View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18587_low_28 (Length: 237)
Name: NF18587_low_28
Description: NF18587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18587_low_28 |
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Alignment Details
Target: chr5 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 34747333 - 34747510
Alignment:
| Q |
1 |
ttcaatttgacgtgacatgcgataaacaaatatttatcatacacaattgagtttgtattattttctgtttcaacccaattcaaactttaaatttcaccca |
100 |
Q |
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| T |
34747333 |
ttcaatttgacgtgacatgtgataaacaaatatttatcatacacaattgagtttgtattattttctgtttcaacccaattcaaactttaaatttcaccca |
34747432 |
T |
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| Q |
101 |
cgggttaaataaatagaatcaaaataacttgaaaaattcaagtgcacaacattacggtccacatcgacggttttttag |
178 |
Q |
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| T |
34747433 |
cgggttaaataaatagaatcaaaataacttgaaaaattcaagtgcacaacattacggtccacatcgacggttttttag |
34747510 |
T |
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