View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18588_high_30 (Length: 270)
Name: NF18588_high_30
Description: NF18588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18588_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 10 - 261
Target Start/End: Original strand, 21225468 - 21225719
Alignment:
| Q |
10 |
catcatcatcatatgagtggtcagaaccttgctcatcaatgctgattaagttttttgatgcagaagtataaccgttggaagactcgacccagctacttgg |
109 |
Q |
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| T |
21225468 |
catcatcatcatatgagtggtcagaaccttgctcatcaatgctgattaagttttttgatgcagaagcataaccgttggaagactcgacccagctacttgg |
21225567 |
T |
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| Q |
110 |
tccagatttgtcaatcacaggcggataatatatattatcaaagtcttcctgaaaatggtttcaagcaaaatttagtcattgttaatattgaagatgatga |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
21225568 |
tccagatttgtcaatcacaggcggataatatatattatcaaagtcttcctgaaaatggtttcaagcaaaatttagtcattgttaatattgaagaggatga |
21225667 |
T |
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| Q |
210 |
catcaatcaggtgcaagaaaaaagtcttattcacaaaccatagtttgatgat |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21225668 |
catcaatcaggtgcaagaaaaaagtcttattcacaaaccatagtttgatgat |
21225719 |
T |
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