View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18587_low_26 (Length: 251)
Name: NF18587_low_26
Description: NF18587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18587_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 23 - 234
Target Start/End: Complemental strand, 52954762 - 52954551
Alignment:
| Q |
23 |
gaagattgattgattgattaactaacgtaaatcaaatcaaatcttgataataatgattggaagaaacgaaagatcaaaactttcttagtgagatggggaa |
122 |
Q |
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| T |
52954762 |
gaagattgattgattgattaactaacgtaaatcaaatcaaatcttgataataatgattggaagaaacgaaagatcaaaactttcttagtgagatggggaa |
52954663 |
T |
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| Q |
123 |
taatgataactattaaaactgaattgaattaaatttctggtttgggaagaaaaagatcaaaactttgtttgttggtgtttgggattatgaatgccacaaa |
222 |
Q |
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| T |
52954662 |
taatgataactattaaaactgaattgaattaaatttctggtttgggaagaaaaagatcaaaactttgtttgttggtgtttgggattatgaatgccacaaa |
52954563 |
T |
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| Q |
223 |
acgatttgtgat |
234 |
Q |
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| T |
52954562 |
acgatttgtgat |
52954551 |
T |
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