View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18588_low_42 (Length: 260)

Name: NF18588_low_42
Description: NF18588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18588_low_42
NF18588_low_42
[»] chr6 (46 HSPs)
chr6 (1-210)||(12730449-12730655)
chr6 (1-206)||(11108847-11109049)
chr6 (1-204)||(24119492-24119693)
chr6 (12-210)||(33274226-33274422)
chr6 (1-203)||(31175678-31175878)
chr6 (9-210)||(33265080-33265279)
chr6 (48-203)||(32591597-32591750)
chr6 (1-88)||(19621321-19621408)
chr6 (7-202)||(929325-929517)
chr6 (11-211)||(378362-378558)
chr6 (1-92)||(9951995-9952086)
chr6 (3-83)||(8160717-8160797)
chr6 (10-82)||(24897211-24897283)
chr6 (52-205)||(14168575-14168726)
chr6 (1-61)||(33129542-33129602)
chr6 (138-205)||(4037037-4037104)
chr6 (48-204)||(32591765-32591916)
chr6 (48-92)||(19621397-19621441)
chr6 (138-210)||(28960222-28960293)
chr6 (48-91)||(9952075-9952118)
chr6 (97-202)||(23350122-23350231)
chr6 (48-202)||(12730309-12730460)
chr6 (48-92)||(24119682-24119726)
chr6 (48-92)||(32727578-32727622)
chr6 (48-92)||(33129509-33129553)
chr6 (48-83)||(31175654-31175689)
chr6 (1-39)||(584468-584506)
chr6 (1-47)||(32727543-32727589)
chr6 (48-89)||(11108817-11108858)
chr6 (48-83)||(584444-584479)
chr6 (138-205)||(11307323-11307390)
chr6 (101-198)||(28771968-28772069)
chr6 (129-206)||(2100618-2100696)
chr6 (131-208)||(11322264-11322342)
chr6 (131-204)||(11746218-11746292)
chr6 (131-208)||(20080338-20080416)
chr6 (131-207)||(3185396-3185473)
chr6 (132-204)||(6324202-6324275)
chr6 (156-205)||(14168983-14169032)
chr6 (131-207)||(15273218-15273295)
chr6 (131-207)||(26479190-26479267)
chr6 (48-92)||(929286-929330)
chr6 (131-206)||(5606294-5606370)
chr6 (138-206)||(23349759-23349826)
chr6 (156-204)||(24418486-24418534)
chr6 (131-206)||(26716610-26716686)
[»] chr2 (62 HSPs)
chr2 (1-206)||(31025873-31026076)
chr2 (6-202)||(12542141-12542335)
chr2 (1-204)||(34470029-34470230)
chr2 (1-205)||(32661403-32661605)
chr2 (4-202)||(35172928-35173124)
chr2 (8-201)||(28451825-28452016)
chr2 (1-210)||(37343646-37343853)
chr2 (1-205)||(36286122-36286324)
chr2 (1-91)||(3368815-3368905)
chr2 (30-206)||(10741220-10741393)
chr2 (1-206)||(10857477-10857679)
chr2 (1-205)||(40938793-40938991)
chr2 (32-206)||(28217016-28217188)
chr2 (48-204)||(10857339-10857488)
chr2 (21-201)||(34922227-34922404)
chr2 (4-204)||(35180401-35180598)
chr2 (1-92)||(37551855-37551946)
chr2 (1-205)||(39374243-39374444)
chr2 (1-206)||(44245082-44245284)
chr2 (48-204)||(32661594-32661748)
chr2 (22-206)||(41454510-41454690)
chr2 (11-96)||(10788504-10788589)
chr2 (7-203)||(30504384-30504578)
chr2 (1-78)||(38396635-38396712)
chr2 (49-205)||(41454702-41454856)
chr2 (1-204)||(20480077-20480273)
chr2 (52-205)||(36286317-36286468)
chr2 (48-205)||(37343842-37343997)
chr2 (48-210)||(19889377-19889537)
chr2 (130-205)||(2755188-2755264)
chr2 (30-202)||(19885861-19886029)
chr2 (138-207)||(12542404-12542473)
chr2 (138-211)||(37334598-37334670)
chr2 (48-93)||(40938980-40939025)
chr2 (38-207)||(34600544-34600711)
chr2 (48-92)||(37551822-37551866)
chr2 (138-204)||(34601005-34601071)
chr2 (138-207)||(11188303-11188372)
chr2 (1-46)||(31974849-31974894)
chr2 (26-122)||(42274661-42274751)
chr2 (48-92)||(12542329-12542373)
chr2 (50-92)||(10741181-10741223)
chr2 (131-212)||(40324626-40324708)
chr2 (48-93)||(3368781-3368826)
chr2 (138-210)||(52287-52359)
chr2 (138-206)||(21024708-21024776)
chr2 (138-206)||(23280878-23280946)
chr2 (138-205)||(3339133-3339200)
chr2 (48-83)||(31974883-31974918)
chr2 (138-205)||(39374099-39374166)
chr2 (138-208)||(4094806-4094876)
chr2 (131-204)||(22699456-22699530)
chr2 (48-203)||(31026065-31026218)
chr2 (48-78)||(44245063-44245093)
chr2 (138-203)||(28451640-28451704)
chr2 (131-207)||(33004706-33004783)
chr2 (154-206)||(3368670-3368722)
chr2 (138-206)||(15023208-15023276)
chr2 (131-210)||(21552535-21552615)
chr2 (131-206)||(24895150-24895226)
chr2 (131-206)||(25429920-25429996)
chr2 (138-206)||(28733231-28733299)
[»] chr7 (70 HSPs)
chr7 (10-202)||(20588276-20588466)
chr7 (1-206)||(41446116-41446318)
chr7 (8-211)||(18201503-18201704)
chr7 (1-204)||(36801570-36801771)
chr7 (1-92)||(21948933-21949024)
chr7 (7-198)||(40348160-40348348)
chr7 (9-202)||(29673571-29673761)
chr7 (1-207)||(47350795-47350999)
chr7 (1-204)||(17802024-17802220)
chr7 (1-82)||(38974553-38974634)
chr7 (3-205)||(40139672-40139875)
chr7 (1-214)||(48925901-48926111)
chr7 (48-207)||(41445970-41446127)
chr7 (1-72)||(22165067-22165138)
chr7 (1-72)||(22223774-22223845)
chr7 (1-71)||(44434328-44434398)
chr7 (48-201)||(38974413-38974564)
chr7 (50-204)||(8409232-8409385)
chr7 (48-212)||(36801760-36801922)
chr7 (1-204)||(17167992-17168189)
chr7 (48-201)||(21202762-21202912)
chr7 (48-93)||(41930811-41930856)
chr7 (71-204)||(8409093-8409225)
chr7 (52-205)||(33159483-33159633)
chr7 (48-204)||(44434186-44434339)
chr7 (138-222)||(29163083-29163166)
chr7 (131-207)||(36204423-36204498)
chr7 (138-202)||(45480076-45480140)
chr7 (101-206)||(40790877-40790985)
chr7 (50-205)||(17167854-17168001)
chr7 (10-71)||(44434419-44434479)
chr7 (48-93)||(47350988-47351033)
chr7 (30-121)||(10555678-10555763)
chr7 (138-206)||(37991413-37991481)
chr7 (48-92)||(43724727-43724771)
chr7 (101-204)||(11742864-11742971)
chr7 (101-205)||(30503705-30503814)
chr7 (101-205)||(18201353-18201461)
chr7 (131-207)||(19233337-19233414)
chr7 (1-46)||(21202728-21202773)
chr7 (101-208)||(31529970-31530081)
chr7 (138-207)||(37858300-37858368)
chr7 (101-206)||(47258961-47259069)
chr7 (48-92)||(7271546-7271589)
chr7 (48-92)||(21948900-21948944)
chr7 (38-90)||(32043618-32043670)
chr7 (138-206)||(45259951-45260019)
chr7 (48-92)||(48926100-48926144)
chr7 (101-202)||(11742712-11742817)
chr7 (21-92)||(28350226-28350297)
chr7 (138-205)||(29163296-29163363)
chr7 (131-213)||(30757215-30757298)
chr7 (138-205)||(39142437-39142504)
chr7 (138-205)||(40139528-40139595)
chr7 (138-209)||(45863018-45863088)
chr7 (101-206)||(45863177-45863285)
chr7 (131-204)||(30699263-30699337)
chr7 (131-208)||(37996013-37996091)
chr7 (131-207)||(930947-931024)
chr7 (138-207)||(1449980-1450049)
chr7 (26-79)||(10573441-10573494)
chr7 (152-205)||(21954336-21954389)
chr7 (131-207)||(37452288-37452365)
chr7 (131-206)||(18852732-18852808)
chr7 (138-206)||(22164924-22164992)
chr7 (138-206)||(22223631-22223699)
chr7 (131-206)||(25986923-25986999)
chr7 (131-206)||(35121411-35121487)
chr7 (131-206)||(35121652-35121728)
chr7 (138-206)||(47259305-47259372)
[»] chr5 (45 HSPs)
chr5 (1-201)||(4146110-4146308)
chr5 (1-204)||(12610386-12610587)
chr5 (10-246)||(8714073-8714308)
chr5 (1-206)||(10331954-10332157)
chr5 (1-91)||(8006093-8006183)
chr5 (52-208)||(37887668-37887822)
chr5 (1-82)||(12881788-12881869)
chr5 (1-208)||(15204143-15204347)
chr5 (48-205)||(12610243-12610397)
chr5 (1-92)||(16039579-16039670)
chr5 (101-214)||(25693891-25694007)
chr5 (10-203)||(39573646-39573838)
chr5 (48-204)||(4146297-4146451)
chr5 (38-202)||(16822785-16822948)
chr5 (48-201)||(8360878-8361029)
chr5 (48-201)||(8006172-8006323)
chr5 (48-206)||(16039659-16039816)
chr5 (157-205)||(17235135-17235183)
chr5 (51-90)||(12881861-12881900)
chr5 (138-204)||(6815500-6815566)
chr5 (131-206)||(13960929-13961005)
chr5 (138-206)||(15204001-15204069)
chr5 (131-206)||(20974648-20974724)
chr5 (138-205)||(6815677-6815743)
chr5 (138-201)||(10169018-10169081)
chr5 (48-83)||(10332146-10332181)
chr5 (48-83)||(33759379-33759414)
chr5 (101-206)||(39049015-39049124)
chr5 (138-205)||(41083337-41083404)
chr5 (97-210)||(41138555-41138672)
chr5 (164-206)||(931845-931887)
chr5 (131-216)||(11480024-11480110)
chr5 (152-206)||(17235266-17235320)
chr5 (152-202)||(20040972-20041021)
chr5 (131-211)||(34734312-34734393)
chr5 (131-211)||(43586025-43586106)
chr5 (131-206)||(1055369-1055445)
chr5 (131-206)||(3020833-3020909)
chr5 (131-210)||(3223523-3223603)
chr5 (49-93)||(18403095-18403139)
chr5 (131-206)||(22052437-22052513)
chr5 (130-205)||(23263144-23263220)
chr5 (131-206)||(25631084-25631160)
chr5 (164-208)||(31456134-31456178)
chr5 (138-202)||(43222938-43223002)
[»] chr8 (54 HSPs)
chr8 (3-206)||(32498376-32498576)
chr8 (1-204)||(23623421-23623622)
chr8 (1-92)||(8038140-8038231)
chr8 (1-89)||(5548003-5548091)
chr8 (1-182)||(34608370-34608551)
chr8 (1-83)||(17074876-17074958)
chr8 (1-83)||(17573312-17573394)
chr8 (1-204)||(27300630-27300831)
chr8 (1-122)||(32164978-32165093)
chr8 (1-82)||(13229463-13229544)
chr8 (1-214)||(15589625-15589836)
chr8 (48-207)||(31947851-31948007)
chr8 (11-205)||(44807205-44807389)
chr8 (30-205)||(36623904-36624076)
chr8 (4-167)||(41368388-41368549)
chr8 (9-205)||(40021640-40021828)
chr8 (4-213)||(7477328-7477534)
chr8 (48-206)||(7658600-7658756)
chr8 (1-46)||(7658745-7658790)
chr8 (48-206)||(23623611-23623767)
chr8 (99-206)||(26919920-26920031)
chr8 (131-211)||(33947037-33947118)
chr8 (48-213)||(41368541-41368704)
chr8 (50-205)||(36624073-36624224)
chr8 (52-93)||(8038224-8038265)
chr8 (1-50)||(23389799-23389848)
chr8 (49-206)||(18621719-18621874)
chr8 (48-92)||(32498567-32498611)
chr8 (46-93)||(13229429-13229476)
chr8 (48-83)||(34608540-34608575)
chr8 (131-212)||(6335567-6335649)
chr8 (50-92)||(42260252-42260294)
chr8 (1-46)||(31947996-31948041)
chr8 (101-207)||(38701868-38701975)
chr8 (131-210)||(37639501-37639581)
chr8 (48-92)||(42260322-42260366)
chr8 (49-92)||(16982772-16982815)
chr8 (131-209)||(39616790-39616869)
chr8 (131-212)||(414894-414976)
chr8 (48-82)||(5547980-5548014)
chr8 (138-204)||(9878359-9878424)
chr8 (48-90)||(32164947-32164989)
chr8 (131-208)||(42906613-42906691)
chr8 (46-83)||(23389835-23389872)
chr8 (131-207)||(41015030-41015107)
chr8 (131-210)||(994987-995067)
chr8 (131-206)||(6014417-6014493)
chr8 (164-212)||(6107109-6107157)
chr8 (10-83)||(20504553-20504630)
chr8 (131-210)||(27339537-27339617)
chr8 (131-206)||(34608618-34608693)
chr8 (131-206)||(37953372-37953448)
chr8 (131-206)||(42267454-42267530)
chr8 (131-206)||(45106433-45106509)
[»] chr1 (64 HSPs)
chr1 (1-205)||(1712369-1712571)
chr1 (1-204)||(21931900-21932101)
chr1 (1-205)||(16149858-16150059)
chr1 (4-203)||(51195795-51195991)
chr1 (1-205)||(15911671-15911873)
chr1 (1-204)||(22182528-22182727)
chr1 (3-201)||(37696252-37696447)
chr1 (1-93)||(52201507-52201599)
chr1 (1-92)||(16318777-16318868)
chr1 (21-204)||(26063921-26064102)
chr1 (1-205)||(26932582-26932784)
chr1 (1-207)||(29153337-29153541)
chr1 (1-91)||(36196960-36197050)
chr1 (1-92)||(7159648-7159739)
chr1 (38-207)||(6912329-6912497)
chr1 (1-206)||(19968396-19968598)
chr1 (48-205)||(52201365-52201518)
chr1 (12-88)||(52254644-52254720)
chr1 (10-206)||(13344297-13344491)
chr1 (4-83)||(24183173-24183252)
chr1 (30-213)||(28731341-28731520)
chr1 (9-207)||(19893025-19893221)
chr1 (1-206)||(35544743-35544944)
chr1 (101-205)||(6606535-6606642)
chr1 (30-92)||(41003684-41003746)
chr1 (50-204)||(15911864-15912016)
chr1 (48-201)||(26932773-26932923)
chr1 (48-202)||(29153196-29153348)
chr1 (48-204)||(46039040-46039195)
chr1 (55-204)||(52254490-52254637)
chr1 (69-205)||(35580737-35580871)
chr1 (30-92)||(48826242-48826304)
chr1 (96-206)||(35580870-35580984)
chr1 (48-207)||(37696438-37696595)
chr1 (46-91)||(16149826-16149871)
chr1 (138-206)||(26811451-26811519)
chr1 (138-206)||(46038898-46038966)
chr1 (48-83)||(16318857-16318892)
chr1 (152-206)||(7764442-7764496)
chr1 (48-82)||(22182505-22182539)
chr1 (131-214)||(6809058-6809142)
chr1 (131-206)||(20224315-20224391)
chr1 (138-206)||(21697121-21697188)
chr1 (48-92)||(21931867-21931911)
chr1 (48-92)||(35544933-35544977)
chr1 (151-207)||(46351483-46351539)
chr1 (127-206)||(51462179-51462258)
chr1 (138-201)||(6606947-6607010)
chr1 (138-201)||(41611244-41611307)
chr1 (7-46)||(46039006-46039045)
chr1 (101-206)||(50503699-50503808)
chr1 (131-212)||(8028952-8029034)
chr1 (48-82)||(48332878-48332912)
chr1 (55-92)||(19968363-19968400)
chr1 (131-207)||(45884945-45885022)
chr1 (153-206)||(50591555-50591608)
chr1 (138-206)||(5225222-5225290)
chr1 (138-210)||(5225599-5225671)
chr1 (131-206)||(22204303-22204379)
chr1 (131-206)||(23341962-23342038)
chr1 (50-82)||(36196937-36196969)
chr1 (131-206)||(43914819-43914895)
chr1 (131-206)||(45664379-45664455)
chr1 (138-210)||(47430088-47430160)
[»] chr4 (89 HSPs)
chr4 (30-204)||(9592272-9592444)
chr4 (1-206)||(50073408-50073611)
chr4 (3-201)||(19725736-19725933)
chr4 (1-204)||(36413679-36413880)
chr4 (1-210)||(2016249-2016456)
chr4 (1-204)||(1186801-1187001)
chr4 (1-207)||(9119398-9119602)
chr4 (3-201)||(10725907-10726103)
chr4 (3-201)||(10939676-10939872)
chr4 (4-206)||(23777179-23777379)
chr4 (1-204)||(40919241-40919441)
chr4 (1-204)||(51239985-51240184)
chr4 (1-201)||(22589304-22589502)
chr4 (1-91)||(18961984-18962074)
chr4 (1-92)||(19956802-19956893)
chr4 (1-92)||(40489353-40489444)
chr4 (1-82)||(7472274-7472355)
chr4 (1-206)||(44120899-44121103)
chr4 (1-202)||(45904056-45904255)
chr4 (1-83)||(9695207-9695289)
chr4 (11-92)||(6289303-6289384)
chr4 (1-205)||(26858343-26858545)
chr4 (1-82)||(35022921-35023002)
chr4 (5-92)||(41970075-41970162)
chr4 (48-201)||(18961847-18961995)
chr4 (7-91)||(13209578-13209662)
chr4 (39-205)||(24296651-24296814)
chr4 (48-202)||(50073268-50073419)
chr4 (48-203)||(40489212-40489364)
chr4 (1-208)||(19938298-19938497)
chr4 (138-206)||(12893210-12893278)
chr4 (48-201)||(44120759-44120910)
chr4 (48-211)||(1186651-1186812)
chr4 (10-201)||(34625091-34625279)
chr4 (30-82)||(10308506-10308557)
chr4 (138-205)||(49869252-49869318)
chr4 (138-205)||(55732935-55733002)
chr4 (48-205)||(19938486-19938641)
chr4 (138-204)||(36945513-36945579)
chr4 (1-61)||(24886673-24886731)
chr4 (48-89)||(36413869-36413910)
chr4 (48-201)||(40919430-40919580)
chr4 (55-201)||(47096591-47096734)
chr4 (138-203)||(47629375-47629439)
chr4 (48-92)||(2016445-2016489)
chr4 (48-92)||(10726094-10726138)
chr4 (48-92)||(10939863-10939907)
chr4 (48-92)||(26858534-26858578)
chr4 (48-90)||(13209541-13209583)
chr4 (138-203)||(12892825-12892890)
chr4 (138-207)||(13306900-13306969)
chr4 (138-203)||(29860653-29860718)
chr4 (101-202)||(29860788-29860892)
chr4 (138-206)||(2016676-2016744)
chr4 (46-82)||(8167941-8167977)
chr4 (48-205)||(9119591-9119747)
chr4 (48-92)||(45904023-45904067)
chr4 (138-206)||(49869666-49869734)
chr4 (138-202)||(51843538-51843602)
chr4 (131-213)||(7644448-7644531)
chr4 (52-83)||(9695183-9695214)
chr4 (131-209)||(18988174-18988253)
chr4 (48-83)||(19956882-19956917)
chr4 (101-214)||(39907290-39907407)
chr4 (138-204)||(3556161-3556227)
chr4 (52-191)||(7472348-7472485)
chr4 (131-204)||(13019273-13019347)
chr4 (131-204)||(17554285-17554359)
chr4 (152-210)||(19725653-19725710)
chr4 (131-208)||(21537116-21537194)
chr4 (131-216)||(39332307-39332393)
chr4 (138-208)||(39906941-39907011)
chr4 (164-209)||(39136293-39136338)
chr4 (38-87)||(49869568-49869617)
chr4 (48-77)||(51240173-51240202)
chr4 (52-206)||(55732566-55732718)
chr4 (131-206)||(232930-233006)
chr4 (49-93)||(2654130-2654174)
chr4 (138-206)||(4049370-4049438)
chr4 (131-206)||(4902395-4902471)
chr4 (1-41)||(8167964-8168004)
chr4 (131-206)||(10046175-10046251)
chr4 (131-206)||(13021218-13021294)
chr4 (131-206)||(14578679-14578755)
chr4 (131-206)||(20472785-20472861)
chr4 (131-206)||(31250708-31250784)
chr4 (131-206)||(34158712-34158788)
chr4 (131-206)||(38371269-38371345)
chr4 (131-190)||(40489480-40489540)
[»] scaffold2010 (1 HSPs)
scaffold2010 (1-205)||(492-694)
[»] chr3 (47 HSPs)
chr3 (1-205)||(53764574-53764775)
chr3 (1-205)||(53568292-53568495)
chr3 (30-206)||(50724889-50725062)
chr3 (30-206)||(50787788-50787961)
chr3 (1-92)||(51187777-51187868)
chr3 (1-205)||(54716619-54716821)
chr3 (7-204)||(45125095-45125289)
chr3 (1-82)||(43001713-43001795)
chr3 (1-204)||(51494516-51494716)
chr3 (26-90)||(7569299-7569363)
chr3 (11-83)||(42996529-42996601)
chr3 (1-203)||(9168971-9169171)
chr3 (48-206)||(54716474-54716630)
chr3 (49-205)||(7569130-7569283)
chr3 (1-91)||(14003952-14004037)
chr3 (50-205)||(43001786-43001939)
chr3 (30-201)||(14770559-14770728)
chr3 (48-93)||(14003918-14003963)
chr3 (138-207)||(46934036-46934105)
chr3 (49-214)||(5049354-5049516)
chr3 (61-208)||(5049520-5049665)
chr3 (6-201)||(47284401-47284602)
chr3 (101-203)||(44702073-44702179)
chr3 (138-206)||(46934235-46934303)
chr3 (52-92)||(51187861-51187901)
chr3 (49-205)||(9169161-9169315)
chr3 (48-89)||(53764764-53764805)
chr3 (138-210)||(50380149-50380221)
chr3 (50-167)||(50724777-50724892)
chr3 (50-167)||(50787958-50788073)
chr3 (154-206)||(51187716-51187768)
chr3 (164-207)||(7857978-7858021)
chr3 (131-213)||(47943699-47943782)
chr3 (101-206)||(54476041-54476150)
chr3 (97-206)||(55228009-55228122)
chr3 (164-206)||(24636348-24636390)
chr3 (132-205)||(32205087-32205161)
chr3 (131-207)||(14004073-14004150)
chr3 (142-206)||(40410125-40410190)
chr3 (131-206)||(12881233-12881309)
chr3 (131-206)||(12881454-12881530)
chr3 (131-206)||(19914474-19914550)
chr3 (131-206)||(21841725-21841801)
chr3 (131-206)||(25126237-25126313)
chr3 (131-206)||(31117618-31117694)
chr3 (131-206)||(32594008-32594084)
chr3 (131-206)||(33252482-33252558)
[»] scaffold0021 (1 HSPs)
scaffold0021 (3-206)||(157270-157472)
[»] scaffold0039 (2 HSPs)
scaffold0039 (3-207)||(55268-55469)
scaffold0039 (48-92)||(55233-55277)
[»] scaffold0236 (3 HSPs)
scaffold0236 (3-206)||(22815-23016)
scaffold0236 (46-93)||(23005-23052)
scaffold0236 (152-204)||(23109-23161)
[»] scaffold0028 (2 HSPs)
scaffold0028 (3-204)||(31979-32178)
scaffold0028 (48-205)||(32169-32324)
[»] scaffold0047 (2 HSPs)
scaffold0047 (22-205)||(63198-63377)
scaffold0047 (48-92)||(63145-63189)
[»] scaffold0019 (1 HSPs)
scaffold0019 (50-205)||(122491-122644)
[»] scaffold0279 (1 HSPs)
scaffold0279 (38-205)||(7065-7229)
[»] scaffold0032 (3 HSPs)
scaffold0032 (48-92)||(47723-47767)
scaffold0032 (1-44)||(47756-47799)
scaffold0032 (152-216)||(47799-47863)
[»] scaffold1301 (1 HSPs)
scaffold1301 (138-205)||(1295-1362)
[»] scaffold0121 (1 HSPs)
scaffold0121 (30-79)||(32645-32694)
[»] scaffold0693 (1 HSPs)
scaffold0693 (131-202)||(4543-4615)
[»] scaffold0014 (1 HSPs)
scaffold0014 (131-206)||(79226-79302)
[»] scaffold0005 (1 HSPs)
scaffold0005 (131-206)||(238620-238696)


Alignment Details
Target: chr6 (Bit Score: 94; Significance: 6e-46; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 12730449 - 12730655
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||       |||     
T  12730449 acgtggcacccacaatggtcgacacgtgacacctcacttacgggatgtgggtgccacgtcagcgaagactaagtcaaaagtggtcttgg-------ggcc 12730541  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||| ||||||||| |||||||     | ||| ||||||| |||||||| |||| || |||||||| |||| ||||||||||||||  ||||||||| ||    
T  12730542 aaaaatgccaaagatccaatacatatggggctgttttgtattttaattagttaggggaccaaaatcgcaacttttgaaaagataggaggccaaaagtgca 12730641  T
Q  197 attaagcctatatt 210  Q
    ||||||||||||||    
T  12730642 attaagcctatatt 12730655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 11108847 - 11109049
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||| || |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||      |||     
T  11108847 acgtggcacccacagtgatcgacacgtggcacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggcattggg------ggcc 11108940  T
Q  101 aaaactgccaaagagccaatac--gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaa 197  Q
    |||||||||||||| |||||||    | ||| ||||||| |||||||| |||  ||| ||||||| |||| |||||||||||| || | ||||||| |||    
T  11108941 aaaactgccaaagatccaatacataggggctgttttgtattttaattagttaaggggtcaaaatcacaacttttgaaaagataaggggtcaaaagtgcaa 11109040  T
Q  198 ttaagccta 206  Q
    |||||||||    
T  11109041 ttaagccta 11109049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 24119693 - 24119492
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||| ||| || || |||||||||||||||||||||||||| |||||      ||||     
T  24119693 acgtggcacccacaatggacgacacgtggcacctcacttaagggatgtggatgtcatgtcagcgaagactaagtcaaaagtggccttgg------aggcc 24119600  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | ||| | ||||||| |||||||| |||| ||||||||||| |||| |||||||| |||||  ||||||||| ||    
T  24119599 aaaactgccaaagatccaatacatagggtgttgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaaaataggaggccaaaagtgca 24119500  T
Q  197 attaagcc 204  Q
    ||||||||    
T  24119499 attaagcc 24119492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 210
Target Start/End: Complemental strand, 33274422 - 33274226
Alignment:
Q  12 acaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaa 111  Q
    ||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||      ||| ||||||| |||    
T  33274422 acaatggtcgacacgtggcacctcacttaagagatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggccaaaactgtcaa 33274329  T
Q  112 agagccaatac----gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    ||| |||||||    ||| ||| ||||||| |||||||| |||| | |||||||||  ||| ||||||||||||||| ||||||||| |||||||||||     
T  33274328 agatccaatacataggag-gctgttttgtattttaattagttagggagccaaaatcaaaacttttgaaaagatagggggccaaaagtgcaattaagcctt 33274230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 31175678 - 31175878
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||| ||||||| ||| |||||||||||||  || |||||||||||||| ||||||||||||||||||||||||| ||      |||     
T  31175678 acgtggcacccacaatagtcgacacgtggcacctcacttaagtaatgtgggtgccacgtcaacgaagactaagtcaaaagtggtcttcgg------ggcc 31175771  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||| ||||||||| |||||||   | |  || ||||||| |||||||| |||||||||||||||| |||| ||||||||||||||| |  |||||| ||    
T  31175772 aaaaatgccaaagatccaatacataggggactgttttgtattttaattagttagagggccaaaatcgcaacttttgaaaagatagggggttaaaagtgca 31175871  T
Q  197 attaagc 203  Q
    |||||||    
T  31175872 attaagc 31175878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 33265279 - 33265080
Alignment:
Q  9 cccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgc 108  Q
    |||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||  |||||      ||| ||||||||    
T  33265279 cccacaatggtcgacacgtgacacttcacttaagagatgtgggtgccacgtcagcaaagactaagtcaaaagtggcattggg------ggccaaaactgc 33265186  T
Q  109 caaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||| |||||||   | | ||| ||||||| |||||||| ||||||| |||||||| |||| |||  |||||||||| ||||||||| ||||||| ||    
T  33265185 caaagatccaatacgtagggggctgttttgtattttaattagttagaggaccaaaatcgcaacttttagaaagatagggggccaaaagtgcaattaaacc 33265086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 32591750 - 32591597
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aat 143  Q
    ||||||||||||||||||||||||||||||||||||  |||||||      | |||||||||||||| |||||||   ||| ||| |||||||||| |||    
T  32591750 tgggtgccacgtcagcgaagactaagtcaaaagtggctttggggg------ccaaaactgccaaagatccaatacatagagggctgttttgtattttaat 32591657  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    || |||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  32591656 taattagggggccaaaatcgcaacttttgaaaagatagggtgccaaaagtgcaattaagc 32591597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19621408 - 19621321
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttg 88  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  19621408 acgtggcacccacaatggtcgacatgtggtacctcacttaagggatgtgggtgccacgtcagcgaagtctaagtcaaaagtggccttg 19621321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 202
Target Start/End: Original strand, 929325 - 929517
Alignment:
Q  7 cacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaact 106  Q
    |||||||||||||||||| ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||  |||||      ||| ||||||    
T  929325 cacccacaatggtcgacacgtggcacctcacttaagggatgtgtgtgccacgtcagcgaagactaagtcaaaagtggcattggg------ggccaaaact 929418  T
Q  107 gccaaagagccaatac-gagtg--cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    |||||||| |||||||  ||||  || ||||||| |||||||| |||| ||| ||||||| |||| ||| |||| |||||| | ||||||| ||||||||    
T  929419 gccaaagatccaatacatagtggactgttttgtattttaattagttag-ggggcaaaatcgcaacttttaaaaatatagggggtcaaaagtgcaattaag 929517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 378362 - 378558
Alignment:
Q  11 cacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgcca 110  Q
    |||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||| ||      |||| |||| || ||    
T  378362 cacaatggtcgacacgtggcacctcacttaagggatgtgggtgtcacgtcagcgaagactaagtcaaaagt-gtctcgg------aggccaaaattgtca 378454  T
Q  111 aagagcca----atacgagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||| |||    ||| ||| ||| ||||||| |||||||| |||| ||||||||||| ||||||||| |||||||||| | ||||||| |||||||||||    
T  378455 aagatccattacataggag-gctgttttgtattttaattagttagggggccaaaatcgcaacatttggaaagataggg-gtcaaaagtgcaattaagcct 378552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9952086 - 9951995
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||||||||| || |||||||||||||| |||||||||| ||||| ||||||||||||||| |||  |||||||    
T  9952086 acgtggcacccacaatggtcgacatgtggcatctcacttaagggatgtgggtgccacatcagcaaagactaagtcaaaaatggcattggggg 9951995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 8160797 - 8160717
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    |||||||||||||||||||||| ||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||    
T  8160797 gtggcacccacaatggtcgacacgtggcacctcacataaggaatgtgcgtgccacgtcagcgaagactaagtcaaaagtgg 8160717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 24897283 - 24897211
Alignment:
Q  10 ccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  24897283 ccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacatcagcgaagactaagtcaaaagtg 24897211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 205
Target Start/End: Complemental strand, 14168726 - 14168575
Alignment:
Q  52 tgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatt 147  Q
    |||||| ||||||||||||||||||||| ||| |||||| |      |||||||| ||||||| |||||||   | | |||||||||||||| ||||| |    
T  14168726 tgccacatcagcgaagactaagtcaaaattggccttgggcg------ctaaaactaccaaagatccaatacatagggggcttttttgtattttaattagt 14168633  T
Q  148 tagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||  ||| ||||||| |||| ||||||||||||| | ||||||||| |||||||||||    
T  14168632 tacggggtcaaaatcgcaacttttgaaaagatagagggccaaaagtgcaattaagcct 14168575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33129542 - 33129602
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtca 61  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||    
T  33129542 acgtggcacccacaatggtcgacaagtggcacctcacttaagagatgtgggtgccacgtca 33129602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 4037104 - 4037037
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| |||| ||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||    
T  4037104 tttaattagttagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 4037037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 32591765 - 32591916
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtgcttttttgta-tttaa 142  Q
    |||||||||||||||||||||||||||||||||||| |||||       ||  |||||||||||||| |||||||    ||| ||| ||||||| |||||    
T  32591765 tgggtgccacgtcagcgaagactaagtcaaaagtggccttgg-------ggtcaaaactgccaaagatccaatacatcggag-gctgttttgtattttaa 32591856  T
Q  143 ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    ||| |||| ||| |||||  ||||| ||||||||||||||| | ||||||| ||||||||||    
T  32591857 ttagttagggggtcaaaa--tcaacttttgaaaagatagggggtcaaaagtgcaattaagcc 32591916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 19621397 - 19621441
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  19621397 tgggtgccacgtcagcgaagactaagtcaaaagtggttttggggg 19621441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 28960293 - 28960222
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||| |||| ||||||||||| |||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  28960293 tttaattagttag-gggccaaaatcgcaacttttggaaagatagggggccaaaagtacaattaagcctttatt 28960222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 9952075 - 9952118
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggg 91  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9952075 tgggtgccacgtcagtgaagactaagtcaaaagtggtcttgggg 9952118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 23350122 - 23350231
Alignment:
Q  97 ggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaag 192  Q
    |||||||||||||||||| |||||||   | | ||| |||||||||| ||||| |||| | ||||||||| |||| |||||||||||| || ||||||||    
T  23350122 ggctaaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagggtgccaaaatcgcaacttttgaaaagataaggggccaaaag 23350221  T
Q  193 tacaattaag 202  Q
    | ||||||||    
T  23350222 tgcaattaag 23350231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 12730460 - 12730309
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    ||||||||||||||||||||||||||||||||||||  |||||      | | ||||||| |||||| |||||||   | | ||| ||||||| ||||||    
T  12730460 tgggtgccacgtcagcgaagactaagtcaaaagtggcattggg------gaccaaaactgtcaaagatccaatacatagggggctgttttgtattttaat 12730367  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    || |||| |||| |||||| |||| |||||||||||| |  ||||||||| ||||||||    
T  12730366 tagttag-gggcaaaaatcacaacttttgaaaagataagaggccaaaagtgcaattaag 12730309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 24119682 - 24119726
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||||||||||||||| | ||||||||    
T  24119682 tgggtgccacgtcagcgaagactaagtcaaaagtagccttggggg 24119726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 32727578 - 32727622
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||| |||| |||||||||||||||||||||||    
T  32727578 tgggtgccacgtcagcaaagattaagtcaaaagtggtcttggggg 32727622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 33129553 - 33129509
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  33129553 tgggtgccacgttagcgaagattaagtcaaaagtggtcttggggg 33129509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 31175689 - 31175654
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  31175689 tgggtgccacgtcagcgaagactaagtcaaaagtgg 31175654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 584468 - 584506
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcactt 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  584468 acgtggcacccacaatggtcgacatgtggcacctcactt 584506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32727589 - 32727543
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggata 47  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  32727589 acgtggcacccacaatgatcgacacgtggcacctcacttaagggata 32727543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 11108858 - 11108817
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgg 89  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  11108858 tgggtgccacgtcagcaaagactaagtcaaaagtggtgttgg 11108817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 584479 - 584444
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||||||||||||||| ||||||||||||||||||    
T  584479 tgggtgccacgtcagcgcagactaagtcaaaagtgg 584444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 11307323 - 11307390
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||||||||  ||| |||| |||||| |||| ||||||||||||||  ||||||||| |||||||||||    
T  11307323 tttaattaactagggggctaaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaagcct 11307390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 28771968 - 28772069
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   ||| ||| |||| ||||| ||||| |||| | ||||||| | |||| ||||||||||||||| ||||||||| ||    
T  28771968 aaaactgccaaagatccaatacatagagggctattttatattttaattagttagggagccaaaaccgcaacgtttgaaaagatagggggccaaaagtgca 28772067  T
Q  197 at 198  Q
    ||    
T  28772068 at 28772069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 2100618 - 2100696
Alignment:
Q  129 ttttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  2100618 ttttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtgcaattaagccta 2100696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 11322264 - 11322342
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctata 208  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||||    
T  11322264 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctata 11322342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 11746218 - 11746292
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||||||| ||| |||| |||||| || | |||| |||||||||||||||  |||||||| ||||||||||    
T  11746218 ttttgtatttaaattagttagggggccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 11746292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 20080338 - 20080416
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctata 208  Q
    |||||||||||| ||| |||| |||||| || | |||| |||  ||||||||||  |||||||||||||||||||||||    
T  20080338 ttttgtatttaaattaattagggggccataaccgcaacttttacaaagataggggtccaaaagtacaattaagcctata 20080416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 3185396 - 3185473
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||||    
T  3185396 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggaccaaaagtgcaattaagcctat 3185473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 6324275 - 6324202
Alignment:
Q  132 tttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    ||||||||| ||||| |||| | ||| ||||  |||| ||||||||||||||| ||||||||| ||||||||||    
T  6324275 tttgtatttcaattagttagggtgccgaaattgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 6324202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 14168983 - 14169032
Alignment:
Q  156 caaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||||||| |||  ||||||||||||||| ||||||||| |||||||||||    
T  14168983 caaaatcgcaaattttgaaaagatagggggccaaaagtgcaattaagcct 14169032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 15273218 - 15273295
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||| ||| |||| |||||| || | |||| |||||||||||||||  |||||||| ||||||| |||||    
T  15273218 ttttgtatttaaattagttagggggccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaaacctat 15273295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 26479267 - 26479190
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||| ||| |||| |||||| |||| |||| |||| ||||||| ||  ||||||||| ||||||||||||    
T  26479267 ttttgtatttaaattagttagggggccataatcgcaacttttggaaagataagggtccaaaagtataattaagcctat 26479190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 929330 - 929286
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||| || |||||||||||||| ||||||||||| ||||||||    
T  929330 tgggtgtcaggtcagcgaagactatgtcaaaagtggccttggggg 929286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 5606370 - 5606294
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  5606370 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagccta 5606294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 23349826 - 23349759
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| ||| ||||||| |||| |||| |||||||||  ||||||||| ||||||||||||    
T  23349826 tttaattagttag-gggtcaaaatcgcaacttttggaaagataggaagccaaaagtgcaattaagccta 23349759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 24418534 - 24418486
Alignment:
Q  156 caaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    ||||||| |||| ||||||||||||||  ||||||||| ||||||||||    
T  24418534 caaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaagcc 24418486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 26716610 - 26716686
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| ||||||||||||    
T  26716610 ttttgtatttaagttagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 26716686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 31026076 - 31025873
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||      |||     
T  31026076 acgtgacacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgttagcgaagactaagtcaaaagtgaccttggg------ggcc 31025983  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||| ||   ||| | | ||||||| |||||||| |||||||||||||||| |||| ||||||||||||||| ||||||||| ||    
T  31025982 aaaactgccaaagatccaaaacatagagggttgttttgtattttaattagttagagggccaaaatcgcaacttttgaaaagatagggggccaaaagtgca 31025883  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  31025882 attaagccta 31025873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 12542335 - 12542141
Alignment:
Q  6 gcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaac 105  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||       || |||||    
T  12542335 gcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------agccaaaac 12542242  T
Q  106 tgccaaagagccaata---cgagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    ||||||||| ||||||    | | ||| ||||||| |||||||| |||| ||||||||||| |||| ||||||||||||||| ||||||||| |||||||    
T  12542241 tgccaaagatccaatatatagggggctgttttgtattttaattagttagggggccaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaa 12542142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 34470230 - 34470029
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| |||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||      |||     
T  34470230 acgtgacacccaaaatggtcgacatgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggca 34470137  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| | |||||   | | |||  |||||| |||||||| |||| |||||||| || |||| ||||||||||||||| ||||||||| ||    
T  34470136 aaaactgccaaagatcgaatacatagggggctactttgtattttaattagttagggggccaaagtcgcaacttttgaaaagatagggggccaaaagtgca 34470037  T
Q  197 attaagcc 204  Q
    ||||||||    
T  34470036 attaagcc 34470029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 32661605 - 32661403
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||| |||||||||||| |||||||||||||| |||| ||||||      |||     
T  32661605 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatgtggatgccacgtcagctaagactaagtcaaatgtggccttggg------ggcc 32661512  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | |  || ||||||| |||||||| |||| ||| ||||||| |||| ||||||||||||||| ||||||||| ||    
T  32661511 aaaactgccaaagatccaatacataggggactgttttgtattttaattagttagggggacaaaatcgcaacttttgaaaagatagggggccaaaagtgca 32661412  T
Q  197 attaagcct 205  Q
    |||||||||    
T  32661411 attaagcct 32661403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 35172928 - 35173124
Alignment:
Q  4 tggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaa 103  Q
    ||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||     || |||    
T  35172928 tggcacccacaatggtcgacacgtggcacttcacttaagtgatatgagtgccacgtcagcgaagactaagtcaaaagtggccttggggg-----gccaaa 35173022  T
Q  104 actgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaatt 199  Q
    ||||||||||| |||||||   | | ||| |||||||||| ||||  |||| ||| ||||||| |||| ||||||||||||||| ||||||||| |||||    
T  35173023 actgccaaagatccaatacatagggggctgttttgtattttaatttgttagggggtcaaaatcgcaacttttgaaaagataggg-gccaaaagtgcaatt 35173121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 28451825 - 28452016
Alignment:
Q  8 acccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactg 107  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||      ||| |||||||    
T  28451825 acccacaatggtcgacacatggcacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtgaccttggg------ggccaaaactg 28451918  T
Q  108 ccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    |||||||  ||||||   | | ||| ||||||| |||||||| |||||||||||||||| |||| ||| ||||||||||   |||||||| |||||||    
T  28451919 ccaaagattcaatacatagggggctgttttgtattttaattagttagagggccaaaatcacaacttttaaaaagataggagaccaaaagtgcaattaa 28452016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 37343853 - 37343646
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||      |||     
T  37343853 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatgtggatgtcacgtcagcgaagactaagtcaaaagtggccttggg------ggcc 37343760  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||| ||||| |||||||   | | ||| ||||||| |||||||| |||| || |||||||| |||| |||||||||||| || | ||||||| ||    
T  37343759 aaaactgctaaagatccaatacatagggggctgttttgtattttaattagttaggggaccaaaatcgcaacttttgaaaagataagggggcaaaagtgca 37343660  T
Q  197 attaagcctatatt 210  Q
    ||||| | ||||||    
T  37343659 attaaccatatatt 37343646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 36286324 - 36286122
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||| ||||| || |||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||      |||     
T  36286324 acgtggcatccacattgatcgatacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggtattggg------ggcc 36286231  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgt-atttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| ||||||  |||||||| |||| ||||||||||| |||| |||||||| |||| | ||||||||| ||    
T  36286230 aaaactgccaaagatccaatacatagggggctgttttgtgttttaattagttagggggccaaaatcgcaacttttgaaaatatagagggccaaaagtgca 36286131  T
Q  197 attaagcct 205  Q
    |||||||||    
T  36286130 attaagcct 36286122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3368815 - 3368905
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggg 91  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  3368815 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatatgggtgccacgtcagcaaagactaagtcaaaagtggccttgggg 3368905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 206
Target Start/End: Original strand, 10741220 - 10741393
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac--gagtg 127  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||      ||| |||||||||||||| |||||||    | |    
T  10741220 cacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggccaaaactgccaaagatccaatacatagggg 10741313  T
Q  128 cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    || ||||||| |||||||| |||| ||| ||||| | |||| ||||||||||||||| ||||||||| ||||||||||||    
T  10741314 ctgttttgtattttaattagttagggggtcaaaaccgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 10741393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 10857477 - 10857679
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||       ||     
T  10857477 acgtggcacccacaatggtcgacacgtggcacctcagttaagggatgtgggtgccacgtcagtgaagactaagtcaaaagtggccttggg------tgcc 10857570  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||||| |||||| |||||||     | ||| ||||||| |||||||| |||| ||||||||||| |||| ||  ||||||||||| ||||||||| ||    
T  10857571 aaaactgtcaaagatccaatacataaggggctgttttgtattttaattagttagggggccaaaatcgcaactttataaaagataggg-gccaaaagtgca 10857669  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  10857670 attaagccta 10857679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 40938991 - 40938793
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| | |||||||||||     ||       |||     
T  40938991 acgtggcacccacaatggtcgacatgtggcacctcacttaagggatgtgggtgccacatcagcgaagattgagtcaaaagtg---acgg-------ggcc 40938902  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtat-ttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| |||||||| ||||||| |||| ||||||||||| |||| ||||||||||||||| | ||||||| ||    
T  40938901 aaaactgccaaagatccaatacatagggggctgttttgtatattaattagttagtgggccaaaatcacaacttttgaaaagatagggggtcaaaagtgca 40938802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 206
Target Start/End: Original strand, 28217016 - 28217188
Alignment:
Q  32 cctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||      ||| |||||||||||| | |||||||    ||| |    
T  28217016 cctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggccaaaactgccaaaaatccaatacatatgag-g 28217108  T
Q  128 cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    || ||||||| |||||||| |||| ||||||||||| |||| |||  |||||||||| |||||||||  |||||||||||    
T  28217109 ctgttttgtattttaattagttagggggccaaaatcgcaacttttagaaagatagggagccaaaagtgtaattaagccta 28217188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 10857488 - 10857339
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatacgagtgcttttttgtattt-aattat 146  Q
    |||||||||||||||||||| ||||||||||||||||||||||||      | |||||||||||||| |||||  | | ||| |||||||||| |||||     
T  10857488 tgggtgccacgtcagcgaagtctaagtcaaaagtggtcttggggg------ccaaaactgccaaagatccaat--gggggctgttttgtattttaattag 10857397  T
Q  147 ttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||| ||||||||||| |||| |||| |||||||||| ||||||||| ||||||||||    
T  10857396 ttagggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 10857339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 34922404 - 34922227
Alignment:
Q  21 gacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaat 120  Q
    |||| ||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||       |||||| ||||||| |||||    
T  34922404 gacacgtggcacctcacttaagggatgtgggtgccacgtcagcaaagactaagtcaaaagtggttttgggggt------caaaacttccaaagatccaat 34922311  T
Q  121 ac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    ||   | | ||| ||||||| |||||||| |||| || |||||||| |||| ||||||||||||||| ||||||||| |||||||    
T  34922310 acatagggagctgttttgtattttaattagttag-ggaccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaa 34922227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 35180401 - 35180598
Alignment:
Q  4 tggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaa 103  Q
    ||||||||||||||||| ||| ||| ||| ||||||||| ||| || ||||||||||||||||||||||||||||||||| |||||      |||| |||    
T  35180401 tggcacccacaatggtcaacacgtggcacttcacttaagtgatgtgagtgccacgtcagcgaagactaagtcaaaagtggccttgg------aggccaaa 35180494  T
Q  104 actgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaatt 199  Q
    ||| ||||| | |||||||   | | ||| ||||||| |||||||  |||| ||||||||||| |||| |||| |||||||||| ||||||||| |||||    
T  35180495 actaccaaatatccaatacatagggggctgttttgtattttaatttgttagggggccaaaatcgcaacttttggaaagataggg-gccaaaagtgcaatt 35180593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37551855 - 37551946
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| || ||| |||||||||||||||||||||||||||||  |||||||    
T  37551855 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgagtgtcacgtcagcgaagactaagtcaaaagtggcattggggg 37551946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 39374243 - 39374444
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||||       ||     
T  39374243 acgtggcatccacaatgatcgacacgtgacacctcaattaagggatgtgggtgccacgtcagc-aagactaagtcaaaagtggtattggg------tgcc 39374335  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||| |||||||| |||||||   | | ||| ||||||| |||||||| |||| ||| ||||||  |||| |||||||| |||||| | ||||||| ||    
T  39374336 aaaacggccaaagatccaatacatagggggctgttttgtattttaattagttagggggtcaaaattgcaacttttgaaaatatagggggtcaaaagtgca 39374435  T
Q  197 attaagcct 205  Q
    |||||||||    
T  39374436 attaagcct 39374444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 44245082 - 44245284
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| || |||| |||||| || |||||||||||||||||||||||||||||||||||| |||||||       |     
T  44245082 acgtggcacccacaatggtcgacacgtggcatctcatttaaggaatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttgggga------cc 44245175  T
Q  101 aaaactgccaaagagccaatac----gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtac 195  Q
    |||||| ||||||| | ||| |    ||| ||| |||||||||| ||||| |||| ||| ||||||| |||  ||||||||||||||| ||||||||| |    
T  44245176 aaaactaccaaagatctaatgcatatgag-gctgttttgtattttaattagttag-gggtcaaaatcgcaatttttgaaaagatagggagccaaaagtgc 44245273  T
Q  196 aattaagccta 206  Q
    |||||||||||    
T  44245274 aattaagccta 44245284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 32661594 - 32661748
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aat 143  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||      | |||||||||||||| |||||||   | | ||| |||||||||| |||    
T  32661594 tgggtgccacgtcagcgaagactaagtcaaaagtggccttggtgg------ccaaaactgccaaagatccaatacatagggggctgttttgtattttaat 32661687  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    || |||| ||||||||||| |||| |||| |||||||||| ||||||||| ||||||||||    
T  32661688 tagttagggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 32661748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 206
Target Start/End: Complemental strand, 41454690 - 41454510
Alignment:
Q  22 acatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaata 121  Q
    ||||||| ||||||||||| || | ||||| ||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||  ||||||    
T  41454690 acatgtggcacctcacttatggaaaatgggcgccacgtcagcgaagactaagtcaaaagtggtcttggg------ggccaaaactgccaaag-tccaata 41454598  T
Q  122 c--gagtg-cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |   || | || ||||||| |||||||| |||| ||| ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||    
T  41454597 cataagggactgttttgtattttaattagttag-ggggcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 41454510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 10788589 - 10788504
Alignment:
Q  11 cacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaa 96  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||||  |||||||||||||||||| |||||| |||||||    
T  10788589 cacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcaatgaagactaagtcaaaagtcgtcttgagggttaa 10788504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 203
Target Start/End: Original strand, 30504384 - 30504578
Alignment:
Q  7 cacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaact 106  Q
    |||||||||||||||||| ||| |||||||||||| | || |||||||||||||||||||||||||||||||||| |  || ||      ||| ||||||    
T  30504384 cacccacaatggtcgacacgtggcacctcacttaaagaatgtgggtgccacgtcagcgaagactaagtcaaaagtagcattcgg------ggccaaaact 30504477  T
Q  107 gccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    |||||||| |||||||   |||   | ||||||| |||||||| |||| ||| ||||||| |||| ||| ||||||||| |  |||||||| ||||||||    
T  30504478 gccaaagatccaatacatagaggattgttttgtattttaattaattagtgggtcaaaatcgcaacttttaaaaagatagaggaccaaaagtgcaattaag 30504577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38396712 - 38396635
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaa 78  Q
    ||||| || |||||||| |||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  38396712 acgtgacatccacaatgatcgacacgtgacacctcacttaaaggatgtgggtgccacgtcagcgaagactaagtcaaa 38396635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 205
Target Start/End: Original strand, 41454702 - 41454856
Alignment:
Q  49 gggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaatt 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||      ||| |||| ||||||||| |||||||   | | | | ||||||| |||||||    
T  41454702 gggtgccacgtcagcgaagacaaagtcaaaagtggtcttggg------ggccaaaattgccaaagatccaatacatagggggttgttttgtattttaatt 41454795  T
Q  145 atttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    | |||  ||||||||||| |||| ||||||||||||||| |||||| || |||||||||||    
T  41454796 agttaaggggccaaaatcgcaacttttgaaaagatagggggccaaacgtgcaattaagcct 41454856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 20480273 - 20480077
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||||||| || ||     |||||| |||||||||||||||||||| |||||      |||     
T  20480273 acgtgacacccacaatggtcgacacgtggcacctcatttaagggatgtgagt----tgtcagcaaagactaagtcaaaagtggttttggg------ggcc 20480184  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtatttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaa 197  Q
    |||||| |||||||  ||||||   | | ||| |||||| |||||||| |||| ||||||||||  |||| ||| |||| |||||| ||||||||| |||    
T  20480183 aaaactaccaaagattcaatacatagggggctgttttgtttttaattagttagggggccaaaattgcaacttttaaaaatatagggggccaaaagtgcaa 20480084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 205
Target Start/End: Original strand, 36286317 - 36286468
Alignment:
Q  52 tgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatt 147  Q
    |||||||||||||||||||||||||||||||| | ||||||      | ||||| | |||||| |||||||   | | ||| |||||||||| ||||| |    
T  36286317 tgccacgtcagcgaagactaagtcaaaagtggccgtggggg------ccaaaaccgtcaaagatccaatacatagggggctgttttgtattttaattagt 36286410  T
Q  148 tagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||| ||||||||||| |||| |||| |||||||||| ||||||||| |||||||||||    
T  36286411 tagggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 36286468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 37343842 - 37343997
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aat 143  Q
    ||||||||||||||||||||||||||||||||||||  |||||      ||| |||||||||||||| |||||||   | | | | |||||||||| |||    
T  37343842 tgggtgccacgtcagcgaagactaagtcaaaagtggcattggg------ggccaaaactgccaaagatccaatacatagggggttgttttgtatttaaat 37343935  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    || |||| | | ||||||| |||| ||||||||||||||  ||||||||| |||||||||||    
T  37343936 tagttagggagtcaaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaagcct 37343997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 210
Target Start/End: Original strand, 19889377 - 19889537
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aat 143  Q
    |||||||||||| ||| ||||||||||||||||||  ||||||||      | |||||||||||||| |||||||   | | | | |||||||||| |||    
T  19889377 tgggtgccacgttagcaaagactaagtcaaaagtgaccttggggg------ccaaaactgccaaagatccaatacatagggggttgttttgtattttaat 19889470  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    || ||||  |||||||||| |||| |||||||||||| || ||||||||| ||||||||||| ||||    
T  19889471 tagttaggaggccaaaatcgcaacttttgaaaagatatggggccaaaagtgcaattaagcctttatt 19889537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 2755188 - 2755264
Alignment:
Q  130 tttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||||||||||| ||||| |||| ||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||    
T  2755188 tttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 2755264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 19886029 - 19885861
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagt 126  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||||||  ||| ||      ||| |||||||||||| |  ||||||   | |     
T  19886029 cacctcacttatggggtgtgggtgccacgtcagcgaagactaagtcaaaagtgaccttcgg------ggccaaaactgccaaa-atgcaatacatagggg 19885937  T
Q  127 gcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    ||| ||||||| |||||||  |||| ||||||||||| |||| ||||||||||||||| ||||||||| ||||||||    
T  19885936 gctgttttgtattttaattgattagggggccaaaatcgcaacttttgaaaagataggg-gccaaaagtgcaattaag 19885861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 12542404 - 12542473
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||| |||| ||||||||||| |||| ||||||||||||| | ||||||||| |||||||||||||    
T  12542404 tttaattagttagggggccaaaatcgcaacttttgaaaagatagagggccaaaagtgcaattaagcctat 12542473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 37334670 - 37334598
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatta 211  Q
    |||||||| ||| |||| ||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  37334670 tttaattagttatagggtcaaaatcgcaacttttgaaaagataggg-gccaaaagtgcaattaagcctatatta 37334598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 40938980 - 40939025
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  40938980 tgggtgccacgtcagcgaagactaagtcaaaagtggtctcgggggt 40939025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 207
Target Start/End: Complemental strand, 34600711 - 34600544
Alignment:
Q  38 ttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatacga---gtgctttttt 134  Q
    ||||| ||| ||||||||||||||| |||||| ||||||||| ||| ||||||||      | |||||||||||||| |||||||     | ||| ||||    
T  34600711 ttaagtgatgtgggtgccacgtcagtgaagaccaagtcaaaattggccttggggg------ccaaaactgccaaagatccaatacataaggggctgtttt 34600618  T
Q  135 gtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||| ||||  |||  | ||||||||| |||| |||| |||||||||| ||||||||| |||||||||||||    
T  34600617 gtattttaattggttaaggcgccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcctat 34600544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 37551866 - 37551822
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  37551866 tgggtgccacgtcagcgaatactaagtcaaaagtggtcttggggg 37551822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 34601005 - 34601071
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||| |||| |||||||||||  ||| ||| |||| |||||||||||||||||||||||||||    
T  34601005 tttaattagttagggggccaaaatcaaaacttttaaaaaaatagggtgccaaaagtacaattaagcc 34601071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 11188372 - 11188303
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||| |||| ||||||||||| |||| ||||||||||||||| | ||||||| |||||||| ||||    
T  11188372 tttaattagttagggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaaggctat 11188303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31974894 - 31974849
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggat 46  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  31974894 acgtggcacccacaatggtcgacatgtagcacctcacttaagggat 31974849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 42274661 - 42274751
Alignment:
Q  26 gtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac 122  Q
    ||||||||||||||||| ||| ||||||| | |||||||||||| ||||||||| ||| |||||      |||| |||||||||||||| |||||||    
T  42274661 gtgacacctcacttaagtgatgtgggtgctaagtcagcgaagaccaagtcaaaattggccttgg------aggccaaaactgccaaagatccaatac 42274751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 12542329 - 12542373
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||| | |||||||||||||||||||||||||||||||||||    
T  12542329 tgggtgctatgtcagcgaagactaagtcaaaagtggtcttggggg 12542373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 10741223 - 10741181
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  10741223 ggtgccacgtcagcgaagactaagtcaaaagtggctttggggg 10741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 40324708 - 40324626
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattat 212  Q
    |||||||||||| ||| |||| || ||| |||| |||| |||||||||||||||  |||||||| ||||||||||||| ||||    
T  40324708 ttttgtatttaaattagttaggggtccataatcgcaacttttgaaaagatagggatccaaaagtgcaattaagcctattttat 40324626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 3368826 - 3368781
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||    
T  3368826 tgggtgccacgtcagcgaaggctaagtcaaaagtgaccttgggggt 3368781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 52287 - 52359
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||| |||| ||||||||||| |||  | | |||| |||||| ||||||||| ||||||||||||||||    
T  52287 tttaattagttagggggccaaaatcgcaaattcttaaaacatagggggccaaaagtgcaattaagcctatatt 52359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 21024708 - 21024776
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| |  |||||||| |||| ||||||||||||||| | ||||||| ||||||||||||    
T  21024708 tttaattagttagggtaccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagccta 21024776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 23280878 - 23280946
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| ||||||||||| |||| |||  |||||||||| | ||||||| ||||||||||||    
T  23280878 tttaattagttagggggccaaaatcgcaacttttagaaagatagggggacaaaagtgcaattaagccta 23280946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 3339133 - 3339200
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| |||  |||||||||||  ||  ||||||||||||||| ||||||||| |||||||||||    
T  3339133 tttaattagttaaggggccaaaatcgtaatttttgaaaagatagggggccaaaagtgcaattaagcct 3339200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 31974883 - 31974918
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31974883 tgggtgccacgtcagcgaagattaagtcaaaagtgg 31974918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 39374166 - 39374099
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| |||| ||  ||||||| |||| ||||||||||||| | ||||||||| |||||||||||    
T  39374166 tttaattagttaggggatcaaaatcgcaacttttgaaaagatagagggccaaaagtgcaattaagcct 39374099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 4094806 - 4094876
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctata 208  Q
    |||||||| |||| ||  ||||||| |||| ||||||||||||||| || |||||| |||||||| |||||    
T  4094806 tttaattaattaggggatcaaaatcgcaacttttgaaaagatagggggcaaaaagtgcaattaagtctata 4094876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 22699530 - 22699456
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||||||||||||||    
T  22699530 ttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtacaattaagcc 22699456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 203
Target Start/End: Original strand, 31026065 - 31026218
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    |||||| ||||||||| |||||||||||||||| || |||||||||       |||||||||||| | |||||||   |   ||| ||||||| ||||||    
T  31026065 tgggtgtcacgtcagcaaagactaagtcaaaagcggccttgggggt------caaaactgccaaatatccaatacataggaagctgttttgtattttaat 31026158  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    || |||| | ||||||||| |||| |||||||||||||   |||||||||  ||||||||    
T  31026159 tagttagtgagccaaaatcgcaacttttgaaaagatagaaggccaaaagtgtaattaagc 31026218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 78
Target Start/End: Complemental strand, 44245093 - 44245063
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaa 78  Q
    |||||||||||||||||||||||||||||||    
T  44245093 tgggtgccacgtcagcgaagactaagtcaaa 44245063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 28451704 - 28451640
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    |||||||| |||| ||||||||||| |||| |||  |||||||||| ||||||||| |||||||||    
T  28451704 tttaattagttag-gggccaaaatcgcaacttttagaaagatagggggccaaaagtgcaattaagc 28451640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 33004783 - 33004706
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||| ||| ||||||| ||| ||   |||| |||||||||||||||  |||||||| |||||||||||||    
T  33004783 ttttgtatttaaattagttagaggtccataactgcaacttttgaaaagataggggtccaaaagtgcaattaagcctat 33004706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 3368722 - 3368670
Alignment:
Q  154 gccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    ||||||||| |||| |||  |||||||||| ||||||||| ||||||||||||    
T  3368722 gccaaaatcgcaacttttataaagatagggggccaaaagtgcaattaagccta 3368670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 15023276 - 15023208
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| | || |||||| |||| ||| ||||||||| | ||||||||| ||||||||||||    
T  15023276 tttaattagttagggagctaaaatcgcaacttttaaaaagatagagggccaaaagtgcaattaagccta 15023208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 21552615 - 21552535
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||| |||||    
T  21552615 ttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtgcaattaagccaatatt 21552535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 24895150 - 24895226
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  24895150 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 24895226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 25429996 - 25429920
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| ||||||||||||    
T  25429996 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 25429920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 28733231 - 28733299
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||  ||||||||||| |||| ||| |||| ||||||  |||||| ||||||||||||||    
T  28733231 tttaattagttaaggggccaaaatcgcaactttttaaaacataggggaccaaaaatacaattaagccta 28733299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 9e-45; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 20588276 - 20588466
Alignment:
Q  10 ccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgcc 109  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||      |||||||||||||    
T  20588276 ccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggctaaaactgcc 20588369  T
Q  110 aaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    ||||| |||||||   | | ||| ||||||| |||||||| |||| ||||||||||| |||| ||||||||||||| | ||||||||| ||||||||    
T  20588370 aaagatccaatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagagggccaaaagtgcaattaag 20588466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 41446116 - 41446318
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||     
T  41446116 acgtggtacccacaatggtcgacacgtggcacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggg------ggcc 41446209  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | |  || ||||||| |||||||| |||| ||||||||||| || | ||| |||| |||||| ||||||||| ||    
T  41446210 aaaactgccaaagatccaatacataggggactattttgtattttaattagttagggggccaaaatcgcaccttttaaaaaaataggg-gccaaaagtgca 41446308  T
Q  197 attaagccta 206  Q
    ||||| ||||    
T  41446309 attaatccta 41446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 18201503 - 18201704
Alignment:
Q  8 acccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactg 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||      ||| |||||||    
T  18201503 acccacaatggtcgacacgtgacacctcacttaagggatatgggtaccacgtcagcgaagactaagtcaaaagtggccttggg------ggccaaaactg 18201596  T
Q  108 ccaaagagccaatac--gagtgctt-ttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    |||||||  | ||||   || | || ||||||| |||||||| | || ||||||||||| |||| |||||||||| |||| ||||||||| |||||||||    
T  18201597 ccaaagattcgatacataaggggttgttttgtattttaattagtcagggggccaaaatcgcaacttttgaaaagacagggggccaaaagtgcaattaagc 18201696  T
Q  204 ctatatta 211  Q
    || |||||    
T  18201697 ctttatta 18201704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 36801771 - 36801570
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||           
T  36801771 acgtggcacccacaatggtcgacacgtggcacatcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttgggggt------c 36801678  T
Q  101 aaaactgccaaagagccaata---cgagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||| |||||||| ||||||    | | ||| ||||||| |||||||| |||  ||||||||||| |||| |||||||||| | || ||||||||| ||    
T  36801677 aaaaccgccaaagatccaatatatagggggctgttttgtattttaattagttaaggggccaaaatcgcaacttttgaaaagacacggggccaaaagtgca 36801578  T
Q  197 attaagcc 204  Q
    ||||||||    
T  36801577 attaagcc 36801570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21948933 - 21949024
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||    
T  21948933 acgtggcacccacaatggtcgacaagtgacacctcacttaagggatgtgagtgccacgtcagcgaagactaagtcaaaagtgatcttggggg 21949024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 40348348 - 40348160
Alignment:
Q  7 cacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaact 106  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||      ||| ||||||    
T  40348348 cacccacaatggtcgacatgtggcacctcacttaagggatatgggtgccacgtcagcaaagattaagttaaaagtggtcttggg------ggccaaaact 40348255  T
Q  107 gccaaagagccaatacg-agtg-cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaat 198  Q
    |||||||| |||||||| || | || ||||||| |||||||| |||| ||| |||||||  ||| ||| |||| |||||| ||||||||| ||||    
T  40348254 gccaaagatccaatacgtagggactgttttgtattttaattagttagggggtcaaaatcgtaacttttaaaaaaatagggggccaaaagtgcaat 40348160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 202
Target Start/End: Original strand, 29673571 - 29673761
Alignment:
Q  9 cccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgc 108  Q
    |||||||||||||||| ||||||||| ||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||      ||| ||||||||    
T  29673571 cccacaatggtcgacacgtgacaccttacttaaatgatgtgggtgccacgtcagcgaagactaagttaaaagtggtcttggg------ggccaaaactgc 29673664  T
Q  109 caaagagccaatac-gagtgctt-ttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
     ||||| |||||||  || | || ||||||| |||||||| ||||||| |||||||| |||| ||||||||||||||| |||||| || ||||||||    
T  29673665 taaagatccaatacataggggttgttttgtattttaattagttagaggtccaaaatcacaacttttgaaaagatagggggccaaaggtgcaattaag 29673761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 47350999 - 47350795
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||| ||||||||| ||| ||||||  |||||||||||||||||||||||||||| ||||||      |||     
T  47350999 acgtggcacccacaatggtcgacacgtggcacatcacttaagagatgtgggtgaaacgtcagcgaagactaagtcaaaagtggccttggg------ggcc 47350906  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| ||||||| |||||||| |||  |||| |||||| |||| ||||||||||| ||| ||||||| | ||    
T  47350905 aaaactgccaaagatccaatacatagggggctattttgtattttaattagttaaggggctaaaatcgcaacttttgaaaagattgggggccaaaaatgca 47350806  T
Q  197 attaagcctat 207  Q
    |||||||||||    
T  47350805 attaagcctat 47350795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 17802024 - 17802220
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| ||||||||||||||||||   | ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||      | |||     
T  17802024 acgtgacacccacaatggtcgacacagg-cacctcacttaagggatgtgggtgccacgtcagcaaagagtaagtcaaaagtggtcttg------agggcc 17802116  T
Q  101 aaaactgccaaagagccaatacg--agtgcttttttgtatttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaat 198  Q
    ||| |||||||||| ||||||||  || ||| ||||||||||||||| |||| || |||||||| |||| ||||||||||||||| | ||||||| ||||    
T  17802117 aaagctgccaaagatccaatacgtaagggctgttttgtatttaattaattag-ggaccaaaatcgcaacttttgaaaagataggg-gtcaaaagtgcaat 17802214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38974553 - 38974634
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38974553 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtg 38974634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 40139672 - 40139875
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || |||||||||   ||||||      ||| ||    
T  40139672 gtggcactcacaatggtcgacacgtggcacctcacttaagggatatgggtgccacgtcagcgaagagtatgtcaaaagtatccttggg------ggccaa 40139765  T
Q  103 aactgccaaagagccaatac-------gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagta 194  Q
    |||||||||||| |||||||       ||||| | ||||||| |||||||| |||| ||||||||||| |||| |||  |||||||||| |||||||||     
T  40139766 aactgccaaagatccaatacatacatagagtgttgttttgtattttaattagttag-gggccaaaatcgcaacttttagaaagatagggggccaaaagtg 40139864  T
Q  195 caattaagcct 205  Q
    |||||||||||    
T  40139865 caattaagcct 40139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 48926111 - 48925901
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| ||||||||||||| |||| ||| ||||||||||||||||| || ||| || ||||||||||||||||||||||||||  |||||||            
T  48926111 acgtgacacccacaatggttgacacgtggcacctcacttaagggatgtgagtgtcatgtcagcgaagactaagtcaaaagtggctttggggg-------c 48926019  T
Q  101 aaaactgccaaagagccaatac----gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtac 195  Q
    |||||||||||||| |||||||    ||| ||| ||||||| |||||||| |||| ||||||||||| |||| |||||||||||||||  | |||||| |    
T  48926018 aaaactgccaaagatccaatacatatgag-gctgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagataggggacaaaaagtgc 48925920  T
Q  196 aattaagcctatattataa 214  Q
    |||||| |||| |||||||    
T  48925919 aattaaacctaaattataa 48925901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 41446127 - 41445970
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aat 143  Q
    ||||| |||||||||||||||||||||||||||||||||||||||      | |||||||||||||| ||||||    ||| | | |||||||||| |||    
T  41446127 tgggtaccacgtcagcgaagactaagtcaaaagtggtcttggggg------ccaaaactgccaaagatccaatagatagagggttgttttgtattttaat 41446034  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    || |||||||| ||||||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  41446033 tagttagagggtcaaaatcgcaacttttgaaaagatagggagccaaaagtgcaattaagcctat 41445970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22165067 - 22165138
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaa 72  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  22165067 acgtggcactcacaatggtcgacatgtggcacctcacttaagggatatgggtgccacatcagcgaagactaa 22165138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22223774 - 22223845
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaa 72  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  22223774 acgtggcactcacaatggtcgacatgtggcacctcacttaagggatatgggtgccacatcagcgaagactaa 22223845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44434328 - 44434398
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagacta 71  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  44434328 acgtgacacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagacta 44434398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 38974564 - 38974413
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac--gag-tgcttttttgta-tttaat 143  Q
    |||||||||||||||||||||||||||||||||||| ||||||      ||| |||||||||||| | |||||||   || || | |||| || ||||||    
T  38974564 tgggtgccacgtcagcgaagactaagtcaaaagtgggcttggg------ggccaaaactgccaaatatccaatacataagatgttgttttatattttaat 38974471  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    || |||||||||||||||| |||| ||||||||||||||| ||||||| | |||||||    
T  38974470 taattagagggccaaaatcacaacttttgaaaagatagggggccaaaaatgcaattaa 38974413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 8409232 - 8409385
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaatta 145  Q
    |||||||||||||||||||| |||||||||||||  |||||||     || |||||||||||||| |||||||   | | ||| ||||||| |||| |||    
T  8409232 ggtgccacgtcagcgaagaccaagtcaaaagtggcattggggg-----gccaaaactgccaaagatccaatacatagggggctgttttgtattttattta 8409326  T
Q  146 tttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
     ||||| |||||||||| |||| ||| ||||||||||  ||||||||| ||||||||||    
T  8409327 gttagaaggccaaaatcgcaacttttaaaaagataggaggccaaaagtgcaattaagcc 8409385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 212
Target Start/End: Original strand, 36801760 - 36801922
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    |||||||||||||||||||||||||||||||||||   ||||||||       |||||||||||||| |||||||   | | | | ||||||| ||||||    
T  36801760 tgggtgccacgtcagcgaagactaagtcaaaagtgacattgggggt------caaaactgccaaagatccaatacatagggggttgttttgtattttaat 36801853  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattat 212  Q
    || ||||  ||| |||||| |||| ||||||||||||||| ||||||||| ||||||| |||| |||||    
T  36801854 tagttaggaggctaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaaacctaaattat 36801922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 17167992 - 17168189
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||||| ||||||   |||||| ||| |||||||||||||||| |||| ||||           
T  17167992 acgtggcaccgacaatggtcgacacgtggcaccccacttaagggatgtgggtg---cgtcagtgaaaactaagtcaaaagtggccttgagggt------c 17168082  T
Q  101 aaaactgccaaagagccaatac----gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtac 195  Q
    ||||||||||||||   |||||    ||| ||| ||||||| |||||||| |||| |||||||||||  ||| |||||||||||||||  |||||||| |    
T  17168083 aaaactgccaaagatataatacataggag-gctgttttgtattttaattaattagggggccaaaatcgtaacttttgaaaagataggg-accaaaagtgc 17168180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 21202762 - 21202912
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtgcttttttgta-tttaa 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||      ||| |||||||||||||| |||||||    ||| | | ||||||| |||||    
T  21202762 tgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggccaaaactgccaaagatccaatacataggag-gttgttttgtattttaa 21202854  T
Q  143 ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    ||| |||| ||| ||||||| |||| |||| |||||||||| ||||||||| |||||||    
T  21202855 ttagttag-gggtcaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaa 21202912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 41930811 - 41930856
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  41930811 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 41930856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 204
Target Start/End: Complemental strand, 8409225 - 8409093
Alignment:
Q  71 aagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaa 166  Q
    ||||||||||||| ||||||||     || |||||||||||||| |||||||   | | ||| |||||||||| ||||| |||| ||||||||||  |||    
T  8409225 aagtcaaaagtggccttggggg-----gccaaaactgccaaagatccaatacatagggagctgttttgtattttaattagttagggggccaaaattgcaa 8409131  T
Q  167 catttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    | ||||||||||||||||| ||||||| ||||||||||    
T  8409130 cttttgaaaagatagggtgtcaaaagtgcaattaagcc 8409093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 205
Target Start/End: Complemental strand, 33159633 - 33159483
Alignment:
Q  52 tgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtatttaattattt 148  Q
    ||||| ||||||||||||||||||||||||||  |||||||      | ||||||| |||||| |||||||   | | ||| |||||||||| |||| ||    
T  33159633 tgccatgtcagcgaagactaagtcaaaagtggctttggggg------caaaaactgtcaaagatccaatacatagggggctgttttgtattttattagtt 33159540  T
Q  149 agagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    || ||||||||||| |||| ||| ||||||||||| |  |||||| |||||||||||    
T  33159539 agggggccaaaatcgcaacttttaaaaagatagggggttaaaagtgcaattaagcct 33159483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 44434339 - 44434186
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtgcttttttgta-tttaa 142  Q
    |||||| |||||||||||||||||||||||||||||||||||      |||| ||||||| |||||| | |||||    |||  || ||||||| |||||    
T  44434339 tgggtgtcacgtcagcgaagactaagtcaaaagtggtcttgg------aggccaaaactgtcaaagatctaatacataggag-actgttttgtattttaa 44434247  T
Q  143 ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    ||| | || ||||||||||| |||| |||||||||||| || ||||||||| ||||||||||    
T  44434246 ttagtaagggggccaaaatcgcaacttttgaaaagataagg-gccaaaagtgcaattaagcc 44434186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 29163166 - 29163083
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattataacaaacaaa 222  Q
    |||||||| |||| ||||||||||| |||| ||||||||||||||| || |||||| ||||||||||| |||| |||||| ||||    
T  29163166 tttaattagttagggggccaaaatcgcaacttttgaaaagatagggggcaaaaagtgcaattaagcct-tattttaacaaccaaa 29163083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 36204423 - 36204498
Alignment:
Q  131 ttttgtatttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    ||||||||||||||| |||| ||| ||||||| |||| ||||||||||||||| ||||||||| ||||||| |||||    
T  36204423 ttttgtatttaattagttag-gggtcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaaacctat 36204498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 45480076 - 45480140
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    |||||||| ||||||| |||||||| |||| ||||||||||||||| ||||||||| ||||||||    
T  45480076 tttaattagttagaggaccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaag 45480140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 40790877 - 40790985
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| |||||||||| ||||| |||| ||||||||||| |||| |||| |||||||||| ||||||||| ||    
T  40790877 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttggaaagataggg-gccaaaagtgca 40790975  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  40790976 attaagccta 40790985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 17168001 - 17167854
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aatta 145  Q
    ||||||||||||| |||||||||||||||||||| ||||          | |||||||||||||| |||||||   | | | | |||||||||| |||||    
T  17168001 ggtgccacgtcagtgaagactaagtcaaaagtggccttg----------ccaaaactgccaaagatccaatacatagggggttgttttgtattttaatta 17167912  T
Q  146 tttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
     |||| ||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||    
T  17167911 gttag-gggccaaaatcgcaacttttgaaaagataggg-gccaaaagtgcaattaagcct 17167854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 44434419 - 44434479
Alignment:
Q  10 ccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagacta 71  Q
    ||||| ||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||    
T  44434419 ccacagtggtcgacacgtggcacctcacttaagggatgtgggtgccac-tcagcgaagacta 44434479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 47350988 - 47351033
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||    
T  47350988 tgggtgccacgtcagcgaagactaagtcaaaagtggcattgggggt 47351033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 10555763 - 10555678
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaata 121  Q
    ||||||||||||| ||| |||||||||||||||| ||||| ||||||||| |||| ||||      |||| |||||||||||||| ||||||    
T  10555763 cacctcacttaagtgatgtgggtgccacgtcagcaaagaccaagtcaaaattggttttgg------aggccaaaactgccaaagatccaata 10555678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 37991481 - 37991413
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| ||| ||||||| |||| ||| ||||||||||| ||||||||||||| ||||||||    
T  37991481 tttaattaattagggggtcaaaatcgcaacttttaaaaagatagggggccaaaagtacaactaagccta 37991413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 43724727 - 43724771
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  43724727 tgggtgccacgtcagggaagactaagtcaaaagtggttttggggg 43724771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 11742864 - 11742971
Alignment:
Q  101 aaaactgccaaagagccaatac----gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtac 195  Q
    |||||||||||||| |||||||    ||| ||| |||||||||| ||||| |||| ||  ||||||| |||| ||||||||||||||| ||||||||| |    
T  11742864 aaaactgccaaagatccaatacataggag-gctgttttgtattttaattagttaggggatcaaaatcgcaacttttgaaaagatagggggccaaaagtgc 11742962  T
Q  196 aattaagcc 204  Q
    |||||||||    
T  11742963 aattaagcc 11742971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 30503814 - 30503705
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggc-caaaatctcaacatttgaaaagatagggtgccaaaagtac 195  Q
    |||||||||||||| |||||||   | | ||| |||||||||| ||||| ||||||||  ||||||| |||| ||| |||| |||||||||||||||| |    
T  30503814 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagagggggcaaaatcgcaactttttaaaacatagggtgccaaaagtgc 30503715  T
Q  196 aattaagcct 205  Q
    ||||||||||    
T  30503714 aattaagcct 30503705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 18201461 - 18201353
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| |||||||||| ||||| |||| ||||||||||| |||| |||  |||||||| | ||||||||| ||    
T  18201461 aaaactgccaaagatccaatacatagggggctgttttgtatttgaattagttagggggccaaaatcgcaacttttagaaagatagtgggccaaaagtgca 18201362  T
Q  197 attaagcct 205  Q
    |||||||||    
T  18201361 attaagcct 18201353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 19233414 - 19233337
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||| |||||||| |||||||||||||    
T  19233414 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagatagggttccaaaagtgcaattaagcctat 19233337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21202773 - 21202728
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggat 46  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||    
T  21202773 acgtggcacccacaatggtcgacacgtggcatctcacttaagggat 21202728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 208
Target Start/End: Complemental strand, 31530081 - 31529970
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| |||||||||| ||||| |||| ||||||||||| || | |||| |||||| | | ||||||||| ||    
T  31530081 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagggggccaaaatcgcatcttttggaaagatggtgggccaaaagtgca 31529982  T
Q  197 attaagcctata 208  Q
    ||||||||||||    
T  31529981 attaagcctata 31529970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 37858300 - 37858368
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||| |||||||| ||||||  |||| ||||||||||||||| | ||||||| |||||||||||||    
T  37858300 tttaattagttagagggtcaaaatgacaacttttgaaaagataggg-gtcaaaagtgcaattaagcctat 37858368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 47259069 - 47258961
Alignment:
Q  101 aaaactgccaaagagccaatacgagtg--cttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaa 197  Q
    |||||||||||||| |||||||   ||  || |||||||||| ||||| |||| ||||||||||  |||| ||||||||||||| | ||||||| | |||    
T  47259069 aaaactgccaaagatccaatacatatgggctgttttgtattttaattagttagggggccaaaattgcaacttttgaaaagatagagggccaaaaatgcaa 47258970  T
Q  198 ttaagccta 206  Q
    |||||||||    
T  47258969 ttaagccta 47258961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 7271589 - 7271546
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||    
T  7271589 tgggtgccacgtaagcgaagactaagtc-aaagtggtcttggggg 7271546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 21948944 - 21948900
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||    
T  21948944 tgggtgccacgtcaacgaaaactaagtcaaaagtggccttggggg 21948900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 32043670 - 32043618
Alignment:
Q  38 ttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggg 90  Q
    ||||| ||| |||||| ||||||||||||||| ||||||||| ||||||||||    
T  32043670 ttaagtgatgtgggtgtcacgtcagcgaagaccaagtcaaaattggtcttggg 32043618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 45260019 - 45259951
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| ||||||| ||||||||  ||| ||||||||||||||   |||||||| ||||||||||||    
T  45260019 tttaattagttagaggtccaaaatcgtaacttttgaaaagataggaaaccaaaagtgcaattaagccta 45259951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 48926100 - 48926144
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||    
T  48926100 tgggtgtcacgtcagtgaagactaagtcaaaagttgtcttggggg 48926144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 11742817 - 11742712
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   ||| ||| |||||||||| ||||| |||   ||| |||||| |||| ||| ||||||||||| ||||||||| ||    
T  11742817 aaaactgccaaagatccaatacatagagggctgttttgtattttaattaattaagaggctaaaatcgcaacttttaaaaagatagggggccaaaagtgca 11742718  T
Q  197 attaag 202  Q
    ||||||    
T  11742717 attaag 11742712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 28350297 - 28350226
Alignment:
Q  21 gacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||| ||||||||||||| ||| || ||||||| |||||| |||   |||||||| ||||||||||||    
T  28350297 gacatgtggcacctcacttaagtgatgtgagtgccacatcagcgtagatcgagtcaaaattggtcttggggg 28350226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 29163296 - 29163363
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| ||||||||| |||||| |||| |||||||||||||   | ||||||| |||||||||||    
T  29163296 tttaattagttagagggctaaaatcgcaacttttgaaaagatagaaggtcaaaagtgcaattaagcct 29163363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 30757298 - 30757215
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattata 213  Q
    |||||||||||| ||| |||| || ||| || | |||| ||| |||||||||||  |||||||| |||||||||||||||||||    
T  30757298 ttttgtatttaaattagttaggggtccataaccgcaacttttaaaaagataggggtccaaaagtgcaattaagcctatattata 30757215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 39142437 - 39142504
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| |||| |||  |||||| |||| |||||||||||||||  |||||||| |||||||||||    
T  39142437 tttaattagttagggggtaaaaatcacaacttttgaaaagataggggaccaaaagtgcaattaagcct 39142504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 40139595 - 40139528
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| |||| ||||||||||| |||| |||  ||||||||||  |||||||| |||||||||||    
T  40139595 tttaattagttagggggccaaaatcgcaacttttagaaagataggggcccaaaagtgcaattaagcct 40139528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 45863088 - 45863018
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatat 209  Q
    |||||||| |||| | || |||||| |||| ||||||||||||||| | ||||||| |||||||||||||||    
T  45863088 tttaattagttagggagctaaaatcgcaacttttgaaaagataggg-gtcaaaagtgcaattaagcctatat 45863018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 45863177 - 45863285
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| ||||||| |||||||| |||| ||||||||||  |||| |||| |||||||| | ||||||||| ||    
T  45863177 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagggggccaaaattgcaacttttggaaagatagag-gccaaaagtgca 45863275  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  45863276 attaagccta 45863285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 30699263 - 30699337
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||||||| ||| ||||||| ||| || | |||| |||||||||||||||  |||||||| ||||||||||    
T  30699263 ttttgtatttaaattagttagaggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 30699337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 37996091 - 37996013
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctata 208  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||||    
T  37996091 ttttgtatttaaattagttaggggtccataaccgcaacgtttgaaaagataggggtccaaaagtgcaattaagcctata 37996013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 930947 - 931024
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||||    
T  930947 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctat 931024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 1450049 - 1449980
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||| |||| ||||||||||  |||| |||  |||||||||  ||||||||| |||||||||||||    
T  1450049 tttaattagttagggggccaaaattgcaactttttgaaagataggtggccaaaagtgcaattaagcctat 1449980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 10573441 - 10573494
Alignment:
Q  26 gtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaa 79  Q
    ||||||||||| ||||| ||| |||||||||||| ||||||||| || ||||||    
T  10573441 gtgacacctcatttaagtgatgtgggtgccacgttagcgaagaccaaatcaaaa 10573494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 21954336 - 21954389
Alignment:
Q  152 gggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||||||||||| |||| |||| |||||||||| | ||||||| |||||||||||    
T  21954336 gggccaaaatcgcaacttttggaaagatagggggtcaaaagtgcaattaagcct 21954389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 37452288 - 37452365
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||||    
T  37452288 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctat 37452365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 18852732 - 18852808
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || |||||| |||| ||||||||||  |||||||| ||||||||||||    
T  18852732 ttttgtatttaaattagttaggggtccataacctcaacttttggaaagataggggtccaaaagtgcaattaagccta 18852808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 22164992 - 22164924
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||  ||| ||||||| |||| |||  |||||||| | ||||||||||||||||||||||    
T  22164992 tttaattaattaaggggtcaaaatcgcaacttttagaaagatagagggccaaaagtacaattaagccta 22164924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 22223699 - 22223631
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||  ||| ||||||| |||| |||  |||||||| | ||||||||||||||||||||||    
T  22223699 tttaattaattaaggggtcaaaatcgcaacttttagaaagatagagggccaaaagtacaattaagccta 22223631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 25986999 - 25986923
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  25986999 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 25986923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 35121487 - 35121411
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  35121487 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagccta 35121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 35121652 - 35121728
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  35121652 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 35121728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 47259305 - 47259372
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| ||| ||||||| |||| ||||||||||||  | ||||||||| ||||||||||||    
T  47259305 tttaattagttag-gggtcaaaatcacaacttttgaaaagatatagggccaaaagtgcaattaagccta 47259372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 9e-45; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 4146308 - 4146110
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||      |||     
T  4146308 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatgtgtgtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggcc 4146215  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||||| |||||| |||||||   | | ||| ||||||| |||||||| |||| || |||||||| |||| ||||||||||||||| ||||||| | ||    
T  4146214 aaaactgtcaaagatccaatacatagggggctgttttgtattttaattagttaggggtccaaaatcgcaacttttgaaaagatagggggccaaaaatgca 4146115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 12610386 - 12610587
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||      |||     
T  12610386 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatatgggtgccacgtcaccgaagactaagtcaaaagtggccttagg------ggcc 12610479  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| ||||||| |||||||| |||| ||| ||||||| |||| ||||||||||||| | ||||||||| ||    
T  12610480 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagggggtcaaaatcacaacttttgaaaagatagagggccaaaagtgca 12610579  T
Q  197 attaagcc 204  Q
    ||||||||    
T  12610580 attaagcc 12610587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 246
Target Start/End: Original strand, 8714073 - 8714308
Alignment:
Q  10 ccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgcc 109  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||      ||| |||||| ||    
T  8714073 ccacaatggtcgacacgtggcacctcacttaagggatatgggtgccacgtcagcaaagactaagtcaaaagtggtcttggg------ggccaaaactacc 8714166  T
Q  110 aaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||||| |||||||   | |  || ||||||| |||||||| |||  | ||||||||| |||| ||| |||| || ||| |||||||   |||||||||||    
T  8714167 aaagatccaatacataggggactgttttgtattttaattagttatggagccaaaatcgcaacttttaaaaaaattgggggccaaaaaagcaattaagcct 8714266  T
Q  206 atattataacaaacaaacatcattaa-gatagacgtttgtga 246  Q
    | ||||||||||||||||| |||||| |||||||||||||||    
T  8714267 aaattataacaaacaaacaccattaacgatagacgtttgtga 8714308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 10332157 - 10331954
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  |||||      |||     
T  10332157 acgtgacacccacaatggtcgacatgtggcacctcacttaagtgatgtgggtgccacgtcagcgaagactaagtcaaaagtggcattggg------ggcc 10332064  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| ||||||| |||||||| ||   ||||||||||| |||| ||||||||||||||| | ||||||| ||    
T  10332063 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttttggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgca 10331964  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  10331963 attaagccta 10331954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8006183 - 8006093
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggg 91  Q
    |||||||||||||||||||||||| | | || |||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||    
T  8006183 acgtggcacccacaatggtcgacacgcggcatctcacttaagggatgtgggtgccacgtcagcgaagactaactcaaaagtggccttgggg 8006093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 208
Target Start/End: Complemental strand, 37887822 - 37887668
Alignment:
Q  52 tgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatt 147  Q
    |||||| ||||||||||| ||||||||| ||||||||||||      | |||||||||||||| |||||||   |||  || |||||||||| ||||| |    
T  37887822 tgccacatcagcgaagaccaagtcaaaattggtcttggggg------ccaaaactgccaaagatccaatacatagaggactgttttgtattttaattagt 37887729  T
Q  148 tagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctata 208  Q
    ||||||||||||||| |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  37887728 tagagggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcctata 37887668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12881869 - 12881788
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    ||||||||| ||||||||||||||  || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  12881869 acgtggcactcacaatggtcgacacatggcacctcacttaagggatgtgggtgccacgtcagcgaaaactaagtcaaaagtg 12881788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 15204143 - 15204347
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| ||| |||||||||||||| ||| ||||| ||||||||||||| |||| || |||||||||||||||||||||||||| ||||||      |||     
T  15204143 acgtgtcactcacaatggtcgacacgtggcaccttacttaagggatataggtgtcatgtcagcgaagactaagtcaaaagtggccttggg------ggcc 15204236  T
Q  101 aaaactgccaaagagccaatac--gagtg-cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   || | || ||||||| |||||||| |||| ||| ||||||| |||| |||  |||| ||||| | ||||||| ||    
T  15204237 aaaactgccaaagatccaatacataagggactgttttgtattttaattagttagggggtcaaaatcgcaacttttagaaagttaggg-gtcaaaagtgca 15204335  T
Q  197 attaagcctata 208  Q
    ||||||||||||    
T  15204336 attaagcctata 15204347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 12610397 - 12610243
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    ||||||||||||||||||||||||||||||||||| |||||||      ||| |||||||||||||| |||||||   | | ||| ||||||| ||||||    
T  12610397 tgggtgccacgtcagcgaagactaagtcaaaagtgatcttggg------ggccaaaactgccaaagatccaatacatagggggctgttttgtattttaat 12610304  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    || |||| ||| ||||||| |||| ||| ||||||||||| ||||||||| |||||||||||    
T  12610303 taattag-gggacaaaatcgcaacttttaaaaagatagggggccaaaagtgcaattaagcct 12610243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16039670 - 16039579
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||| |||||||||||||||||||||| | |||| |||||||||| || |||||||||||||||||| ||||||||||||||  |||||||    
T  16039670 acgtgacacccacaatggtcgacatgtgccgcctcgcttaagggatgtgagtgccacgtcagcgaagattaagtcaaaagtggctttggggg 16039579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 25694007 - 25693891
Alignment:
Q  101 aaaactgccaaagagccaatacga--gtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaa 197  Q
    |||||||||||||| |||||||    | ||| |||||||||| ||||| |||||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  25694007 aaaactgccaaagatccaatacataggggctgttttgtattttaattagttagagggccaaaatcgcaacttttgaaaagatagggggccaaaagtacaa 25693908  T
Q  198 ttaagcctatattataa 214  Q
    ||||||| | |||||||    
T  25693907 ttaagccaaaattataa 25693891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 39573646 - 39573838
Alignment:
Q  10 ccacaatggtcgacatgtgacacctcacttaagggatatgggt-gccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgc 108  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||| | |||||||||||||| ||||||||||||||  ||||| ||       |||||||     
T  39573646 ccacaatggtcgacacgtggcacctcacttaagggatgtgggtggtcacgtcagcgaagattaagtcaaaagtggcattgggagt------caaaactgt 39573739  T
Q  109 caaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    |||||| |||||||   | | ||| ||||||| |||||||| | |  ||||||||||| |||| ||| |||||||||||  |||||||| |||||||||    
T  39573740 caaagatccaatacatagggggctgttttgtattttaattagtaatggggccaaaatcgcaacttttaaaaagataggggaccaaaagtgcaattaagc 39573838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 4146297 - 4146451
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtgcttttttgta-tttaa 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||      ||| ||||||| |||||| |||||||    ||| | | ||||||| |||||    
T  4146297 tgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggccaaaactgacaaagatccaatacatatgag-gttgttttgtattttaa 4146389  T
Q  143 ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
     || |||| || |||||||| |||| |||| |||||||||| ||||||||| ||||||||||    
T  4146390 ctagttaggggaccaaaatcacaacttttggaaagatagggggccaaaagtgcaattaagcc 4146451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 16822948 - 16822785
Alignment:
Q  38 ttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtgcttttt 133  Q
    ||||||||| |||||||||| ||||||| ||||||||||||| | || |||||||      |||||||||||||||| |||||||    | |  || |||    
T  16822948 ttaagggatgtgggtgccacatcagcgaggactaagtcaaaattagttttggggg------ctaaaactgccaaagatccaatacataaggggactgttt 16822855  T
Q  134 tgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    ||||||| ||||| |||| |||||||||||  ||| ||| ||||||||||| ||||||||| ||||||||    
T  16822854 tgtattttaattaattagtgggccaaaatcgtaacttttaaaaagatagggggccaaaagtgcaattaag 16822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 8360878 - 8361029
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatacgagtg---cttttttgta-tttaat 143  Q
    |||||| |||||||||||||| ||||||||||||||||||||||     ||| |||| ||||||||| |||||||   ||   || ||||| | ||||||    
T  8360878 tgggtgacacgtcagcgaagattaagtcaaaagtggtcttgggg-----ggccaaaattgccaaagatccaatacatatgagactgttttggattttaat 8360972  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    || |||| ||||||||||| |||| ||| |||||||||||  ||||||||||||||||    
T  8360973 tagttagggggccaaaatcacaacttttaaaaagataggg-accaaaagtacaattaa 8361029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 8006172 - 8006323
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||      ||| |||||||||||||| |||||||   | |  || ||||||| ||||||    
T  8006172 tgggtgccacgtcagcgaatactaagtcaaaagtggccttagg------ggccaaaactgccaaagatccaatacataggggactgttttgtattttaat 8006265  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    ||  ||  ||||||||||| |||| ||||||||||||||  ||||||||| |||||||    
T  8006266 taggtatggggccaaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaa 8006323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 206
Target Start/End: Original strand, 16039659 - 16039816
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtgcttttttgta-tttaa 142  Q
    |||||| |||||||||||||||||||||||||| || ||||||      ||| |||||||||||||  |||||||    | | ||| ||||||| |||||    
T  16039659 tgggtgtcacgtcagcgaagactaagtcaaaagcggccttggg------ggccaaaactgccaaaggtccaatacataggggggctgttttgtattttaa 16039752  T
Q  143 ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    ||| |||| || |||||||| |||| |||| |||||||||| || |||||| |||| |||||||    
T  16039753 ttagttaggggaccaaaatcgcaacttttggaaagatagggggctaaaagtgcaatcaagccta 16039816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 17235183 - 17235135
Alignment:
Q  157 aaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  17235183 aaaatcgcaacttttgaaaagatagggggccaaaagtacaattaagcct 17235135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 12881861 - 12881900
Alignment:
Q  51 gtgccacgtcagcgaagactaagtcaaaagtggtcttggg 90  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  12881861 gtgccacgtcagcgaagactaagtgaaaagtggtcttggg 12881900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 6815566 - 6815500
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||| |||| |||  |||||| |||| ||||||||||||||| ||||||||| ||||||||||    
T  6815566 tttaattagttagggggttaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 6815500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 13960929 - 13961005
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| ||||||| ||| || | |||| ||||||||||||| |  |||||||||||||||||||||    
T  13960929 ttttgtatttaaattagttagaggtccataaccgcaacttttgaaaagatagaggtccaaaagtacaattaagccta 13961005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 15204069 - 15204001
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| ||||||||||| |||| |||  |||||||||  ||||||||| ||||||||||||    
T  15204069 tttaattagttagggggccaaaatcacaacttttagaaagataggtggccaaaagtgcaattaagccta 15204001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 20974648 - 20974724
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||||||||||||||||    
T  20974648 ttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtacaattaagccta 20974724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 6815677 - 6815743
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| |||| |||||||||||  ||| ||||||||||||| | ||||||||| |||||||||||    
T  6815677 tttaattagttag-gggccaaaatcataacttttgaaaagatagagggccaaaagtgcaattaagcct 6815743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 10169081 - 10169018
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    |||||||| |||| || |||||||| |||| ||| ||||||||||| ||||||||| |||||||    
T  10169081 tttaattagttaggggaccaaaatcgcaacttttaaaaagatagggggccaaaagtgcaattaa 10169018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 10332146 - 10332181
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    |||||| |||||||||||||||||||||||||||||    
T  10332146 tgggtgtcacgtcagcgaagactaagtcaaaagtgg 10332181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 33759414 - 33759379
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    |||||||||||||| |||||||||||||||||||||    
T  33759414 tgggtgccacgtcatcgaagactaagtcaaaagtgg 33759379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 39049124 - 39049015
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| |||||||||| ||||| |||  ||| ||||||| |||| ||||||||||||| | ||||||| | ||    
T  39049124 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttaaggggtcaaaatcgcaacttttgaaaagatagagggccaaaactgca 39049025  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  39049024 attaagccta 39049015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 41083337 - 41083404
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| |||||||||||||||| |||  ||| |||| |||||  ||||||||| |||||||||||    
T  41083337 tttaattagttagagggccaaaatcgcaattttttaaaatataggaggccaaaagtgcaattaagcct 41083404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 210
Target Start/End: Complemental strand, 41138672 - 41138555
Alignment:
Q  97 ggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaag 192  Q
    |||||||||||||||||| ||||||    | | ||| |||||||||| ||||| |||| |||| |||||| |||| |||  |||||||||| || |||||    
T  41138672 ggctaaaactgccaaagatccaatatatagggggctgttttgtattttaattagttagggggctaaaatcgcaacttttagaaagatagggggctaaaag 41138573  T
Q  193 tacaattaagcctatatt 210  Q
    | ||||||||||| ||||    
T  41138572 tgcaattaagcctttatt 41138555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 931887 - 931845
Alignment:
Q  164 caacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||| |||||||||||||||  |||||||||||||||||||||    
T  931887 caacttttgaaaagatagggatccaaaagtacaattaagccta 931845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 11480110 - 11480024
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattataaca 216  Q
    |||||||||||| ||| |||| || ||| || |||||| |||| ||||||||||  |||||||| ||||||||||||| ||| ||||    
T  11480110 ttttgtatttaaattagttaggggtccataacctcaacttttggaaagataggggtccaaaagtgcaattaagcctattttaaaaca 11480024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 17235266 - 17235320
Alignment:
Q  152 gggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    ||||||||||  |||| |||||||||||||||  |||||||| ||||||||||||    
T  17235266 gggccaaaattgcaacttttgaaaagataggggaccaaaagtgcaattaagccta 17235320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 20040972 - 20041021
Alignment:
Q  152 gggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    ||||||||||| |||| ||||||||||||||| ||||||||| ||||||||    
T  20040972 gggccaaaatcgcaacttttgaaaagataggg-gccaaaagtgcaattaag 20041021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 34734312 - 34734393
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatta 211  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||| ||||    
T  34734312 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctaaatta 34734393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 43586025 - 43586106
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatta 211  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| |||||||||||| ||||    
T  43586025 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaatta 43586106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 1055445 - 1055369
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| ||||||| ||| || | |||| |||||||||||||||  |||||||| ||||||| ||||    
T  1055445 ttttgtatttaaattagttagaggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaaaccta 1055369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 3020833 - 3020909
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  3020833 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 3020909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 3223523 - 3223603
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| ||||||||||| ||||    
T  3223523 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctttatt 3223603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 18403139 - 18403095
Alignment:
Q  49 gggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    ||||||||||||| || ||||| |||||||| |||||||||||||    
T  18403139 gggtgccacgtcaacgtagactgagtcaaaattggtcttgggggt 18403095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 22052513 - 22052437
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||| |||||||||| ||||||||| ||||||||||||    
T  22052513 ttttgtatttaaattagttaggggtccataaccgcaacttttggaaagatagggggccaaaagtgcaattaagccta 22052437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 23263220 - 23263144
Alignment:
Q  130 tttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||    
T  23263220 tttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcct 23263144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 25631160 - 25631084
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  25631160 ttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtgcaattaagccta 25631084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 31456134 - 31456178
Alignment:
Q  164 caacatttgaaaagatagggtgccaaaagtacaattaagcctata 208  Q
    |||| |||||||||||||||  |||||||| ||||||||||||||    
T  31456134 caacttttgaaaagataggggtccaaaagtgcaattaagcctata 31456178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 43222938 - 43223002
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    |||||||| |||| ||||||||| |  ||  |||| |||||||||| ||||||||||||||||||    
T  43222938 tttaattagttagggggccaaaaccgtaatttttggaaagatagggggccaaaagtacaattaag 43223002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 4e-44; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 32498576 - 32498376
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||      ||| ||    
T  32498576 gtggcacccacaatggtcgacacgtggcacctcacttaagggatatgggtgccacgttagcgaagactaagttaaaagtggccttggg------ggccaa 32498483  T
Q  103 aactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaat 198  Q
    |||||||||||| | |||||   | | ||| ||||||| |||||||| |||| ||||||||||| |||| ||||||||||||||| ||||||||| ||||    
T  32498482 aactgccaaagatctaatacatagggggctgttttgtattttaattagttag-gggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaat 32498384  T
Q  199 taagccta 206  Q
    ||||||||    
T  32498383 taagccta 32498376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 23623622 - 23623421
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||      |||     
T  23623622 acgtgacacccacaatggtccacatgtggcacctcacttaagggatgtgggtaccacgtcagcgaagactaagtcaaaagtgggcttggg------ggcc 23623529  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||||| |||||| | |||||   | |  || ||||||| |||||||| ||||||| |||||||| |||| |||||||||||| || | ||||||| ||    
T  23623528 aaaactgtcaaagatctaatacatagggaactgttttgtattttaattaattagaggaccaaaatcgcaacttttgaaaagatatggggtcaaaagtgca 23623429  T
Q  197 attaagcc 204  Q
    ||||||||    
T  23623428 attaagcc 23623421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8038231 - 8038140
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  8038231 acgtggcatccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacatcagcgaagactaagtcaaaagtggtcttggggg 8038140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5548003 - 5548091
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgg 89  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  5548003 acgtgacacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccatgtcagcgaagactaagtcaaaagtggtcttgg 5548091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 34608551 - 34608370
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtga---cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaag 97  Q
    ||||||||||||||||||||||||||||    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  |||      | |    
T  34608551 acgtggcacccacaatggtcgacatgtggtggcacctcacttaagagatgtgggtgccacgtcagcgaagactaagtcaaaagtggcattg------agg 34608458  T
Q  98 gctaaaactgccaaagagccaatac--gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagg 182  Q
    || |||||||||||||| |||||||    | ||| |||| || |||||||| |||||||| |||||||||||| ||||||||||||||    
T  34608457 gccaaaactgccaaagatccaatacatatgggctgttttatattttaattagttagagggtcaaaatctcaacttttgaaaagatagg 34608370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17074876 - 17074958
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  17074876 acgtgacacccccaatggtcgacacgtgacacctcacttaagggatgtgggtgccacgtcagcgaagaccaagtcaaaagtgg 17074958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17573394 - 17573312
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  17573394 acgtgacacccccaatggtcgacacgtgacacctcacttaagggatgtgggtgccacgtcagcgaagaccaagtcaaaagtgg 17573312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 27300630 - 27300831
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||| || |||||||||| ||| ||| ||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||      |||     
T  27300630 acgtggtacacacaatggtcaacacgtggcacctcacttaagggatgtgagtgtcacgtcagcgaagactaagtcaaaagtggtcttggg------ggcc 27300723  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||| | |||||||   | | ||| ||||||| |||||||| |||| ||||||||||  |||| ||| ||||||||| |   ||||||| ||    
T  27300724 aaaactgccaaatatccaatacatagggggctgttttgtattttaattagttagggggccaaaattacaacttttaaaaagatagaggatcaaaagtgca 27300823  T
Q  197 attaagcc 204  Q
    ||||||||    
T  27300824 attaagcc 27300831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 32164978 - 32165093
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||| ||||      ||||     
T  32164978 acgtggcacccacaatggtcgaaacgtgatacctcgcttaagggatgtgggtgccacgtcagcgaagattaagtcaaaagtggttttgg------aggcc 32165071  T
Q  101 aaaactgccaaagagccaatac 122  Q
    |||||||||||||| |||||||    
T  32165072 aaaactgccaaagatccaatac 32165093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13229463 - 13229544
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    |||||||||||| ||||||||||| |||  |||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  13229463 acgtggcacccataatggtcgacacgtggtacctcacttaaaagatgtgggtgccacgtcagcgaagactaagtcaaaagtg 13229544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15589836 - 15589625
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| |||| ||||||||||||| ||| |||||||| |||||||| |||||||||||||||| |||||||||| ||||||||  |||||      |||     
T  15589836 acgtgacacctacaatggtcgacacgtggcacctcacgtaagggatgtgggtgccacgtcagcaaagactaagttaaaagtggctttggg------ggcc 15589743  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||||||||||||   |||||   | | ||| ||||||| |||||||| |||| | | ||||||| |||| ||| ||||||||||| |  |||||| ||    
T  15589742 aaaactgccaaagatttaatacatagggagctattttgtattttaattagttagggagtcaaaatcgcaacttttaaaaagatagggggtaaaaagtgca 15589643  T
Q  197 attaagcctatattataa 214  Q
    ||||| |||||| |||||    
T  15589642 attaaccctataatataa 15589625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 31948007 - 31947851
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtgcttttttgtattt-aa 142  Q
    ||||| |||||||| ||||||||||||||||||||| |||||      || | |||||||||||||| |||||||    ||| ||| |||||||||| ||    
T  31948007 tgggtaccacgtcaacgaagactaagtcaaaagtggccttgg------agtc-aaaactgccaaagatccaatacataggag-gctgttttgtattttaa 31947916  T
Q  143 ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    ||| |||| ||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  31947915 ttagttagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctat 31947851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 44807205 - 44807389
Alignment:
Q  11 cacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgcca 110  Q
    ||||||||| |||| ||| ||||||||||||||||| || |||||||||        |||||||||||||||| ||||||||      | ||||||||||    
T  44807205 cacaatggttgacacgtggcacctcacttaagggatgtgagtgccacgt--------actaagtcaaaagtggccttggggg------ccaaaactgcca 44807290  T
Q  111 aagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||| |||||||   | | ||| |||||||||| ||||| |||| ||||||||||| |||| ||||||||||||||| | ||||||| |||||||||||    
T  44807291 aagatccaatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcct 44807389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 205
Target Start/End: Complemental strand, 36624076 - 36623904
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagt 126  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||       || |||||||||||||| |||||||   | |     
T  36624076 cacctcacttaagggatgtgggtgccacgtcaacgaagactaagtcaaaagtggccttggg------agccaaaactgccaaagatccaatacatagggg 36623983  T
Q  127 gcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    | | ||||||| |||||||| ||||  |||||||||| |||| |||||| ||||| || | ||||||| |||||||||||    
T  36623982 gatgttttgtattttaattaattaggaggccaaaatcgcaacttttgaagagata-ggagtcaaaagtgcaattaagcct 36623904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 41368549 - 41368388
Alignment:
Q  4 tggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaa 103  Q
    |||||||||||| |||||||| ||| ||| ||||||||||||| |||||| ||| ||||||||||||||| ||||||||| |||| ||||       |||    
T  41368549 tggcacccacaacggtcgacacgtggcacgtcacttaagggatgtgggtgtcacatcagcgaagactaagccaaaagtggccttgagggt------caaa 41368456  T
Q  104 actgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaac 167  Q
    ||||||||||| |||||||   | | ||| ||||||| |||||||| |||| ||||||||||| ||||    
T  41368455 actgccaaagatccaatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaac 41368388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 40021640 - 40021828
Alignment:
Q  9 cccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgc 108  Q
    |||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||      ||||||||||||| ||||||      ||||||||||||    
T  40021640 cccacaatggtcgacacgtggcacctcatttaagggatgtgggtgccacgtcagcg------aagtcaaaagtggccttggg------ggctaaaactgc 40021727  T
Q  109 caaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||| |||||||   | |   | ||||||| |||||||| |||||||||| ||||| |||| |||||||| ||| |   |||||||| ||||||||||    
T  40021728 caaagatccaatacataggggattgttttgtattttaattagttagagggcctaaatcgcaacttttgaaaaaataagagaccaaaagtgcaattaagcc 40021827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 7477534 - 7477328
Alignment:
Q  4 tggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaa 103  Q
    ||||||||| ||||||||||| ||| || ||||||||||| || ||| ||||| ||||||||||||||| ||||||||| | |||||      ||| |||    
T  7477534 tggcacccataatggtcgacacgtggcatctcacttaaggaatgtgg-tgccatgtcagcgaagactaaatcaaaagtgatattggg------ggccaaa 7477442  T
Q  104 actgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaatt 199  Q
    ||||||||||| | |||||     | ||| ||||||| |||||||| |||| || |||||||| |||| ||| |||||| | || ||||||||| |||||    
T  7477441 actgccaaagatctaatacataaggggctgttttgtattttaattagttaggggaccaaaatcgcaacttttaaaaagacaaggggccaaaagtgcaatt 7477342  T
Q  200 aagcctatattata 213  Q
    || ||| |||||||    
T  7477341 aaacctttattata 7477328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 206
Target Start/End: Complemental strand, 7658756 - 7658600
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtgcttttttgtattt-aa 142  Q
    |||||||||||||||||||  |||||||||||||||  |||||||      | |||| ||||||||| |||||||    ||| ||| |||||||||| ||    
T  7658756 tgggtgccacgtcagcgaaagctaagtcaaaagtggcattggggg------ccaaaaatgccaaagatccaatacttatgag-gctgttttgtattttaa 7658664  T
Q  143 ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    ||| |||  ||||||||||| |||| ||||||||||||||| | ||||||| ||||||||||||    
T  7658663 ttagttatggggccaaaatcacaacttttgaaaagatagggggtcaaaagtgcaattaagccta 7658600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7658745 - 7658790
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggat 46  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  7658745 acgtggcacccacaatggtcgacatgtggcacctcacttaagggat 7658790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 206
Target Start/End: Original strand, 23623611 - 23623767
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    |||||| ||||||||||||||||||||||||||||||||||||      ||||||||| | |||||| |||||||   | ||||| |||| || ||||||    
T  23623611 tgggtgtcacgtcagcgaagactaagtcaaaagtggtcttggg------ggctaaaacaggcaaagatccaatacatagggtgctgttttttattttaat 23623704  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    || |||| |||| |||||| |||  ||| ||||||||| |  |||||||| ||||||| ||||    
T  23623705 tagttagggggctaaaatcgcaatttttaaaaagatagaggtccaaaagtgcaattaaaccta 23623767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 26919920 - 26920031
Alignment:
Q  99 ctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagta 194  Q
    |||||| ||||||||| |||||||   | | |||||||||||||| ||||| |||| | | ||||||| |||| ||||||||||||||| |||||||||     
T  26919920 ctaaaattgccaaagatccaatacatagggggcttttttgtattttaattacttagggagtcaaaatcacaacttttgaaaagatagggggccaaaagtg 26920019  T
Q  195 caattaagccta 206  Q
    ||||||||||||    
T  26920020 caattaagccta 26920031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 33947118 - 33947037
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatta 211  Q
    |||||||||||| ||| |||| || ||| ||||||||| |||| ||||||||||  ||||||||||||||||||||||||||    
T  33947118 ttttgtatttaaattagttaggggtccataatctcaacttttggaaagataggggtccaaaagtacaattaagcctatatta 33947037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 213
Target Start/End: Original strand, 41368541 - 41368704
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    ||||||||| |||| | ||||||||||||||||||||||||||      ||| ||||||||||||||  ||||||   | | ||| ||||||| ||||||    
T  41368541 tgggtgccatgtcaaccaagactaagtcaaaagtggtcttggg------ggccaaaactgccaaagattcaatacatagggggctgttttgtattttaat 41368634  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattata 213  Q
    || |||| ||||||||||| |||| |||| ||||||| |  | ||||||| |||||||||| | ||||||    
T  41368635 tagttagggggccaaaatcacaacttttggaaagatatgaggtcaaaagtgcaattaagccaaaattata 41368704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 205
Target Start/End: Original strand, 36624073 - 36624224
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatacga---gtgcttttttgtattt-aatta 145  Q
    |||||||||||||||||||||||||||||| |||  |||||||      | ||||||| |||||| |||||||     | ||| |||||||||| |||||    
T  36624073 ggtgccacgtcagcgaagactaagtcaaaaatggcattggggg------ccaaaactgtcaaagatccaatacatacggggctgttttgtattttaatta 36624166  T
Q  146 tttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
     |||| ||||||||||| |||| ||||||||||||||| ||||||| | |||||||||||    
T  36624167 gttag-gggccaaaatcgcaacttttgaaaagataggg-gccaaaaatgcaattaagcct 36624224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 8038224 - 8038265
Alignment:
Q  52 tgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  8038224 tgccacgtcagcgaagactaagtcaaaagtggtcttaggggt 8038265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23389848 - 23389799
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgg 50  Q
    |||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  23389848 acgtggcatccataatggtcgacatgtgacacctcacttaaggaatatgg 23389799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 206
Target Start/End: Complemental strand, 18621874 - 18621719
Alignment:
Q  49 gggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaatt 144  Q
    |||||||||||| ||||||||||||||||||||||  |||||      ||| ||||||| |||||| |||||||   | | | | ||||||| |||||||    
T  18621874 gggtgccacgtcggcgaagactaagtcaaaagtggctttggg------ggccaaaactgtcaaagatccaatacatagggggttgttttgtattttaatt 18621781  T
Q  145 atttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    | |||| | ||||||||| |||| |||  ||||||||||  |||||||| ||||||||||||    
T  18621780 agttagggagccaaaatcgcaacttttagaaagataggggaccaaaagtgcaattaagccta 18621719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 32498567 - 32498611
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||    
T  32498567 tgggtgccacatcagcaaagactaagtcaaaagtggtcttggggg 32498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 13229476 - 13229429
Alignment:
Q  46 tatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  13229476 tatgggtgccacgtcagcgaatactaagtcaaaagtggccttaggggt 13229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 34608540 - 34608575
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  34608540 tgggtgccacgtcagcgaagactaagtcaaaagtgg 34608575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 6335567 - 6335649
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattat 212  Q
    |||||||||||| ||| |||| || ||| |||| |||| |||||||||||||||  |||||||| ||||||||||||| ||||    
T  6335567 ttttgtatttaaattagttaggggtccataatcgcaacttttgaaaagataggggtccaaaagtgcaattaagcctattttat 6335649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 42260294 - 42260252
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  42260294 ggtgccaagtcagcgaagactaagtcaaaaatggtcttggggg 42260252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31947996 - 31948041
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggat 46  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||    
T  31947996 acgtggtacccacaatggtcgacacgtggcacctcacttaagggat 31948041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 38701868 - 38701975
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| ||||||| |||||||| ||  |||||||||||| |||| ||||||||||||||| | ||||||| ||    
T  38701868 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagtt--agggccaaaatcgcaacttttgaaaagataggg-gtcaaaagtgca 38701964  T
Q  197 attaagcctat 207  Q
    |||||||||||    
T  38701965 attaagcctat 38701975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 37639581 - 37639501
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||||||| ||| |||  || |||||| |||||| |||||||||||||||  |||||||| ||||||||||| ||||    
T  37639581 ttttgtatttaaattagttaagggtccaaaacctcaacttttgaaaagataggggtccaaaagtgcaattaagcctttatt 37639501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 42260322 - 42260366
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||| |||||||||||||||||||||||||  |||||||    
T  42260322 tgggtgccacatcagcgaagactaagtcaaaagtggcattggggg 42260366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 16982772 - 16982815
Alignment:
Q  49 gggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||    
T  16982772 gggtgccacgtcagcgtagactaagtcaaaattggccttggggg 16982815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 39616790 - 39616869
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatat 209  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| |||||||||||||||    
T  39616790 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatat 39616869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 414894 - 414976
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattat 212  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||| ||||    
T  414894 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctattttat 414976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 5548014 - 5547980
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    |||||| ||||||||||||||||||||||||||||    
T  5548014 tgggtgtcacgtcagcgaagactaagtcaaaagtg 5547980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 9878424 - 9878359
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||| |||| ||||||||||| |||| |||||||| |||||| ||||||| | ||||||||||    
T  9878424 tttaattaattag-gggccaaaatcgcaacttttgaaaatatagggggccaaaaatgcaattaagcc 9878359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 32164989 - 32164947
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggg 90  Q
    |||||||||||||| | |||||||| |||||||||||||||||    
T  32164989 tgggtgccacgtcaacaaagactaaatcaaaagtggtcttggg 32164947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 42906613 - 42906691
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctata 208  Q
    |||||||||||| ||| ||||||| ||| || | |||| |||| ||||||||||  |||||||| ||||||||||||||    
T  42906613 ttttgtatttaaattagttagaggtccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctata 42906691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 23389835 - 23389872
Alignment:
Q  46 tatgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  23389835 tatggatgccacgtcagcgaagactaaatcaaaagtgg 23389872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 41015030 - 41015107
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||| ||| |||| |||||| || | |||| |||||||||||||||  |||||||| ||||||| |||||    
T  41015030 ttttgtatttaaattagttagggggccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaaacctat 41015107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 995067 - 994987
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||| ||||    
T  995067 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagcctttatt 994987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 6014493 - 6014417
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  6014493 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 6014417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 6107157 - 6107109
Alignment:
Q  164 caacatttgaaaagatagggtgccaaaagtacaattaagcctatattat 212  Q
    |||| |||| ||||||||||  |||||||| ||||||||||||||||||    
T  6107157 caacttttggaaagataggggtccaaaagtgcaattaagcctatattat 6107109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 20504553 - 20504630
Alignment:
Q  10 ccacaatggtcgacatgtgacacctcacttaagggata----tgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    |||||||||| |||| |||||||||||||||| ||||     ||| || ||||||||| || ||||||||||||||||    
T  20504553 ccacaatggttgacacgtgacacctcacttaaaggatggatgtggatgtcacgtcagcaaaaactaagtcaaaagtgg 20504630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 27339617 - 27339537
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||||||| ||| |||| || ||| || | |||| ||| |||||||||||  |||||||| ||||||||||||||||    
T  27339617 ttttgtatttaaattagttaggggtccataaccgcaacttttaaaaagataggggtccaaaagtgcaattaagcctatatt 27339537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 34608618 - 34608693
Alignment:
Q  131 ttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||| ||||| |||| ||||||||||| |||| ||| |||||||| || | ||||||| ||||||||||||    
T  34608618 ttttgtattttaattagttagggggccaaaatcgcaacttttaaaaagatatgg-gtcaaaagtgcaattaagccta 34608693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 37953448 - 37953372
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  37953448 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 37953372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 42267530 - 42267454
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  42267530 ttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtgcaattaagccta 42267454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 45106509 - 45106433
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  45106509 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 45106433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 1712571 - 1712369
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||| |||||| |||||||||||| |||||||||||||| ||||| |||     ||||    
T  1712571 acgtggcacccacaatggtcgacacgtagcacctcacttaagggatttgggtgtcacgtcagcgaatactaagtcaaaagt-gtctttggg-----ggct 1712478  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| ||||||| |||||||| |||||||||||||||| |||| ||||||||||||||| | ||||||| ||    
T  1712477 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagagggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgca 1712378  T
Q  197 attaagcct 205  Q
    |||||||||    
T  1712377 attaagcct 1712369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21931900 - 21932101
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||  |||||      |||     
T  21931900 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatatgggtgccacgtcaacgaagactaagttaaaagtggcattggg------ggcc 21931993  T
Q  101 aaaactgccaaagagccaatac----gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtac 195  Q
    |||||||||||||| |||||||    ||| ||| ||||||| |||||||| |||| ||||||||||| |||| ||||||||||||||| || |||||| |    
T  21931994 aaaactgccaaagatccaatacataggag-gctgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagggggcaaaaagtgc 21932092  T
Q  196 aattaagcc 204  Q
    |||||||||    
T  21932093 aattaagcc 21932101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 16149858 - 16150059
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||      |||     
T  16149858 acgtggcacccataatggtcgacacgtgacacctcacttaagggatgtgggtgccacgtcagcgaatactaagtcaaaagtggtcttggg------ggca 16149951  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||| |  ||||||   ||| ||| ||||||| ||||| || |||| ||||||||||| |||  ||||||||||||| | ||||||||| ||    
T  16149952 aaaactgccaaatattcaatacatagagggctgttttgtattttaagtagttagggggccaaaatcgcaatttttgaaaagatagag-gccaaaagtgca 16150050  T
Q  197 attaagcct 205  Q
    |||||||||    
T  16150051 attaagcct 16150059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 51195795 - 51195991
Alignment:
Q  4 tggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaa 103  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||      ||| |||    
T  51195795 tggcacccacaatggttgacacgtggcacctcacttaagggatatgggtgccatgtcagcgaagactaagtcaaaagtggtcttggg------ggccaaa 51195888  T
Q  104 actgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaatt 199  Q
    ||||||||||| |||||||   | | ||| ||||||| |||||||| |||  ||||||||||| |||  ||||||||||||||| ||||||| | |||||    
T  51195889 actgccaaagatccaatacatagggggctgttttgtattttaattagttaaggggccaaaatcacaatttttgaaaagataggg-gccaaaaatgcaatt 51195987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 15911873 - 15911671
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||| |||||||||||||  || ||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||      |||     
T  15911873 acgtggcacctacaatggtcgacacatggcacctcacttaagggatgtgggtgccacgttagcgaaaactaagtcaaaagtggtcttggg------ggcc 15911780  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | |  || ||||||| |||| ||| |||| |||| |||||| |||| ||||||||||||||| ||||||||| ||    
T  15911779 aaaactgccaaagatccaatacataggggactgttttgtattttacttagttagggggcaaaaatcgcaacttttgaaaagatagggggccaaaagtgca 15911680  T
Q  197 attaagcct 205  Q
    |||||||||    
T  15911679 attaagcct 15911671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 22182528 - 22182727
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||      |||     
T  22182528 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggcattggg------ggcc 22182621  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||| |||||||||| |||||||    || | | ||||||| |||||||| |||| ||||||||||| |||| ||| ||||||||||  ||||||||| ||    
T  22182622 aaagctgccaaagatccaatacataaagggatgttttgtattttaattagttagggggccaaaatcgcaacttttaaaaagatagg--gccaaaagtgca 22182719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 37696447 - 37696252
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       ||| ||    
T  37696447 gtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagttaaaagtggtcttgg-------ggccaa 37696355  T
Q  103 aactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaat 198  Q
    ||||| |||||| |||||||   | | ||| ||||||| |||||||| | || | | |||||||  ||| ||||||||||||||| ||||||||||||||    
T  37696354 aactgtcaaagatccaatacatagggggctgttttgtattttaattagtcagggagtcaaaatcgtaacttttgaaaagatagggggccaaaagtacaat 37696255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 52201507 - 52201599
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  52201507 acgtggcacccacaatggtcgacacgtggcacctcctttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggtcttgagggt 52201599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16318868 - 16318777
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  16318868 acgtggcacccacaattgtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagttaaaagtggccttggggg 16318777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 26064102 - 26063921
Alignment:
Q  21 gacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgcc-aaagagccaa 119  Q
    |||| ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||      ||| ||||||||| ||||| ||||    
T  26064102 gacacgtggcacctgacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggtcttggg------ggccaaaactgccaaaagatccaa 26064009  T
Q  120 tac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||   | | ||| ||||||| |||||||| |||| ||||||||||| |||| || |||||||||||| ||||||||| ||||||||||    
T  26064008 tacatagggggctgttttgtattttaattagttagggggccaaaatcacaactttcgaaaagataggg-gccaaaagtgcaattaagcc 26063921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 26932784 - 26932582
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||  || |||||||||||||||||||||||||||||||||||| ||||||      | |     
T  26932784 acgtggcacccacaatggtcgacacgtggcacctcacttaagatatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttggg-----tgcca 26932690  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||||| |||||| |||||||   ||   || ||||||| |||||||| |||  || |||||||| |||| ||||||||||||||| | ||||||| ||    
T  26932689 aaaactgtcaaagatccaatacatagatgactgttttgtattttaattagttatgggaccaaaatcgcaacttttgaaaagataggg-gtcaaaagtgca 26932591  T
Q  197 attaagcct 205  Q
    |||||||||    
T  26932590 attaagcct 26932582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 29153337 - 29153541
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| | | |||||||||| ||||||||  ||        
T  29153337 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagattcattcaaaagtggccttgggggacaa---- 29153432  T
Q  101 aaaactgccaaagagccaatac----gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtac 195  Q
      ||||| || ||| |||| ||    | | ||| |||||||||| ||||| ||||||| |||||||| |||| |||||||||||||||  ||||||||      
T  29153433 --aactgtcatagatccaaaacataggggggctgttttgtattttaattagttagagg-ccaaaatcgcaacttttgaaaagataggggaccaaaagtga 29153529  T
Q  196 aattaagcctat 207  Q
    ||||||||||||    
T  29153530 aattaagcctat 29153541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36196960 - 36197050
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggg 91  Q
    |||||||||| ||||||||| ||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  36196960 acgtggcaccaacaatggtcaacacgtggcacctcacttaagggatgtgcgtgccacgtcagcgaagactaagtcaaaagtggccttgggg 36197050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7159648 - 7159739
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||| |||||||||||| |||||||||||||  |||||||    
T  7159648 acgtggcacccacaatggtcgacacgtggcacctcaattaagggatgtgggtgccatgtcagcgaagaccaagtcaaaagtggctttggggg 7159739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 207
Target Start/End: Original strand, 6912329 - 6912497
Alignment:
Q  38 ttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgctttttt 134  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||| |||||      |||| |||||||||||||| |||||||   | | ||| ||||    
T  6912329 ttaagggatgtgggtgccacatcagcgaagactaagtcaaaagtggccttgg------aggccaaaactgccaaagatccaatacatagggggctgtttt 6912422  T
Q  135 gta--tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||  |||||||| ||||  |||||||||| |||| ||| ||||||||||| ||||||||| ||||||| |||||    
T  6912423 gtatttttaattagttaggaggccaaaatcgcaacttttcaaaagatagggggccaaaagtgcaattaaacctat 6912497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 19968396 - 19968598
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| || ||||||||||||||| ||| ||||||||||||||||| || ||||||||||||| || ||||||||||||||||  |||||      ||||    
T  19968396 acgtgacatccacaatggtcgacacgtggcacctcacttaagggatgtgagtgccacgtcagcaaaaactaagtcaaaagtggcattggg------ggct 19968489  T
Q  101 aaaactgccaaagagccaatac--gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaa 197  Q
    ||||||| |||| | |||||||    | ||| ||||||| |||||||| ||||  |||||||||| |||| |||||||||||| || |  |||||| |||    
T  19968490 aaaactgtcaaaaatccaatacatatgagctattttgtattttaattacttaggaggccaaaatcacaacttttgaaaagatatggagtgaaaagtgcaa 19968589  T
Q  198 ttaagccta 206  Q
    |||||||||    
T  19968590 ttaagccta 19968598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 52201518 - 52201365
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    ||||||||||||||||||||||||||||||||||||||||||       | | |||||||||||||| |||||||   | | | | ||||||| ||||||    
T  52201518 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgg-------gaccaaaactgccaaagatccaatacatagggggttgttttgtattttaat 52201426  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    || |||| ||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||    
T  52201425 tagttagggggccaaaatcgcaacttttgaaaagataggg-gccaaaagtgcaattaagcct 52201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 52254644 - 52254720
Alignment:
Q  12 acaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttg 88  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  52254644 acaatggtcgacacgtggcacctcacttaagggatatgggcgccacgtcagcgaagactaggtcaaaagtggccttg 52254720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 13344297 - 13344491
Alignment:
Q  10 ccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgcc 109  Q
    |||||||||| |||| ||| ||||||||||||||||| |||||| || |||||| |||||||||| |||||||||||||||      ||| ||||||| |    
T  13344297 ccacaatggttgacacgtggcacctcacttaagggatgtgggtgtcatgtcagcaaagactaagttaaaagtggtcttggg------ggccaaaactgtc 13344390  T
Q  110 aaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||  ||||||   | | | | ||||||| |||||||| |||| || |||||||| |||| |||||||| |||||| ||||||||| ||||||| |||    
T  13344391 aaagattcaatacatagggggttgttttgtattttaattagttaggggaccaaaatcgcaacttttgaaaaaatagggggccaaaagtgcaattaaacct 13344490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 24183252 - 24183173
Alignment:
Q  4 tggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||| || |||||||||||||    
T  24183252 tggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacatcagcgaaaaccaagtcaaaagtgg 24183173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 213
Target Start/End: Complemental strand, 28731520 - 28731341
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac-gagtg- 127  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||       |||||||||||||| |||||||  || |     
T  28731520 cacctcacttaagggatgtgggtgctacgtcagcgaagactaagtcaaaagtggcattgggggt------caaaactgccaaagatccaatacttaggga 28731427  T
Q  128 cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattata 213  Q
     || | |||| |||||||| |||| ||||||||||   ||| ||||||||||||||| |||||||||||||||||| ||| ||||||    
T  28731426 gttgtctgtattttaattagttagggggccaaaattaaaacttttgaaaagataggg-gccaaaagtacaattaagtctaaattata 28731341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 19893025 - 19893221
Alignment:
Q  9 cccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgc 108  Q
    ||||||||||||||||  || ||||||||||||||||| | |||| |||||||||| |||||||||||||||||   ||||||     ||| |||||||     
T  19893025 cccacaatggtcgacacatggcacctcacttaagggatgtaggtgtcacgtcagcgtagactaagtcaaaagtgacattgggg-----ggcaaaaactgt 19893119  T
Q  109 caaagagccaatac--gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||| |||||||    | ||| ||||||| |||||||||||| |||||||||||  |||| |||||||||||| || | ||||| | ||||||| |||    
T  19893120 caaagatccaatacataggggctgttttgtattttaattatttaaagggccaaaattgcaacttttgaaaagataagggggcaaaaatgcaattaaacct 19893219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 35544944 - 35544743
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| |||||||||||| ||||| ||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||||| | ||||       |||     
T  35544944 acgtgacacccacaatggccgacacgtggcacctcacttaagggatgtgggtgtcacgtcagcgaagactgagtcaaaagtgatattgg------cggcc 35544851  T
Q  101 aaaactgccaaagagcca--atacgagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaa 197  Q
    |||||||| ||||| |||  |||   | ||| ||||||| |||||||| |||| | ||||||||| |||| ||||||||||||||| || |||||| | |    
T  35544850 aaaactgcaaaagatccaatatataggggctattttgtattttaattagttag-gagccaaaatcgcaacttttgaaaagatagggggctaaaagtgcga 35544752  T
Q  198 ttaagccta 206  Q
    |||||||||    
T  35544751 ttaagccta 35544743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 6606642 - 6606535
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||||||||||||  ||||||   ||| ||| |||||||||| ||||| |||||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  6606642 aaaactgccaaagattcaatacatagagggctgttttgtattttaattagttagagggccaaaatcacaacttttgaaaagataggg-ggcaaaagtaca 6606544  T
Q  197 attaagcct 205  Q
    |||||||||    
T  6606543 attaagcct 6606535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 41003746 - 41003684
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||||||||| |||||||||    
T  41003746 cacctcacttaagggatgtggttgtcacgtcagcgaagactaagtcaaaagtgatcttggggg 41003684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 15911864 - 15912016
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aatta 145  Q
    |||||||||||||||||||||||||||||||| |  ||||      |||| |||||||||||||| ||||||    | | ||| |||||||||| |||||    
T  15911864 ggtgccacgtcagcgaagactaagtcaaaagtagctttgg------aggccaaaactgccaaagatccaatatatagggggctgttttgtattttaatta 15911957  T
Q  146 tttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
     |||| ||||||||||| |||| |||||||| |||||| | ||||||| ||||||||||    
T  15911958 gttagggggccaaaatcgcaacttttgaaaaaatagggggtcaaaagtgcaattaagcc 15912016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 26932773 - 26932923
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    ||||||||||||||||||||||||||| |||||||| |||||       ||  |||||||||||||| |||||||   | | | | ||||||| ||||||    
T  26932773 tgggtgccacgtcagcgaagactaagttaaaagtggccttgg-------ggtcaaaactgccaaagatccaatacatagggggttgttttgtattttaat 26932865  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    || ||| |||||||||||| |||| |||| |||||||||| ||||||||| |||||||    
T  26932866 tagttaaagggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaa 26932923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 29153348 - 29153196
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaata---cgagtgcttttttgta-tttaat 143  Q
    |||||||||||||||||||||||||||||||||||| |||||      |||| ||||||| |||||| ||||||    | | ||| ||||||| ||||||    
T  29153348 tgggtgccacgtcagcgaagactaagtcaaaagtggccttgg------aggccaaaactgtcaaagatccaatatatagggggctgttttgtattttaat 29153255  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    || |||| ||| ||||||| |||| ||||| ||||||| | ||||||||| ||||||||    
T  29153254 tagttaggggggcaaaatcgcaacttttgagaagatagagggccaaaagtgcaattaag 29153196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 46039040 - 46039195
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aat 143  Q
    |||||| || |||||||||||| ||||||||||||||||||||||      | ||||||||||||||  ||| ||   ||| | | |||||||||| |||    
T  46039040 tgggtgtcatgtcagcgaagaccaagtcaaaagtggtcttggggg------ccaaaactgccaaagattcaacacatagagggttattttgtattttaat 46039133  T
Q  144 tatttag-agggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    || |||| |||||||||||| |||| ||| ||||||||||| ||||||||| ||||||||||    
T  46039134 taattaggagggccaaaatcgcaacttttaaaaagatagggggccaaaagtgcaattaagcc 46039195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 204
Target Start/End: Complemental strand, 52254637 - 52254490
Alignment:
Q  55 cacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttag 150  Q
    ||||||||||||||||||||||||||||||||||||      |||||||| || |||||| |||||||   | | ||| ||||||| |||||||| ||||    
T  52254637 cacgtcagcgaagactaagtcaaaagtggtcttggg------ggctaaaagtgtcaaagatccaatacatagggggctgttttgtattttaattagttag 52254544  T
Q  151 agggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||||||| |||  |||  ||||||||||   ||||||| ||||||||||    
T  52254543 agggccaaaatcgcaatttttagaaagataggggatcaaaagtgcaattaagcc 52254490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 35580871 - 35580737
Alignment:
Q  69 ctaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctc 164  Q
    ||||||||||||||||||||||||      | |||||||||||||| |||||||   | | ||| |||||||||| ||||| |||  ||||||||||| |    
T  35580871 ctaagtcaaaagtggtcttggggg------ccaaaactgccaaagatccaatacatagggggctgttttgtattttaattaattacggggccaaaatcgc 35580778  T
Q  165 aacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||| |||| |||||||||| ||||||||| |||||||||||    
T  35580777 aacttttggaaagatagggggccaaaagtgcaattaagcct 35580737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 48826242 - 48826304
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||||| ||| ||||||||    
T  48826242 cacctcacttaaggaatgtgggtgccacgtcagcgaaaactaagtcaaaaatggccttggggg 48826304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 206
Target Start/End: Original strand, 35580870 - 35580984
Alignment:
Q  96 aggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaa 191  Q
    |||| |||||||||||||| |||||||   | | ||| |||||||||| ||||| ||||  |||||||||| |||| |||||||| |||||| |||||||    
T  35580870 aggccaaaactgccaaagatccaatacatagggggctgttttgtattttaattagttaggaggccaaaatcgcaacttttgaaaaaatagggggccaaaa 35580969  T
Q  192 gtacaattaagccta 206  Q
    || ||||||||||||    
T  35580970 gtgcaattaagccta 35580984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 37696438 - 37696595
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    |||||||||| | |||||||||||||||||||||||  |||||      ||| |||||||||||| | |||||||   ||||||| |||| || ||||||    
T  37696438 tgggtgccaccttagcgaagactaagtcaaaagtggctttggg------ggccaaaactgccaaatatccaatacatagagtgctgttttttattttaat 37696531  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    || |||   |||||||||  |||| |||||||| |||||| ||||||||| | |||||||||||    
T  37696532 tagttatgaggccaaaattgcaacttttgaaaatatagggggccaaaagtgcgattaagcctat 37696595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 16149871 - 16149826
Alignment:
Q  46 tatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggg 91  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  16149871 tatgggtgccacgtcagcgaagattaagtcaaaagtggttttgggg 16149826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 26811519 - 26811451
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| ||||  |||||||||| |||| ||||||||||||||| | ||||||| ||||||||||||    
T  26811519 tttaattagttaggaggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagccta 26811451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 46038966 - 46038898
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| |||||||||||  ||| ||||||||||||||| ||||||||| ||||||| ||||    
T  46038966 tttaattagttagggggccaaaatcgtaacttttgaaaagatagggggccaaaagtgcaattaaaccta 46038898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 16318857 - 16318892
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  16318857 tgggtgccacgtcagcgaagactaagtcaaaagtgg 16318892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 7764442 - 7764496
Alignment:
Q  152 gggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    ||||||||||  |||| ||||||||||||||| ||||||||| ||||||||||||    
T  7764442 gggccaaaattgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 7764496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 22182539 - 22182505
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    |||||||||||||||||||||||||||||||||||    
T  22182539 tgggtgccacgtcagcgaagactaagtcaaaagtg 22182505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 214
Target Start/End: Complemental strand, 6809142 - 6809058
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattataa 214  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||||| |||||    
T  6809142 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagcctataatataa 6809058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 20224315 - 20224391
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||||||||||||||||    
T  20224315 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtacaattaagccta 20224391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 21697121 - 21697188
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| ||||||||||| |||| ||||||||||||||| | ||||||| ||||| ||||||    
T  21697121 tttaattagttagggggccaaaatcacaacttttgaaaagataggg-gtcaaaagtgcaattgagccta 21697188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 21931911 - 21931867
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||    
T  21931911 tgggtgccacgtcagcaaagactaagtcaaaagtggcctttgggg 21931867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 35544933 - 35544977
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||    
T  35544933 tgggtgtcacgtcagcgaagactaaatcaaaagtggtattggggg 35544977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 46351483 - 46351539
Alignment:
Q  151 agggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||  |||| |||||||||||||||  |||||||| |||||||||||||    
T  46351483 agggccaaaattgcaacttttgaaaagataggggaccaaaagtgcaattaagcctat 46351539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 51462258 - 51462179
Alignment:
Q  127 gcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||||| ||||| ||||||| |||||||| |||| | |  ||| |||||| ||||||||||||||||||||||    
T  51462258 gcttttttgtattttaattagttagaggtccaaaatcgcaacttcttgaaacataggg-gccaaaagtacaattaagccta 51462179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 6606947 - 6607010
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    |||||||| |||| ||||||||||| |||| |||||||| ||| || | |||||||||||||||    
T  6606947 tttaattagttagggggccaaaatcgcaacttttgaaaaaataaggggtcaaaagtacaattaa 6607010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 41611307 - 41611244
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    |||||||| |||| ||||||||||| |||| |||| ||| |||||| ||||||||| |||||||    
T  41611307 tttaattagttagggggccaaaatcgcaacttttggaaaaatagggggccaaaagtgcaattaa 41611244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 46039045 - 46039006
Alignment:
Q  7 cacccacaatggtcgacatgtgacacctcacttaagggat 46  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  46039045 cacccacaatggtcgacacgtggcacctcacttaagggat 46039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 50503808 - 50503699
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   ||| ||| |||||||||| ||||| |||| ||||||||||| |||| | | |||| ||||||  ||||||||  |    
T  50503808 aaaactgccaaagatccaatacatagagggctgttttgtattttaattagttagggggccaaaatcgcaacttcttaaaacataggggaccaaaagtgaa 50503709  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  50503708 attaagccta 50503699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 8029034 - 8028952
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattat 212  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||| ||||    
T  8029034 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagcctattttat 8028952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 48332878 - 48332912
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    |||||| ||||||||||||||||||||||||||||    
T  48332878 tgggtgtcacgtcagcgaagactaagtcaaaagtg 48332912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 19968400 - 19968363
Alignment:
Q  55 cacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  19968400 cacgtcagcgaagactaagtcaaaagcggtctttgggg 19968363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 45885022 - 45884945
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||||    
T  45885022 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctat 45884945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 50591608 - 50591555
Alignment:
Q  153 ggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||| |||| |||| ||||||| || ||||||||| ||||||||||||    
T  50591608 ggccaaaatcgcaacttttggaaagataaggggccaaaagtgcaattaagccta 50591555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 5225290 - 5225222
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| ||||||||||| |||  |||| |||||||||| |||||| || ||||||| ||||    
T  5225290 tttaattagttagggggccaaaatcacaatttttggaaagatagggagccaaatgtgcaattaaaccta 5225222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 5225599 - 5225671
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||| |||| ||||||||||| |||| || | ||||||||||  |||||||| ||||||| ||| ||||    
T  5225599 tttaattagttagggggccaaaatcacaactttaggaaagatagggatccaaaagtgcaattaaacctttatt 5225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 22204379 - 22204303
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  22204379 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 22204303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 23342038 - 23341962
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  23342038 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 23341962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 36196969 - 36196937
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    |||||||||||| ||||||||||||||||||||    
T  36196969 ggtgccacgtcaacgaagactaagtcaaaagtg 36196937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 43914819 - 43914895
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  43914819 ttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtgcaattaagccta 43914895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 45664379 - 45664455
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| ||||||||||||    
T  45664379 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 45664455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 47430088 - 47430160
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||| |||| || |||||||| |||| ||||||||||||| | ||||||| | ||||||| ||| ||||    
T  47430088 tttaattaattaggggaccaaaatcgcaacttttgaaaagatagagcgccaaaaatgcaattaaacctttatt 47430160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 9592272 - 9592444
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagt 126  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||| |||||||   | |     
T  9592272 cacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt------taaaactgccaaagatccaatacataggga 9592365  T
Q  127 gcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    ||| ||||||| |||||||| ||||| |||||||||| |||| ||||||||||||||| ||||||||| ||||||||||    
T  9592366 gctgttttgtattttaattagttagaaggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 9592444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 50073408 - 50073611
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||      |||     
T  50073408 acgtggcacccacaatgatcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactatgtcaaaagtggtcttggg------ggcc 50073501  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| ||||||| |||||||| ||||||| |||||||| |||| ||| |||||||| ||  |||||||| ||    
T  50073502 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagaggaccaaaatcgcaacttttaaaaagataagggaccaaaagtgca 50073601  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  50073602 attaagccta 50073611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 201
Target Start/End: Original strand, 19725736 - 19725933
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||      ||| ||    
T  19725736 gtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggccaa 19725829  T
Q  103 aactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaaga-tagggtgccaaaagtacaa 197  Q
    || ||||||||| |||||||   ||  ||||||||||| |||||||| |||| ||||||||||| |||| |||||||||| | ||| ||||||||| |||    
T  19725830 aaatgccaaagatccaatacatagatggcttttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagattggggagccaaaagtgcaa 19725929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 36413880 - 36413679
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||   |||||      |||     
T  36413880 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatatgggtgccacgtcagcgcagactaagttaaaagtgactttggg------ggcc 36413787  T
Q  101 aaaactgccaaagagccaata---cgagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||||||||||||  |||||    | | ||| ||||||| |||||||| |||||||||||||||| |||| |||||||||||||||||| |||||| ||    
T  36413786 aaaactgccaaagattcaataaatagggggctgttttgtattttaattagttagagggccaaaatcgcaacttttgaaaagatagggtgcaaaaagtgca 36413687  T
Q  197 attaagcc 204  Q
    ||||||||    
T  36413686 attaagcc 36413679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 2016456 - 2016249
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||||||||||||| ||||||||  || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||      |||     
T  2016456 acgtggcacccacaaaggtcgacacatggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggcattggg------ggcc 2016363  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||| | |||||||   ||| ||| ||||||| |||||||| ||||| | |||||||  |||| ||||||||||||||| ||||||||| ||    
T  2016362 aaaactgccaaatatccaatacatagagggctgttttgtattttaattagttagatgaccaaaattgcaacttttgaaaagatagggggccaaaagtgca 2016263  T
Q  197 attaagcctatatt 210  Q
    ||||||||| ||||    
T  2016262 attaagcctttatt 2016249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 1186801 - 1187001
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||      |||     
T  1186801 acgtggcacccacaatggtcgacatgtggcacctcacttaagggatgtgggtgtcacgtcagcgaagactaagtcaaaagtggccttggg------ggcc 1186894  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||| ||||||||| |||||||   | | | | ||||||| |||||||| |||| || |||||||  |||| ||||||||||||||| ||||||||| ||    
T  1186895 aaaattgccaaagatccaatacatagggggttgttttgtattttaattagttaggggaccaaaat-gcaacttttgaaaagatagggggccaaaagtgca 1186993  T
Q  197 attaagcc 204  Q
    ||||||||    
T  1186994 attaagcc 1187001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 9119602 - 9119398
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||      |||     
T  9119602 acgtggcacccacaatagtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggcattggg------ggcc 9119509  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||||| |||||| |||||||   | | | | ||||||| |||||||| |||||||||||||||| |||| |||||||||||  || | ||||||| ||    
T  9119508 aaaactgtcaaagatccaatacatagggggttgttttgtattttaattagttagagggccaaaatcgcaacttttgaaaagatttggagtcaaaagtgca 9119409  T
Q  197 attaagcctat 207  Q
    |||||||||||    
T  9119408 attaagcctat 9119398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 10726103 - 10725907
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||  |||||      ||| ||    
T  10726103 gtggcacccacaatggtcgacatgtggcacctcacttaagggatgtgggtgccaagtcagcgaagactaagtctaaagtggcattggg------ggccaa 10726010  T
Q  103 aactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaat 198  Q
    |||||||||||| |||||||   ||| | | ||||||| |||||||| |||| ||||||||||  |||| ||| ||||||||||| ||||||||| ||||    
T  10726009 aactgccaaagatccaatacatagagggttgttttgtattttaattaattagggggccaaaattgcaacttttaaaaagatagggagccaaaagtgcaat 10725910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 10939872 - 10939676
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||  |||||      ||| ||    
T  10939872 gtggcacccacaatggtcgacatgtggcacctcacttaagggatgtgggtgccaagtcagcgaagactaagtctaaagtggcattggg------ggccaa 10939779  T
Q  103 aactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaat 198  Q
    |||||||||||| |||||||   ||| | | ||||||| |||||||| |||| ||||||||||  |||| ||| ||||||||||| ||||||||| ||||    
T  10939778 aactgccaaagatccaatacatagagggttgttttgtattttaattaattagggggccaaaattgcaacttttaaaaagatagggagccaaaagtgcaat 10939679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 206
Target Start/End: Original strand, 23777179 - 23777379
Alignment:
Q  4 tggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaa 103  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||      ||| |||    
T  23777179 tggcacccacaatggtcgacacgtggcacctcaattaagggatgtgggtgccacgtcaacgaagactaagtcaaaagtggccttggg------ggccaaa 23777272  T
Q  104 actgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaatt 199  Q
    ||||||||||| |||||||     | ||| ||||||| |||||||| |||||||||||||||| |||| |||||||||||| || | ||||||  |||||    
T  23777273 actgccaaagatccaatacataaggggctgttttgtattttaattagttagagggccaaaatcgcaacttttgaaaagataaggggtcaaaagagcaatt 23777372  T
Q  200 aagccta 206  Q
    |||||||    
T  23777373 aagccta 23777379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 40919441 - 40919241
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||       |||     
T  40919441 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatttgggtgtcacgtcaacgaagactaagtcaaaagtgatcttgg-------ggcc 40919349  T
Q  101 aaaactgccaaagagccaatac-gagtg--cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||  ||||  || ||||||| |||||||| |||| ||| |||||||  ||| ||||||||||||||  ||||||||| ||    
T  40919348 aaaactgccaaagatccaatacatagtggactgttttgtattttaattagttagggggtcaaaatcgtaacttttgaaaagataggtggccaaaagtgca 40919249  T
Q  197 attaagcc 204  Q
    ||||||||    
T  40919248 attaagcc 40919241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 51240184 - 51239985
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||      |||     
T  51240184 acgtggcacccacaatggtcgacacgtggcacctcatttaagggatgtgggtgccacgtcagcgaagattaagtcaaaagtggccttggg------ggcc 51240091  T
Q  101 aaaactgccaaagagccaatac--gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaa 197  Q
    |||||||||||| | |||||||    | ||| ||||||| |||||||| |||| ||||||||||| |||  ||||||||||||||| | ||||||| |||    
T  51240090 aaaactgccaaatatccaatacatatgggctgttttgtattttaattagttag-gggccaaaatcgcaatttttgaaaagatagggggtcaaaagtgcaa 51239992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22589304 - 22589502
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| ||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||           
T  22589304 acgtgacactcacaatggtcgacacgtggcacctcacttaagggatatgggtgccacgtcagcgaagactatgtcaaaagtggtcttcggggt------c 22589397  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| ||||||| |||||||| |||| | || |||||| |||| |||  |||||||||| ||||||||| ||    
T  22589398 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagggagcaaaaatcgcaacttttagaaagatagggggccaaaagtgca 22589497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 18961984 - 18962074
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggg 91  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  18961984 acgtggcacccacaatggccgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttgggg 18962074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19956893 - 19956802
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||    
T  19956893 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagccaagactaagtcgaaagtggccttggggg 19956802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40489353 - 40489444
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  40489353 acgtggcacccacaatggtcgacacgtagcacctcacttaagggatatgggtgtcacgtcaacgaagactaagtcaaaagtggttttggggg 40489444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7472355 - 7472274
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7472355 acgtggcatccacaatggtcgacgtgtggcacctcacttaagggatatgggtgccacctcagcgaagactaagtcaaaagtg 7472274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 44120899 - 44121103
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||| |||||||  |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||  ||||       |||     
T  44120899 acgtggcacccacaatcgtcgacacatgacacctcacttaagggatgtgggagccacgtcagcgaagacgaagtcaaaagtggcattgg-------ggcc 44120991  T
Q  101 aaaactgccaaagagc-----caatacgagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagta 194  Q
    |||||||||||||| |     ||||| | | | | ||||||| |||||||| |||| ||| ||||||| |||| ||||||||||||||| |||||||||     
T  44120992 aaaactgccaaagatccaactcaataggggggttgttttgtattttaattagttagggggtcaaaatcgcaacttttgaaaagatagggggccaaaagtg 44121091  T
Q  195 caattaagccta 206  Q
     |||||||||||    
T  44121092 taattaagccta 44121103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 45904056 - 45904255
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||   ||||      |||     
T  45904056 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtggcacgtcagcgaagactaggtcaaaagtggctgtggg------ggcc 45904149  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| | |||||   | | ||| ||||||| |||||||| |||  ||||||||||  |||| ||||||||||||||  | ||||||| ||    
T  45904150 aaaactgccaaagatctaatacatagggggctgttttgtattttaattaattaaggggccaaaattgcaacttttgaaaagataggaggtcaaaagtgca 45904249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9695207 - 9695289
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  9695207 acgtggcatccacaatggtcgacacgtgacacttcacttaagggatgtgcgtgccacgtcagcgaagactaagtcaaaagtgg 9695289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 6289384 - 6289303
Alignment:
Q  11 cacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  6289384 cacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggcattggggg 6289303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 26858545 - 26858343
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||| |||  || ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||  || ||      |||     
T  26858545 acgtggcacccacaatggtcaacacatggcacctcacttaagggatgtaggtgccacgccagcgaagactaagtcaaaagtggctttcgg------ggcc 26858452  T
Q  101 aaaactgccaaagagccaatac----gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtac 195  Q
    |||||||| |||||  ||||||    ||| ||| ||||||| |||||||| |||| || |||||||| |||| ||| ||||||||||| ||||||||| |    
T  26858451 aaaactgctaaagattcaatacataggag-gctgttttgtattttaattagttaggggaccaaaatcgcaacttttaaaaagatagggggccaaaagtgc 26858353  T
Q  196 aattaagcct 205  Q
    ||||||||||    
T  26858352 aattaagcct 26858343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35023002 - 35022921
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    ||||| ||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  35023002 acgtgacacccacaatggtcgacttgtggcaccttacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtg 35022921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 41970162 - 41970075
Alignment:
Q  5 ggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||| ||| | | ||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  41970162 ggcacccacaatggtcgacacgtggcgcatcacttaagggatgtgggtgtcacgtcagcgaagactaagtcaaaagtggacttggggg 41970075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 18961995 - 18961847
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatacg--agtgcttttttgta-tttaatt 144  Q
    |||||||||||||||||||||||||||||||||||| ||| |||       | |||||||||||||| |||||||   || ||| ||||||| |||||||    
T  18961995 tgggtgccacgtcagcgaagactaagtcaaaagtgg-cttcggg-------ccaaaactgccaaagatccaatacataagggctgttttgtaatttaatt 18961904  T
Q  145 atttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    | ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  18961903 agttaggtggccaaaatcgcaacttttgaaaagatagggggccaaaagtacaattaa 18961847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 13209578 - 13209662
Alignment:
Q  7 cacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggg 91  Q
    ||||||||||||||||||  || ||||||| ||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||    
T  13209578 cacccacaatggtcgacacctggcacctcaattaagagatgtgggtgccacgtcagcgaagattaagtcaaaagtggccttgggg 13209662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 205
Target Start/End: Original strand, 24296651 - 24296814
Alignment:
Q  39 taagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttg 135  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||| |||||||    |   || |||||    
T  24296651 taagagatatgagtgccacgtcagcgaagactaagtcaaaagtggtcttggg------ggccaaaactgccaaagatccaatacataaaaaactgttttg 24296744  T
Q  136 ta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    || |||||||| |||| |||||| |||| |||| ||||||||||||||  | ||||||| |||||||||||    
T  24296745 tattttaattagttag-gggccagaatcgcaacttttgaaaagataggaggtcaaaagtgcaattaagcct 24296814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 50073419 - 50073268
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    ||||||||||||||||||||||||||||||||||| |||||||      ||| ||||||||||| || |||||||   ||| ||| ||||||| ||||||    
T  50073419 tgggtgccacgtcagcgaagactaagtcaaaagtgatcttggg------ggccaaaactgccaatgatccaatacatagag-gctgttttgtattttaat 50073327  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    || |||| ||| ||||||| |||| ||  ||||||||||| ||||||||| ||||||||    
T  50073326 tagttagggggtcaaaatcgcaactttaaaaaagatagggggccaaaagtgcaattaag 50073268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 40489364 - 40489212
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac--gagtgcttttttgta-tttaatt 144  Q
    ||||||||||||||||||||||||||||||||||||  |||||      ||| |||||||||||||| |||||||    | ||| ||||||| |||||||    
T  40489364 tgggtgccacgtcagcgaagactaagtcaaaagtggcattggg------ggccaaaactgccaaagatccaatacataggggctgttttgtattttaatt 40489271  T
Q  145 atttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    | |||| ||||||||||| |||| |||  |||||||||| || |||||| |||||||||    
T  40489270 agttagggggccaaaatcgcaacttttagaaagatagggggctaaaagtgcaattaagc 40489212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 19938497 - 19938298
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||      |||||| ||| |||||||||||||||||||| | |||||      |||     
T  19938497 acgtggcacccacaatgatcgacacgtggcacctcacttaaggga------tgccacctcaacgaagactaagtcaaaagtgattttggg------ggcc 19938410  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | | | ||||||| |||||||| |||| |||||||||||  ||| ||| ||||||||| | | ||||||| ||    
T  19938409 aaaactgccaaagatccaatacatagggggttgttttgtattttaattagttagggggccaaaatcgtaacttttaaaaagatagagggtcaaaagtgca 19938310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 12893210 - 12893278
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| ||||||||||  |||||||||||||||||||| ||||||||| ||||||||||||    
T  12893210 tttaattagttagggggccaaaattgcaacatttgaaaagatagggggccaaaagtgcaattaagccta 12893278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 44120910 - 44120759
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac--gagtg-cttttttgta-tttaat 143  Q
    |||||||||||||||||||||||||||||||||||| ||||||      ||| |||||||||||||    || ||    ||| || ||||||| ||||||    
T  44120910 tgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggccaaaactgccaaaggtttaaaacataggtgactgttttgtattttaat 44120817  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    || ||||||||||||||||  ||| ||||||||||||||| ||||||||| |||||||    
T  44120816 tagttagagggccaaaatcgtaacttttgaaaagatagggggccaaaagtgcaattaa 44120759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 1186812 - 1186651
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aat 143  Q
    |||||||||||| |||||||||||| ||||||||||  |||||||      | ||||||| |||||| ||||||    | | ||| |||||||||| |||    
T  1186812 tgggtgccacgttagcgaagactaaatcaaaagtggcattggggg------ccaaaactgtcaaagatccaatatatagggggctgttttgtattttaat 1186719  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatta 211  Q
    || |||| ||||||||||| |||| ||| ||||| ||||| ||||||||| ||||||||||| |||||    
T  1186718 tagttagggggccaaaatcgcaacttttaaaaagttagggggccaaaagtgcaattaagcctttatta 1186651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 34625091 - 34625279
Alignment:
Q  10 ccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgcc 109  Q
    ||||||||||||||| ||| |||||||||| ||| || ||| ||||||||| |||||||||||||||||||| | |||||      |||| |||||||||    
T  34625091 ccacaatggtcgacacgtggcacctcacttgagg-atgtggttgccacgtcggcgaagactaagtcaaaagttgccttgg------aggccaaaactgcc 34625183  T
Q  110 aaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    ||||| |||||||     | ||| ||||||| ||||||||  ||  ||| | ||||| |||| ||||||||||||||  ||||||||| |||||||    
T  34625184 aaagatccaatacatatggggctgttttgtattttaattagataaggggtcgaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaa 34625279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 10308506 - 10308557
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  10308506 cacctcacttaagggatatgggtgccacgtcagtgaagactaa-tcaaaagtg 10308557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 49869318 - 49869252
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| ||||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||    
T  49869318 tttaattagttagagg-ccaaaatcgcaacttttgaaaagatagggagccaaaagtgcaattaagcct 49869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 55732935 - 55733002
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| |||| ||||||||||| |||| ||| ||||||||||| ||||||||| |||||||||||    
T  55732935 tttaattagttagggggccaaaatcgcaacttttaaaaagatagggagccaaaagtgcaattaagcct 55733002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 19938486 - 19938641
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac----gagtgcttttttgta-tttaa 142  Q
    |||||||||||||||| ||||||||||||||||||| ||||||       || |||||||||||||| |||||||    ||| | | ||||||| ||||     
T  19938486 tgggtgccacgtcagcaaagactaagtcaaaagtggccttggg------agccaaaactgccaaagatccaatacataggag-gatgttttgtattttat 19938578  T
Q  143 ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||| |||| ||||||||||| |||||||| |||| |||||  | ||||||| |||||||||||    
T  19938579 ttagttagggggccaaaatcgcaacatttaaaaatataggaggtcaaaagtgcaattaagcct 19938641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 36945579 - 36945513
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||| |||| |||| |||||| |||| ||||||||||||||| ||||||||| ||||||||||    
T  36945579 tttaattagttagggggcaaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 36945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24886673 - 24886731
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtca 61  Q
    ||||| |||||||||||||||||| |  |||||||||||||||||| ||||||||||||||    
T  24886673 acgtgacacccacaatggtcgacacg--acacctcacttaagggatgtgggtgccacgtca 24886731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 36413869 - 36413910
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgg 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  36413869 tgggtgccacgtcagcgaagactaagtcaaacgtggtcttgg 36413910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 40919430 - 40919580
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||        ||||||| |||||| |||||||     | ||| ||||||| ||||||    
T  40919430 tgggtgccacgtcagcgaagactaattcaaaagtggctttggggg-------aaaaactggcaaagatccaatacatatggggctgttttgtattttaat 40919522  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    || |||  || |||||||| |||| ||||||||||||||  |||||||||||||||||    
T  40919523 tagttatgggaccaaaatcacaacttttgaaaagataggaagccaaaagtacaattaa 40919580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 47096591 - 47096734
Alignment:
Q  55 cacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttag 150  Q
    |||||||| |||||||||||||||| || |||||||||| ||      |||| ||||| | |||||||   | | ||| ||||||| |||||||| ||||    
T  47096591 cacgtcagtgaagactaagtcaaaaatgatcttgggggtcaa------aacttccaaaaatccaatacatagggggctattttgtactttaattagttag 47096684  T
Q  151 agggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
     ||||||||||| |||| ||||||||||||||| ||||||||| |||||||    
T  47096685 ggggccaaaatcgcaacttttgaaaagataggg-gccaaaagtgcaattaa 47096734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 47629439 - 47629375
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    |||||||| |||| ||||||||||| |||  ||||||||||||||| |||||||||||||||||||    
T  47629439 tttaattagttagggggccaaaatcgcaaattttgaaaagataggg-gccaaaagtacaattaagc 47629375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 2016445 - 2016489
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||    
T  2016445 tgggtgccacgtctgcgaagactaagtcaaaagtggccttggggg 2016489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 10726094 - 10726138
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||    
T  10726094 tgggtgccacatcagcaaagactaagtcaaaagtggtcttggggg 10726138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 10939863 - 10939907
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||    
T  10939863 tgggtgccacatcagcaaagactaagtcaaaagtggtcttggggg 10939907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 26858534 - 26858578
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||    
T  26858534 tgggtgccacgtcagcgaagactaagttaaaagtggccttggggg 26858578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 13209583 - 13209541
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggg 90  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  13209583 tgggtgtcatgtcagcgaagactaagtcaaaagtggtcttggg 13209541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 12892890 - 12892825
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    |||||||| ||||  ||| |||||| |||| ||||||||||||||| ||||||||| |||||||||    
T  12892890 tttaattagttagttggcaaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagc 12892825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 13306900 - 13306969
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||| ||||  || ||||||| |||| ||||||||||||||| ||||||||| ||||||| |||||    
T  13306900 tttaattagttaggaggtcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaaacctat 13306969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 29860718 - 29860653
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    |||||||| |||| || | |||||| |||| ||||||||||||||| ||||||||| |||||||||    
T  29860718 tttaattagttaggggactaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagc 29860653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 29860788 - 29860892
Alignment:
Q  101 aaaactgccaaagagccaatac--gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaa 197  Q
    |||||||||||||| |||||||   || ||| |||| || |||||||| |||| ||||||||||| |||| |||| |||||| ||| ||||||||| |||    
T  29860788 aaaactgccaaagatccaatacagaagggctgttttatattttaattagttagggggccaaaatcgcaacttttggaaagatggggggccaaaagtgcaa 29860887  T
Q  198 ttaag 202  Q
    |||||    
T  29860888 ttaag 29860892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 2016676 - 2016744
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    ||||||||  ||||||||||||||| |||| |||| |||||||| | || |||||| ||||||||||||    
T  2016676 tttaattaggtagagggccaaaatcgcaacttttggaaagatagtgggcaaaaagtgcaattaagccta 2016744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 8167977 - 8167941
Alignment:
Q  46 tatgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    ||||||||||||||||||||||||||||| |||||||    
T  8167977 tatgggtgccacgtcagcgaagactaagttaaaagtg 8167941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 9119591 - 9119747
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaat 143  Q
    |||||||||||| |||||||||||||||||||||||  |||       |||| ||||| |||||||| |||||||   | | ||| ||||||| ||||||    
T  9119591 tgggtgccacgttagcgaagactaagtcaaaagtggcattg-------aggccaaaacagccaaagatccaatacatagtgagctgttttgtattttaat 9119683  T
Q  144 tattta--gagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    || |||  | ||||||||||| |||| |||| ||||||| |  ||||||||| |||||||||||    
T  9119684 tagttagggggggccaaaatcacaacttttggaaagataagaggccaaaagtgcaattaagcct 9119747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 45904067 - 45904023
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||| || |||||||||||||||| ||||||||    
T  45904067 tgggtgccacgtcagcaaatactaagtcaaaagtggccttggggg 45904023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 49869666 - 49869734
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||  ||||||||||| |||| ||||||||||||||  | ||||||| ||||||||||||    
T  49869666 tttaattagttaaggggccaaaatcgcaacttttgaaaagataggaggtcaaaagtgcaattaagccta 49869734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 51843538 - 51843602
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    |||||||| |||  |||| ||||||| ||| ||||||||||||||| ||||||||| ||||||||    
T  51843538 tttaattagttatggggctaaaatcttaacttttgaaaagatagggggccaaaagtgcaattaag 51843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 7644531 - 7644448
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattata 213  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||| ||||||    
T  7644531 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctaaattata 7644448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 9695214 - 9695183
Alignment:
Q  52 tgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    ||||||||||||||||||||||||||||||||    
T  9695214 tgccacgtcagcgaagactaagtcaaaagtgg 9695183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 18988253 - 18988174
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatat 209  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||||||    
T  18988253 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctatat 18988174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 19956882 - 19956917
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    |||||||||||||| |||||||||||||||||||||    
T  19956882 tgggtgccacgtcaacgaagactaagtcaaaagtgg 19956917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 214
Target Start/End: Original strand, 39907290 - 39907407
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   ||  ||| |||||||||| ||||| |||| || |||||||   ||| ||| |||||||||||  |||||||| ||    
T  39907290 aaaactgccaaagatccaatacatagaaggctgttttgtattttaattagttaggggaccaaaattgtaacttttaaaaagataggggaccaaaagtgca 39907389  T
Q  197 attaagcctatattataa 214  Q
    ||||||||||| ||||||    
T  39907390 attaagcctattttataa 39907407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 3556161 - 3556227
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||| |||  ||| ||||||| |||| ||||||||||||||| ||||||| | ||||||||||    
T  3556161 tttaattagttaaggggtcaaaatcacaacttttgaaaagatagggggccaaaaatgcaattaagcc 3556227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 191
Target Start/End: Original strand, 7472348 - 7472485
Alignment:
Q  52 tgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatt 147  Q
    ||||||||||||||||||| |||||||||||| |||||      |||| ||||||| |||||| |||||||   | |  || ||||||| |||||||| |    
T  7472348 tgccacgtcagcgaagacttagtcaaaagtggccttgg------aggccaaaactgtcaaagatccaatacataggggactgttttgtattttaattagt 7472441  T
Q  148 tagagggccaaaatctcaacatttgaaaagatagggtgccaaaa 191  Q
    ||| ||| ||||||| |||| |||  |||||||||| |||||||    
T  7472442 tagggggtcaaaatcgcaacttttagaaagatagggggccaaaa 7472485  T

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Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 13019347 - 13019273
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||||||| ||| |||| |||||| || | |||| |||||||||||||||  |||||||| ||||||||||    
T  13019347 ttttgtatttaaattagttagtgggccataaccacaacttttgaaaagataggggtccaaaagtgcaattaagcc 13019273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 17554285 - 17554359
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    |||||||||||| ||| |||| || ||| |||| |||| |||||||||||||||  |||||||| ||||||||||    
T  17554285 ttttgtatttaaattagttaggggtccataatcgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 17554359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 19725710 - 19725653
Alignment:
Q  152 gggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    ||||||||||| || | |||| |||||||||| ||||||||| ||||||||||||||||    
T  19725710 gggccaaaatcgca-cttttggaaagatagggggccaaaagtgcaattaagcctatatt 19725653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 21537116 - 21537194
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctata 208  Q
    |||||||||||| ||| |||| || ||||||   |||| |||||||||||||||  |||||||| ||||||||||||||    
T  21537116 ttttgtatttaaattagttaggggtccaaaagtgcaacttttgaaaagataggggtccaaaagtgcaattaagcctata 21537194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 39332393 - 39332307
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattataaca 216  Q
    |||||||||||| ||| |||| |||||| || | |||| |||||||||||||||  |||||| | |||||||||||| | |||||||    
T  39332393 ttttgtatttaaattagttagggggccataaccgcaacttttgaaaagataggggtccaaaaatgcaattaagcctaaaatataaca 39332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 39907011 - 39906941
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctata 208  Q
    |||||||| |||| || |||||||| |||| ||||||||||| ||  ||||||| | ||||||||||||||    
T  39907011 tttaattagttaggggaccaaaatcacaacttttgaaaagattggaggccaaaaatgcaattaagcctata 39906941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 39136338 - 39136293
Alignment:
Q  164 caacatttgaaaagatagggtgccaaaagtacaattaagcctatat 209  Q
    |||| |||||||||||||||  |||||||| |||||||||||||||    
T  39136338 caacttttgaaaagataggggtccaaaagtgcaattaagcctatat 39136293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 49869568 - 49869617
Alignment:
Q  38 ttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtctt 87  Q
    ||||| ||| |||||||||| ||||||||||| ||||||||| |||||||    
T  49869568 ttaagtgatgtgggtgccacatcagcgaagaccaagtcaaaattggtctt 49869617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 77
Target Start/End: Original strand, 51240173 - 51240202
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaa 77  Q
    ||||||||||||||||||||||||||||||    
T  51240173 tgggtgccacgtcagcgaagactaagtcaa 51240202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 206
Target Start/End: Complemental strand, 55732718 - 55732566
Alignment:
Q  52 tgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatt 147  Q
    |||||| ||||| ||||| ||||||||| ||| ||||||||      | |||||||||||| | |||||||   | | ||| |||||||||| ||||| |    
T  55732718 tgccacatcagcaaagaccaagtcaaaattggccttggggg------ccaaaactgccaaatatccaatacatagggggctgttttgtattttaattagt 55732625  T
Q  148 tagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    ||| || |||||||| |||| |||| ||| |||||| | ||||||| ||||||||||||    
T  55732624 taggggcccaaaatcacaacttttggaaatatagggggtcaaaagttcaattaagccta 55732566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 232930 - 233006
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  232930 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 233006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 2654130 - 2654174
Alignment:
Q  49 gggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    |||||||||||||||| |||| ||||||||| ||| |||||||||    
T  2654130 gggtgccacgtcagcgtagaccaagtcaaaattggccttgggggt 2654174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 4049370 - 4049438
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||  ||||||||||| |||| |||| |||||||| | ||||||||| ||||||| ||||    
T  4049370 tttaattagttatggggccaaaatcgcaacttttggaaagatagagggccaaaagtgcaattaaaccta 4049438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 4902395 - 4902471
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| ||||||||||||    
T  4902395 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 4902471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8167964 - 8168004
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaa 41  Q
    |||||||||||| |||| |||||| ||||||||||||||||    
T  8167964 acgtggcacccataatgatcgacacgtgacacctcacttaa 8168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 10046175 - 10046251
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||  |||||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  10046175 ttttgtatttaaattagttaaggggccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 10046251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 13021218 - 13021294
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| ||||||||||||    
T  13021218 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 13021294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 14578679 - 14578755
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  14578679 ttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtgcaattaagccta 14578755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 20472785 - 20472861
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||| ||||||||||  |||||||||||||||||||||    
T  20472785 ttttgtatttaaattagttaggggtccataaccgcaacttttggaaagataggggtccaaaagtacaattaagccta 20472861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 31250708 - 31250784
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  31250708 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 31250784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 34158712 - 34158788
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| ||||||| ||| || | |||| |||||||||||||||  |||||||| ||||||| ||||    
T  34158712 ttttgtatttaaattagttagaggtccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaaaccta 34158788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 38371345 - 38371269
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  38371345 ttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtgcaattaagccta 38371269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 40489480 - 40489540
Alignment:
Q  131 ttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaa 190  Q
    |||||||||| ||||| |||| |||||||||||  ||| ||||||||||||||| ||||||    
T  40489480 ttttgtattttaattagttagggggccaaaatcagaacttttgaaaagatagggggccaaa 40489540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2010 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold2010
Description:

Target: scaffold2010; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 694 - 492
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||   |||||      |||     
T  694 acgtggcacccacaatggtcgacgcgtggcacctcacttaagggatatgagtgccacgtcagggaagactaagtcaaaagtgacattggg------ggcc 601  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| | |||||   | | ||| ||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||| | ||||||| ||    
T  600 aaaactgccaaagatctaatacatagggggctgttttgtattttaattatttagggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgca 501  T
Q  197 attaagcct 205  Q
    |||||||||    
T  500 attaagcct 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 53764775 - 53764574
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||      |||     
T  53764775 acgtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagtgaagactaagtcaaaagtggccttggg------ggcc 53764682  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| | |||||   | | ||| ||||||| |||||||| |||| |||| |||||| |||| |||| |||||||||| ||||||||| ||    
T  53764681 aaaactgccaaagatctaatacatagggggctgttttgtattttaattagttag-gggctaaaatcgcaacttttggaaagatagggggccaaaagtgca 53764583  T
Q  197 attaagcct 205  Q
    |||||||||    
T  53764582 attaagcct 53764574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 53568495 - 53568292
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||| |||||||||||| |||| ||| |||||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||      |||     
T  53568495 acgtggtacccacaatggtggacacgtggcaccttgcttaagggatatgggtgccacgtcagcgaagactaaatcaaaagtggccttggg------ggcc 53568402  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacattt-gaaaagatagggtgccaaaagtac 195  Q
    |||||||||||||| |||||||   | |  || ||||||| |||||||| |||||||||||||||| |||| |||  ||||||||||  ||||||||| |    
T  53568401 aaaactgccaaagatccaatacataggggactgttttgtattttaattagttagagggccaaaatcgcaacttttaaaaaagataggaggccaaaagtgc 53568302  T
Q  196 aattaagcct 205  Q
    ||||||||||    
T  53568301 aattaagcct 53568292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 206
Target Start/End: Original strand, 50724889 - 50725062
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaat--acgagtg 127  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||       || |||||||||||||| |||||  |   | |    
T  50724889 cacctcacttaagagatatgggtgccacgtcagcgaagactaagtcaaaagtggtattggg------agccaaaactgccaaagatccaatgcatagggg 50724982  T
Q  128 cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    || ||||||| |||||||| |||||||| ||||||| |||  ||||||||||||||| ||||||||| ||||||||||||    
T  50724983 ctgttttgtattttaattaattagagggtcaaaatcgcaagttttgaaaagatagggggccaaaagtgcaattaagccta 50725062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 206
Target Start/End: Complemental strand, 50787961 - 50787788
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaat--acgagtg 127  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||       || |||||||||||||| |||||  |   | |    
T  50787961 cacctcacttaagagatatgggtgccacgtcagcgaagactaagtcaaaagtggtattggg------agccaaaactgccaaagatccaatgcatagggg 50787868  T
Q  128 cttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    || ||||||| |||||||| |||||||| ||||||| |||  ||||||||||||||| ||||||||| ||||||||||||    
T  50787867 ctgttttgtattttaattaattagagggtcaaaatcgcaagttttgaaaagatagggggccaaaagtgcaattaagccta 50787788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 51187868 - 51187777
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||||||  |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  51187868 acgtggcattcacaatggtcgacacgtgacacctcatttaagggatatgggtgtcacgtcagcgaagactaagtcaaaagtggccttggggg 51187777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 54716619 - 54716821
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||| ||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||||||| |||||||||||||||  ||||||      |||     
T  54716619 acgtggtacccacaatggtcgacacgtagcacctcacttaagggatgtgggtgccacgtcagcgaatactaagtcaaaagtgaccttggg------ggcc 54716712  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    ||||||| |||||| |||||||   ||| | | ||||||| |||||||| |||| || |||||||| |||| ||| ||||||||||   |||||||| ||    
T  54716713 aaaactgtcaaagatccaatacatagagggttgttttgtattttaattagttaggggaccaaaatcgcaacttttaaaaagataggtgaccaaaagtgca 54716812  T
Q  197 attaagcct 205  Q
    |||||||||    
T  54716813 attaagcct 54716821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 204
Target Start/End: Complemental strand, 45125289 - 45125095
Alignment:
Q  7 cacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaact 106  Q
    ||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||      ||| ||||||    
T  45125289 cacccacaatggtcgtcacgtggcacctcacttaagggatgtgggtgccacgtcagcgaaaactaaatcaaaagtggtcttggg------ggccaaaact 45125196  T
Q  107 gccaaagagccaatac--gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagc 203  Q
    ||||| || | |||||    | | | ||||||| |||||||| |||| ||||||||||| |||| ||||||||||||| | || |||||| |||||||||    
T  45125195 gccaatgatctaatacatatgggttgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagagggctaaaagtgcaattaagc 45125096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43001795 - 43001713
Alignment:
Q  1 acgtggcacc-cacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtg 82  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43001795 acgtggcacctcacaatggtcgacacgtggcacctcacttaagggatatgggtgtcacgtcagcgaagactaagtcaaaagtg 43001713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 51494716 - 51494516
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    |||||||| |||||||||||||||  || ||||||||||||||||| |||||||||||||||||||  ||||||||||||||  ||||||      ||||    
T  51494716 acgtggcatccacaatggtcgacacatggcacctcacttaagggatgtgggtgccacgtcagcgaatgctaagtcaaaagtgaacttggg------ggct 51494623  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | | | ||||||| |||||||| | || || |||||||| |||| |||||||||||| || |  |||||||||    
T  51494622 aaaactgccaaagatccaatacgtagggggttgttttgtattttaattaatcaggggaccaaaatcacaacttttgaaaagataagg-gttaaaagtaca 51494524  T
Q  197 attaagcc 204  Q
    ||||||||    
T  51494523 attaagcc 51494516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 7569299 - 7569363
Alignment:
Q  26 gtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggg 90  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7569299 gtgacatctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttggg 7569363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 42996601 - 42996529
Alignment:
Q  11 cacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtgg 83  Q
    |||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42996601 cacaatggtcaacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtgg 42996529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 9169171 - 9168971
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggct 100  Q
    ||||| |||||  ||| |||||||  || ||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| |||||||||           
T  9169171 acgtgacacccttaatagtcgacacatggcacctcacttaagggatgtggttgccacgtcagtgaagactaagtcaaaagtggccttgggggt------c 9169078  T
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
     ||||||||||||| |||||||   | | | | ||||||| |||||||| |||| |||  |||||| |||| ||||||||||| | | ||||||||| ||    
T  9169077 caaactgccaaagatccaatacatagggggttgttttgtattttaattagttagggggttaaaatcgcaacttttgaaaagattgagggccaaaagtgca 9168978  T
Q  197 attaagc 203  Q
    |||||||    
T  9168977 attaagc 9168971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 206
Target Start/End: Complemental strand, 54716630 - 54716474
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aat 143  Q
    ||||| ||||||||| |||||||||||||||||||| |||||| |      | |||||| ||||||| |||||||   | | ||| |||||||||| |||    
T  54716630 tgggtaccacgtcagtgaagactaagtcaaaagtggccttgggag------ccaaaactaccaaagatccaatacatagggggctgttttgtattttaat 54716537  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    || |||| ||| ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||    
T  54716536 tagttagggggtcaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaagccta 54716474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 205
Target Start/End: Complemental strand, 7569283 - 7569130
Alignment:
Q  49 gggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aatt 144  Q
    |||| |||||| ||||||||||||||||||||||||||||||||      | |||| ||||||||| |||||||   | | | | |||||||||| ||||    
T  7569283 gggtcccacgttagcgaagactaagtcaaaagtggtcttggggg------ccaaaaatgccaaagatccaatacatagggggttgttttgtattttaatt 7569190  T
Q  145 atttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    | |||| ||||||||||| |||| ||||||||||||||  ||||||||| |||||||||||    
T  7569189 agttag-gggccaaaatcgcaacttttgaaaagataggacgccaaaagtgcaattaagcct 7569130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14003952 - 14004037
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggg 91  Q
    |||||||||||||||||||||||| ||| |||||     ||||||| |||||||||| |||| ||||||||| ||||||||||||||||||    
T  14003952 acgtggcacccacaatggtcgacacgtggcacct-----aagggatgtgggtgccacatcagagaagactaactcaaaagtggtcttgggg 14004037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 205
Target Start/End: Original strand, 43001786 - 43001939
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatacga---gtgcttttttgtattt-aatta 145  Q
    ||||||||||||||||||||||||||||||||||  |||||||      | |||||||||||||| ||||||      | ||| |||||||||| |||||    
T  43001786 ggtgccacgtcagcgaagactaagtcaaaagtggcattggggg------ccaaaactgccaaagatccaatatataatgggctgttttgtattttaatta 43001879  T
Q  146 tttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
     |||| ||||||||||| |||  ||| ||||||||||| ||||||||| |||||||||||    
T  43001880 gttagggggccaaaatcgcaatttttaaaaagatagggggccaaaagtgcaattaagcct 43001939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 14770559 - 14770728
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagt 126  Q
    ||||||||||||| ||| |||||| ||||||||||||||| ||||||||| || |||||      | ||| ||||| |||||||| |||||||   | |     
T  14770559 cacctcacttaagtgatgtgggtggcacgtcagcgaagaccaagtcaaaattgatcttg------agggccaaaacggccaaagatccaatacatagggg 14770652  T
Q  127 gcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaa 201  Q
    ||| ||||||| |||||||| |||| ||||||| ||| |||| |||| |||||||| | ||||||||| |||||||    
T  14770653 gctgttttgtattttaattagttagggggccaagatcgcaacttttggaaagatagagggccaaaagtgcaattaa 14770728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 14003963 - 14003918
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  14003963 tgggtgccacgttagcgaagactaagtcaaaagtggtcttgggggt 14003918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 46934105 - 46934036
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||| |||| |||| |||||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  46934105 tttaattagttagggggctaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctat 46934036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 5049516 - 5049354
Alignment:
Q  49 gggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aatt 144  Q
    ||||||| |||||||||||||||||||||||||||  |||||||      | ||||||| |||||| |||||||   | | ||| |||| ||||| ||||    
T  5049516 gggtgccgcgtcagcgaagactaagtcaaaagtggctttggggg------ccaaaactgtcaaagatccaatacatagggggctgttttatattttaatt 5049423  T
Q  145 atttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattataa 214  Q
    | ||||  |||||||||| |||| |||||||||||| || ||||||||| |||||||| || ||||||||    
T  5049422 aattaggaggccaaaatcgcaacttttgaaaagataagg-gccaaaagtgcaattaagtctttattataa 5049354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 5049520 - 5049665
Alignment:
Q  61 agcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatacga--gtgcttttttgtattt-aattatttagagggcca 157  Q
    |||||||||| |||||||||||| ||||||||      | |||||||||||||| |||||||    | ||| |||||||||| ||||| ||||  |||||    
T  5049520 agcgaagacttagtcaaaagtggccttggggg------ccaaaactgccaaagatccaatacataggggctgttttgtattttaattagttaggaggcca 5049613  T
Q  158 aaatctcaacatttgaaaagat-agggtgccaaaagtacaattaagcctata 208  Q
    ||||| |||| ||||||||||| |||| ||||||||| ||||||| ||||||    
T  5049614 aaatcgcaacttttgaaaagataagggggccaaaagtgcaattaaacctata 5049665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 201
Target Start/End: Original strand, 47284401 - 47284602
Alignment:
Q  6 gcacccacaatggtcgacatgtgacacctcacttaaggga--------tatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaag 97  Q
    |||||| |||||||||||| ||| ||||||||||||||||        || | ||| |||||||||||||| ||||||||||| || ||||||      |    
T  47284401 gcacccccaatggtcgacacgtggcacctcacttaagggatgttaccctacgtgtgtcacgtcagcgaagattaagtcaaaagcggccttggg------g 47284494  T
Q  98 gctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagt 193  Q
    || |||| ||||||||| |||||||   | | ||| ||||||| |||||||| |||| || |||||||| |||| ||| ||||||||||| | |||||||    
T  47284495 gccaaaattgccaaagatccaatacatagggggctgttttgtattttaattagttaggggaccaaaatcgcaacttttaaaaagatagggggtcaaaagt 47284594  T
Q  194 acaattaa 201  Q
     |||||||    
T  47284595 gcaattaa 47284602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 44702073 - 44702179
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| |||||||||| ||||| |||| ||||||||||| |||| ||||||||||||||| || ||||||  |    
T  44702073 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagggggccaaaatcacaacttttgaaaagatagggggcaaaaagtgta 44702172  T
Q  197 attaagc 203  Q
    |||||||    
T  44702173 attaagc 44702179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 46934235 - 46934303
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||| |||| |||||| |||| |||| |||| |||||||||| ||||||||| ||||||||||||    
T  46934235 tttaattagttagggggccataatcgcaacttttggaaagatagggggccaaaagtgcaattaagccta 46934303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 51187861 - 51187901
Alignment:
Q  52 tgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  51187861 tgccacgtcagcgaagactaagtcaaaagtggtcgtggggg 51187901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 205
Target Start/End: Original strand, 9169161 - 9169315
Alignment:
Q  49 gggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaatt 144  Q
    ||||| |||||| |||||||||||||||||||||| ||||||      ||| |||||||||||||| |||||||   | | ||| ||||||| |||||||    
T  9169161 gggtgtcacgtcggcgaagactaagtcaaaagtggccttggg------ggccaaaactgccaaagatccaatacatagggggctgttttgtattttaatt 9169254  T
Q  145 atttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    | |||| | ||||||||  |||| |||| |||||| | | || |||||| |||||||||||    
T  9169255 agttagggagccaaaattgcaacttttggaaagattgagggcaaaaagtgcaattaagcct 9169315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 53764764 - 53764805
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgg 89  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  53764764 tgggtgccacgtcagcaaagactaagtcaaaagtggccttgg 53764805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 50380221 - 50380149
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatatt 210  Q
    |||||||| |||| ||||||||||| |||| | | |||| |||| | ||||||||| ||||||||||||||||    
T  50380221 tttaattaattagggggccaaaatcgcaacttcttaaaacatagagggccaaaagtgcaattaagcctatatt 50380149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 50724892 - 50724777
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaatta 145  Q
    ||||||||||||| ||||||||||||||||||||  |||||      ||| |||||||||||||| |||||||   | |  || ||||||| ||||||||    
T  50724892 ggtgccacgtcagtgaagactaagtcaaaagtggcattggg------ggccaaaactgccaaagatccaatacatagggaactgttttgtattttaatta 50724799  T
Q  146 tttagagggccaaaatctcaac 167  Q
     |||||||||||||||| ||||    
T  50724798 gttagagggccaaaatcgcaac 50724777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 50787958 - 50788073
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaatta 145  Q
    ||||||||||||| ||||||||||||||||||||  |||||      ||| |||||||||||||| |||||||   | |  || ||||||| ||||||||    
T  50787958 ggtgccacgtcagtgaagactaagtcaaaagtggcattggg------ggccaaaactgccaaagatccaatacatagggaactgttttgtattttaatta 50788051  T
Q  146 tttagagggccaaaatctcaac 167  Q
     |||||||||||||||| ||||    
T  50788052 gttagagggccaaaatcgcaac 50788073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 51187768 - 51187716
Alignment:
Q  154 gccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||||| |||||||||||| |  ||||||||| ||||||||||||    
T  51187768 gccaaaatctcaacttttgaaaagataagaggccaaaagtgcaattaagccta 51187716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 7858021 - 7857978
Alignment:
Q  164 caacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||| |||||||||||||||  ||||||||||||||||||||||    
T  7858021 caacttttgaaaagataggggtccaaaagtacaattaagcctat 7857978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 47943699 - 47943782
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattata 213  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| |||||||||||| ||||||    
T  47943699 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctacattata 47943782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 54476150 - 54476041
Alignment:
Q  101 aaaactgccaaagagccaatac---gagtgcttttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtaca 196  Q
    |||||||||||||| |||||||   | | ||| |||||||||| ||||| |||| ||| ||||||| |||| | | |||| |||||| ||||||||| ||    
T  54476150 aaaactgccaaagatccaatacatagggggctgttttgtattttaattagttagggggtcaaaatcgcaacttcttaaaatatagggggccaaaagtgca 54476051  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  54476050 attaagccta 54476041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 55228009 - 55228122
Alignment:
Q  97 ggctaaaactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaag 192  Q
    |||||||||||||||||| |||||||   | | ||| ||||||| |||||||| |||| || |||||||| |||| | | |||| |||||| ||||||||    
T  55228009 ggctaaaactgccaaagatccaatacatagggggctgttttgtattttaattagttaggggtccaaaatcgcaacttcttaaaatatagggggccaaaag 55228108  T
Q  193 tacaattaagccta 206  Q
    || |||||| ||||    
T  55228109 tataattaaaccta 55228122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 24636390 - 24636348
Alignment:
Q  164 caacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||| |||||||||||||||  |||||||||||||||||||||    
T  24636390 caacttttgaaaagataggggtccaaaagtacaattaagccta 24636348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 32205087 - 32205161
Alignment:
Q  132 tttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||||||||||| ||| ||||||| ||| || | |||| |||||||||||||||  |||||||| |||||||||||    
T  32205087 tttgtatttaaattagttagaggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcct 32205161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 14004073 - 14004150
Alignment:
Q  131 ttttgtattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctat 207  Q
    |||||||||| ||||| |||| ||| | |||||  ||| |||||||||||||||  |||||||| |||||||||||||    
T  14004073 ttttgtattttaattagttagggggtccaaatcgaaacttttgaaaagatagggatccaaaagtgcaattaagcctat 14004150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 40410125 - 40410190
Alignment:
Q  142 attatttagagggccaaaatctcaacatttgaa-aagatagggtgccaaaagtacaattaagccta 206  Q
    |||| |||| ||||||||||| |||| |||| | ||||||||| ||||||||| ||||||||||||    
T  40410125 attagttagggggccaaaatcgcaacttttggacaagatagggggccaaaagtgcaattaagccta 40410190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 12881309 - 12881233
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| ||||||||||||    
T  12881309 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 12881233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 12881454 - 12881530
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| ||||||||||||    
T  12881454 ttttgtatttaaattagttagggggccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 12881530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 19914550 - 19914474
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  19914550 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 19914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 21841801 - 21841725
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| |||||| || | |||| |||| ||||||||||  |||||||| ||||||||||||    
T  21841801 ttttgtatttaaattagttagggggccataaccacaacttttggaaagataggggtccaaaagtgcaattaagccta 21841725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 25126237 - 25126313
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  25126237 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 25126313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 31117694 - 31117618
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  31117694 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 31117618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 32594008 - 32594084
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| |||||| || | |||| ||||||||||||| |  |||||||||||||||| ||||    
T  32594008 ttttgtatttaaattagttagggggccataaccacaacttttgaaaagatagaggtccaaaagtacaattaaaccta 32594084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 33252558 - 33252482
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| |||| |||| |||  ||||||||||  |||||||||||||||||||||    
T  33252558 ttttgtatttaaattagttaggggtccataatcgcaacttttagaaagataggggtccaaaagtacaattaagccta 33252482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 157472 - 157270
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||      ||| ||    
T  157472 gtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggcattggg------ggccaa 157379  T
Q  103 aactgccaaagagcca----atacgagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagataggg-tgccaaaagtaca 196  Q
    |||||||||||| |||    |||||| |||| ||||||| |||||||| ||||| | |||||||| |||| |||||||||||||||  ||||||| | ||    
T  157378 aactgccaaagatccaatacatacga-tgctgttttgtattttaattagttagaagaccaaaatcgcaacctttgaaaagatagggaggccaaaattgca 157280  T
Q  197 attaagccta 206  Q
    ||||||||||    
T  157279 attaagccta 157270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 207
Target Start/End: Original strand, 55268 - 55469
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||      |||| ||    
T  55268 gtggcacccacaatggtcgacacgtggcacctcacttaagggatgtgggtgccacgtcagcgaagactaactcaaaagtggccttgg------aggccaa 55361  T
Q  103 aactgccaaagagcca---atacgagtgcttttttgtatt-taattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaat 198  Q
    |||| ||||||| |||   ||| | | ||| ||||||||| |||||| |||| ||||||||||| |||| |||||||||||||||  |||||||| ||||    
T  55362 aactaccaaagatccaaacata-gggggctgttttgtattctaattagttagggggccaaaatcgcaacttttgaaaagatagggaaccaaaagtgcaat 55460  T
Q  199 taagcctat 207  Q
    ||| |||||    
T  55461 taaacctat 55469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 55277 - 55233
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||| ||||| |||||||||||||||||||| |||||||    
T  55277 tgggtgccacatcagcaaagactaagtcaaaagtggtattggggg 55233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 23016 - 22815
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    |||||| ||| |||||| |||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||      ||| ||    
T  23016 gtggcatccataatggttgacatgtggcacctcactaaagggatgtgggtgccacgtcagcgaagactaagtcaaaagtggccttggg------ggccaa 22923  T
Q  103 aactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaat 198  Q
    ||||| |||||| |||||||   | | | | ||||||| |||||||| || | ||||||||||| |||| |||| ||||||| || ||||||||| ||||    
T  22922 aactggcaaagatccaatacatagggggttgttttgtattttaattagttggggggccaaaatcgcaacttttggaaagataaggggccaaaagtgcaat 22823  T
Q  199 taagccta 206  Q
    ||||||||    
T  22822 taagccta 22815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 23005 - 23052
Alignment:
Q  46 tatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggt 93  Q
    ||||| |||||| ||||||||||||||||||||||||  |||||||||    
T  23005 tatggatgccacatcagcgaagactaagtcaaaagtgaccttgggggt 23052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 23109 - 23161
Alignment:
Q  152 gggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcc 204  Q
    ||||||||||| |||| ||||||||||||| |  |||||||| ||||||||||    
T  23109 gggccaaaatcgcaacttttgaaaagatagaggaccaaaagtgcaattaagcc 23161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 204
Target Start/End: Complemental strand, 32178 - 31979
Alignment:
Q  3 gtggcacccacaatggtcgacatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaa 102  Q
    |||||||||||||||||||| | ||| ||||||||||||||||| |||||| ||||||| ||||||| |||||||||||||  |||||      ||| ||    
T  32178 gtggcacccacaatggtcgatacgtggcacctcacttaagggatgtgggtgtcacgtcaacgaagaccaagtcaaaagtggcattggg------ggccaa 32085  T
Q  103 aactgccaaagagccaatac---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaat 198  Q
    |||||| ||||| |||||||   | | ||| ||||||| |||||||| |||| ||||||||||  |||| |||| |||||||||| ||||||||| ||||    
T  32084 aactgctaaagatccaatacatagggggctgttttgtattttaattagttagggggccaaaattgcaacttttggaaagatagggggccaaaagtgcaat 31985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 32169 - 32324
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aat 143  Q
    |||||||||| ||| |||||||||||||||||||| |||| ||||      | |||| ||||||| | |||| ||   | | ||| |||||||||| |||    
T  32169 tgggtgccacttcaacgaagactaagtcaaaagtgctcttagggg------ccaaaattgccaaaaatccaaaacatagggggctgttttgtattttaat 32262  T
Q  144 tatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    || |||| ||||||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  32263 tagttagggggccaaaatcgcaacttttggaaagatagggggccaaaagtacaattaagcct 32324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 205
Target Start/End: Original strand, 63198 - 63377
Alignment:
Q  22 acatgtgacacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaata 121  Q
    ||||||| |||||||||||| | || |||||||||||||| ||||||| ||||||||| ||||||| |||||       |||||||||||||| ||||||    
T  63198 acatgtggcacctcacttaatg-atgtgggtgccacgtcaacgaagaccaagtcaaaattggtcttcggggt------caaaactgccaaagatccaata 63290  T
Q  122 c---gagtgcttttttgta-tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |   | | ||| ||||||| |||||||| |||| || |||||||| |||| |||||||| |||||| | ||||||| |||||||||||    
T  63291 catagggggctgttttgtattttaattagttaggggaccaaaatcgcaacttttgaaaaaataggg-gtcaaaagtgcaattaagcct 63377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 63189 - 63145
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    |||||||||||||||||||||| ||||||||| || |||||||||    
T  63189 tgggtgccacgtcagcgaagaccaagtcaaaattgatcttggggg 63145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 205
Target Start/End: Original strand, 122491 - 122644
Alignment:
Q  50 ggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatac---gagtgcttttttgtattt-aatta 145  Q
    ||||||| ||||||||||| ||||| |||||||| |||||| |      | |||||||||||||| |||||||   | | ||| |||||||||| |||||    
T  122491 ggtgccatgtcagcgaagattaagttaaaagtggccttgggag------ccaaaactgccaaagatccaatacatagggggctgttttgtattttaatta 122584  T
Q  146 tttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
     ||||  |||||||||| |||| |||| |||||||||| ||||||||| |||||||||||    
T  122585 gttaggaggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 122644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 205
Target Start/End: Original strand, 7065 - 7229
Alignment:
Q  38 ttaagggatatgggtgccacgtcagcgaagactaagtcaaaagtggtcttgggggttaaggctaaaactgccaaagagccaatacga--gtgcttttttg 135  Q
    ||||||||| |||||||||||||| |||| |||| |||||||||||  ||  |||      | |||||||||||||| |||||||    | ||| |||||    
T  7065 ttaagggatgtgggtgccacgtcaacgaatactaggtcaaaagtggcattaaggg------ccaaaactgccaaagatccaatacataggggctgttttg 7158  T
Q  136 tattt-aattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    ||||| ||||| |||  ||||||||||| |||| |||||||||||| || ||||||||| |||||||||||    
T  7159 tatttcaattagttacggggccaaaatcgcaacttttgaaaagatatggggccaaaagtgcaattaagcct 7229  T

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Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 47767 - 47723
Alignment:
Q  48 tgggtgccacgtcagcgaagactaagtcaaaagtggtcttggggg 92  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||    
T  47767 tgggtaccacgtcagcgaagactaagtcaaaagtggtattggggg 47723  T

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Target: scaffold0032; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47756 - 47799
Alignment:
Q  1 acgtggcacccacaatggtcgacatgtgacacctcacttaaggg 44  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||    
T  47756 acgtggtacccacaatggtcgacacgtggcacctcacttaaggg 47799  T

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Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 47799 - 47863
Alignment:
Q  152 gggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcctatattataaca 216  Q
    ||||||||||| |||| |||||||||||| || | ||||||| ||| ||| ||||||| ||||||    
T  47799 gggccaaaatcgcaacttttgaaaagataaggggtcaaaagtgcaaataaacctatataataaca 47863  T

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Target: scaffold1301 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 1295 - 1362
Alignment:
Q  138 tttaattatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagcct 205  Q
    |||||||| |||| ||||||||||| |||| |||| ||||||| || ||||||||| |||||||||||    
T  1295 tttaattagttagggggccaaaatcgcaacttttggaaagataaggggccaaaagtgcaattaagcct 1362  T

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Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 32694 - 32645
Alignment:
Q  30 cacctcacttaagggatatgggtgccacgtcagcgaagactaagtcaaaa 79  Q
    ||||||||||||| ||| |||||| ||||||||||||||| |||||||||    
T  32694 cacctcacttaagtgatgtgggtgtcacgtcagcgaagaccaagtcaaaa 32645  T

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Target: scaffold0693 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 4615 - 4543
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaag 202  Q
    |||||||||||| ||| ||||||||||| || | |||| |||||||||||| ||  |||||||| ||||||||    
T  4615 ttttgtatttaaattagttagagggccataaacgcaacttttgaaaagataagggtccaaaagtgcaattaag 4543  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 79226 - 79302
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  79226 ttttgtatttaaattagttaggggtccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 79302  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 238696 - 238620
Alignment:
Q  131 ttttgtatttaa-ttatttagagggccaaaatctcaacatttgaaaagatagggtgccaaaagtacaattaagccta 206  Q
    |||||||||||| ||| |||| || ||| || | |||| |||||||||||||||  |||||||| ||||||||||||    
T  238696 ttttgtatttaaattagttaggggtccataaccacaacttttgaaaagataggggtccaaaagtgcaattaagccta 238620  T

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