaactcaagtacaaatggagtgaactatttgtttataacaaacaatataataaaaacagatccacaaaatatt 1162977  T
Q  261 tacatccatccagcaccggaatgaatccatataaaaggtagtactataccacaaacaaacaactgtttaagatttacgaaacagatatatacatagcaga 360  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  1162978 tacatccatccagcacatgaacgaatccatataaaaggtagtactataccacaaacaaacaactgtttaaaatttacgaaacagatatttacatagcaga 1163077  T
Q  361 gaagatcaaaccaatgcatattagctgcttac 392  Q
    ||||||||||||||||||||||||||||||||    
T  1163078 gaagatcaaaccaatgcatattagctgcttac 1163109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 397 - 507
Target Start/End: Original strand, 1163145 - 1163252
Alignment:
Q  397 ggaagacaggaaagtagtaaatggtgaaaggaactttatatgccaaatataatgacaggcatggtttcggaagcacgataaacacacataacttgttctg 496  Q
    ||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||     
T  1163145 ggaagacaggaaagta---aatggtgaaaggaactttatatgccgaatataatgacaggcatggtttgggaagcacgatcaacacacataacttgttcta 1163241  T
Q  497 ataaacataaa 507  Q
    |||||||||||    
T  1163242 ataaacataaa 1163252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 242 - 391
Target Start/End: Complemental strand, 40419134 - 40418993
Alignment:
Q  242 aacagatccacaaaatatttacatccatccagcaccggaatgaatccatataaaaggtagtactataccacaaacaaacaactgtttaagatttacgaaa 341  Q
    ||||||||||||||||||||    | || |||||| ||||| |||| |||||||||||| ||| ||||     ||||| ||||||| |||||||| ||||    
T  40419134 aacagatccacaaaatattt----caattcagcacaggaattaatcaatataaaaggtaatacgatac----tacaaataactgttaaagatttatgaaa 40419043  T
Q  342 cagatatatacatagcagagaagatcaaaccaatgcatattagctgctta 391  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  40419042 cagatatttacgtagcagagaagatcgaaccaatgcatattagctgctta 40418993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 40412422 - 40412251
Alignment:
Q  67 aagaaaggacacatatgagaagcagccacactatactttaatctatttatgtagagttgaa--------------aatctcctaataaagatggtttgcc 152  Q
    |||||||||||  |||||||||||||||||||||||||| | ||||||||||| |||| ||              |||||||||||||||||||||||||    
T  40412422 aagaaaggacatgtatgagaagcagccacactatactttcaactatttatgtaaagttaaatagagtagtagattaatctcctaataaagatggtttgcc 40412323  T
Q  153 agtttttcttggtacgataggtattagattaatcaaaactcaagtataaatggagtgaactatttgtttata 224  Q
    |||||| |||  |||||||  || ||||||||||| |||||||| | |||| ||||||||||||| ||||||    
T  40412322 agttttgcttcttacgatacttagtagattaatcagaactcaagaacaaatagagtgaactatttatttata 40412251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 40418950 - 40418870
Alignment:
Q  415 aaatggtgaaaggaactttatatgccaaatataatgacaggcatggtttcggaagcacgataaacacacataacttgttct 495  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||  |||||||||| ||||||| |||||||||||    
T  40418950 aaatggtgaaaggaactttttatgccgaatataatgacaggcatggtttgtgaagcacgatcaacacacgtaacttgttct 40418870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19142998 - 19143065
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  19142998 ccaccatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttccaggacttgaa 19143065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41014398 - 41014331
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  41014398 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaa 41014331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24448970 - 24448902
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||    
T  24448970 ccaccatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaa 24448902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32703502 - 32703436
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||    
T  32703502 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaggacttgaa 32703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35710391 - 35710325
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  35710391 ccaccatttggtgtattgaacgcagccttacccta-ttttacacaagaggctgtttccaggacttgaa 35710325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43574686 - 43574618
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| ||||||||||| ||||||||| |||| |||||||||| ||||||||||||||||||    
T  43574686 ccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaa 43574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1850719 - 1850652
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| |||||||||||||||||||  || ||||||||||||||||| ||||| |||||||||    
T  1850719 ccaccatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttccgggacttgaa 1850652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8170039 - 8170105
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||| ||| |||||||||||||||||    
T  8170039 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaaaaggctgtttccaggacttgaa 8170105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 7097816 - 7097870
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgttt 56  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  7097816 caccatttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 208989 - 209050
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| | ||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  208989 tttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttgccaggacttgaa 209050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1405267 - 1405199
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||||  ||||| ||| |||||| | ||||||||||||||||||||||||    
T  1405267 ccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaa 1405199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2838858 - 2838802
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttc 57  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| | ||||||    
T  2838858 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttc 2838802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7368476 - 7368413
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggactt 65  Q
    |||||| ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||    
T  7368476 ccaccaattggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22907920 - 22907987
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| ||| |||||| || ||||||||||||||| ||||||  |||||||||    
T  22907920 ccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaa 22907987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 39400711 - 39400652
Alignment:
Q  178 agattaatcaaaactcaagtataaatggagtgaactatttgtttataacaaacaatataa 237  Q
    |||||||||||| |||||||| |||| |||||||| |||| |||||||||||||||||||    
T  39400711 agattaatcaaagctcaagtagaaatagagtgaaccatttatttataacaaacaatataa 39400652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 42924895 - 42924957
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| |||||||||  ||||||||||||| ||||||| |||||||||||    
T  42924895 tttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaa 42924957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 4619168 - 4619229
Alignment:
Q  8 ttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||||||  ||||||||||||||| | |||||||||||||||    
T  4619168 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaa 4619229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 13801831 - 13801892
Alignment:
Q  8 ttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||||||  ||||||||||||||| || ||||||||||||||    
T  13801831 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaa 13801892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 27328825 - 27328764
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||  |||||||||||||||||    
T  27328825 ttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaa 27328764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 38879654 - 38879593
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| ||||| | |||||||| |||||||||||||||||    
T  38879654 ttggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaa 38879593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5873377 - 5873441
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggactt 65  Q
    |||||| |||||||| |||||  | ||||||||||||||||||||||||| |||||||| |||||    
T  5873377 ccaccaattggtgtagtgtacttagccttaccctatttttacacaagaggctgtttccacgactt 5873441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22600534 - 22600466
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||| || ||||||||| | |||||||||| |  ||||||||||||||||||    
T  22600534 ccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaa 22600466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 43334277 - 43334214
Alignment:
Q  7 tttggtgtattgtacgcacccttaccc--tatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| ||||||||  | |||||||||| |||| |||||||||||||||||    
T  43334277 tttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaa 43334214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 16880703 - 16880757
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtt 55  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||| ||||    
T  16880703 caccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 538
Target Start/End: Original strand, 1163270 - 1163302
Alignment:
Q  506 aaattgcaacaaagtaagttgttcttgttatcg 538  Q
    |||||||||||||||||||||||||||||||||    
T  1163270 aaattgcaacaaagtaagttgttcttgttatcg 1163302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 23974824 - 23974792
Alignment:
Q  36 tttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||||||||||||    
T  23974824 tttttacacaagaggttgtttccaggacttgaa 23974792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24323760 - 24323828
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| |||||| ||||| ||||||  |||||||| | |||||||||||||||||||||||| |||||||    
T  24323760 ccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaa 24323828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24360384 - 24360452
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| |||||| ||||| ||||||  |||||||| | |||||||||||||||||||||||| |||||||    
T  24360384 ccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaa 24360452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 37024626 - 37024677
Alignment:
Q  16 ttgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||| ||||||||| |||| |||||||||| |||||||||||||||||    
T  37024626 ttgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaa 37024677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 495
Target Start/End: Complemental strand, 38988336 - 38988292
Alignment:
Q  451 acaggcatggtttcggaagcacgataaacacacataacttgttct 495  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||    
T  38988336 acaggcatggtttgggaagcaagatcaacacacataacttgttct 38988292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 483
Target Start/End: Complemental strand, 39880495 - 39880427
Alignment:
Q  415 aaatggtgaaaggaactttatatgccaaatataatgacaggcatggtttcggaagcacgataaacacac 483  Q
    |||||||||||| |||||| |||||| |||||| |||||| |||| ||| ||||||| ||| |||||||    
T  39880495 aaatggtgaaagtaactttttatgccgaatatattgacagacatgttttgggaagcaagatcaacacac 39880427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41426028 - 41425960
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||| ||| |||||||||  ||||||||||| | ||||||||||| |||||||    
T  41426028 ccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaa 41425960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 20135677 - 20135623
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccagg 61  Q
    ||||||||||||||||| ||||||| | ||||| |||||||||| ||||||||||    
T  20135677 ttggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 39301197 - 39301135
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||| ||| |||||| ||||||||| |||| |||||||||||||||| ||| ||||||||    
T  39301197 tttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttgaa 39301135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 12006392 - 12006445
Alignment:
Q  8 ttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccag 60  Q
    ||||||||||||| | | |||||||||| |||||||| ||||||||||||||||    
T  12006392 ttggtgtattgtatggagccttaccctattttttacataagaggttgtttccag 12006445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29334476 - 29334415
Alignment:
Q  1 ccaccatt-tggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccag 60  Q
    |||||||| |||||||||||||||| ||||||| | ||||| |||||||||| |||||||||    
T  29334476 ccaccattctggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccag 29334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 34074620 - 34074685
Alignment:
Q  4 ccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| ||||| ||||||  | |||| ||||||||||| |||||| ||||||||||    
T  34074620 ccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaa 34074685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34154869 - 34154902
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct 34  Q
    |||||||||||||||||||||||| |||||||||    
T  34154869 ccaccatttggtgtattgtacgcagccttaccct 34154902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 40419234 - 40419145
Alignment:
Q  128 aatctcctaataaagatggtttgccagtttttcttggtacgataggtattagattaatcaaaactcaagtataaatggagtgaactattt 217  Q
    |||||||||||||||||||||||| |||||| |||  ||   || ||| ||||||||||||| |||||||  |||  |||| ||||||||    
T  40419234 aatctcctaataaagatggtttgctagttttacttcttagtgtatgtaatagattaatcaaagctcaagtccaaaaagagtaaactattt 40419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 1565475 - 1565443
Alignment:
Q  36 tttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||| |||||||||||||||||||||||||    
T  1565475 tttttactcaagaggttgtttccaggacttgaa 1565443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 472
Target Start/End: Complemental strand, 3300147 - 3300086
Alignment:
Q  415 aaatggtgaaaggaactttatatgccaaata----taatgacaggcatggtttcggaagcac 472  Q
    ||||||||||||| |||||||||||| ||||    |||||||| ||||||||| ||||||||    
T  3300147 aaatggtgaaaggtactttatatgccgaatataattaatgacatgcatggtttgggaagcac 3300086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 472
Target Start/End: Complemental strand, 3393040 - 3392979
Alignment:
Q  415 aaatggtgaaaggaactttatatgccaaata----taatgacaggcatggtttcggaagcac 472  Q
    ||||||||||||| |||||||||||| ||||    |||||||| ||||||||| ||||||||    
T  3393040 aaatggtgaaaggtactttatatgccgaatataattaatgacatgcatggtttgggaagcac 3392979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 22025587 - 22025555
Alignment:
Q  36 tttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| |||||||||||||||||    
T  22025587 tttttacacaagaggctgtttccaggacttgaa 22025555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 237 - 391
Target Start/End: Original strand, 25911483 - 25911629
Alignment:
Q  237 ataaaaacagatccacaaaatatttacatccatccagcaccggaatgaatccatataaaaggtagtactataccacaaacaaacaactgtttaagattta 336  Q
    |||| ||||||||| ||||||||||    | ||||||||| ||||||||||||||||||||||| ||| ||||     ||||||||||||| ||||||||    
T  25911483 ataataacagatccccaaaatattt----caatccagcacaggaatgaatccatataaaaggtaatacgatac----tacaaacaactgttaaagattta 25911574  T
Q  337 cgaaacagatatatacatagcagagaagatcaaaccaatgcatattagctgctta 391  Q
     ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  25911575 tgaaacagatatttacatagcagagaagatcaaaccaatgtatattagctgctta 25911629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5648338 - 5648271
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  5648338 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaa 5648271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9987889 - 9987957
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatt-tttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  9987889 ccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5306719 - 5306786
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||    
T  5306719 ccaccatttggtgtattgtacgcaaccttaccctgattttacacaagaggctgtttccaggacttgaa 5306786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6430681 - 6430748
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||    
T  6430681 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccatgacttgaa 6430748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20225062 - 20224996
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  20225062 ccaccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggttgtttccaggacttgaa 20224996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40915908 - 40915841
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||||    
T  40915908 ccaccatttggtgtattgtacgcagccttaccttgtttttacacaagaggctgtttccaggacttgaa 40915841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41018849 - 41018916
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||    
T  41018849 ccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttccaggacttgaa 41018916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 30639458 - 30639392
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||    
T  30639458 caccatttggtgtattgtacgcagccttaccctgtttttacacaagagtctgtttccaggacttgaa 30639392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17043449 - 17043517
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||    
T  17043449 ccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaa 17043517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 47528585 - 47528651
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||    
T  47528585 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaggacttgaa 47528651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48598880 - 48598946
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||    
T  48598880 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaggacttgaa 48598946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7909336 - 7909397
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccagga 62  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||    
T  7909336 ccaccatttggtgtattgtacgcaaccttaccctgtttttacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19027928 - 19027860
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||    
T  19027928 ccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaa 19027860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 495
Target Start/End: Original strand, 25911695 - 25911775
Alignment:
Q  415 aaatggtgaaaggaactttatatgccaaatataatgacaggcatggtttcggaagcacgataaacacacataacttgttct 495  Q
    |||| |||||||||| ||| |||||| ||||||||||||| |||||||| ||||||| ||| ||||||| |||||||||||    
T  25911695 aaatagtgaaaggaattttttatgccgaatataatgacagacatggtttgggaagcatgatcaacacacgtaacttgttct 25911775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37494931 - 37494863
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| ||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  37494931 ccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaa 37494863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47444037 - 47443969
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  ||||||| ||||||| |||||||||||||||||    
T  47444037 ccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaa 47443969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9832368 - 9832434
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| ||||| |||||||||||    
T  9832368 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgttttcaggacttgaa 9832434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 39077852 - 39077917
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||| ||||||||||| ||||||||| |||| |||||||||| |||||||||||||||||    
T  39077852 caccatttggtatattgtacgcaaccttaccctgtttt-acacaagaggctgtttccaggacttgaa 39077917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 54175137 - 54175075
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttttacacaagaggttg-tttccaggacttgaa 68  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||    
T  54175137 tttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttttccaggacttgaa 54175075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 21647037 - 21646976
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  21647037 ttggtatattgtacgcagccttaccctattttttacacaagaggctgtttccaggacttgaa 21646976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25463202 - 25463134
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| ||||||||| |||| |||  ||||| ||||||||||||||||||||||||||||    
T  25463202 ccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaa 25463134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 30581527 - 30581590
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttt--tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| |||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  30581527 tttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaa 30581590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10379998 - 10380065
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| |||||||||||||||||||   ||| |||||||||||||||||||||||||  ||||||||||    
T  10379998 ccactatttggtgtattgtacgcaattttatcctatttttacacaagaggttgtttgtaggacttgaa 10380065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29207953 - 29208019
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||   |||||||||||||||    
T  29207953 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggcaatttccaggacttgaa 29208019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 49796877 - 49796818
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccag 60  Q
    |||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||||||    
T  49796877 ccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgtttccag 49796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 10660477 - 10660416
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||| ||| || |||||||||||| ||| ||||||||||||||||||||||||    
T  10660477 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaa 10660416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 10874622 - 10874561
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||| ||| || |||||||||||| ||| ||||||||||||||||||||||||    
T  10874622 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaa 10874561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 16408665 - 16408726
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||  |||||||| |||| ||||||||||| |||||||||||||||||    
T  16408665 ttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaa 16408726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 16911635 - 16911574
Alignment:
Q  8 ttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||| |||||| ||||||||||    
T  16911635 ttggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaa 16911574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 20639720 - 20639777
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggac 63  Q
    |||||||||||||||||| |||||||||  ||||||||||||||| ||||||||||||    
T  20639720 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7385531 - 7385599
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| || || |||||||||| |||||||||| |||| |||||||||| ||||||    
T  7385531 ccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaa 7385599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14983914 - 14983846
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||| |||||||||| ||| ||||||||||| |||||||||||||| |||||| | ||||||||    
T  14983914 ccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaagacttgaa 14983846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25629129 - 25629069
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccag 60  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||  |||||||||    
T  25629129 ccaccatttggtgtattgtacacagccttaccctattttttacacaagagactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 51420646 - 51420586
Alignment:
Q  9 tggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||| || ||||||||| |||| |||||||||||||||||||| ||||||||    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaa 51420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8473677 - 8473743
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| ||| |||||||||  ||  |||||||||| |||||||||||||||||    
T  8473677 ccaccatttggtgtattgtatgcagccttaccct-gttaaacacaagaggctgtttccaggacttgaa 8473743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32478846 - 32478908
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||     || ||||||||| ||||||||| |||||||||||||||||||||||    
T  32478846 ccaccatttggtgtatt-----cagccttaccctgtttttacactagaggttgtttccaggacttgaa 32478908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 42164224 - 42164271
Alignment:
Q  21 cgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  42164224 cgcagccttaccctgtttttacacaagaggttgtttccaagacttgaa 42164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 10277813 - 10277878
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||| ||||| |||| ||||| |||||||| |||||| |||| |||||    
T  10277813 caccatttggtgtattgtacgcagccttatccta-ttttatacaagaggctgtttcaaggatttgaa 10277878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 11054206 - 11054269
Alignment:
Q  4 ccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||  ||||||||  |||||||||||||  ||||| |||||||||||    
T  11054206 ccatttggtgtattgtacgcagtcttaccct-gttttacacaagagactgttttcaggacttgaa 11054269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 30496380 - 30496443
Alignment:
Q  4 ccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||| ||||||||  | ||||||||||||| |||||||| ||||||||    
T  30496380 ccatttggtgtattgtatgcagccttacccg-tgtttacacaagaggctgtttccatgacttgaa 30496443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35567250 - 35567182
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| |||||| || |||||||||  |||||||||||| || |||||||| ||||||||    
T  35567250 ccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctgtttccaagacttgaa 35567182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51865093 - 51865149
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgttt 56  Q
    |||||||||||||||||||||||| ||||||| |  ||||||||||||||| |||||    
T  51865093 ccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54967100 - 54967033
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| ||||||| ||| ||||||||| ||||| |||||||||||| ||||||| |||||||    
T  54967100 ccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaacttgaa 54967033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 12711507 - 12711561
Alignment:
Q  4 ccatttggtgtattgtacgcacccttacccta--tttttacacaagaggttgttt 56  Q
    |||||||||||||||||||||  |||||||||  ||||||||||||| |||||||    
T  12711507 ccatttggtgtattgtacgcagtcttaccctatttttttacacaagatgttgttt 12711561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 49938655 - 49938713
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| |   |||||||  ||||||||||||||| |||||||||||||||||    
T  49938655 tttggtgtattgtacac---cttaccccgtttttacacaagaggctgtttccaggacttgaa 49938713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 54730323 - 54730261
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt--acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| |||||| ||||| |||||||||  |||||||||| |||||| ||||||||||    
T  54730323 ttggtgtattatacgcagccttatcctatttttttacacaagaggctgtttctaggacttgaa 54730261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 487200 - 487258
Alignment:
Q  11 gtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| | ||||| | |||| |||||||||||||||||||| ||||||||    
T  487200 gtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaa 487258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 25343261 - 25343199
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| |||||||||  ||||||||||||||  | ||||||| |||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaa 25343199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 47441587 - 47441653
Alignment:
Q  3 accatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||| || ||||||||| ||||||||| |||||  ||||||  |||||||||    
T  47441587 accatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaa 47441653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 36589787 - 36589755
Alignment:
Q  36 tttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| |||||||||||||||||    
T  36589787 tttttacacaagaggctgtttccaggacttgaa 36589755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 7e-23; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18512508 - 18512575
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  18512508 ccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttccaggacttgaa 18512575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33871965 - 33872032
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  33871965 ccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttccaggacttgaa 33872032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2662990 - 2663056
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  2662990 ccaccatttggtgtattgtacgcagccttacccta-ttttacacaagaggctgtttccaggacttgaa 2663056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11617643 - 11617711
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  11617643 ccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaa 11617711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19426944 - 19427012
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||||||    
T  19426944 ccaccatttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaa 19427012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10693128 - 10693194
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||    
T  10693128 ccaccatttggtgtattgtacgcagccttaccct-cttttacacaagaggctgtttccaggacttgaa 10693194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21172064 - 21172130
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||    
T  21172064 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaggacttgaa 21172130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32233190 - 32233257
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| | |||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  32233190 ccaccatttggtgtaatatacgctgccttaccctgtttttacacaagaggttgtttccaggacttgaa 32233257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34626263 - 34626330
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||| |||| |||||||||||||||||    
T  34626263 ccaccatttggtgtattgaacgcagccttaccctgtttttacacaggaggctgtttccaggacttgaa 34626330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 38604605 - 38604546
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccagg 61  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  38604605 caccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8149000 - 8149069
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt--acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||| |||| |||||||||||    
T  8149000 ccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaa 8149069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 46354267 - 46354206
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  46354267 ttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaa 46354206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2541074 - 2541142
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||| ||||||| ||||||||| |||| ||||||||||| |||||||||||||||||    
T  2541074 ccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 2541142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7879718 - 7879650
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||| | ||||| ||||||||| ||||||||||||||||||    
T  7879718 ccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaa 7879650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27629714 - 27629646
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||| ||||||||| ||||| |||||||||| |||||||||||||||||    
T  27629714 ccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaa 27629646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19265894 - 19265827
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| || ||| |||| ||||||||    
T  19265894 ccaccatttggtgtattgtacgcagccttaccctctttttacacaagcggctgtatccaagacttgaa 19265827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32758339 - 32758273
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||||| |||||||||||||||||    
T  32758339 ccaccatttggtgtattgtacacagccttaccctgtttt-acacaagaggctgtttccaggacttgaa 32758273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42391155 - 42391221
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||| | |||||||||||||||||    
T  42391155 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaagctgtttccaggacttgaa 42391221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 12473378 - 12473316
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||| |||||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaa 12473316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 47716532 - 47716471
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||    
T  47716532 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 47716471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23419729 - 23419797
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||||  ||||||||  ||||||||||||||| ||||||||| |||||||    
T  23419729 ccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaa 23419797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48735177 - 48735244
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttcc-aggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||| |  |||||||||||||||||||||| ||||||||||    
T  48735177 ccaccatttggtgtattgtacgcagccttaccgt-gttttacacaagaggttgtttccaaggacttgaa 48735244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11741873 - 11741807
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||| |||||||| ||| | ||||| |||||||||||    
T  11741873 ccaccatttggtgtattgtacgcagccttacccta-ttttacactagaagctgttttcaggacttgaa 11741807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31591164 - 31591230
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||  ||||||||||||| |||||| || |||| ||||||||||||||||||||||||||||    
T  31591164 ccaccatttattgtattgtacgcagccttactctgtttt-acacaagaggttgtttccaggacttgaa 31591230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 42805597 - 42805536
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| || ||||||||| ||||| |||||||||| |||||||||||||||||    
T  42805597 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaa 42805536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 43557545 - 43557484
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||| || ||||| |||||||||| |||||||||||||||||    
T  43557545 ttggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaa 43557484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42798749 - 42798681
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||| |  ||||||||||||||  |||||||| ||||||||    
T  42798749 ccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaa 42798681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48123539 - 48123607
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatt-tttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| |||   ||||||| || ||||||||||||| |||||||||||||||||    
T  48123539 ccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaa 48123607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6736969 - 6736902
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| |||  |||||| | |||||| ||||||||||||||  ||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaa 6736902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13805181 - 13805114
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||| || ||||||||   |||||||| ||||| | |||||||||||||||    
T  13805181 ccaccatttggtgtattgtacacagccttacccctgttttacaccagaggctatttccaggacttgaa 13805114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 35787327 - 35787378
Alignment:
Q  4 ccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtt 55  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||||| ||||    
T  35787327 ccatttggtgtattgtacgcaaccttaccatgtttttacacaagaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40463956 - 40463889
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||| ||||||||  ||||||||||||||  |||||| | ||||||||    
T  40463956 ccaccatttggtgtattatacgcagccttacccagtttttacacaagagactgtttctatgacttgaa 40463889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42476951 - 42476885
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||| |||  |||||||||||||  ||||||||| |||||||    
T  42476951 ccaccatttggtgtattgtacgcagcctta-ccttgttttacacaagagactgtttccagaacttgaa 42476885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 47077910 - 47077976
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||| |||||||||||||| | |||| ||||||| |||||||||  |||||||||||||||||    
T  47077910 ccaccattttgtgtattgtacgcaactttactctatttt-acacaagagactgtttccaggacttgaa 47077976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 7645030 - 7644968
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||   |||||||| ||||| |||||||||| |||||||||||||||||    
T  7645030 tttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaa 7644968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 22065654 - 22065600
Alignment:
Q  14 tattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||| ||| | ||||||||||||||||||||||||||||||||  |||||||    
T  22065654 tattgtatgcagctttaccctatttttacacaagaggttgtttccaaaacttgaa 22065600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 29907493 - 29907431
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| ||||| |||||| |||||||| |||||||||| |||||| ||||||||||    
T  29907493 tttggtgtattgaacgcagccttacactattttttacacaagaggctgtttctaggacttgaa 29907431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1408537 - 1408469
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| |||||||||| || ||||||| | ||||| |||||||||| | |||||||||||||||    
T  1408537 ccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28362200 - 28362268
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacc-ctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||    |||||||||||||||  ||||| ||||||||||    
T  28362200 ccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaa 28362268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 38262255 - 38262319
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||| ||| | ||||| |||||| ||||||||||  |||||||||||||||||    
T  38262255 catttggtgtattgtatgcaacattaccatattttttacacaagagactgtttccaggacttgaa 38262319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15108452 - 15108519
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| ||||| |||||||||| || ||||||| | |||||||||||||   |||||||||||||||||    
T  15108452 ccactatttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaa 15108519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 16341352 - 16341290
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||| | |||||||||  ||||||||||||||| |||||| || |||||||    
T  16341352 tttggtgtattgtacgtagccttaccctgttttttacacaagaggctgtttctagaacttgaa 16341290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 18327088 - 18327046
Alignment:
Q  26 ccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||    
T  18327088 ccttaccctgtttttacacaagaggctgtttccgggacttgaa 18327046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 22699031 - 22699093
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||  ||||||||  ||||||||||||||  | |||||||||||||||    
T  22699031 tttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaa 22699093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23604555 - 23604612
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttcca 59  Q
    |||||||||| |||||||| | ||  |||||||| ||||||||||||||||||||||||    
T  23604555 ccaccatttgatgtattgt-cacaatcttaccctgtttttacacaagaggttgtttcca 23604612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 27697482 - 27697452
Alignment:
Q  35 atttttacacaagaggttgtttccaggactt 65  Q
    |||||||||||||||||||||||||||||||    
T  27697482 atttttacacaagaggttgtttccaggactt 27697452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 42495916 - 42495958
Alignment:
Q  26 ccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||| |||||| |||||||| |||||||||||||||||    
T  42495916 ccttaccctgtttttatacaagaggctgtttccaggacttgaa 42495958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14099061 - 14099126
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggactt 65  Q
    ||||||||||||||||||||||||  |||| |||  ||||||||||| ||| | ||||||||||||    
T  14099061 ccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggactt 14099126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14409078 - 14409143
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggactt 65  Q
    ||||||||||||||||||||||||  |||| |||  ||||||||||| ||| | ||||||||||||    
T  14409078 ccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggactt 14409143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18747567 - 18747499
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta--tttttacacaagaggttgtttccaggacttga 67  Q
    |||||| |||||||||| |||||| |||||||||   ||||||||||| ||| |||||||| |||||||    
T  18747567 ccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctgtttccaagacttga 18747499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19266530 - 19266462
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| ||||||||||||||||||| |||||||||  ||||||| |||| || | ||| |||||||||||    
T  19266530 ccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaa 19266462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 21220059 - 21220099
Alignment:
Q  27 cttaccctatttttacacaagaggttgtttccaggacttga 67  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  21220059 cttatcctttttttacacaagtggttgtttccaggacttga 21220099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 23231633 - 23231573
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggact 64  Q
    |||| |||||||| |||||| ||||||| ||| |||||||||||||| | |||||||||||    
T  23231633 cattcggtgtattatacgcagccttaccttatattttacacaagaggctctttccaggact 23231573  T

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Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12023974 - 12024041
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  12023974 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaa 12024041  T

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Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17623644 - 17623576
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||    
T  17623644 ccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaa 17623576  T

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Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17668082 - 17668014
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  17668082 ccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaa 17668014  T

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Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30826116 - 30826052
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggactt 65  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  30826116 ccaccatttggtgtattgtacgcaaccttaccctatttttacacaagaggctgtttccaagactt 30826052  T

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Target: chr2; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 30864474 - 30864536
Alignment:
Q  3 accatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggactt 65  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  30864474 accatttggtatattgtacgcacccttaccctatttttacacaagaggctgtttccatgactt 30864536  T

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Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8455371 - 8455439
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||    
T  8455371 ccaccatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaa 8455439  T

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Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14444808 - 14444741
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||| |||| || ||||||||| ||||||||||||||| |||||||||||||||||    
T  14444808 ccaccatttggtgtatcgtacacagccttaccctgtttttacacaagaggctgtttccaggacttgaa 14444741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23397844 - 23397778
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||||| |||||||||||||||||    
T  23397844 ccaccatttggtgtattgtacgtagccttacccta-ttttacacaagaggctgtttccaggacttgaa 23397778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36871572 - 36871509
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggact 64  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||| |||||||||||||    
T  36871572 ccaccatttggtgtattgtacgcagccttaccctgttttcacacaagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17896340 - 17896271
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat--ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||    
T  17896340 ccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaa 17896271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22371134 - 22371069
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| |||||||||  |||| |||||||||||||||||    
T  22371134 ccaccatttggtgtattgtacgcagccttaccctgtttttacac--gaggctgtttccaggacttgaa 22371069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9671259 - 9671193
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||| |||||    
T  9671259 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaggatttgaa 9671193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21779316 - 21779382
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| ||| |||||||||||||    
T  21779316 ccaccatttggtgtattgtacgcaaccttaccct-gttttacacaagaggctgtctccaggacttgaa 21779382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25249793 - 25249860
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||||  |||||||| ||||||||    
T  25249793 ccaccatttggtgtattgtacgcagccttaccctgtttgtacacaagagactgtttccatgacttgaa 25249860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10546243 - 10546174
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccc--tatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||  | |||||| |||||||| |||||||||||||||||    
T  10546243 ccaccatttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaa 10546174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 24200686 - 24200748
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 24200748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19977769 - 19977837
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||| |||| |||||||| |||||| ||||||||| |||||||    
T  19977769 ccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccagaacttgaa 19977837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32781343 - 32781411
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||||  ||||||||    
T  32781343 ccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaa 32781411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 17380296 - 17380359
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| || || ||||||||| ||| |||||||||||||||||||| ||||||||    
T  17380296 catttggtgtattgcacacaaccttaccctgtttatacacaagaggttgtttccaagacttgaa 17380359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27573700 - 27573633
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||| | ||| ||||||||||| |||| || |||||||||    
T  27573700 ccaccatttggtgtattgtacgcagccttaccatgtttatacacaagaggctgttgcccggacttgaa 27573633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5450366 - 5450297
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt--acacaagaggttgtttccaggacttgaa 68  Q
    ||||| |||||||||||||||||| ||||||| | |||||  |||||||||||||||||||||| |||||    
T  5450366 ccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaa 5450297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 10543772 - 10543710
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| |||||||||  |||||||||||||||  ||||||||||||||||    
T  10543772 tttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaa 10543710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39914360 - 39914428
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt--tacacaagaggttgtttccaggacttga 67  Q
    |||||||| |||||||||||| || ||||||||| ||||  ||||||||||||||||||||| ||||||    
T  39914360 ccaccattcggtgtattgtacacatccttaccctgtttttttacacaagaggttgtttccagtacttga 39914428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 44604907 - 44604866
Alignment:
Q  27 cttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  44604907 cttaccctgtttttacacaagaggttgtttccaggacttgaa 44604866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11514516 - 11514448
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||  |  ||||||||||||||| ||||||||||| |||||    
T  11514516 ccaccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaa 11514448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25641581 - 25641514
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| ||||||||||||||||||| | ||||||| |||| |||||| | | |||||||||||||||||    
T  25641581 ccacaatttggtgtattgtacgcaactttaccctgttttcacacaaaatgctgtttccaggacttgaa 25641514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 24860045 - 24860102
Alignment:
Q  3 accatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccagg 61  Q
    |||||||||||||||||||||| || |||| | ||||||||| ||||||||||||||||    
T  24860045 accatttggtgtattgtacgcagcc-taccatgtttttacaccagaggttgtttccagg 24860102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25079772 - 25079841
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt--tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| ||||||||||||||| ||||||| | ||||  |||||||||||||||||| | ||||||||    
T  25079772 ccaccattcggtgtattgtacgcatccttaccttgtttttttacacaagaggttgtttctaagacttgaa 25079841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 5841097 - 5841040
Alignment:
Q  12 tgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||| ||||||||||| |||||||||| ||| |||||| ||||||||||    
T  5841097 tgtattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaa 5841040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 14530391 - 14530330
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| | ||||||||| ||||| | |||||||| |||||||||||||||||    
T  14530391 ttggtgtattgtacgtagccttaccctgttttttatacaagaggctgtttccaggacttgaa 14530330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 29419946 - 29420012
Alignment:
Q  7 tttggtgtattgtacgcacc----cttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| |    ||||||||  |||||||||||||||||||||||||||||||||    
T  29419946 tttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaa 29420012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39499285 - 39499338
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgt 54  Q
    |||||||||| ||||||||||||| | |||||||||||||| ||||| ||||||    
T  39499285 ccaccatttgatgtattgtacgcagctttaccctatttttatacaagtggttgt 39499338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21377128 - 21377196
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||| ||||||| || |||||||||  ||||||||||||||| |||||| | ||||||||    
T  21377128 ccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaa 21377196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40762289 - 40762349
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccc-tatttttacacaagaggttgtttccag 60  Q
    |||||||||||||||||||||| | ||||||||   ||||||||||||||| |||||||||    
T  40762289 ccaccatttggtgtattgtacgtagccttacccagttttttacacaagaggctgtttccag 40762349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 99320 - 99386
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||| || | |||||  |||||||| |||||| ||||||||||    
T  99320 ccaccatttggtgtattgtacgcagccttgccatgttttt-tacaagaggctgtttctaggacttgaa 99386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 2003592 - 2003658
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccc--tatttttacacaagaggttgtttccaggacttg 66  Q
    ||||||||| ||||||||||||| ||||||||  | ||||||| |||| || |||||||||||||||    
T  2003592 caccatttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttg 2003658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 7214604 - 7214546
Alignment:
Q  11 gtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| ||||||||| | |||||||||||||  |||||||| ||||||||    
T  7214604 gtgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaa 7214546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 15296468 - 15296530
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||| ||||||||| | |||||||||| ||| ||||||| |||||||||    
T  15296468 tttggtatattgtacgcagccttaccctgtattttacacaacaggctgtttccgggacttgaa 15296530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 33795350 - 33795297
Alignment:
Q  16 ttgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||| ||||||||| ||||| || ||||||||||||||| |||||||||    
T  33795350 ttgtacgcagccttaccctgttttttacccaagaggttgtttccgggacttgaa 33795297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 40416933 - 40416994
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| || |||| |||| ||||| | ||||||||||||||||| ||||||||    
T  40416933 ttggtgtattgtacacagcctttccctgttttttatacaagaggttgtttccatgacttgaa 40416994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4516406 - 4516474
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||||||| | || |||| |||| ||||||||||| |||||| || |||||||    
T  4516406 ccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctgtttctagaacttgaa 4516474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 17705567 - 17705507
Alignment:
Q  9 tggtgtattgtacgcacccttaccctatt-tttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||| || |||||| || || |||||||||||||  ||||||||||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaa 17705507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23145753 - 23145821
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||||||| |||||| ||  ||||||||||||||  ||||| || ||||||||    
T  23145753 ccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaa 23145821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23557543 - 23557611
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||||||| |||||| ||  ||||||||||||||  ||||| || ||||||||    
T  23557543 ccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaa 23557611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26684675 - 26684742
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta--tttttacacaagaggt-tgtttccaggactt 65  Q
    ||||||||| || ||||||||||| ||||||| ||  |||||||||||||||| ||||| ||||||||    
T  26684675 ccaccatttagtatattgtacgcagccttaccatatttttttacacaagaggtctgttttcaggactt 26684742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 7e-23; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32632612 - 32632679
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  32632612 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaa 32632679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 25468320 - 25468386
Alignment:
Q  3 accatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  25468320 accatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaa 25468386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11596615 - 11596548
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  11596615 ccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttgaa 11596548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 24564445 - 24564379
Alignment:
Q  3 accatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaa 24564379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31382269 - 31382330
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccagga 62  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  31382269 ccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14617141 - 14617073
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatt-tttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||| | || ||||||||||||| |||||||||||||||||    
T  14617141 ccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgtttccaggacttgaa 14617073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23768375 - 23768443
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||| |||||||| ||||||||    
T  23768375 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaa 23768443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 46991907 - 46991839
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||| |||||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||    
T  46991907 ccaccattcggtgtattgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaa 46991839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31272430 - 31272497
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| |||  |||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  31272430 ccaccatttgatgtgctgtacgcagccttaccatgtttttacacaagaggttgtttccaggacttgaa 31272497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34725153 - 34725219
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||| |||||||||||||| ||||||||| |||| |||||||||| |||||||||||||||||    
T  34725153 ccaccatttagtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaa 34725219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35253242 - 35253308
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||| ||||||||||    
T  35253242 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttcgaggacttgaa 35253308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38478337 - 38478403
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||| ||||||||||    
T  38478337 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttctaggacttgaa 38478403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21910704 - 21910753
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagagg 50  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  21910704 ccaccatttggtgtattgtacgcaaccttaccctatttttacataagagg 21910753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 22324989 - 22324928
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||| |||||||| ||||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtttccaagacttgaa 22324928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30395790 - 30395851
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||    
T  30395790 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 30395851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6925203 - 6925135
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| |||||||||| |||| ||||||||||| |||||||||||||| | |||||||||||||||    
T  6925203 ccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatttccaggacttgaa 6925135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 21723784 - 21723728
Alignment:
Q  3 accatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttcca 59  Q
    ||||||||||||||||||| || |||||||||||||||| |||||||| ||||||||    
T  21723784 accatttggtgtattgtactcagccttaccctatttttatacaagaggctgtttcca 21723728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 46248008 - 46248076
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||||  ||||||||  ||||||||||||||| |||||||| ||||||||    
T  46248008 ccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaa 46248076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 18724605 - 18724668
Alignment:
Q  6 atttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||| || ||||||||| |||| ||||||||||| |||||||||||||||||    
T  18724605 atttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaa 18724668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22930124 - 22930190
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||| | || ||||||||| ||||||||||| ||| |||||||||||||||||    
T  22930124 ccaccatttggtgtattgt-cacaaccttaccctgtttttacacaaaaggctgtttccaggacttgaa 22930190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47214612 - 47214546
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  ||||| |||||||  |||||||||||||||||    
T  47214612 ccaccatttggtgtattgtacgcaaccttaccct-gttttaaacaagagactgtttccaggacttgaa 47214546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 2435848 - 2435910
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||  |||||||||||||| ||||| |||| |||||||||||||||||    
T  2435848 tttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaa 2435910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 17470407 - 17470469
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| |||||||||  ||||||||||||||| |||||| ||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaa 17470469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 27201744 - 27201682
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| ||||||||| ||| | |||||||||| |||||||||||||||||    
T  27201744 tttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaa 27201682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 33223080 - 33223022
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggactt 65  Q
    |||||||||||||||||| |||| |||| ||||||||||||||| |||||||| |||||    
T  33223080 tttggtgtattgtacgcaacctttccctgtttttacacaagaggctgtttccatgactt 33223022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 44485166 - 44485228
Alignment:
Q  3 accatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggact 64  Q
    |||||||||||||||||||||| ||||||| | | ||||||||||| ||||||||||||||||    
T  44485166 accatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggact 44485228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 10668321 - 10668260
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||| | ||||| |||||||||| |||||||||||||||||    
T  10668321 ttggtgtattgtacgcaaccttaccttgttttttacacaagaggctgtttccaggacttgaa 10668260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 18944739 - 18944678
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||| ||||||    
T  18944739 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaa 18944678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 19974136 - 19974197
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| |||| ||||||||||||||  |||| |||||||| ||||||||    
T  19974136 tttggtgtattgtacgcaaccttgccctatttttacacttgaggctgtttccaagacttgaa 19974197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 41319865 - 41319926
Alignment:
Q  5 catttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggactt 65  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||  ||||||||||||||    
T  41319865 catttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggactt 41319926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 23796567 - 23796507
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccagg 61  Q
    ||||||||||||||||||||||| ||||||  | |||||||||||||||| ||||||||||    
T  23796567 caccatttggtgtattgtacgcaaccttacattgatttttacacaagaggctgtttccagg 23796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 34149016 - 34149076
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccagg 61  Q
    ||||||||||| | ||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  34149016 caccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttccagg 34149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45402199 - 45402129
Alignment:
Q  1 ccaccatttggtgtattgtacgcacc-ctt--accctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||||   |||  ||||| ||||||||||||||| |||||||||||||||||    
T  45402199 ccaccatttggtgtattgtacgcagaacttgaaccctgtttttacacaagaggctgtttccaggacttgaa 45402129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45812592 - 45812658
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| ||| |||||||||  |||||||||||||  ||||| |||||||||||    
T  45812592 ccaccatttggtgtattgtatgcagccttaccct-cttttacacaagagactgttttcaggacttgaa 45812658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 9939558 - 9939496
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattt-ttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| ||||| ||||||| | ||| ||| ||||||||||||||||||||||||||    
T  9939558 tttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggttgtttccaggacttgaa 9939496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20036324 - 20036255
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattt--ttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| |||||  |||||||| | |  ||||||||||| ||||||||||||||||||    
T  20036324 ccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaa 20036255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 22327196 - 22327134
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||| || |||| || ||||||||| ||||| ||||||||||||||||||||||||||||    
T  22327196 tttggtgcatcgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaa 22327134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 27136713 - 27136775
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| ||||||| | |||| |||||||||||||||| |||| |||||||    
T  27136713 tttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaa 27136775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 35117829 - 35117891
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| || ||||||||| | |||||||||||||| | |||||||||||||||    
T  35117829 tttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaa 35117891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 20004154 - 20004215
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||| | ||||| |||| ||||| |||||||||||||||||    
T  20004154 ttggtgtattgtacgcagccttaccttgttttttacacgagaggctgtttccaggacttgaa 20004215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12126892 - 12126955
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggactt 65  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||||| | ||||||||| ||||    
T  12126892 ccacaatttggtgtattgtacgcagccttaccct-gttttacacaagaagctgtttccagaactt 12126955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35019333 - 35019265
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||| ||| |||||  || ||||||| |||||||||||||| |||||||||||    
T  35019333 ccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttgtttacaggacttgaa 35019265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4349741 - 4349702
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt 40  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  4349741 ccaccatttggtgtattgtacgcagccttaccctgttttt 4349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6983866 - 6983932
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||||  |||||||| |||||  | | |||| |||||||||||||||||    
T  6983866 ccaccatttggtgtattgtacgcatacttaccctgttttt-tatacgaggctgtttccaggacttgaa 6983932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19414540 - 19414474
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||| |||  ||||||| |||||| | |||| ||||||||||    
T  19414540 ccaccatttggtgtattgtacgcagccttaacct-gttttacataagaggctctttctaggacttgaa 19414474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27474383 - 27474316
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||  |||||||||||||| | || |||| ||||||||||||||  |||||||| ||||||||    
T  27474383 ccaccattcagtgtattgtacgcagctttgccctgtttttacacaagagactgtttccaagacttgaa 27474316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 39215027 - 39215082
Alignment:
Q  14 tattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||| ||||||||  |||| ||||||||||||||||||||| |||||||    
T  39215027 tattgtacgcagccttacccagttttttacacaagaggttgtttccagtacttgaa 39215082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 50812037 - 50811979
Alignment:
Q  7 tttggtgtattgtacgcacccttaccc--tatttttacacaagaggttgtttccaggac 63  Q
    |||||||||||||||||| ||||||||  | ||||||||||||| | ||||||||||||    
T  50812037 tttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggac 50811979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10378790 - 10378828
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  10378790 ccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34679274 - 34679336
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccagga 62  Q
    |||||||||| ||||| |||||||  |||||||| |||| |||||||||||||||||| ||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttctagga 34679336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 35005220 - 35005158
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| ||| |||||||||  ||||||||||||||| ||||| || ||||||||    
T  35005220 tttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaagacttgaa 35005158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 45264461 - 45264523
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattttta-cacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| || || |||||| || |||||  |||||||||||||||||||||||||||    
T  45264461 tttggtgtattgcacacagccttactctgttttttgcacaagaggttgtttccaggacttgaa 45264523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 18335347 - 18335408
Alignment:
Q  5 catttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggactt 65  Q
    |||||| ||||||||||||| | ||||||| ||||||| |||||||  ||||||||||||||    
T  18335347 catttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggactt 18335408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 50760288 - 50760349
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| |||||| ||||||||  |||| ||||||||||| ||||| |||||||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaa 50760349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 2435984 - 2436016
Alignment:
Q  36 tttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| ||||||||||||||||||||||    
T  2435984 tttttacacaggaggttgtttccaggacttgaa 2436016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4430081 - 4430129
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaaga 48  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||||||    
T  4430081 ccaccatttggtgtattgtacgcagtcttaccctgttttttacacaaga 4430129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 53; Significance: 4e-21; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 46911 - 46843
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||    
T  46911 ccaccatttggtgtattgtacgcaaccttaccctattttttacacaagaggttgtttccagcacttgaa 46843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43737 - 43672
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttga 67  Q
    |||||||||||||||||||||||| ||||| |||  |||||||||||| | ||||||||| ||||||    
T  43737 ccaccatttggtgtattgtacgcagcctta-ccttgttttacacaagacgctgtttccagaacttga 43672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24827 - 24882
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtt 55  Q
    |||||||||||||| ||||||||| |||||||||  ||||||||||||||| ||||    
T  24827 ccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt 24882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 4e-21; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40272867 - 40272935
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  40272867 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaa 40272935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22609867 - 22609800
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||    
T  22609867 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaagacttgaa 22609800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26869808 - 26869741
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||    
T  26869808 ccaccatttggtgtattgtacgcagccttaccctgtttttacaccagaggctgtttccaggacttgaa 26869741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31592949 - 31592883
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||    
T  31592949 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaggacttgaa 31592883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 1217187 - 1217124
Alignment:
Q  4 ccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||| |||||||||||||||||    
T  1217187 ccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaa 1217124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45948893 - 45948961
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  45948893 ccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgtttccaggaattgaa 45948961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 54032614 - 54032682
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| ||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  54032614 ccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaa 54032682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 6411881 - 6411944
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||||| || ||||||||    
T  6411881 catttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttacaagacttgaa 6411944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 12914091 - 12914158
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||  ||||||||| |||| ||||||||||| |||||||||||||||||    
T  12914091 caccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaa 12914158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16735542 - 16735475
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| |||||  |||||||| |||||| ||||||||||    
T  16735542 ccaccatttggtgtattgtacgcagccttaccctgtttttctacaagaggctgtttcgaggacttgaa 16735475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22122972 - 22123038
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||  |||||||||||||||||    
T  22122972 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagagactgtttccaggacttgaa 22123038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39203616 - 39203550
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||| ||||||||||    
T  39203616 ccaccatttggtgtattgtacgcaaccttaccct-gttttacacaagaggctgtttcaaggacttgaa 39203550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47624143 - 47624088
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgttt 56  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  47624143 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 10795486 - 10795548
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||    
T  10795486 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaa 10795548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 54374407 - 54374469
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  54374407 tttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagacttgaa 54374469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 8247751 - 8247812
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||    
T  8247751 ttggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaa 8247812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 13628854 - 13628915
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattt-ttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||    
T  13628854 ttggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaa 13628915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 14987052 - 14986991
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||    
T  14987052 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 14986991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 46421099 - 46421160
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||    
T  46421099 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 46421160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 7696945 - 7697008
Alignment:
Q  4 ccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||  |||||||||||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccct-gttttacacaagagactgtttccaggacttgaa 7697008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26573229 - 26573161
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||||||| |||||||||  |||||||||| |||| |||||||||||||||||    
T  26573229 ccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaa 26573161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33926185 - 33926117
Alignment:
Q  1 ccaccatt-tggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| ||||||||||||| || ||||||||| ||||||||||||||| | |||||||||||||||    
T  33926185 ccaccattatggtgtattgtacacagccttaccctgtttttacacaagaggctatttccaggacttgaa 33926117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 34420705 - 34420767
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| ||||||| ||||||||| |||| ||||||||||| |||||||||||||||||    
T  34420705 tttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 34420767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45620883 - 45620952
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccc--tatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||||||| ||||||||  | ||||||||||||||| ||||||||| |||||||    
T  45620883 ccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaa 45620952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 53996627 - 53996689
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| ||| ||||||||| |||| |||||||||||||||||||| ||||||||    
T  53996627 tttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaa 53996689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 5173782 - 5173843
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| | ||| ||||||  | |||||||||||||||||||||||||||||||||    
T  5173782 tttggtgtattgcatgcaaccttactttgtttttacacaagaggttgtttccaggacttgaa 5173843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 10870025 - 10870074
Alignment:
Q  19 tacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  10870025 tacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaa 10870074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 13730666 - 13730727
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| || ||||||||| |||| ||||||||||| |||||||||||||||||    
T  13730666 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaa 13730727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 29366784 - 29366845
Alignment:
Q  8 ttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||||||  |||||| |||||||| |||||||||||||||||    
T  29366784 ttggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaa 29366845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 31831297 - 31831241
Alignment:
Q  3 accatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccag 60  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||    
T  31831297 accatttggtgtattgtatgcagccttacccta-ttttacacaagaggctgtttccag 31831241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4495719 - 4495787
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||| ||| | ||| |||||||||||    
T  4495719 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaa 4495787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 54484793 - 54484730
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacc--ctatttttacacaagaggttgtttccagga 62  Q
    |||||||||||||||||||||||| |||||||   | ||||||||||||||| |||||||||||    
T  54484793 ccaccatttggtgtattgtacgcagccttaccttgtttttttacacaagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9276366 - 9276292
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaa------gaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||      ||||||||||||||||||||||    
T  9276366 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgaggttgtttccaggacttgaa 9276292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43114923 - 43114993
Alignment:
Q  1 ccaccatttggtgtattgtacgca-cccttaccctatttt--tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| | | |||||||||| ||||  ||||||||||| |||||||||||||||||    
T  43114923 ccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtttccaggacttgaa 43114993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 516505 - 516443
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||| |||||| |||| ||||||||| ||||| |||||||||| |||||||||||||||||    
T  516505 tttggtttattgtgcgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 516443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19751680 - 19751614
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttg 66  Q
    |||||| | ||||||||||||||| ||||||| | |||||||||||||||| | |||||||||||||    
T  19751680 ccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggctatttccaggacttg 19751614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29106651 - 29106585
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggacttg 66  Q
    |||| ||||||||||||||||| | ||||| |||| ||||||||||||||||||||| || ||||||    
T  29106651 ccacaatttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttg 29106585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 45139539 - 45139601
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| ||| ||||||||| | |||||||||||||||||||||||  |||||||    
T  45139539 tttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaa 45139601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 9607298 - 9607237
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| |||||| ||||||||| ||||| || ||||||| |||||||||||||||||    
T  9607298 ttggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaa 9607237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15797322 - 15797274
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagagg 50  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  15797322 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagagg 15797274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 21875111 - 21875055
Alignment:
Q  6 atttggtgtattgtacgcacccttaccctattttt--acacaagaggttgtttccag 60  Q
    |||| |||||||||||||| ||||||||| |||||  ||||||||||||||||||||    
T  21875111 atttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccag 21875055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7943092 - 7943024
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| |||||||||||||  ||||||||  |||||| |||||| | |||||||||||||||||    
T  7943092 ccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaa 7943024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 49013537 - 49013589
Alignment:
Q  8 ttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttcca 59  Q
    ||||||||||||||||| |||||||||  ||||||||||||||| ||||||||    
T  49013537 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcca 49013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52428532 - 52428592
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccag 60  Q
    |||| ||||||||||||||||||| ||||||||| | |||||||||||||| || ||||||    
T  52428532 ccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccag 52428592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 1121286 - 1121345
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattt-ttacacaagaggttgtttccaggactt 65  Q
    ||||||||||||||||||  || ||| ||||| |||||||||| ||||||||||||||||    
T  1121286 tttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggactt 1121345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19731104 - 19731038
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttg 66  Q
    |||||| | ||||||||||||||| ||||||| | ||||| |||||||||| | |||||||||||||    
T  19731104 ccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctatttccaggacttg 19731038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34771419 - 34771457
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  34771419 ccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 45786277 - 45786327
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgttt 56  Q
    |||||||||||||||||| |||||||||  ||||||||||||||| |||||    
T  45786277 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30928209 - 30928270
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| ||| || ||||||| | |||| ||||||||||| |||||||||||||||||    
T  30928209 ttggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaa 30928270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 39212081 - 39212024
Alignment:
Q  12 tgtattgtacgcacccttaccctatt-tttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||  |||||| | || ||||||||||||||| |||||||||||||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaa 39212024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 12525489 - 12525445
Alignment:
Q  21 cgcacccttaccct-atttttacacaagaggttgtttccaggact 64  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggact 12525445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 26782464 - 26782400
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||| ||  || | ||||||||||||| ||||||||| ||||||| ||||||||||    
T  26782464 catttggtgtattttatacagcattaccctattttttacacaagagattgtttcaaggacttgaa 26782400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 50625016 - 50625072
Alignment:
Q  9 tggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggact 64  Q
    |||||||||||||||  ||||||||| |||| ||||||||||| |||||| ||||||    
T  50625016 tggtgtattgtacgctaccttacccttttttatacacaagaggctgtttctaggact 50625072  T

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Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13160781 - 13160714
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||    
T  13160781 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttctaggacttgaa 13160714  T

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Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45071344 - 45071277
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||| |||||||    
T  45071344 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagaacttgaa 45071277  T

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Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 18164821 - 18164882
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  18164821 tttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgtttccaggacttgaa 18164882  T

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Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36720876 - 36720808
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||||||||||    
T  36720876 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 36720808  T

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Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44530229 - 44530161
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||||||    
T  44530229 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaa 44530161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12670305 - 12670371
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||    
T  12670305 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaggacttgaa 12670371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 7136591 - 7136652
Alignment:
Q  8 ttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  7136591 ttggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaa 7136652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8897819 - 8897884
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggactt 65  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||    
T  8897819 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 8897884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 31457250 - 31457185
Alignment:
Q  3 accatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| ||||||||||||| ||||  ||||||||||||||||||||||||| |||||||||||    
T  31457250 accatttgatgtattgtacgcagccttttcctatttttacacaagaggttgtttacaggacttgaa 31457185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5135344 - 5135412
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||| || ||||||||| |||| ||||||||||| |||||||||||||||||    
T  5135344 ccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccaggacttgaa 5135412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8483993 - 8484061
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||| ||||||||||||||||| |||| |||| |||| |||||||||||||||||||||||||||||    
T  8483993 ccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggacttgaa 8484061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28817681 - 28817749
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| ||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||    
T  28817681 ccaccattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 28817749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29521740 - 29521808
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||| |||||||| |||||||||||||||||    
T  29521740 ccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaa 29521808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 44781567 - 44781629
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||||    
T  44781567 tttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccaggacttgaa 44781629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12625970 - 12625902
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt--acacaagaggttgtttccaggacttga 67  Q
    |||||||||||||||||||| |||  |||||||| |||||  |||||||||||||||||||||||||||    
T  12625970 ccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttga 12625902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35106004 - 35105935
Alignment:
Q  1 ccaccatt-tggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| |||||||||||||||| |||||| || | ||||||||||||||||||||||||||||||||    
T  35106004 ccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaa 35105935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 389721 - 389655
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctattttt---acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| ||||||||| |||||   |||||||||| |||||||||||||||||    
T  389721 catttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaa 389655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23000274 - 23000338
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggactt 65  Q
    |||||||||||||||||||| | | ||||||| | ||||||||||||||| ||||||||||||||    
T  23000274 ccaccatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactt 23000338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35261759 - 35261691
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||  |||||||||| ||||||    
T  35261759 ccaccatttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaa 35261691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 26954206 - 26954144
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt--acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| |||||  |||||||||| |||||||||||||||||    
T  26954206 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaa 26954144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29877174 - 29877111
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggac 63  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||| ||| ||||||||||||    
T  29877174 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30454152 - 30454218
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||| ||||||| ||||||| | |||| |||||||||| |||||||||||||||||    
T  30454152 ccaccatttggtgtatcgtacgcagccttaccttgtttt-acacaagaggctgtttccaggacttgaa 30454218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 6760895 - 6760834
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||| |||||||||||||||||    
T  6760895 ttggtgtattgtacgaagccttaccctgttttttacacaagaggctgtttccaggacttgaa 6760834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 25250595 - 25250534
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| || |||||||||||| |||||| ||| |||||||||||||||||    
T  25250595 ttggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaa 25250534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 39461058 - 39461119
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||| || |||| ||||||||||| |||||||||||||||||    
T  39461058 ttggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaa 39461119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5689711 - 5689643
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||| | ||| || ||||||||    
T  5689711 ccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctatttacaagacttgaa 5689643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17823656 - 17823588
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||  |||| |||  ||||||||||||||| |||||||||||||||||    
T  17823656 ccaccatttggtgtattttacgcagtcttatcctggtttttacacaagaggctgtttccaggacttgaa 17823588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 20869560 - 20869619
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||| || ||||||||| |||| |||||||||| |||||||||||||||||    
T  20869560 ttggtgtattgtacacagccttaccctgtttt-acacaagaggctgtttccaggacttgaa 20869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 22598236 - 22598169
Alignment:
Q  2 caccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||| ||||||||||||||  | ||||||||| ||||| |||||||||||||||||||||| |||||    
T  22598236 caccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaa 22598169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 2626598 - 2626531
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctattttt----acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||  |||||||| |||||    |||||||||| |||||||||||||||||    
T  2626598 catttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttccaggacttgaa 2626531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24365114 - 24365183
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct--atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||| |||| |||||||||   ||||||||||||||| |||||| ||| ||||||    
T  24365114 ccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttgaa 24365183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 28407470 - 28407428
Alignment:
Q  26 ccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  28407470 ccttaccctgtttttacacaagaggctgtttccaggacttgaa 28407428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 44742580 - 44742642
Alignment:
Q  7 tttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| |||||||||  |||||||||| ||| |||||||||| |||||||    
T  44742580 tttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaa 44742642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 20284133 - 20284196
Alignment:
Q  8 ttggtgtattgtacgcacccttaccc---tatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||   | |||||| |||||||| |||||||||||||||||    
T  20284133 ttggtgtattgtacgcagccttacccttttttttttatacaagaggctgtttccaggacttgaa 20284196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 20869996 - 20869941
Alignment:
Q  8 ttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccagga 62  Q
    ||||||||||||||||| |||||||||  ||||||||||||||  |||||||||||    
T  20869996 ttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 21070761 - 21070825
Alignment:
Q  8 ttggtgtattgtacgcacccttaccc----tatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||    | |||||| |||||||| |||||||||||||||||    
T  21070761 ttggtgtattgtacgcagccttaccctttttttttttatacaagaggctgtttccaggacttgaa 21070825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 30962847 - 30962897
Alignment:
Q  20 acgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaag 69  Q
    ||||| ||| |||||||||| ||||||||||| ||||||||||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaag 30962897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 17250939 - 17251000
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||  ||||| ||| |||| ||||||||||| || ||||||||||||||    
T  17250939 ttggtgtattgtacgctgccttaacctgttttttacacaagaggctgcttccaggacttgaa 17251000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23286380 - 23286428
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagagg 50  Q
    |||||||||||||||||||||||| | |||||||  ||||||||||||||    
T  23286380 ccaccatttggtgtattgtacgcagctttaccct-gttttacacaagagg 23286428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26457809 - 26457773
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatt 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  26457809 ccaccaattggtgtattgtacgcagccttaccctatt 26457773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 28873274 - 28873242
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctatt 37  Q
    |||||||||||||||||||| ||||||||||||    
T  28873274 catttggtgtattgtacgcaaccttaccctatt 28873242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 40604964 - 40605028
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctatttt-tacacaagaggttgtttccaggacttgaa 68  Q
    ||||| |||||||||||||| ||||| || ||||| ||||||| || ||||||||| ||||||||    
T  40604964 catttagtgtattgtacgcaaccttatccaattttttacacaaaagattgtttccatgacttgaa 40605028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1354812 - 1354878
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||    
T  1354812 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaggacttgaa 1354878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1347042 - 1346976
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||| || |||||||||||||||||    
T  1347042 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagtggctgtttccaggacttgaa 1346976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 2166474 - 2166535
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||    
T  2166474 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaa 2166535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 2178107 - 2178168
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||    
T  2178107 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaa 2178168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 29355919 - 29355980
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctattt-ttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||    
T  29355919 ttggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaa 29355980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 9161191 - 9161135
Alignment:
Q  12 tgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||    
T  9161191 tgtattgtacgcagccttactctgtttttacacaagaggctgtttccaggacttgaa 9161135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33138913 - 33138845
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||  |||||| || ||||| | ||||||||||||||||||||||||||    
T  33138913 ccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaa 33138845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32579505 - 32579438
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||| ||||||||||||  |||||| |||||||| || ||||| |||||||||||||||||    
T  32579505 ccaccatttggggtattgtacgcaggcttaccgtatttttataccagaggctgtttccaggacttgaa 32579438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 7947433 - 7947495
Alignment:
Q  7 tttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||| |||||||||  |||||||||| |||||||||||||||| |||||    
T  7947433 tttggtgtattgtacgcagccttaccctggtttttacacaggaggttgtttccaggagttgaa 7947495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1941935 - 1941870
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggactt 65  Q
    |||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||| || |||||    
T  1941935 ccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttacatgactt 1941870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 12221979 - 12222040
Alignment:
Q  8 ttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| |||||||||  ||||||||||||||| |||||||| ||||||||    
T  12221979 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaa 12222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 25557799 - 25557743
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccagga 62  Q
    |||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||    
T  25557799 catttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 26097234 - 26097178
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccagga 62  Q
    |||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||    
T  26097234 catttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13905034 - 13905101
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttga 67  Q
    ||||||||||||| |||||| ||| |||||||||  |||||||||||||||| |||| ||||||||||    
T  13905034 ccaccatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttga 13905101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 28007702 - 28007640
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| ||| ||||| |||| |||||||||| | |||||||||||||||    
T  28007702 catttggtgtattgtacgcagcctgaccctgtttt-acacaagaggctctttccaggacttgaa 28007640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23240879 - 23240943
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttg 66  Q
    |||||| ||||| |||||||||||  |||||||| |||| |||||||||| |||||||||||||||    
T  23240879 ccaccaattggtatattgtacgcaaacttaccctgtttt-acacaagaggctgtttccaggacttg 23240943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3815132 - 3815200
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttacccta-tttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||||||||  | |||| || ||||||||||| ||  |||||||||||||||||    
T  3815132 ccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaa 3815200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 8409311 - 8409255
Alignment:
Q  13 gtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||| ||||||||| ||||| ||||||||||  ||||||||||||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaa 8409255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18277248 - 18277316
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||  ||||| || ||||||||| |||||||||||||||| |||||||| || |||||    
T  18277248 ccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggctgtttccaagatttgaa 18277316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 22967235 - 22967183
Alignment:
Q  16 ttgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||| ||| ||||| ||||||||||||||||| |||||||||| ||||||||    
T  22967235 ttgtatgcagccttatcctatttttacacaagaagttgtttccatgacttgaa 22967183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 23821158 - 23821210
Alignment:
Q  16 ttgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||| ||| ||||| ||||||||||||||||| |||||||||| ||||||||    
T  23821158 ttgtatgcagccttatcctatttttacacaagaagttgtttccatgacttgaa 23821210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 14553585 - 14553523
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||| ||| || ||||||||||| |||||||||||| | | |||||||||||||||    
T  14553585 tttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaa 14553523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 17432397 - 17432352
Alignment:
Q  24 acccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||    
T  17432397 acccttaccctgttttttacacaagatgttgtttccaggacttgaa 17432352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 14975171 - 14975203
Alignment:
Q  36 tttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||| |||||||||||||||||    
T  14975171 tttttacacaagaggctgtttccaggacttgaa 14975203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13079 - 13146
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||| ||||||||||||||| ||||||| | ||||||| ||||||| |||||||||||||||||    
T  13079 ccaccattcggtgtattgtacgcagccttaccttgtttttacgcaagaggctgtttccaggacttgaa 13146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30657 - 30591
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| || |||||| |||| |||||||||| |||||||||||||||||    
T  30657 ccaccatttggtgtattgtacgcagccctaccctgtttt-acacaagaggctgtttccaggacttgaa 30591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 4230 - 4169
Alignment:
Q  8 ttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||    
T  4230 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaa 4169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48689 - 48755
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||  |||||||    
T  48689 ccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtttccaccacttgaa 48755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 1646 - 1708
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||| ||| ||||| ||| |||| |||||||||||||||| |||||||||||    
T  1646 catttggtgtattgtatgcagccttatcctgtttt-acacaagaggttgttttcaggacttgaa 1708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11209 - 11143
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||| ||| ||||||  | |||| |||||||||| |||||||||||||||||    
T  11209 ccaccatttggtgtattgtaagcagccttactttgtttt-acacaagaggctgtttccaggacttgaa 11143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10105 - 10171
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| |||||||||||||||||||  ||||| || |||| |||||||||| |||||||||||||||||    
T  10105 ccactatttggtgtattgtacgcagtcttactctgtttt-acacaagaggctgtttccaggacttgaa 10171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20433 - 20499
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||| |||||||||||||||||||  ||||| || |||| |||||||||| |||||||||||||||||    
T  20433 ccactatttggtgtattgtacgcagtcttactctgtttt-acacaagaggctgtttccaggacttgaa 20499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 59051 - 58989
Alignment:
Q  7 tttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    ||||||||||||||||||  |||||||| ||||| | |||||||| |||||||||||||||||    
T  59051 tttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccaggacttgaa 58989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35072 - 35141
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttt--tacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||   |||||||||  ||||| |||||||||||    
T  35072 ccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaa 35141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10890 - 10834
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccct-atttttacacaagaggttgttt 56  Q
    |||||||||||||||||| ||||| || ||||||  |||||||||||||||||||||    
T  10890 ccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttt 10834  T

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Target: scaffold0867 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3724 - 3790
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctatttttacacaagaggttgtttccaggacttgaa 68  Q
    |||||||||||||||||||||||| | ||||| | | |||||||||| |||||||| ||| |||||||    
T  3724 ccaccatttggtgtattgtacgcaacgttaccttgtatttacacaag-ggttgttttcagaacttgaa 3790  T

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Target: scaffold0954 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 3620 - 3560
Alignment:
Q  5 catttggtgtattgtacgcacccttaccctat-ttttacacaagaggttgtttccaggact 64  Q
    |||| |||||||| |||||| ||||||| ||| |||||||||||||| | |||||||||||    
T  3620 cattcggtgtattatacgcagccttaccttatattttacacaagaggctctttccaggact 3560  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24188 - 24220
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccc 33  Q
    |||||||||||||||||||||||| ||||||||    
T  24188 ccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23679 - 23611
Alignment:
Q  1 ccaccatttggtgtattgtacgcacccttaccctattttt-acacaagaggttgtttccaggacttgaa 68  Q
    |||||||||| |  |||||||||| ||| ||||| ||||| |||||||||||||||| || ||||||||    
T  23679 ccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaa 23611  T

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