View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18588_low_5 (Length: 499)

Name: NF18588_low_5
Description: NF18588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18588_low_5
NF18588_low_5
[»] chr4 (65 HSPs)
chr4 (9-483)||(40964908-40965382)
chr4 (174-296)||(35788663-35788789)
chr4 (144-296)||(52559541-52559698)
chr4 (142-249)||(6218411-6218522)
chr4 (142-212)||(28245568-28245638)
chr4 (161-296)||(30565988-30566127)
chr4 (142-212)||(44118901-44118971)
chr4 (144-212)||(21750084-21750152)
chr4 (142-259)||(50543558-50543679)
chr4 (178-259)||(53814920-53815005)
chr4 (142-213)||(39902604-39902675)
chr4 (142-212)||(22827510-22827580)
chr4 (161-296)||(35796932-35797070)
chr4 (142-296)||(6218176-6218333)
chr4 (150-296)||(22231263-22231412)
chr4 (143-208)||(32333956-32334021)
chr4 (142-259)||(400556-400677)
chr4 (178-259)||(5846154-5846239)
chr4 (178-259)||(21498362-21498447)
chr4 (142-210)||(27634125-27634193)
chr4 (168-212)||(35796784-35796828)
chr4 (142-213)||(980091-980162)
chr4 (182-296)||(24513314-24513431)
chr4 (149-212)||(52559783-52559846)
chr4 (144-251)||(2261752-2261863)
chr4 (142-212)||(5846351-5846421)
chr4 (174-212)||(11036788-11036826)
chr4 (142-212)||(21684970-21685040)
chr4 (142-212)||(22863446-22863516)
chr4 (142-212)||(27464290-27464360)
chr4 (142-212)||(27634558-27634628)
chr4 (174-212)||(28246127-28246165)
chr4 (174-212)||(35645807-35645845)
chr4 (163-212)||(11036553-11036602)
chr4 (178-252)||(20821981-20822059)
chr4 (142-210)||(18528261-18528329)
chr4 (162-206)||(20726872-20726916)
chr4 (178-251)||(21498803-21498880)
chr4 (142-210)||(31254451-31254519)
chr4 (170-259)||(40717432-40717525)
chr4 (143-259)||(1518137-1518257)
chr4 (177-212)||(50859015-50859050)
chr4 (99-137)||(847946-847984)
chr4 (108-138)||(7214547-7214577)
chr4 (142-208)||(9279199-9279265)
chr4 (178-212)||(9685640-9685674)
chr4 (108-138)||(21658839-21658869)
chr4 (174-212)||(22231115-22231153)
chr4 (174-212)||(22845489-22845527)
chr4 (177-211)||(35609533-35609567)
chr4 (174-212)||(35788898-35788936)
chr4 (175-212)||(2221010-2221047)
chr4 (157-210)||(13637376-13637429)
chr4 (179-212)||(17222694-17222727)
chr4 (108-137)||(36635328-36635357)
chr4 (157-210)||(53699014-53699067)
chr4 (108-136)||(1074802-1074830)
chr4 (178-259)||(14783178-14783263)
chr4 (178-210)||(16066073-16066105)
chr4 (142-210)||(20095264-20095332)
chr4 (178-259)||(25052860-25052945)
chr4 (174-259)||(50543321-50543410)
chr4 (393-421)||(52559626-52559654)
chr4 (178-251)||(53814673-53814750)
chr4 (178-259)||(53828514-53828599)
[»] chr3 (49 HSPs)
chr3 (142-296)||(16239563-16239721)
chr3 (142-296)||(31317201-31317361)
chr3 (142-210)||(41915143-41915211)
chr3 (144-296)||(12930082-12930238)
chr3 (142-259)||(11589757-11589878)
chr3 (174-266)||(16926933-16927029)
chr3 (176-295)||(39620099-39620221)
chr3 (142-211)||(30179751-30179820)
chr3 (170-259)||(9272961-9273054)
chr3 (175-296)||(13574875-13575000)
chr3 (177-296)||(4155331-4155453)
chr3 (178-296)||(20327804-20327925)
chr3 (174-296)||(54567896-54568021)
chr3 (178-259)||(1723067-1723152)
chr3 (142-259)||(35038419-35038540)
chr3 (142-189)||(29575955-29576002)
chr3 (149-212)||(45138844-45138907)
chr3 (178-212)||(8018976-8019010)
chr3 (170-212)||(30138064-30138106)
chr3 (170-212)||(30147615-30147657)
chr3 (142-212)||(35038236-35038306)
chr3 (174-212)||(39269335-39269373)
chr3 (142-249)||(39620298-39620409)
chr3 (142-212)||(50083123-50083193)
chr3 (174-212)||(54368520-54368558)
chr3 (142-211)||(2123779-2123848)
chr3 (175-212)||(2806328-2806365)
chr3 (156-212)||(45139013-45139069)
chr3 (161-212)||(472102-472153)
chr3 (149-241)||(20303073-20303169)
chr3 (149-212)||(20327656-20327719)
chr3 (175-210)||(50930707-50930742)
chr3 (142-212)||(22729072-22729142)
chr3 (178-212)||(23691234-23691268)
chr3 (178-212)||(23691466-23691500)
chr3 (178-212)||(23708034-23708068)
chr3 (178-212)||(23708266-23708300)
chr3 (178-212)||(23726490-23726524)
chr3 (178-212)||(23726722-23726756)
chr3 (178-212)||(23744946-23744980)
chr3 (178-212)||(23745178-23745212)
chr3 (178-212)||(24063471-24063505)
chr3 (178-212)||(24063703-24063737)
chr3 (150-212)||(31317446-31317508)
chr3 (149-210)||(1800194-1800255)
chr3 (108-137)||(24633770-24633799)
chr3 (142-191)||(28480514-28480563)
chr3 (142-191)||(28509697-28509746)
chr3 (149-210)||(49629585-49629645)
[»] chr5 (55 HSPs)
chr5 (174-296)||(41666947-41667073)
chr5 (144-212)||(6413468-6413536)
chr5 (164-296)||(24531593-24531728)
chr5 (142-212)||(7369696-7369766)
chr5 (142-212)||(15438849-15438919)
chr5 (174-296)||(15480326-15480451)
chr5 (142-210)||(6637809-6637877)
chr5 (178-259)||(8098326-8098410)
chr5 (156-212)||(17352477-17352533)
chr5 (138-213)||(16707066-16707141)
chr5 (174-294)||(24528544-24528667)
chr5 (142-213)||(30770306-30770377)
chr5 (143-210)||(35167439-35167506)
chr5 (142-259)||(6919420-6919539)
chr5 (142-212)||(9368802-9368872)
chr5 (170-257)||(42295579-42295670)
chr5 (142-268)||(1564549-1564679)
chr5 (142-212)||(95308-95378)
chr5 (150-212)||(9368575-9368637)
chr5 (178-257)||(21209914-21209997)
chr5 (142-212)||(24346543-24346613)
chr5 (174-212)||(41666799-41666837)
chr5 (175-212)||(60092-60129)
chr5 (174-248)||(24647700-24647778)
chr5 (142-252)||(27132991-27133105)
chr5 (170-211)||(36040519-36040560)
chr5 (157-205)||(6919243-6919291)
chr5 (142-210)||(33337282-33337350)
chr5 (164-211)||(3859351-3859398)
chr5 (174-295)||(6637606-6637731)
chr5 (149-212)||(18333507-18333570)
chr5 (99-138)||(35017032-35017071)
chr5 (233-296)||(35167584-35167647)
chr5 (174-213)||(37782091-37782130)
chr5 (174-212)||(2061980-2062018)
chr5 (164-210)||(11896729-11896775)
chr5 (174-208)||(17150279-17150313)
chr5 (142-212)||(17352710-17352780)
chr5 (174-249)||(19705907-19705986)
chr5 (174-212)||(21306891-21306929)
chr5 (174-212)||(21314729-21314767)
chr5 (142-212)||(24269913-24269982)
chr5 (175-212)||(170593-170630)
chr5 (161-259)||(2986003-2986105)
chr5 (142-259)||(8081104-8081226)
chr5 (180-258)||(13296683-13296764)
chr5 (142-207)||(30770096-30770161)
chr5 (142-210)||(2985272-2985340)
chr5 (142-210)||(11895960-11896027)
chr5 (174-249)||(16293355-16293432)
chr5 (175-207)||(17899507-17899539)
chr5 (156-212)||(28510077-28510133)
chr5 (180-253)||(29909718-29909795)
chr5 (144-212)||(30758341-30758409)
chr5 (155-211)||(38731881-38731937)
[»] chr2 (48 HSPs)
chr2 (142-278)||(38629813-38629953)
chr2 (142-249)||(14927074-14927185)
chr2 (142-211)||(37812541-37812610)
chr2 (142-294)||(2029741-2029896)
chr2 (142-204)||(32356358-32356420)
chr2 (142-212)||(37840309-37840379)
chr2 (174-296)||(5711629-5711755)
chr2 (162-210)||(3738925-3738973)
chr2 (178-259)||(28407784-28407869)
chr2 (142-259)||(40379435-40379556)
chr2 (142-212)||(17719372-17719442)
chr2 (142-207)||(11099650-11099715)
chr2 (178-259)||(2324248-2324333)
chr2 (142-210)||(33606098-33606166)
chr2 (142-209)||(4662203-4662270)
chr2 (142-205)||(8227321-8227384)
chr2 (142-266)||(17854913-17855041)
chr2 (142-212)||(2029976-2030046)
chr2 (174-212)||(16419506-16419544)
chr2 (174-212)||(17525380-17525418)
chr2 (142-249)||(25082538-25082649)
chr2 (142-212)||(35418456-35418526)
chr2 (142-212)||(36351968-36352038)
chr2 (142-212)||(40149045-40149115)
chr2 (142-212)||(40379251-40379321)
chr2 (142-211)||(94063-94132)
chr2 (174-296)||(14466365-14466490)
chr2 (175-249)||(19570975-19571053)
chr2 (142-211)||(37812311-37812380)
chr2 (178-251)||(2324482-2324559)
chr2 (178-259)||(5509087-5509172)
chr2 (164-212)||(19544413-19544460)
chr2 (174-213)||(9927915-9927954)
chr2 (174-266)||(33606273-33606369)
chr2 (174-266)||(36352143-36352239)
chr2 (174-212)||(5711481-5711519)
chr2 (180-251)||(8424898-8424973)
chr2 (142-296)||(10522991-10523147)
chr2 (174-212)||(11020562-11020600)
chr2 (174-212)||(16533551-16533589)
chr2 (178-212)||(32884115-32884149)
chr2 (149-211)||(40149271-40149332)
chr2 (178-252)||(19191608-19191686)
chr2 (142-191)||(19544313-19544362)
chr2 (142-191)||(21089319-21089368)
chr2 (244-296)||(13210604-13210656)
chr2 (170-210)||(13296398-13296438)
chr2 (174-210)||(44403970-44404006)
[»] chr6 (46 HSPs)
chr6 (174-296)||(4868767-4868893)
chr6 (178-256)||(27772722-27772804)
chr6 (142-206)||(12319722-12319786)
chr6 (178-259)||(21690730-21690815)
chr6 (142-259)||(30256785-30256905)
chr6 (142-213)||(12329985-12330056)
chr6 (174-296)||(15082097-15082223)
chr6 (142-296)||(9704992-9705150)
chr6 (174-296)||(12330134-12330259)
chr6 (142-210)||(3823276-3823344)
chr6 (142-210)||(7638634-7638702)
chr6 (178-259)||(8026397-8026482)
chr6 (142-259)||(33494511-33494632)
chr6 (149-211)||(2736445-2736507)
chr6 (149-211)||(2737213-2737275)
chr6 (142-212)||(17147702-17147772)
chr6 (178-259)||(27653225-27653310)
chr6 (174-212)||(4868619-4868657)
chr6 (142-212)||(6237744-6237814)
chr6 (174-212)||(9705258-9705296)
chr6 (142-212)||(30849444-30849514)
chr6 (142-207)||(2736214-2736279)
chr6 (178-296)||(8001504-8001626)
chr6 (174-296)||(13353205-13353330)
chr6 (143-212)||(16722849-16722918)
chr6 (149-210)||(19639157-19639218)
chr6 (174-296)||(33796330-33796455)
chr6 (168-259)||(5572607-5572701)
chr6 (178-231)||(27772954-27773011)
chr6 (149-212)||(6542985-6543048)
chr6 (178-212)||(19712722-19712756)
chr6 (142-212)||(28867999-28868069)
chr6 (174-211)||(2753262-2753299)
chr6 (174-211)||(3680250-3680287)
chr6 (142-211)||(6400663-6400732)
chr6 (146-211)||(10145793-10145858)
chr6 (144-209)||(11085787-11085852)
chr6 (142-211)||(12199848-12199917)
chr6 (144-209)||(15102976-15103041)
chr6 (170-211)||(15600936-15600977)
chr6 (142-296)||(24554089-24554245)
chr6 (142-191)||(24837117-24837166)
chr6 (150-210)||(6054383-6054443)
chr6 (108-136)||(25096427-25096455)
chr6 (174-210)||(31961182-31961218)
chr6 (163-207)||(33631851-33631895)
[»] chr7 (60 HSPs)
chr7 (164-296)||(25620130-25620265)
chr7 (142-282)||(20305631-20305775)
chr7 (142-249)||(43085538-43085650)
chr7 (174-296)||(26239870-26239996)
chr7 (174-296)||(29469609-29469734)
chr7 (142-211)||(36277269-36277338)
chr7 (142-239)||(18826499-18826600)
chr7 (142-266)||(26562057-26562185)
chr7 (175-287)||(40898885-40899001)
chr7 (142-249)||(43075311-43075423)
chr7 (184-294)||(44342885-44342998)
chr7 (142-212)||(22574808-22574877)
chr7 (178-257)||(34027401-34027484)
chr7 (142-211)||(43089251-43089321)
chr7 (142-212)||(47710415-47710485)
chr7 (142-212)||(47722071-47722141)
chr7 (174-252)||(29469844-29469926)
chr7 (142-259)||(33996302-33996423)
chr7 (146-210)||(35308190-35308254)
chr7 (142-210)||(44874390-44874458)
chr7 (142-259)||(48661546-48661667)
chr7 (142-212)||(1793720-1793788)
chr7 (142-188)||(28080637-28080683)
chr7 (174-212)||(48243103-48243141)
chr7 (142-207)||(6001482-6001547)
chr7 (149-210)||(15317532-15317592)
chr7 (174-296)||(21861298-21861423)
chr7 (142-211)||(42985166-42985235)
chr7 (149-210)||(47849550-47849611)
chr7 (178-259)||(2544438-2544523)
chr7 (174-210)||(4454780-4454816)
chr7 (168-212)||(10882047-10882091)
chr7 (142-259)||(17202151-17202272)
chr7 (177-213)||(30727159-30727195)
chr7 (142-249)||(43688161-43688271)
chr7 (174-296)||(1596598-1596722)
chr7 (142-213)||(6634827-6634898)
chr7 (149-249)||(14540742-14540846)
chr7 (158-212)||(32879656-32879711)
chr7 (142-212)||(47849764-47849832)
chr7 (393-423)||(3038079-3038109)
chr7 (174-212)||(3038126-3038164)
chr7 (142-212)||(3392954-3393024)
chr7 (174-212)||(3520082-3520120)
chr7 (142-211)||(8075826-8075900)
chr7 (142-212)||(11211721-11211790)
chr7 (178-212)||(21054995-21055029)
chr7 (172-210)||(21473109-21473147)
chr7 (174-212)||(21861533-21861571)
chr7 (142-212)||(22574577-22574647)
chr7 (142-212)||(23839119-23839189)
chr7 (142-212)||(31892359-31892429)
chr7 (142-212)||(48243479-48243549)
chr7 (155-212)||(31485701-31485758)
chr7 (393-422)||(36993070-36993099)
chr7 (157-210)||(40898759-40898812)
chr7 (174-210)||(23796228-23796264)
chr7 (174-210)||(31485468-31485504)
chr7 (168-212)||(31892149-31892193)
chr7 (144-212)||(40792839-40792907)
[»] chr8 (63 HSPs)
chr8 (149-296)||(20301240-20301390)
chr8 (149-296)||(21087872-21088022)
chr8 (178-259)||(17469826-17469911)
chr8 (142-212)||(12688279-12688349)
chr8 (174-296)||(8084131-8084256)
chr8 (142-296)||(24532376-24532533)
chr8 (155-212)||(38447469-38447526)
chr8 (142-259)||(4828040-4828161)
chr8 (174-259)||(12317050-12317139)
chr8 (178-259)||(19256811-19256896)
chr8 (142-213)||(8466765-8466836)
chr8 (142-249)||(22638180-22638291)
chr8 (142-212)||(39052971-39053041)
chr8 (174-296)||(28213058-28213183)
chr8 (149-210)||(34236692-34236753)
chr8 (178-251)||(17477073-17477150)
chr8 (156-212)||(20301487-20301543)
chr8 (156-212)||(21088119-21088175)
chr8 (175-296)||(37868538-37868662)
chr8 (163-296)||(41790652-41790787)
chr8 (149-212)||(4873733-4873795)
chr8 (142-212)||(4828265-4828335)
chr8 (174-212)||(5931991-5932029)
chr8 (174-297)||(5932138-5932264)
chr8 (142-212)||(7729913-7729983)
chr8 (142-212)||(10449972-10450042)
chr8 (174-212)||(25325650-25325688)
chr8 (142-249)||(28069358-28069469)
chr8 (146-212)||(29005840-29005906)
chr8 (142-204)||(29006063-29006125)
chr8 (174-211)||(7669645-7669682)
chr8 (142-296)||(10614894-10615051)
chr8 (174-296)||(11232384-11232509)
chr8 (178-252)||(24075304-24075382)
chr8 (142-211)||(29907769-29907838)
chr8 (177-259)||(37001233-37001319)
chr8 (142-190)||(6462931-6462979)
chr8 (174-259)||(11232185-11232274)
chr8 (178-251)||(19256585-19256662)
chr8 (94-137)||(7658453-7658496)
chr8 (178-213)||(18939338-18939373)
chr8 (177-212)||(38475754-38475789)
chr8 (142-212)||(39960163-39960234)
chr8 (142-212)||(5590410-5590480)
chr8 (142-212)||(5940030-5940100)
chr8 (150-212)||(8928997-8929059)
chr8 (170-212)||(12688072-12688114)
chr8 (142-249)||(15042671-15042782)
chr8 (222-296)||(26208203-26208277)
chr8 (142-212)||(30201566-30201636)
chr8 (142-212)||(31079841-31079911)
chr8 (178-212)||(34843125-34843159)
chr8 (174-212)||(35682823-35682861)
chr8 (178-212)||(39984822-39984856)
chr8 (142-212)||(45031403-45031473)
chr8 (175-212)||(31079604-31079641)
chr8 (175-212)||(42049729-42049766)
chr8 (144-212)||(422259-422327)
chr8 (174-213)||(3157367-3157407)
chr8 (142-210)||(3961443-3961511)
chr8 (161-282)||(27439516-27439640)
chr8 (164-212)||(30966109-30966157)
chr8 (174-210)||(39052581-39052617)
[»] chr1 (51 HSPs)
chr1 (138-212)||(40079120-40079194)
chr1 (149-213)||(31181554-31181618)
chr1 (142-212)||(42586481-42586550)
chr1 (174-296)||(38733156-38733280)
chr1 (174-258)||(4112998-4113086)
chr1 (135-213)||(52650812-52650891)
chr1 (142-212)||(25145762-25145832)
chr1 (142-211)||(4098445-4098514)
chr1 (174-320)||(8870841-8870990)
chr1 (142-296)||(32783236-32783392)
chr1 (178-259)||(3169774-3169859)
chr1 (134-213)||(15986374-15986454)
chr1 (142-210)||(16163139-16163207)
chr1 (178-259)||(51589814-51589899)
chr1 (156-296)||(39348307-39348450)
chr1 (142-212)||(2859434-2859504)
chr1 (142-212)||(17452870-17452940)
chr1 (175-213)||(31004478-31004516)
chr1 (142-212)||(35772236-35772306)
chr1 (178-249)||(41035828-41035903)
chr1 (175-213)||(52907389-52907427)
chr1 (150-211)||(5109465-5109525)
chr1 (174-211)||(8870732-8870769)
chr1 (142-211)||(25145528-25145597)
chr1 (178-252)||(52127729-52127806)
chr1 (160-212)||(7465687-7465739)
chr1 (156-212)||(17452721-17452777)
chr1 (156-212)||(38668111-38668167)
chr1 (178-259)||(51589000-51589085)
chr1 (178-259)||(51589234-51589319)
chr1 (149-212)||(26865400-26865463)
chr1 (142-212)||(2859669-2859739)
chr1 (142-212)||(4112582-4112652)
chr1 (99-137)||(10572615-10572653)
chr1 (178-212)||(12245004-12245038)
chr1 (108-138)||(14332667-14332697)
chr1 (142-208)||(17468316-17468382)
chr1 (142-212)||(21765096-21765165)
chr1 (174-212)||(25713397-25713435)
chr1 (174-212)||(26173266-26173304)
chr1 (142-212)||(38080577-38080646)
chr1 (174-211)||(369639-369676)
chr1 (162-211)||(12376480-12376529)
chr1 (174-207)||(20208573-20208606)
chr1 (142-207)||(26177115-26177180)
chr1 (108-137)||(34298440-34298469)
chr1 (243-296)||(44254140-44254193)
chr1 (175-212)||(49142958-49142995)
chr1 (109-137)||(7918237-7918265)
chr1 (143-210)||(9632196-9632264)
chr1 (142-206)||(17412308-17412372)
[»] scaffold0041 (2 HSPs)
scaffold0041 (175-287)||(67283-67399)
scaffold0041 (157-210)||(67472-67525)
[»] scaffold0766 (1 HSPs)
scaffold0766 (174-212)||(6278-6316)
[»] scaffold0692 (2 HSPs)
scaffold0692 (174-296)||(5709-5834)
scaffold0692 (174-212)||(5586-5624)
[»] scaffold0519 (2 HSPs)
scaffold0519 (174-296)||(1920-2045)
scaffold0519 (174-212)||(2155-2193)
[»] scaffold0129 (1 HSPs)
scaffold0129 (174-296)||(14307-14432)
[»] scaffold0083 (1 HSPs)
scaffold0083 (174-211)||(51240-51277)
[»] scaffold0481 (1 HSPs)
scaffold0481 (142-259)||(3462-3583)
[»] scaffold0334 (1 HSPs)
scaffold0334 (178-212)||(4471-4505)
[»] scaffold0400 (1 HSPs)
scaffold0400 (174-259)||(3848-3938)
[»] scaffold0365 (1 HSPs)
scaffold0365 (174-259)||(4492-4582)
[»] scaffold0085 (1 HSPs)
scaffold0085 (108-137)||(26397-26426)
[»] scaffold0459 (1 HSPs)
scaffold0459 (174-210)||(13337-13373)
[»] scaffold0366 (2 HSPs)
scaffold0366 (174-210)||(10978-11014)
scaffold0366 (174-210)||(14644-14680)
[»] scaffold0050 (1 HSPs)
scaffold0050 (178-210)||(69577-69609)
[»] scaffold0036 (1 HSPs)
scaffold0036 (101-137)||(9773-9809)
[»] scaffold0005 (1 HSPs)
scaffold0005 (178-259)||(56467-56552)


Alignment Details
Target: chr4 (Bit Score: 407; Significance: 0; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 9 - 483
Target Start/End: Original strand, 40964908 - 40965382
Alignment:
Q  9 acatcatcagtactactaaaataaaatacaaatgaagtacttgtcaaacacagatacggacacaaacccaacatgacacaggcattcgatacgccgatgc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||| |||||||||||| |    
T  40964908 acatcataagtactactaaaataaaatacaaatgaagtacttgtcaagcacagatacgaacacaaacccgacatgacacaggcatccgatacgccgattc 40965007  T
Q  109 cactaataatttgagaaaatcacataatttgttagagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcac 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||||||||    
T  40965008 cactaataatttgagaaaatcacataatttgttagagtctcacattggataagagatgacctgataatgcgtatataagtgggtgcaatcatcacctcac 40965107  T
Q  209 aagctttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatcacaccacccatcg 308  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40965108 aagctttgtggaattgtgttaagttcaaccacaatttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatcacaccacccatca 40965207  T
Q  309 ttcatgtccacgctctagatgtatgtacagtcctgggcgttaggcccaaccactacgctctagatgtatgtacacagtcttggatgttaggcccaaccat 408  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40965208 ttcatgtctacgctctagatgtatgtacagtcctgggcgttaggcccaaccactacgctctagatgtatgtacacagtcttggatgttaggcccaaccat 40965307  T
Q  409 gatttctaagataattttgtgtaattatatgtagtgtccggcaccaagacacgcctaatttgaggagtgtcggtg 483  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  40965308 aatttctaagataattttgtgtaattatatgtagtgtccgacaccaagacacgcctaatctgaggagtgtcggtg 40965382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 35788663 - 35788789
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||||||||||    ||| |||  |||||||| |  |||||||| ||||||| ||||||||| || ||||||    
T  35788663 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctc 35788762  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     |||||||||||| |||| ||||||||    
T  35788763 caagatccgttgggccacctgctatca 35788789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 296
Target Start/End: Original strand, 52559541 - 52559698
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaacca 239  Q
    |||||||||||||||| || ||||| ||| |||||||||||||||||| |||||| |||||||||||||    |||||||  |||||||| |  ||||||    
T  52559541 agtctcacattggatatgacatgacctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaacca 52559640  T
Q  240 cggtttctaatatggtatcatagtctcctctaagatccg-ttggaccacatgctatca 296  Q
     | ||||||| || |||||| || |||||| |||||||| |||| |||| ||||||||    
T  52559641 tgatttctaagatagtatcagagcctcctcaaagatccgtttgggccacctgctatca 52559698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 249
Target Start/End: Original strand, 6218411 - 6218522
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    ||||||||||||  |||| |||||||| | | |||||||||||||||||| |||||| |||||||||||||    ||| ||||||||||||| | |||||    
T  6218411 agagtctcacatcagataggagatgacctaacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttatggaattgtgttaggctcaac 6218510  T
Q  238 cacggtttctaa 249  Q
    |||| |||||||    
T  6218511 cacgatttctaa 6218522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 28245638 - 28245568
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| | |||| | ||| |||||||||||||||||| ||||||||||||||||||||    
T  28245638 agagtctcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagc 28245568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 296
Target Start/End: Complemental strand, 30566127 - 30565988
Alignment:
Q  161 gagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggta 256  Q
    |||| ||| ||| |||||||||||||||||| ||||| ||||| ||| ||||    ||||| |  ||||||||||  |||||||| ||||| | ||||||    
T  30566127 gagaagacctgacaatgtgtttataagtgggagcaattctcacatcataagccagttttgtaggtttgtgttaagcccaaccacgttttcttagatggta 30566028  T
Q  257 tcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    | | || |||||||||||||| ||||||||| ||||||||    
T  30566027 tgagagcctcctctaagatccattggaccacttgctatca 30565988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 44118971 - 44118901
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| |||||||||||| | ||| |||||||||||||||||| | ||||||||||||||||||    
T  44118971 agagtcccacatcggataagagatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagc 44118901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 21750152 - 21750084
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||| ||||||||||||| |||| ||| | |||||||||||| ||| ||||||||||||||||    
T  21750152 agtctcacatcggataagagatgatatgacaatatctttataagtgggagcattcctcacctcacaagc 21750084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 50543679 - 50543558
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| | |||| | ||| ||||||| |||||||||| ||||||||||||||||||||    |||||||| |||||||| |  ||||    
T  50543679 agagtcccacatcggataggtgatggcctgacaatgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaac 50543580  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||| ||||||| ||| |||||    
T  50543579 cacgatttctaagatgatatca 50543558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 53815005 - 53814920
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| |||||||||||||||||||     |||||||  ||||||||||  |||||||| |||||||||||||||||    
T  53815005 tgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatca 53814920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 39902675 - 39902604
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||| ||||| ||||| || ||| | ||| |||||||||||||||||| |||||||||||||||||||||    
T  39902675 agagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagct 39902604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 22827510 - 22827580
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| |||||| | ||| || ||||||||||||||| ||||||||||||||||||||    
T  22827510 agagtcccacatcggataggagatggcctgacaacgtgtttataagtgggggcaatcctcacctcacaagc 22827580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 161 - 296
Target Start/End: Complemental strand, 35797070 - 35796932
Alignment:
Q  161 gagatgacatgataatgtgtttataagtgggtgcaatcctcacctcaca----agctttgtggaattgtgttaagttcaaccacggtttctaatatggta 256  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||||    || |||||||  ||||||||||  |||| ||  ||||||| ||||||    
T  35797070 gagatgacatgacaatatgtttataagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaagcccaactaccatttctaagatggta 35796971  T
Q  257 tcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    ||| || ||| ||  |||||| |||||| || ||||||||    
T  35796970 tcagagcctcttc-gagatccattggactacctgctatca 35796932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 6218176 - 6218333
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| ||||| |||||| | | | ||| |||||||||||||| |||||| |||||||||||    | |||||||| ||||||||    ||||    
T  6218176 agagtctcacatcggataggagatggcttcacaatatgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaac 6218275  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||| ||||||| ||||||||| || || ||| ||||||| ||||| ||| | ||||||    
T  6218276 cacgatttctaagatggtatcagagcct-ctccaagatccattggatcacctactatca 6218333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 296
Target Start/End: Complemental strand, 22231412 - 22231263
Alignment:
Q  150 acattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggttt 245  Q
    |||| ||||| || ||||| ||| ||| | |||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| |||    
T  22231412 acatcggatatgatatgacctgagaatatatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 22231313  T
Q  246 ctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||| ||||||||| || || ||| || |||| |||| |||| ||||||||    
T  22231312 ctaagatggtatcagagcct-ctccaaaatccattgggccacctgctatca 22231263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 32334021 - 32333956
Alignment:
Q  143 gagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcac 208  Q
    ||||| |||||||||||||||||||| |||  |||||||||||||||||  |||||||||| ||||    
T  32334021 gagtcgcacattggataagagatgacctgaacatgtgtttataagtggggacaatcctcacttcac 32333956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 400677 - 400556
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    ||||||||||||  |||| ||||||   ||| |||||||||||||||||| | ||||||||||||||||||    ||||||   |||||||||| |||||    
T  400677 agagtctcacatcagatatgagatggtctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgttaagctcaac 400578  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||  |||||||  ||||||||    
T  400577 cacaatttctaacctggtatca 400556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 5846154 - 5846239
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||| ||||    |||||||  ||| |||| | ||||||||| |||||||||||||||||    
T  5846154 tgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgcgttaggctcaaccacgatttctaatatggtatca 5846239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 21498362 - 21498447
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  || ||||| |  |||||||| |||||||||||||||||    
T  21498362 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaatatggtatca 21498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 27634193 - 27634125
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| ||||| ||||| || ||| | ||| |||||||||||||||||| ||||||||||||||||||    
T  27634193 agagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaa 27634125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 35796828 - 35796784
Alignment:
Q  168 catgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  35796828 catgacaatgtgtttataagtgggggcaatcctcacctcacaagc 35796784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 980162 - 980091
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||| ||||| || || ||| |||| ||| ||| |||||||||||||| |||||||||||||||||||||    
T  980162 agagtcccacatcggttaggagttgacctgagaatttgtttataagtgggggcaatcctcacctcacaagct 980091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 24513431 - 24513314
Alignment:
Q  182 tataagtgggtgcaatcctcacctcacaagc---tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctctaagatccg 278  Q
    |||||||||| ||||||||||||||||||||   ||||| |  |||||||| |  ||| |||| ||||||| ||| ||||| || |||||||||||||      
T  24513431 tataagtgggggcaatcctcacctcacaagccggtttgtagggttgtgttaggcccaatcacgatttctaacatgatatcagagcctcctctaagatcta 24513332  T
Q  279 ttggaccacatgctatca 296  Q
    ||||||||  ||||||||    
T  24513331 ttggaccatctgctatca 24513314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 52559783 - 52559846
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| ||||| || ||||| ||| |||||||||||||||||| ||||| ||||||||||||||    
T  52559783 cacatcggataggacatgacttgacaatgtgtttataagtgggagcaattctcacctcacaagc 52559846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 2261863 - 2261752
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcaca----agctttgtggaattgtgttaagttcaacca 239  Q
    ||||||||||||| || ||| || | ||| ||| | ||||||||||||  ||||||||||||||||    || |||||||  ||||||||||||||||||    
T  2261863 agtctcacattggttaggaggtggcctgacaatttatttataagtggggacaatcctcacctcacagaccagttttgtggggttgtgttaagttcaacca 2261764  T
Q  240 cggtttctaata 251  Q
    |  |||||||||    
T  2261763 ccatttctaata 2261752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 5846351 - 5846421
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| || || ||| || ||||| ||| |||||||||||||| ||||||||||||||||||||    
T  5846351 agagtcccacatcggttaggagttggcatgacaatttgtttataagtgggggcaatcctcacctcacaagc 5846421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 11036826 - 11036788
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11036826 aatgtgtttataagtgggggcaatcctcacctcacaagc 11036788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 21684970 - 21685040
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| || ||| | ||| ||||||||||||||||||   ||||||||||||||||||    
T  21684970 agagtctcacatcggataggacatggcctgacaatgtgtttataagtgggataaatcctcacctcacaagc 21685040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 22863446 - 22863516
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||| |  ||||| | ||| |||||||||||||||||| |||||||||||| |||||||    
T  22863446 agagtctcacatcggacagaagatggcctgacaatgtgtttataagtgggggcaatcctcaccccacaagc 22863516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 27464360 - 27464290
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| |||||||||||  | ||| || ||||||||||||||  ||||||||||||||||||||    
T  27464360 agagtcccacatcggataagagatttcctgacaaagtgtttataagtggaggcaatcctcacctcacaagc 27464290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 27634628 - 27634558
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| || ||| | ||| ||||||||||| |||||| ||||||||||||||||||||    
T  27634628 agagtcccacatcggataggacatggcctgacaatgtgtttatgagtgggggcaatcctcacctcacaagc 27634558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 28246165 - 28246127
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28246165 aatgtgtttataagtgggggcaatcctcacctcacaagc 28246127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 35645845 - 35645807
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  35645845 aatgtgtttataagtgggggcaatcctcacctcacaagc 35645807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 11036602 - 11036553
Alignment:
Q  163 gatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||| ||||||||||||||| || |||||| |||||||||||||    
T  11036602 gatgacatgacaatgtgtttataagttggggcaatcatcacctcacaagc 11036553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 20821981 - 20822059
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatat 252  Q
    |||||||||||||| ||||| ||||||||||||||    ||||||| ||||||||| |  |||||||| ||||||||||    
T  20821981 tgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaatat 20822059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 18528329 - 18528261
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||||||   ||| |||||| ||||  |||||||||||||||||  ||||||||||||||||||    
T  18528329 agagtctcacatcaaatacgagatggcatggcaatgtgtttataagtggcggcaatcctcacctcacaa 18528261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 20726916 - 20726872
Alignment:
Q  162 agatgacatgataatgtgtttataagtgggtgcaatcctcacctc 206  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||    
T  20726916 agatgacatgaacatgtgtttataagtgggggcaatcctcacctc 20726872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 21498803 - 21498880
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaata 251  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| |||||||||    
T  21498803 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 21498880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 31254519 - 31254451
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| ||||| ||||| | |||| | ||| |||||||||||||||||| ||||||||||||| ||||    
T  31254519 agagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaa 31254451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 40717525 - 40717432
Alignment:
Q  170 tgataatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    ||||||| |||||||||||||| ||||||||||||||| ||    | |||||||  |||||||| |  |||||||| ||||||| |||||||||    
T  40717525 tgataatttgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 40717432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 1518137 - 1518257
Alignment:
Q  143 gagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaacc 238  Q
    ||||| ||||| || || ||| |||| ||| ||| |||||||||||||| |||||||||| |||||||||    |||||||  |||||||| |   ||||    
T  1518137 gagtcccacatcggttaggagttgacctgacaatttgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaacc 1518236  T
Q  239 acggtttctaatatggtatca 259  Q
    ||| ||||||| |||||||||    
T  1518237 acgatttctaagatggtatca 1518257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 50859015 - 50859050
Alignment:
Q  177 gtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||||||| ||||||||||||||||||    
T  50859015 gtgtttataagtgggtgaaatcctcacctcacaagc 50859050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 847946 - 847984
Alignment:
Q  99 acgccgatgccactaataatttgagaaaatcacataatt 137  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  847946 acgccgatgccgctaataatttgagaaaattacataatt 847984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 138
Target Start/End: Complemental strand, 7214577 - 7214547
Alignment:
Q  108 ccactaataatttgagaaaatcacataattt 138  Q
    |||||||||||||||||||||||||||||||    
T  7214577 ccactaataatttgagaaaatcacataattt 7214547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 9279199 - 9279265
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcac 208  Q
    |||||| ||||| ||||| | |||| | ||| |||||||||||||||||| |||||| |||||||||    
T  9279199 agagtcgcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcatcacctcac 9279265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 9685640 - 9685674
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  9685640 tgtttataagtgggggcaatcctcacctcacaagc 9685674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 138
Target Start/End: Complemental strand, 21658869 - 21658839
Alignment:
Q  108 ccactaataatttgagaaaatcacataattt 138  Q
    |||||||||||||||||||||||||||||||    
T  21658869 ccactaataatttgagaaaatcacataattt 21658839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 22231153 - 22231115
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  22231153 aatgtgtttataagtggggacaatcctcacctcacaagc 22231115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 22845527 - 22845489
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  22845527 aatgtgtttataagtgggggtaatcctcacctcacaagc 22845489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 35609567 - 35609533
Alignment:
Q  177 gtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    ||||||||||||||| |||||||||||||||||||    
T  35609567 gtgtttataagtgggggcaatcctcacctcacaag 35609533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 35788898 - 35788936
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  35788898 aatgtgtttataagtgggggcaatcctcatctcacaagc 35788936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 2221047 - 2221010
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  2221047 atgtgtttataggtgggggcaatcctcacctcacaagc 2221010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 13637376 - 13637429
Alignment:
Q  157 ataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||| ||| ||||||||||||||| || |||||| |||| ||||||    
T  13637376 ataagagatgacttgacaatgtgtttataagtaggggcaatcttcacttcacaa 13637429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 17222727 - 17222694
Alignment:
Q  179 gtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||| ||||||||||||||||||||    
T  17222727 gtttataagtgggggcaatcctcacctcacaagc 17222694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 137
Target Start/End: Original strand, 36635328 - 36635357
Alignment:
Q  108 ccactaataatttgagaaaatcacataatt 137  Q
    ||||||||||||||||||||||||||||||    
T  36635328 ccactaataatttgagaaaatcacataatt 36635357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 53699014 - 53699067
Alignment:
Q  157 ataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||  ||| ||| |||||||||||| | ||||||||||||||||||    
T  53699014 ataagagatgatctgacaatatgtttataagtgtgggcaatcctcacctcacaa 53699067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 136
Target Start/End: Original strand, 1074802 - 1074830
Alignment:
Q  108 ccactaataatttgagaaaatcacataat 136  Q
    |||||||||||||||||||||||||||||    
T  1074802 ccactaataatttgagaaaatcacataat 1074830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 14783263 - 14783178
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    ||||||||| || | |||||| |||||||||||||    |||||||  |||||||| |  |||||||| |||||||||||||||||    
T  14783263 tgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 14783178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 16066073 - 16066105
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||||| ||||||||||||||||||    
T  16066073 tgtttataagtgggggcaatcctcacctcacaa 16066105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 20095264 - 20095332
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||||||  ||||| ||||| |||||||||||||||| || ||||  |||||  ||||||||||    
T  20095264 agagtctcacatcagataatagatggcatgataatgtgtttagaaatggggacaatctccacctcacaa 20095332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 25052860 - 25052945
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| | ||||| ||||||||||||    |||||||  |||||||| |  |||||||| ||||||| |||||||||    
T  25052860 tgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaacatggtatca 25052945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 50543410 - 50543321
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    ||||||| |||||||||| |||||||||||| |||||||    |||||||  |||||||| |  |||||||| ||||||| ||| |||||    
T  50543410 aatgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatgttatca 50543321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 421
Target Start/End: Original strand, 52559626 - 52559654
Alignment:
Q  393 tgttaggcccaaccatgatttctaagata 421  Q
    |||||||||||||||||||||||||||||    
T  52559626 tgttaggcccaaccatgatttctaagata 52559654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 53814750 - 53814673
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaata 251  Q
    ||||||||||||||   ||||||||||||||||||    ||||||| ||||||||| |  |||||||| |||||||||    
T  53814750 tgtttataagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaata 53814673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 53828599 - 53828514
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||| ||||    |||||||  |||||||| |  |||||||  ||||||| |||||||||    
T  53828599 tgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatca 53828514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 16239563 - 16239721
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| ||||| || ||| | ||| |||||||||||||||||| |||| |||||||||||||||    ||||||| ||||||||| |  ||||    
T  16239563 agagtctcacatcggataggacatggcctgacaatgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttaggcccaac 16239662  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||| ||||||| ||||||||| || |||||| |||||||||| | |||| ||||||||    
T  16239663 cacgatttctaagatggtatcagagcctcctccaagatccgtttggccacctgctatca 16239721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 31317201 - 31317361
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| |||||||| ||  ||||  |||||||||||||||||| ||||||||||||||||||||    ||||||| ||||||||| | |||||    
T  31317201 agagtcccacatcggataagacatagcatggcaatgtgtttataagtggg-gcaatcctcacctcacaagccggttttgtgggattgtgttaggctcaac 31317299  T
Q  238 cacggtttctaatatggt---atcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||| ||||||| |||||   |||| |||||| || ||||||||||||||||| | ||||||    
T  31317300 cacgatttctaagatggtggtatcagagtctcttccaagatccgttggaccacctactatca 31317361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 41915143 - 41915211
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| ||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  41915143 agagtcccacattggaaaagagatgacatgaacatgtgtttataagtgggggcaatcctcacctcacaa 41915211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 144 - 296
Target Start/End: Complemental strand, 12930238 - 12930082
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaacca 239  Q
    |||||||||| |||||||||||||| ||| |||||||| ||| |||||  |||| ||||| ||||||||    |||||||  |||||||| |  ||||||    
T  12930238 agtctcacatcggataagagatgacctgacaatgtgttcatatgtggggacaattctcacttcacaagccggttttgtggggttgtgttaggcccaacca 12930139  T
Q  240 cggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |  ||||||| ||||||||| || |||||| | |||||||||| |||| ||||||||    
T  12930138 ccatttctaagatggtatcaaagcctcctccatgatccgttgggccacctgctatca 12930082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 11589757 - 11589878
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| || || ||| || | ||| ||| |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  ||||    
T  11589757 agagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 11589856  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||| |||||||||||||||||    
T  11589857 cacgatttctaatatggtatca 11589878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 16927029 - 16926933
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctc 266  Q
    |||||||||||||||||| | |||||||| |||||||||    |||||||  |||||||||| ||||||||| ||||||| ||||||||| ||||||    
T  16927029 aatgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagctcaaccacgatttctaagatggtatcagagtctc 16926933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 295
Target Start/End: Original strand, 39620099 - 39620221
Alignment:
Q  176 tgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctcta 271  Q
    |||||||||||||||| | | ||||||| ||||||||    ||||  || |||||||||||||||||||| ||||||| ||||||||| || |||||| |    
T  39620099 tgtgtttataagtggg-gtagtcctcacttcacaagccggttttgaagagttgtgttaagttcaaccacgatttctaagatggtatcagagcctcctcca 39620197  T
Q  272 agatccgttggaccacatgctatc 295  Q
    ||||| ||||| |||| |||||||    
T  39620198 agatctgttgggccacctgctatc 39620221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 30179820 - 30179751
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||| |||||  ||||||||||||| ||| |||||||||||||||||| | |||||||||||||||||    
T  30179820 agagtcccacatcagataagagatgacctgacaatgtgtttataagtgggggtaatcctcacctcacaag 30179751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 9272961 - 9273054
Alignment:
Q  170 tgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    ||||||| |||||||||||||| |||| |||||||||||||||    |||||||  ||||||||||  |||||||  |||||||||||||||||    
T  9272961 tgataatttgtttataagtgggggcaaccctcacctcacaagccggttttgtggggttgtgttaagcccaaccaccatttctaatatggtatca 9273054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 13575000 - 13574875
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctct 270  Q
    ||||||||||||||||| | ||||||||||||||||||    |||||||  |||||||| |  |||||||  ||||||||||||||||| || |||   |    
T  13575000 atgtgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagcctcagtt 13574901  T
Q  271 aagatccgttggaccacatgctatca 296  Q
    ||||||| |||| |||| ||||||||    
T  13574900 aagatccattgggccacctgctatca 13574875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 296
Target Start/End: Original strand, 4155331 - 4155453
Alignment:
Q  177 gtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctctaa 272  Q
    ||||||||||||||| ||||||||||||||| ||||    |||||||  |||||||| |  |||||||| ||||||| ||||||||| ||||| ||| ||    
T  4155331 gtgtttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtct-ctccaa 4155429  T
Q  273 gatccgttggaccacatgctatca 296  Q
    ||| | |||| |||| ||||||||    
T  4155430 gattcattgggccacctgctatca 4155453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 20327925 - 20327804
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctctaag 273  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||| | |||||||||||||||||  | || ||||||     
T  20327925 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagtgcct-ctctaaa 20327827  T
Q  274 atccgttggaccacatgctatca 296  Q
    |||| |||| |||| ||||||||    
T  20327826 atccattgggccacctgctatca 20327804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 54567896 - 54568021
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| | ||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||| ||||||||| || || |||    
T  54567896 aatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct-ctc 54567994  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||  |||| ||||||||    
T  54567995 caagatccattgagccacctgctatca 54568021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 1723152 - 1723067
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||| |||||||||    
T  1723152 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 1723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 35038540 - 35038419
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| | |||| | ||| |||||||||||||||||| ||||||||||||| ||||||    |||||||  |||||||| |  ||||    
T  35038540 agagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaac 35038441  T
Q  238 cacggtttctaatatggtatca 259  Q
    ||||  |||||| |||||||||    
T  35038440 cacgacttctaagatggtatca 35038419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 29576002 - 29575955
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtg 189  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  29576002 agagtctcacatcggataagagatgacctgagaatgtgtttataagtg 29575955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 45138907 - 45138844
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| ||||||||||||   ||  |||||||||||||||||| ||||||||||||||||||||    
T  45138907 cacatcggataagagatggtctggcaatgtgtttataagtgggggcaatcctcacctcacaagc 45138844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 8018976 - 8019010
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||||||||||||||||||||    
T  8018976 tgtttataagtgggtgcaatcctcacctcacaagc 8019010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 30138064 - 30138106
Alignment:
Q  170 tgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  30138064 tgataatgtgtttataagtgggggcaatcctcacctcataagc 30138106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 30147615 - 30147657
Alignment:
Q  170 tgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  30147615 tgataatgtgtttataagtgggggcaatcctcacctcataagc 30147657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 35038306 - 35038236
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| | |||| | ||| |||||||||||||||||| | ||||||||||||||||||    
T  35038306 agagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagc 35038236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 39269335 - 39269373
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  39269335 aatgtgtttataagtgggggcaatcctcacctcacaagc 39269373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 249
Target Start/End: Original strand, 39620298 - 39620409
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| ||||| | |||||| ||| |||||||||||||||||| | || || ||||||| ||||    |||||||  ||||||||||  ||||    
T  39620298 agagtctcacatcggataggtgatgacctgacaatgtgtttataagtgggggtaacccgcacctcataagccagttttgtggggttgtgttaagcccaac 39620397  T
Q  238 cacggtttctaa 249  Q
    |||| |||||||    
T  39620398 cacgatttctaa 39620409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 50083193 - 50083123
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||| ||||||| ||||||| |||| |  || |||||||||||||||||| | ||||||||||||||||||    
T  50083193 agagcctcacatcggataagtgatggcccgacaatgtgtttataagtgggggaaatcctcacctcacaagc 50083123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 54368520 - 54368558
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  54368520 aatgtgtttataagtgggggcaatcctcacctcacaagc 54368558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 2123779 - 2123848
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||| | ||||| || ||||  |||||||||||||||||||| | |||||||||||||| ||||    
T  2123779 agagtctcacgtcggataggacatgatctgataatgtgtttataagtgagggcaatcctcacctcgcaag 2123848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 2806365 - 2806328
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  2806365 atgtgtttataagtgggtggaatcctcacctcacaagc 2806328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 45139069 - 45139013
Alignment:
Q  156 gataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||| | ||| || ||||| ||||||||| ||||||||||||||||||||    
T  45139069 gataagagatggcctgacaacgtgttaataagtgggggcaatcctcacctcacaagc 45139013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 472153 - 472102
Alignment:
Q  161 gagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| | ||| |||||||||||||||||| |||||||| |||||||||||    
T  472153 gagatggcttgacaatgtgtttataagtgggggcaatccttacctcacaagc 472102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 20303169 - 20303073
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaaccacg 241  Q
    ||||| ||||| || ||| | ||| ||||| |||||||||||| ||||||||||||||||||    | ||||||| ||||||||| | |||||||||    
T  20303169 cacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgttaggctcaaccacg 20303073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 20327719 - 20327656
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| ||||| || ||| | ||| ||||| |||||||||||| ||||||||||||||||||||    
T  20327719 cacatcggataggacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaagc 20327656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 50930707 - 50930742
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||||||||||| ||||||||||||||||||    
T  50930707 atgtgtttataagtgggggcaatcctcacctcacaa 50930742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 22729072 - 22729142
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| ||||||   ||| |||||||||| ||||||| ||||||||||| ||||||||    
T  22729072 agagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagc 22729142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 23691268 - 23691234
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  23691268 tgtttataagtgggggcaatcctcacctcacaagc 23691234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 23691500 - 23691466
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  23691500 tgtttataagtgggggcaatcctcacctcacaagc 23691466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 23708068 - 23708034
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  23708068 tgtttataagtgggggcaatcctcacctcacaagc 23708034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 23708300 - 23708266
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  23708300 tgtttataagtgggggcaatcctcacctcacaagc 23708266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 23726524 - 23726490
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  23726524 tgtttataagtgggggcaatcctcacctcacaagc 23726490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 23726756 - 23726722
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  23726756 tgtttataagtgggggcaatcctcacctcacaagc 23726722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 23744980 - 23744946
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  23744980 tgtttataagtgggggcaatcctcacctcacaagc 23744946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 23745212 - 23745178
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  23745212 tgtttataagtgggggcaatcctcacctcacaagc 23745178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 24063505 - 24063471
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  24063505 tgtttataagtgggggcaatcctcacctcacaagc 24063471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 24063737 - 24063703
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  24063737 tgtttataagtgggggcaatcctcacctcacaagc 24063703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 31317446 - 31317508
Alignment:
Q  150 acattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||| ||||| || ||||||||| ||||||||||||||||||   |||| |||||||||||||    
T  31317446 acatcggataggacatgacatgacaatgtgtttataagtggggaaaatcatcacctcacaagc 31317508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 1800194 - 1800255
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| |||||||||||   ||| | ||| |||||||||||| ||||||||||||||||||    
T  1800194 cacattagataagagatggtctgacagtgtatttataagtgggggcaatcctcacctcacaa 1800255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 137
Target Start/End: Original strand, 24633770 - 24633799
Alignment:
Q  108 ccactaataatttgagaaaatcacataatt 137  Q
    ||||||||||||||||||||||||||||||    
T  24633770 ccactaataatttgagaaaatcacataatt 24633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 28480563 - 28480514
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtggg 191  Q
    |||||| ||||||| |||||||||||| |||| ||| |||||||||||||    
T  28480563 agagtcccacattgtataagagatgacttgattatgagtttataagtggg 28480514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 28509746 - 28509697
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtggg 191  Q
    |||||| ||||||| |||||||||||| |||| ||| |||||||||||||    
T  28509746 agagtcccacattgtataagagatgacttgattatgagtttataagtggg 28509697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 49629585 - 49629645
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||||| |||||| | ||| |||||||||||||||||  ||||||| ||||||||||    
T  49629585 cacattggataggagatggc-tgaaaatgtgtttataagtggcggcaatccccacctcacaa 49629645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 41667073 - 41666947
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||| ||||||||| || ||||||    
T  41667073 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctc 41666974  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     |||||||||||| |||| ||||||||    
T  41666973 caagatccgttgggccacctgctatca 41666947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 6413536 - 6413468
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||||| ||||    
T  6413536 agtctcacattggatatgagatgacctgacaatgtgtttataagtgggggcaatcctcacctcataagc 6413468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 24531593 - 24531728
Alignment:
Q  164 atgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||| |||||||||    
T  24531593 atgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagatggtatca 24531692  T
Q  260 tagtctcctctaagatccgttggaccacatgctatca 296  Q
     || || ||||| ||||| |||| |||| ||||||||    
T  24531693 gagcct-ctctatgatccattgggccacctgctatca 24531728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 7369696 - 7369766
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| |||||||||||||||||| |||||  | ||||||||||||||| ||| ||||||||||||||||    
T  7369696 agagtcccacattggataagagatggcatgaacaagtgtttataagtgggggcagtcctcacctcacaagc 7369766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 15438849 - 15438919
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| |||||| ||||| ||||||   |||||||||||||||||||||| ||||||||||||||||||||    
T  15438849 agagtttcacatcggatatgagatggtctgataatgtgtttataagtgggggcaatcctcacctcacaagc 15438919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 15480326 - 15480451
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||||||||||    |||||||  || ||||| |  |||||||| ||||||| ||||||||| || ||| ||    
T  15480326 aatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagatggtatcagagcctcttc 15480425  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||| ||||||||    
T  15480426 -aagatccattgggccacctgctatca 15480451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 6637809 - 6637877
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| ||||| || || |||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  6637809 agagtcccacatcggttaggagatgacctgacaatgtgtctataagtgggtgcaatcctcacctcacaa 6637877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 8098326 - 8098410
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  ||||||||||  |||||||| |||||||||||||||||    
T  8098326 tgtttataagtggg-gcaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatca 8098410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 17352533 - 17352477
Alignment:
Q  156 gataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||    
T  17352533 gataagagatgacctgacaatgtgtttataagtgggggcaatcatcacctcacaagc 17352477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 16707141 - 16707066
Alignment:
Q  138 tgttagagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    ||||||| || |||||||||||| | ||||| |||  ||||||||||||||||| |||||||| ||||||||||||    
T  16707141 tgttagaatcccacattggataaaatatgacctgaacatgtgtttataagtgggggcaatcctaacctcacaagct 16707066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 24528544 - 24528667
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||| | ||||||| ||||||||| || || |||    
T  24528544 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagcct-ctc 24528642  T
Q  270 taagatccgttggaccacatgctat 294  Q
     | ||||| ||||||||| ||||||    
T  24528643 catgatccattggaccacctgctat 24528667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 30770377 - 30770306
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||||||| ||||||| || ||| | ||| |||||||||||||||||| ||||||||||||||| |||||    
T  30770377 agagtctcactttggataggacatggcttgacaatgtgtttataagtgggggcaatcctcacctcataagct 30770306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 35167506 - 35167439
Alignment:
Q  143 gagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||| || ||||||| || |||||||    
T  35167506 gagtctcacgttggataagagatgacctgacaatgtgtttataagttggggcaatccccatctcacaa 35167439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 6919539 - 6919420
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc---tttgtggaattgtgttaagttcaacc 238  Q
    |||||||||||| ||||| |||||||  ||| ||||||||||||||||||  |||| ||||||||||||||   ||||||   |||||||| | ||||||    
T  6919539 agagtctcacataggatatgagatgat-tgacaatgtgtttataagtggggacaattctcacctcacaagcagttttgtgaggttgtgttaggctcaacc 6919441  T
Q  239 acggtttctaatatggtatca 259  Q
    ||| ||| ||| |||||||||    
T  6919440 acgatttttaagatggtatca 6919420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 9368802 - 9368872
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| |||||| ||||| |||||||||||||||||| ||||| ||||| ||||||||    
T  9368802 agagtcccacatcggataggagatggcatgacaatgtgtttataagtgggggcaattctcacttcacaagc 9368872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 42295579 - 42295670
Alignment:
Q  170 tgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtat 257  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    |||||||| |||||||| |  |||| ||  |||||||||||||||    
T  42295579 tgataatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaacgacaatttctaatatggtat 42295670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 1564679 - 1564549
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcaca----agctttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||||||||||   ||| |||||| ||||||||||| ||||||||||| |||||    || |||||||  |||||||| | |||||    
T  1564679 agagtcccacatcggataagagatggtctgacaatgtgattataagtgggggcaatcctcacatcacaagacagttttgtggggttgtgttaggctcaac 1564580  T
Q  238 cacggtttctaatatggtatcatagtctcct 268  Q
    |||| ||||||| ||| ||||| || |||||    
T  1564579 cacgatttctaagatgatatcagagcctcct 1564549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 95378 - 95308
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| | |||||| ||| ||||||||||||||||||  ||||||||| |||||||||    
T  95378 agagtcacacatcggataggtgatgacctgacaatgtgtttataagtggggacaatcctcatctcacaagc 95308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 9368575 - 9368637
Alignment:
Q  150 acattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||| ||||| |||||| | ||| |||||||||||||||||  ||||||||||||||||||||    
T  9368575 acatcggataggagatggcgtgacaatgtgtttataagtggaggcaatcctcacctcacaagc 9368637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 21209997 - 21209914
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtat 257  Q
    ||||||||||||||  |||| ||||||||||||||    |||||||  ||||||||||  |||||||| |||||||||||||||    
T  21209997 tgtttataagtggggacaattctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtat 21209914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 24346613 - 24346543
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| || ||| | ||| |||||||||||||||||| | ||||||||||||||||||    
T  24346613 agagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagc 24346543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 41666837 - 41666799
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  41666837 aatgtgtttataagtgggggcaatcctcacctcacaagc 41666799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 60092 - 60129
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  60092 atgtgtttataagtgggggcaatcctcacctcacaagc 60129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 24647700 - 24647778
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttcta 248  Q
    ||||||||||||| |||  ||||||||||||||||||||    |||||||| |||||||| || |||||||| ||||||    
T  24647700 aatgtgtttataactggtggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttcta 24647778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 252
Target Start/End: Complemental strand, 27133105 - 27132991
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| || || ||| || | ||| ||| |||||||||||| | ||||||||||||||||||||    |||||||  |||||||| |  ||||    
T  27133105 agagtctcacatcggttaggagttggcctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 27133006  T
Q  238 cacggtttctaatat 252  Q
    |||| ||||||||||    
T  27133005 cacgatttctaatat 27132991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 36040560 - 36040519
Alignment:
Q  170 tgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  36040560 tgataatgtgtttataagtggttgcaatcatcacctcacaag 36040519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 6919291 - 6919243
Alignment:
Q  157 ataagagatgacatgataatgtgtttataagtgggtgcaatcctcacct 205  Q
    |||||||||||| ||| ||||||||||| |||||| |||||||||||||    
T  6919291 ataagagatgacctgacaatgtgtttattagtgggggcaatcctcacct 6919243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 33337350 - 33337282
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| ||||||||||| | |||| | ||| ||| |||||||||||||| |||||| |||||||||||    
T  33337350 agagtcccacattggataggtgatggcctgacaatatgtttataagtgggggcaatcatcacctcacaa 33337282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 3859398 - 3859351
Alignment:
Q  164 atgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    ||||| |||||||||||||||||||| |  ||||||||||||||||||    
T  3859398 atgacctgataatgtgtttataagtgaggacaatcctcacctcacaag 3859351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 6637606 - 6637731
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc---tttgtggaattgtgttaagttcaaccacggttt-ctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| | ||||||||||||||||||   |||| ||  |||| |||||  |||||||| |||  ||| ||||||||| || ||||||    
T  6637606 aatgtgtttataagtgggggtaatcctcacctcacaagccggtttgcggggttgtattaagcccaaccacgatttattaagatggtatcagagcctcctc 6637705  T
Q  270 taagatccgttggaccacatgctatc 295  Q
     | |||| ||||| |||| |||||||    
T  6637706 cacgatctgttgggccacttgctatc 6637731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 18333570 - 18333507
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| ||||| ||||||   ||| |||||||||||||||||| | ||||||||||||||||||    
T  18333570 cacatcggataggagatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagc 18333507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 35017032 - 35017071
Alignment:
Q  99 acgccgatgccactaataatttgagaaaatcacataattt 138  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  35017032 acgccgaaaccactaataatttgagaaaatcacataattt 35017071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 35167647 - 35167584
Alignment:
Q  233 tcaaccacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    ||||||||| ||||||| ||| ||||| ||||||||| |||||| ||| ||| |||||||||||    
T  35167647 tcaaccacgatttctaagatgatatcagagtctcctccaagatctgttagactacatgctatca 35167584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 37782130 - 37782091
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  37782130 aatgtgtttataagtgggggcaatcatcacctcacaagct 37782091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 2062018 - 2061980
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  2062018 aatgtgtttataagtgggggcaatcttcacctcacaagc 2061980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 11896775 - 11896729
Alignment:
Q  164 atgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||| |||||||||||| ||||||||| |||||| |||||||||||    
T  11896775 atgacttgataatgtgttaataagtgggggcaatcatcacctcacaa 11896729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 17150313 - 17150279
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcac 208  Q
    |||||||||||||||||| ||||||||||||||||    
T  17150313 aatgtgtttataagtgggggcaatcctcacctcac 17150279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 17352780 - 17352710
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| | || ||||||||| | | |||||||||||||||||| | |||| |||||||||||||    
T  17352780 agagtcccacatcgaatgagagatgacctaacaatgtgtttataagtgggggtaatcttcacctcacaagc 17352710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 19705907 - 19705986
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaa 249  Q
    |||||||||||||||||| ||||||||||||| | ||||    |||||||| |||||||| |  |||||||| |||||||    
T  19705907 aatgtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgttaggcccaaccacgatttctaa 19705986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 21306891 - 21306929
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  21306891 aatgtatttataagtgggggcaatcctcacctcacaagc 21306929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 21314729 - 21314767
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  21314729 aatgtatttataagtgggggcaatcctcacctcacaagc 21314767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 24269982 - 24269913
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| || ||| | ||| |||||||||||||||||| | ||||||||||||||||||    
T  24269982 agagtcccacatcggataggacatggcctgacaatgtgtttataagtggg-gtaatcctcacctcacaagc 24269913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 170630 - 170593
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  170630 atgtgtttataagtgggggcagtcctcacctcacaagc 170593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 2986105 - 2986003
Alignment:
Q  161 gagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaaccacggtttctaatatggta 256  Q
    |||||||||||| || |||||||||||| || ||||| ||||||| ||||    | |||||||  |||||||| | ||||||||  ||||||| ||||||    
T  2986105 gagatgacatgacaaagtgtttataagtcggggcaattctcaccttacaagttggatttgtggggttgtgttaggctcaaccaccatttctaagatggta 2986006  T
Q  257 tca 259  Q
    |||    
T  2986005 tca 2986003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 8081226 - 8081104
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagt-gggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaa 236  Q
    |||||| ||||| ||||| || ||| | ||| ||||||||||||||| ||| |||||||||| |||||||||    |||||||  |||||||| |  |||    
T  8081226 agagtcccacatcggataggacatggcctgacaatgtgtttataagtggggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaa 8081127  T
Q  237 ccacggtttctaatatggtatca 259  Q
    ||| | ||||||| |||||||||    
T  8081126 ccatgatttctaagatggtatca 8081104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 13296683 - 13296764
Alignment:
Q  180 tttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatc 258  Q
    |||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||| ||||||||    
T  13296683 tttataagtgggggcaatcctcacctcacaagccagttttgtgg-gttgtgttaggcccaaccacgatttctaagatggtatc 13296764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 30770161 - 30770096
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctca 207  Q
    |||||| ||||| ||||| || ||||| ||| ||||| |||| ||||||| |||||||||||||||    
T  30770161 agagtcccacatcggataggacatgacctgacaatgtttttaaaagtgggggcaatcctcacctca 30770096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 2985340 - 2985272
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| ||| | ||||| |||||||  ||| ||||||||||||| |||| | ||||||||||||||||    
T  2985340 agagtcacacctcggatatgagatgatctgacaatgtgtttataattgggggtaatcctcacctcacaa 2985272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 11896027 - 11895960
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||| |||||||||| | |||||| ||| ||||| |||||||||||| |||||| ||| |||||||    
T  11896027 agagtcttacattggataggtgatgacctgacaatgtatttataagtggg-gcaatcatcatctcacaa 11895960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 16293355 - 16293432
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc---tttgtggaattgtgttaagttcaaccacggtttctaa 249  Q
    |||||||||||||||||| ||||||||||| |||||| |   |||||||| |||| |||||  |||||||| |||||||    
T  16293355 aatgtgtttataagtggg-gcaatcctcacttcacaaactagtttgtggagttgtattaagcccaaccacgatttctaa 16293432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 17899539 - 17899507
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctca 207  Q
    ||||||||||||||||| |||||||||||||||    
T  17899539 atgtgtttataagtgggggcaatcctcacctca 17899507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 28510077 - 28510133
Alignment:
Q  156 gataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||| ||| ||||||||||||||||   |||||||||| |||| ||||    
T  28510077 gataagagatgacctgacaatgtgtttataagtgaaggcaatcctcatctcataagc 28510133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 29909795 - 29909718
Alignment:
Q  180 tttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatg 253  Q
    |||||||||||  ||||||||||||||||||||    |||||||| |||||||| |  |||||||  |||||||||||    
T  29909795 tttataagtggaggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccaccatttctaatatg 29909718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 30758409 - 30758341
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||| ||||| ||||| || ||| | ||| |||||||||||||| ||| ||||||||||||||| ||||    
T  30758409 agtcccacatcggataggacatggcctgacaatgtgtttataagggggggcaatcctcacctcataagc 30758341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 38731937 - 38731881
Alignment:
Q  155 ggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    ||||| |||||||  ||| |||||||||||||||| |  ||||||||||||||||||    
T  38731937 ggatatgagatgatctgacaatgtgtttataagtgagaacaatcctcacctcacaag 38731881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 38629813 - 38629953
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| |||||||| ||||||||| ||||| ||||||||| ||  ||||||||| ||||||||     ||||||||||||||||| ||||||     
T  38629813 agagtctcacatcggataagaaatgacatgacaatgtatttataagttgggacaatcctcatctcacaagtcggttttgtggaattgtgttatgttcaat 38629912  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccg 278  Q
    |||| ||| ||| ||||||||| || |||||| ||||||||    
T  38629913 cacgatttttaagatggtatcagagcctcctccaagatccg 38629953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 249
Target Start/End: Original strand, 14927074 - 14927185
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcaca----agctttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||| |    |||||||||   |||||||| | |||||    
T  14927074 agagtcacacatcggataagagatgacctgacaatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaac 14927173  T
Q  238 cacggtttctaa 249  Q
    |||| |||||||    
T  14927174 cacgatttctaa 14927185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 37812610 - 37812541
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||| ||||| |||||||| ||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  37812610 agagtcccacatcggataagacatgacctgacaatgtgtttataagtgggggcaatcctcacctcacaag 37812541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 294
Target Start/End: Original strand, 2029741 - 2029896
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| || ||||| ||| |||||||||||||||||  ||||||||||||||||||||    |||||||  |||| ||| |  ||||    
T  2029741 agagtcccacatcggataggacatgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaac 2029840  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctat 294  Q
    |||| ||||||| ||||||||| || || ||| ||||||| |||| |||| ||||||    
T  2029841 cacgatttctaagatggtatcagagcct-ctccaagatccattgggccacctgctat 2029896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 32356358 - 32356420
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacc 204  Q
    |||||||||||| ||| | |||||||||||| |||||||||||||||||| ||||||||||||    
T  32356358 agagtctcacatcggacatgagatgacatgacaatgtgtttataagtgggggcaatcctcacc 32356420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 37840309 - 37840379
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||||||||| |||||||| ||| |||||||||||||||||  |||||| |||||||||||||    
T  37840309 agagtcccacattggataggagatgacctgacaatgtgtttataagtggaggcaatcatcacctcacaagc 37840379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 5711755 - 5711629
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| |||||| |||||| | ||||    |||||||  |||||||| |  |||||||  ||||||| || |||||| || ||||||    
T  5711755 aatgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatagtatcagagcctcctc 5711656  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||||||||||||| ||||||||    
T  5711655 caagatccgttggaccacctgctatca 5711629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 3738925 - 3738973
Alignment:
Q  162 agatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  3738925 agatgacatgataatgtgtttataagtgggggcaatcctcacatcacaa 3738973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 28407869 - 28407784
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||||||||    |||||||| |||||||| |  |||||||| ||||||| |||||||||    
T  28407869 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatca 28407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 40379556 - 40379435
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| | |||| | ||| | |||||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  ||||    
T  40379556 agagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 40379457  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||| ||||||| |||||||||    
T  40379456 cacgatttctaagatggtatca 40379435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 17719372 - 17719442
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| | |||| | ||| |||||||||||||||||| ||||||||||||||||||||    
T  17719372 agagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagc 17719442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 11099715 - 11099650
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctca 207  Q
    ||||||||||||  ||||||||||||| ||| ||||||||||||||| |||||| ||||| |||||    
T  11099715 agagtctcacatcagataagagatgacctgacaatgtgtttataagttggtgcagtcctcgcctca 11099650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 2324248 - 2324333
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| ||| |||||||||||||    
T  2324248 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatca 2324333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 33606166 - 33606098
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| ||||| ||||| |||||| | ||| ||||||||||||||| || ||||||||||||||||||    
T  33606166 agagtcccacatcggataggagatggcctgaaaatgtgtttataagtaggggcaatcctcacctcacaa 33606098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 4662203 - 4662270
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcaca 209  Q
    |||||| ||||| ||||| || ||||| ||| ||| |||||||||||||| |||||||||||||||||    
T  4662203 agagtcccacatcggataggacatgacctgacaatatgtttataagtgggggcaatcctcacctcaca 4662270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 8227321 - 8227384
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacct 205  Q
    |||||| |||||||||| ||||||| |||||  | ||||||||||||||| |||||||||||||    
T  8227321 agagtcacacattggatgagagatggcatgaacaagtgtttataagtgggggcaatcctcacct 8227384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 17855041 - 17854913
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| || || ||| |||| ||| ||| |||||||||||| | ||||||||||||||||||||    |||||||  ||||| ||    ||||    
T  17855041 agagtctcacatcggttaggagttgacctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgctagacccaac 17854942  T
Q  238 cacggtttctaatatggtatcatagtctc 266  Q
    |||| ||||||||||| ||||| ||||||    
T  17854941 cacgatttctaatatgatatcagagtctc 17854913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 2029976 - 2030046
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||| | || ||||| ||| |||||||||||||||||  ||||||||||||||||||||    
T  2029976 agagtcccacatcggacatgacatgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagc 2030046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 16419506 - 16419544
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  16419506 aatgtgtttataagtgggggcaatcctcacctcacaagc 16419544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 17525418 - 17525380
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  17525418 aatgtgtttataagtgggggcaatcctcacctcacaagc 17525380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 25082649 - 25082538
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    ||||||||| ||  |||||||||||   ||| ||||||||||||||| || |||||| |||||||||||||    |||||||  |||||||| || ||||    
T  25082649 agagtctcatatcagataagagatggtctgacaatgtgtttataagtaggggcaatcatcacctcacaagccagttttgtggggttgtgttaggtccaac 25082550  T
Q  238 cacggtttctaa 249  Q
    |||| |||||||    
T  25082549 cacgatttctaa 25082538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 35418526 - 35418456
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||| |||| ||||| |||||||||| | ||| | |||||| ||||| ||||||||||||||||||||    
T  35418526 agagtcttacatcggataggagatgacataacaatatatttataggtgggggcaatcctcacctcacaagc 35418456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 36352038 - 36351968
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||| |||| ||||| |||| ||| ||| ||||||||||||||||||  |||| ||||||||||||||    
T  36352038 agagtcttacatcggataggagacgacctgacaatgtgtttataagtggggacaattctcacctcacaagc 36351968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 40149115 - 40149045
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| |||||  ||||||| | | | ||||||||||||||||  |||||||||||||||||||    
T  40149115 agagtctcacatcggatagaagatgacctaacagtgtgtttataagtggggacaatcctcacctcacaagc 40149045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 40379321 - 40379251
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| | |||| | ||| | |||||||||||||||| ||||||||||||||||||||    
T  40379321 agagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagc 40379251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 94132 - 94063
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||| ||||| ||||| | |||| | ||| | |||||||||||||||| |||||||||||||||||||    
T  94132 agagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaag 94063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 14466490 - 14466365
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||| ||||||    |||||||  |||||||| |  |||||||  ||||||| ||||||||| || || |||    
T  14466490 aatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcct-ctc 14466392  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||| || |||||    
T  14466391 caagatccattgggccacttgttatca 14466365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 19571053 - 19570975
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaag----ctttgtggaattgtgttaagttcaaccacggtttctaa 249  Q
    ||||||||||||||||| ||||||||||||||| |||     ||||||||||||||||| |  |||||||| |||||||    
T  19571053 atgtgtttataagtgggggcaatcctcacctcataagtcgattttgtggaattgtgttaggcccaaccacgatttctaa 19570975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 37812380 - 37812311
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||| ||||| ||||| || ||| | ||| ||||||||||||||||||  ||||||||||||||||||    
T  37812380 agagtcccacatcggataggacatggcctgacaatgtgtttataagtggggacaatcctcacctcacaag 37812311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 2324482 - 2324559
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaata 251  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| | ||||||||| |||| ||||    
T  2324482 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttccaata 2324559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 5509087 - 5509172
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| | ||||||||||||||||||    |||||||  |||||||| |  |||||| | |||||||||||||||||    
T  5509087 tgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatca 5509172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 19544460 - 19544413
Alignment:
Q  164 atgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  19544460 atgacctgataatgtgtttataagtgggggcaat-ctcacctcacaagc 19544413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 9927915 - 9927954
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  9927915 aatgtgtttataagtgggggtaatcctcacctcacaagct 9927954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 33606369 - 33606273
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctc 266  Q
    |||||||||||||||||| | ||||||||||||||||||    |||||||  || ||||| |  |||||||| ||||||| ||| ||||| ||||||    
T  33606369 aatgtgtttataagtgggggtaatcctcacctcacaagccagttttgtggcgttatgttaggcacaaccacgatttctaagatgatatcaaagtctc 33606273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 36352239 - 36352143
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctc 266  Q
    |||||||||||||||||| |||||| |||||||| ||||    |||||||  |||||||| ||||||||||  ||| ||| ||||||| | ||||||    
T  36352239 aatgtgtttataagtgggggcaatcatcacctcaaaagccggttttgtggggttgtgttaggttcaaccacaatttttaagatggtattagagtctc 36352143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 5711519 - 5711481
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  5711519 aatgtgtttataagtgggggcaatcctcacctaacaagc 5711481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 8424898 - 8424973
Alignment:
Q  180 tttataagtgggtgcaatcctcacctcaca----agctttgtggaattgtgttaagttcaaccacggtttctaata 251  Q
    |||||||||||| |||||| ||||||||||    || |||||||  |||||||||| ||||||||| |||||||||    
T  8424898 tttataagtgggggcaatcatcacctcacaaaccagttttgtggggttgtgttaagctcaaccacgatttctaata 8424973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 10522991 - 10523147
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||| ||| | |||| ||||||  ||| ||||||||||||| |||   ||||| ||||||| |||||    ||||||| ||||||||| |  ||||    
T  10522991 agagtctcgcatcgaataaaagatgatctgacaatgtgtttataaatggtgacaatcttcacctcgcaagccatttttgtgggattgtgttaggcccaac 10523090  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||| ||||||| |||||||  ||| |||||| |||||| |||||  ||| ||||||||    
T  10523091 cacgatttctaaaatggtat--tagcctcctccaagatctgttgggtcacctgctatca 10523147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 11020562 - 11020600
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  11020562 aatgtgtttataagtggaggcaatcctcacctcacaagc 11020600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 16533551 - 16533589
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  16533551 aatgtgtttataagtgggggcaatcctcacttcacaagc 16533589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 32884115 - 32884149
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  32884115 tgtttataagtgggggcaatcctcacctcacaagc 32884149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 40149332 - 40149271
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    ||||| ||||| |||||||| | | |||||||||||||||||| ||||| |||||||||||||    
T  40149332 cacatcggatatgagatgacctaacaatgtgtttataagtggg-gcaattctcacctcacaag 40149271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 19191686 - 19191608
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatat 252  Q
    ||||||||||||||  |||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||||||    
T  19191686 tgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 19191608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 19544362 - 19544313
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtggg 191  Q
    |||||||||||||| ||| |||||||| ||| |||| |||||||||||||    
T  19544362 agagtctcacattgaatatgagatgacctgacaatgcgtttataagtggg 19544313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 21089319 - 21089368
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtggg 191  Q
    ||||| ||||||||||| ||| ||||||||| ||||| ||||||||||||    
T  21089319 agagtttcacattggatgagatatgacatgaaaatgtatttataagtggg 21089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 13210604 - 13210656
Alignment:
Q  244 ttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||||| ||||||||| || |||||| ||||||| |||| |||||||||||||    
T  13210604 ttctaagatggtatcagagactcctccaagatccattgggccacatgctatca 13210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 13296438 - 13296398
Alignment:
Q  170 tgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||| |||||||||||||| | ||||||||||||||||    
T  13296438 tgataatatgtttataagtgggggtaatcctcacctcacaa 13296398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 44404006 - 44403970
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  44404006 aatgtgtttgtaagtgagtgcaatcctcacctcacaa 44403970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 8e-22; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 4868893 - 4868767
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||| ||||||||| || ||||||    
T  4868893 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctc 4868794  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     |||||||| ||| |||| ||||||||    
T  4868793 caagatccgctgggccacctgctatca 4868767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 27772722 - 27772804
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggta 256  Q
    |||||||||||||| ||||||||||||||||||||    |||||||| |||||||| || |||||||| ||||||||||||||    
T  27772722 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctaatatggta 27772804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 12319786 - 12319722
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctc 206  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  12319786 agagtctcacattagataagagatgacatgacaatgtgtttataagtgggggcaaccctcgcctc 12319722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 21690730 - 21690815
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| | ||||||||| |||||||||||||||||    
T  21690730 tgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaatatggtatca 21690815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 30256785 - 30256905
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| | |||||| ||| ||| |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  ||||    
T  30256785 agagtcccacatcggataggtgatgacctgacaatatgtttataagtggg-gcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 30256883  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||| |||||||||||||||||    
T  30256884 cacgatttctaatatggtatca 30256905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 12330056 - 12329985
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||| ||||| |||||||| |||| || | |||||||||||||||||| |||||||||||||||||||||    
T  12330056 agagtcccacatcggataagatatgatataacaatgtgtttataagtgggggcaatcctcacctcacaagct 12329985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 15082223 - 15082097
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||   || ||||||||||||||||    ||||||| ||||||||| |  ||| |||| ||||||||||||||||| |  ||||||    
T  15082223 aatgtgtttataagtggaa-cagtcctcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcagaacctcctc 15082125  T
Q  270 taagatccg-ttggaccacatgctatca 296  Q
    ||||||||| ||||||||| ||||||||    
T  15082124 taagatccgtttggaccacctgctatca 15082097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 9704992 - 9705150
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| ||||| || ||  | ||| |||||||||||||||||| |||||| |||||||||||    | |||||||  |||||||| |  ||||    
T  9704992 agagtctcacatcggataggacatagcctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaac 9705091  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||  ||||||| ||||||||| || |||||| |||||  ||||| |||| ||||||||    
T  9705092 caccatttctaagatggtatcagagcctcctccaagatttgttgggccacctgctatca 9705150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 12330259 - 12330134
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| |||| |||||||||||||||    ||||||   |||||||| |  |||||||| ||||||||||||||||| || || |||    
T  12330259 aatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagagcct-ctc 12330161  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||| ||||||||    
T  12330160 caagatccattgggccacctgctatca 12330134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 3823276 - 3823344
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||||||  ||||| |||| ||||||    
T  3823276 agagtctcacatcggataagagatgacctgataatttgtttataagtggggacaatcatcacatcacaa 3823344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 7638702 - 7638634
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||| |  |||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  7638702 agagtctcacgtcagataggagatgacctgataatgtgtttataagtgggggcaatcctcaccttacaa 7638634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 8026397 - 8026482
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| |||||||||||||||||    
T  8026397 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 8026482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 33494511 - 33494632
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| |||||| | ||| ||| |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  ||||    
T  33494511 agagtcccacatcggataggagatggcttgaaaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 33494610  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||  ||||||| |||||||||    
T  33494611 caccatttctaagatggtatca 33494632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 2736507 - 2736445
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| ||||| ||||| |||||||    
T  2736507 cacatcggatatgagatgacctgataatgtgtttataagtgggggcaattctcacatcacaag 2736445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 2737275 - 2737213
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| ||||| ||||| |||||||    
T  2737275 cacatcggatatgagatgacctgataatgtgtttataagtgggggcaattctcacatcacaag 2737213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 17147772 - 17147702
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| || ||||| ||| ||||| |||||||||||| ||||||||||||||||||||    
T  17147772 agagtcccacatcggataggacatgacctgacaatgtatttataagtgggggcaatcctcacctcacaagc 17147702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 27653225 - 27653310
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| | |||||||||||||||||     ||||||| ||||||||| |  |||||||| |||||||||||||||||    
T  27653225 tgtttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatatggtatca 27653310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 4868657 - 4868619
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  4868657 aatgtgtttataagtgggggcaatcctcacctcacaagc 4868619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 6237814 - 6237744
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||||||||||| || | | ||| ||||| |||||||||| | ||||||||||||||||||||    
T  6237814 agagtcccacattggataagtgaaggcctgacaatgtatttataagtgagggcaatcctcacctcacaagc 6237744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 9705258 - 9705296
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  9705258 aatgtgtttataagtgggggcaatcctcacctcacaagc 9705296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 30849514 - 30849444
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| ||||||| |||  |||||| ||||||||||| ||||||||||| || |||||    
T  30849514 agagtctcacatcggatatgagatgatatggcaatgtgcttataagtgggagcaatcctcacatcgcaagc 30849444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 2736279 - 2736214
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctca 207  Q
    |||||| ||||| || || |||||||| ||| ||||||||||||||||||  ||||||||||||||    
T  2736279 agagtcccacatcgggtaggagatgacctgacaatgtgtttataagtggggacaatcctcacctca 2736214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 8001626 - 8001504
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctctaag 273  Q
    |||||||||||||| |||||| |||||||| |||     ||||| |  |||||||| |  |||||||  ||||||| ||||||||| ||||||||  |||    
T  8001626 tgtttataagtgggggcaatcttcacctcataagtcgattttgttgggttgtgttaggcccaaccacaatttctaagatggtatcagagtctccttaaag 8001527  T
Q  274 atccgttggaccacatgctatca 296  Q
    ||||||||| |||| ||||||||    
T  8001526 atccgttgggccacctgctatca 8001504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 13353205 - 13353330
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||| ||||||    |||||||  |||||||| |  |||||||  ||||||| ||||||||| || || |||    
T  13353205 aatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcct-ctc 13353303  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||| || |||||    
T  13353304 caagatccattgggccacctgttatca 13353330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 16722918 - 16722849
Alignment:
Q  143 gagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| ||||| ||||| | |||| | ||||||| |||||||||||||| ||||| ||||||||||||||    
T  16722918 gagtcccacatcggatatgtgatggcctgataatctgtttataagtgggagcaattctcacctcacaagc 16722849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 19639218 - 19639157
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||| |||||||| ||| | ||| ||||||||||||||||||  |||||||||||||||||    
T  19639218 cacataggataagatatggcctgacaatgtgtttataagtggggacaatcctcacctcacaa 19639157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 33796330 - 33796455
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||| ||||||    |||||||  |||||||| |  |||||||  ||||||| ||||||||| || || |||    
T  33796330 aatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcct-ctc 33796428  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||| || |||||    
T  33796429 caagatccattgggccacctgttatca 33796455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 5572701 - 5572607
Alignment:
Q  168 catgataatgtgtttataagtgggtgcaatcctcacctcacaagc---tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    ||||| ||| |||||||||||||| || |||||||||||||||||   |||||||  || ||||  |  |||||||| |||||||||||||||||    
T  5572701 catgacaatttgtttataagtgggggccatcctcacctcacaagccggtttgtggggttttgttcggcccaaccacgatttctaatatggtatca 5572607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 27772954 - 27773011
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaag 231  Q
    |||||||||||||| ||||||||||||||||||||    ||||||| |||||||||||    
T  27772954 tgtttataagtgggggcaatcctcacctcacaagctggttttgtgggattgtgttaag 27773011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 6543048 - 6542985
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| ||||||||||||   ||| |||||||||||||||||| |||||| |||||||| ||||    
T  6543048 cacatcggataagagatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagc 6542985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 19712722 - 19712756
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  19712722 tgtttataagtgggggcaatcctcacctcacaagc 19712756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 28868069 - 28867999
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| || || ||| |||| ||| ||| | |||||||||||| ||||||||||||||||||||    
T  28868069 agagtcccacatcggttacgagttgacctgacaatttatttataagtgggggcaatcctcacctcacaagc 28867999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 2753262 - 2753299
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||||||||| | |||||||||||||||||    
T  2753262 aatgtgtttataagtgggggtaatcctcacctcacaag 2753299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 3680250 - 3680287
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  3680250 aatgtgtttataagtgggggcaatcatcacctcacaag 3680287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 6400732 - 6400663
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||| ||| | || ||| | ||| |||||||||||||||||  ||||||||||| |||||||    
T  6400732 agagtctcacatcggacatgacatggcctgacaatgtgtttataagtggaggcaatcctcacatcacaag 6400663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 10145858 - 10145793
Alignment:
Q  146 tctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||||  |||||||| ||||||||||||||||| | ||  ||||  ||||||||||||    
T  10145858 tctcacattggatgggagatgacctgataatgtgtttataaatagggacaattttcacctcacaag 10145793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 11085787 - 11085852
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcaca 209  Q
    |||||||||| ||||| |||||||| ||  ||| | |||||||||||| ||||| |||||||||||    
T  11085787 agtctcacatcggataggagatgacctgccaatatatttataagtgggagcaatgctcacctcaca 11085852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 12199917 - 12199848
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||| ||||| |||||||| |||   ||| ||| |||||||||||||| |||||| ||||||||||||    
T  12199917 agagtcccacatcggataagatatggtctgacaatatgtttataagtgggggcaatcatcacctcacaag 12199848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 15103041 - 15102976
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcaca 209  Q
    |||||||||| ||||| | |||||| ||| |||||||||||||| ||| ||||| ||||| |||||    
T  15103041 agtctcacatcggataggtgatgacctgacaatgtgtttataagcgggggcaattctcacttcaca 15102976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 15600936 - 15600977
Alignment:
Q  170 tgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    ||||||| |||||||||||||| ||||||||||| |||||||    
T  15600936 tgataatttgtttataagtgggggcaatcctcacttcacaag 15600977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 24554089 - 24554245
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| ||||||   ||| ||| | |||||||||||| |||||| |||||||||||||    |||||||| ||||||||   |||||    
T  24554089 agagtcccacatcggataggagatggtctgacaatatatttataagtgggggcaatcttcacctcacaagccggttttgtggagttgtgttagtctcaac 24554188  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    ||   ||||||| ||||||||| ||| || || ||||||| |||| |||| ||||||||    
T  24554189 cataatttctaacatggtatcagagtgtcttc-aagatccattgg-ccacctgctatca 24554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 24837166 - 24837117
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtggg 191  Q
    |||||| |||||||||||| ||||| ||||| |||| |||||||||||||    
T  24837166 agagtcccacattggataatagatggcatgaaaatgagtttataagtggg 24837117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 6054383 - 6054443
Alignment:
Q  150 acattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||| ||||||||||||   ||| || || |||||||||||| ||||||||||||||||||    
T  6054383 acatcggataagagatggtctgacaaggtatttataagtgggggcaatcctcacctcacaa 6054443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 136
Target Start/End: Original strand, 25096427 - 25096455
Alignment:
Q  108 ccactaataatttgagaaaatcacataat 136  Q
    |||||||||||||||||||||||||||||    
T  25096427 ccactaataatttgagaaaatcacataat 25096455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 31961182 - 31961218
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||||||||| |||||||| |||||||||    
T  31961182 aatgtgtttataagtgggggcaatccttacctcacaa 31961218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 33631895 - 33631851
Alignment:
Q  163 gatgacatgataatgtgtttataagtgggtgcaatcctcacctca 207  Q
    |||||| ||| ||||||||||||||||||  ||||||||||||||    
T  33631895 gatgacctgacaatgtgtttataagtgggaacaatcctcacctca 33631851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 25620130 - 25620265
Alignment:
Q  164 atgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||| |||||||||    
T  25620130 atgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 25620229  T
Q  260 tagtctcctctaagatccgttggaccacatgctatca 296  Q
     || || ||| ||||||| |||| |||| ||||||||    
T  25620230 gagcct-ctccaagatccattgggccacctgctatca 25620265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 20305775 - 20305631
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||||||||| ||||||     |||||||||||||||||||| |||||||||||||||||| |    |||||||  |||||||| |   |||    
T  20305775 agagtcccacattggataggagatgttccaataatgtgtttataagtgggggcaatcctcacctcacaaacttattttgtggggttgtgttaggcctaac 20305676  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttgg 282  Q
    || | ||||||||||| |||||||| |||||| | ||||||||||    
T  20305675 catgatttctaatatgctatcatagcctcctccatgatccgttgg 20305631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 43085650 - 43085538
Alignment:
Q  142 agagtctcacattgga-taagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaa 236  Q
    |||||||||||| ||| | | ||||||||||| || ||||||||||||||| ||||||||||||||||||    | |||||||  |||||||||| ||||    
T  43085650 agagtctcacatcggaatgaaagatgacatgacaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgttaagctcaa 43085551  T
Q  237 ccacggtttctaa 249  Q
    ||||| |||||||    
T  43085550 ccacgatttctaa 43085538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 26239996 - 26239870
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||||||||    |  ||||||  ||||||||    |||||||  ||||||| ||||||||| || ||||||    
T  26239996 aatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagatggtatcagagcctcctc 26239897  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     |||||||||||| |||| ||||||||    
T  26239896 caagatccgttgggccacctgctatca 26239870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 29469609 - 29469734
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||| ||||||    |||||||  |||||||| |  |||||||| ||||||||||||||||| || || |||    
T  29469609 aatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcct-ctc 29469707  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||| || |||||    
T  29469708 caagatccattgggccacctgttatca 29469734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 36277338 - 36277269
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||| ||| |||| ||| | ||| |||||||||||||||||| |||||||||||||||||||    
T  36277338 agagtctcacatcggacaagacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaag 36277269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 18826600 - 18826499
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||||||||| |||||||| ||| |||||||||||||||||| | ||| |||| |||||||||    |||||||  |||||||| |||||||    
T  18826600 agagtcccacattggataggagatgacctgacaatgtgtttataagtgggggtaattctcaactcacaagctgattttgtggggttgtgttaggttcaac 18826501  T
Q  238 ca 239  Q
    ||    
T  18826500 ca 18826499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 26562185 - 26562057
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| || || ||| || | ||| ||| |||||||||||||| |||||| |||||||||||||    |||||||  || ||||| | |||||    
T  26562185 agagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttatgttaggctcaac 26562086  T
Q  238 cacggtttctaatatggtatcatagtctc 266  Q
    |||  ||||||||||||||||| ||||||    
T  26562085 caccatttctaatatggtatcagagtctc 26562057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 287
Target Start/End: Complemental strand, 40899001 - 40898885
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctct 270  Q
    ||||||||||||||||| |||||| |||||||||||||    ||| ||| ||||||||| | |||| ||||  |||||| || |||||  ||||||||      
T  40899001 atgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaagattgtatccgagtctccttc 40898902  T
Q  271 aagatccgttggaccac 287  Q
    |||||||||||||||||    
T  40898901 aagatccgttggaccac 40898885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 43075423 - 43075311
Alignment:
Q  142 agagtctcacattgga-taagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaa 236  Q
    |||||||||||| ||| | | ||||||||||| || ||||||||||||||| ||||||||||||||||||    | |||||||  ||||||| || ||||    
T  43075423 agagtctcacatcggaatgaaagatgacatgacaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgttgagctcaa 43075324  T
Q  237 ccacggtttctaa 249  Q
    ||||| |||||||    
T  43075323 ccacgatttctaa 43075311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 44342998 - 44342885
Alignment:
Q  184 taagtgggtgcaatcctcacctcacaagc---tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctctaagatccgtt 280  Q
    ||||| || ||||||||||||||||||||   ||||||   |||||||||| ||||||||  ||| ||| ||||||||| ||||||||| |||||| |||    
T  44342998 taagttggagcaatcctcacctcacaagccagtttgtgtggttgtgttaagatcaaccacaatttttaagatggtatcaaagtctcctccaagatctgtt 44342899  T
Q  281 ggaccacatgctat 294  Q
    || |||| ||||||    
T  44342898 gggccacctgctat 44342885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 22574808 - 22574877
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| | |||||||||| ||||| |||||||||| | ||||||||||||||||||||    
T  22574808 agagtctcacatcggatatgtgatgacatgacaatgt-tttataagtgagggcaatcctcacctcacaagc 22574877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 34027401 - 34027484
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtat 257  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| |||||||||||||||    
T  34027401 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtat 34027484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 43089321 - 43089251
Alignment:
Q  142 agagtctcacattgga-taagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||| ||| | | ||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  43089321 agagtctcacatcggaatgaaagatgacatgacaacgtgtttataagtgggggcaatcctcacctcacaag 43089251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 47710415 - 47710485
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| | |||| | | | |||||||||||||||||| ||||||||||||||||||||    
T  47710415 agagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcctcacctcacaagc 47710485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 47722071 - 47722141
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| | |||| | | | |||||||||||||||||| ||||||||||||||||||||    
T  47722071 agagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcctcacctcacaagc 47722141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 29469844 - 29469926
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatat 252  Q
    |||||||||||||||||| ||||||||||||| ||||||    |||||||| |||||||| |  |||||||| ||||||||||    
T  29469844 aatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgatttctaatat 29469926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 33996423 - 33996302
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| || ||| | | ||||||| |||||||||||| |||||| |||||||||||    | |||||||| |||||||| |  ||||    
T  33996423 agagtcccacatcggataggacatggcctaataatgtatttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaac 33996324  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||| ||||||| |||||||||    
T  33996323 cacgatttctaagatggtatca 33996302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 35308254 - 35308190
Alignment:
Q  146 tctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||  |||| |||||| ||||| |||||||||||||||||| |||||| |||||||||||    
T  35308254 tctcacatcagataggagatgtcatgacaatgtgtttataagtgggggcaatcatcacctcacaa 35308190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 44874458 - 44874390
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| ||||| ||||| ||||| || ||| |||||||||||||||||| | ||||||||||||||||    
T  44874458 agagtcccacatcggataggagataacctgacaatgtgtttataagtgggggaaatcctcacctcacaa 44874390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 48661667 - 48661546
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| |||||  |||| |||||||| ||| ||||| |||||| ||||| ||||||||||||||||||||    ||||||  |||||||||    ||||    
T  48661667 agagtcccacatcagataggagatgacctgacaatgtatttataggtgggggcaatcctcacctcacaagccggttttgtgagattgtgttagacccaac 48661568  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||| ||||||||||| |||||    
T  48661567 cacgatttctaatatgatatca 48661546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 1793720 - 1793788
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||||||||||   ||| ||  ||||||| |||||| ||||||||||||||||||||    
T  1793720 agagtctcacattggataagagatggtctgacaa--tgtttattagtgggggcaatcctcacctcacaagc 1793788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 28080637 - 28080683
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagt 188  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||    
T  28080637 agagtctcacatcggataagagatgacctgacaatgtgtttataagt 28080683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 48243141 - 48243103
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  48243141 aatgtgtttataagtgggggcaatcctcacctcacaagc 48243103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 6001547 - 6001482
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctca 207  Q
    |||||| ||||| |||||  ||||||| ||| ||| |||||||||||||| |||||||||||||||    
T  6001547 agagtcccacatcggatagaagatgacctgacaatatgtttataagtgggggcaatcctcacctca 6001482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 15317532 - 15317592
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||| ||||| | ||| | |||||||||||||||| ||||||||||||||||||    
T  15317532 cacattggataaaagatggcctgaca-tgtgtttataagtgggggcaatcctcacctcacaa 15317592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 21861298 - 21861423
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||| | ||||||||||||| ||||||    ||||||| ||||||||| |  |||||||  ||||||| ||||||||| || || |||    
T  21861298 aatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagatggtatcagagcct-ctc 21861396  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||| || |||||    
T  21861397 caagatccattgggccacctgttatca 21861423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 42985235 - 42985166
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||| ||||| | ||||   ||| |||||||||||||||||  |||||||||||||||||||    
T  42985235 agagtctcacatcggatatgtgatggtttgacaatgtgtttataagtggaggcaatcctcacctcacaag 42985166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 47849550 - 47849611
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||| |||||| ||||| |||||  |||||||||||||| || ||||||||||||||||||    
T  47849550 cacatcggataaaagatggcatgaacatgtgtttataagttggggcaatcctcacctcacaa 47849611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 2544523 - 2544438
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| |||||||||||||||||||     |||||||  |||||||| |  |||||||| ||| |||||||||||||    
T  2544523 tgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatca 2544438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 4454780 - 4454816
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||||||||| ||||||||||||||||||    
T  4454780 aatgtgtttataagtgggggcaatcctcacctcacaa 4454816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 10882091 - 10882047
Alignment:
Q  168 catgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||    
T  10882091 catgacaatttgtttataagtgggggcaatcctcacctcacaagc 10882047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 17202151 - 17202272
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| || |||||| || | ||| ||| |||||||||||||| ||||| |||| |||||||||    |||||||  |||||||| |  ||||    
T  17202151 agagtcccacatcggttaagagttggcctgacaatttgtttataagtgggggcaattctcatctcacaagccggttttgtggggttgtgttaggcccaac 17202250  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||| ||| |||||||||||||    
T  17202251 cacgatttttaatatggtatca 17202272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 30727195 - 30727159
Alignment:
Q  177 gtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30727195 gtgtttataagtgggggcaatcctcacctcacaagct 30727159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 43688271 - 43688161
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc---tttgtggaattgtgttaagttcaacc 238  Q
    |||||| ||||| ||||| || ||| | ||| |||||||||||||||||| |||||||| ||||| |||||   |||||||  |||||||| |  |||||    
T  43688271 agagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatccttacctctcaagccggtttgtggggttgtgttaggcccaacc 43688172  T
Q  239 acggtttctaa 249  Q
    ||| |||||||    
T  43688171 acgatttctaa 43688161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 1596598 - 1596722
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc---tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctct 270  Q
    |||||||| ||||||||| ||||||||||||| ||||||   |||||||  |||||||| |   ||||||  ||||||| ||||||||| || || |||     
T  1596598 aatgtgttaataagtgggggcaatcctcaccttacaagccggtttgtggggttgtgttaggcctaaccacaatttctaagatggtatcagagcct-ctcc 1596696  T
Q  271 aagatccgttggaccacatgctatca 296  Q
    ||||||| |||| ||||||| |||||    
T  1596697 aagatccattgggccacatgttatca 1596722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 6634827 - 6634898
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||||||||| || || ||| || | ||| ||| |||||||||||||| ||||||||||||||| |||||    
T  6634827 agagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcataagct 6634898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 14540846 - 14540742
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtt 244  Q
    ||||| ||||| |||||||| ||| |||||||||||||||  |  |||||||| | ||||||||    ||| ||||||||||||| ||| ||||||| ||    
T  14540846 cacatcggataggagatgacctgacaatgtgtttataagtaaggacaatcctctcatcacaagccaattttttggaattgtgttaggtttaaccacgatt 14540747  T
Q  245 tctaa 249  Q
    |||||    
T  14540746 tctaa 14540742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 32879711 - 32879656
Alignment:
Q  158 taagagatgacatgataatgtgtttataagt-gggtgcaatcctcacctcacaagc 212  Q
    ||||||||| | ||| ||||||||||||||| ||| ||||||||||||||||||||    
T  32879711 taagagatggcctgacaatgtgtttataagtggggggcaatcctcacctcacaagc 32879656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 47849764 - 47849832
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| |||||| |||||||||||  | |||||||||||| || ||||| ||||||||||||||    
T  47849764 agagtcccacatcggataaaagatgacatga--acgtgtttataagttggggcaatactcacctcacaagc 47849832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 423
Target Start/End: Complemental strand, 3038109 - 3038079
Alignment:
Q  393 tgttaggcccaaccatgatttctaagataat 423  Q
    |||||||||||||||||||||||||||||||    
T  3038109 tgttaggcccaaccatgatttctaagataat 3038079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 3038164 - 3038126
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  3038164 aatgtgtttataagtgggggcaatcctcacgtcacaagc 3038126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 3392954 - 3393024
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| | |||| | ||| ||||||||||||||||||   ||| ||||||||||||||    
T  3392954 agagtctcacatcggataggtgatggcctgacaatgtgtttataagtggggaaaattctcacctcacaagc 3393024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 3520120 - 3520082
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  3520120 aatgtgtttataagtgggggcaatcctcacctcgcaagc 3520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 8075826 - 8075900
Alignment:
Q  142 agagtctcacattggataaga-----gatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||||||||| ||     |||| ||||||||||||||||||||||||   |||| ||||||||||||    
T  8075826 agagtctcacattggataggatagaagatggcatgataatgtgtttataagtggggataatcttcacctcacaag 8075900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 11211790 - 11211721
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||| | |||||||||||| | | | ||||| |||||||||||| ||||||||||||||||||||    
T  11211790 agagtcccacgtcggataagagatggcctaacaatgtctttataagtggg-gcaatcctcacctcacaagc 11211721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 21055029 - 21054995
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  21055029 tgtttataagtgggggcaatcctcacctcacaagc 21054995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 21473147 - 21473109
Alignment:
Q  172 ataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  21473147 ataaagtgtttataagtgggagcaatcctcacctcacaa 21473109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 21861533 - 21861571
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  21861533 aatgtgtttataagtgggggcaatcctcaccttacaagc 21861571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 22574577 - 22574647
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| | |||| | ||||||| |||||||||||| | ||||| ||||||||||||||    
T  22574577 agagtcccacatcggatatgtgatggcttgataatctgtttataagtgagagcaattctcacctcacaagc 22574647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 23839189 - 23839119
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||  ||||||||||||   | | ||| |||||||||||||| | ||||||||||||||||||    
T  23839189 agagtctcacaacggataagagatggtctaacaatctgtttataagtgggggaaatcctcacctcacaagc 23839119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 31892359 - 31892429
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||   | ||||||||| ||||| ||||||||||||  ||||| |||||||||||||    
T  31892359 agagtctcacatcggatggaacatgacatgacaatgtatttataagtggggacaatcttcacctcacaagc 31892429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 48243549 - 48243479
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||||| ||| | |||| | ||| |||||||||||||||||| |||||||||| || ||||||    
T  48243549 agagtcccacattgaatatgtgatggcctgacaatgtgtttataagtgggggcaatcctcatcttacaagc 48243479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 31485758 - 31485701
Alignment:
Q  155 ggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||| |||| | ||| ||||| |||||||||||| ||||||||||||| ||||||    
T  31485758 ggataagtgatggcctgacaatgtttttataagtgggggcaatcctcacctgacaagc 31485701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 422
Target Start/End: Complemental strand, 36993099 - 36993070
Alignment:
Q  393 tgttaggcccaaccatgatttctaagataa 422  Q
    ||||||||||||||||||||||||||||||    
T  36993099 tgttaggcccaaccatgatttctaagataa 36993070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 40898812 - 40898759
Alignment:
Q  157 ataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||| ||||||||| |  ||||||||||||||||| ||||||||||||| ||||    
T  40898812 ataaaagatgacataaatatgtgtttataagtgggggcaatcctcaccttacaa 40898759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 23796264 - 23796228
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||||||||| |||||| |||||||||||    
T  23796264 aatgtgtttataagtgggggcaatcatcacctcacaa 23796228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 31485504 - 31485468
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  31485504 aatgtgtttataagtgggggcaatcctcacatcacaa 31485468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 31892149 - 31892193
Alignment:
Q  168 catgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| ||||| ||||||||||||  |||||||||||||||||||    
T  31892149 catgacaatgtatttataagtggggacaatcctcacctcacaagc 31892193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 40792907 - 40792839
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||   ||||  ||||| |||||||||||||||||  | | ||||||||||||||||    
T  40792907 agtctcacattggatcgaagatatcatgacaatgtgtttataagtggcggtagtcctcacctcacaagc 40792839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 296
Target Start/End: Original strand, 20301240 - 20301390
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtt 244  Q
    ||||||||||| |||||| | ||| |||||||||||||||||| |||||||| |||||||||||    ||||||   |||||||| |  |||||||| ||    
T  20301240 cacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatt 20301339  T
Q  245 tctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    ||||| ||||||||| || ||| || ||||||| |||| |||| ||||||||    
T  20301340 tctaagatggtatcagagcctcttc-aagatccattgggccacctgctatca 20301390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 296
Target Start/End: Original strand, 21087872 - 21088022
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtt 244  Q
    ||||||||||| |||||| | ||| |||||||||||||||||| |||||||| |||||||||||    ||||||   |||||||| |  |||||||| ||    
T  21087872 cacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatt 21087971  T
Q  245 tctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    ||||| ||||||||| || ||| || ||||||| |||| |||| ||||||||    
T  21087972 tctaagatggtatcagagcctcttc-aagatccattgggccacctgctatca 21088022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 17469826 - 17469911
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| | ||||||||| |||||||||||||||||    
T  17469826 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatca 17469911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 12688279 - 12688349
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| |||||||||||  ||||||| ||| |||||||||||||||||| |||||||| |||||||||||    
T  12688279 agagtcccacattggatagaagatgacctgacaatgtgtttataagtgggggcaatccttacctcacaagc 12688349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 8084131 - 8084256
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    ||||| |||||||||||| ||||||||||||||||||||    |||| ||| ||||||||    |||||||| ||||||| ||||||||| || || |||    
T  8084131 aatgtatttataagtgggggcaatcctcacctcacaagctggttttgcggagttgtgttagacccaaccacgatttctaagatggtatcagagcct-ctc 8084229  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||||||||||||    
T  8084230 caagatccattgggccacatgctatca 8084256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 296
Target Start/End: Complemental strand, 24532533 - 24532376
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| |||||| | ||| |||||||||||||||||| |||||| |||||||||||||    |||||||  |||||||| |  ||||    
T  24532533 agagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaac 24532434  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    || | ||||||| ||||||||| || | |||  ||||||| |||| |||| ||||||||    
T  24532433 catgatttctaagatggtatcagag-ccccttcaagatccattgggccacctgctatca 24532376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 38447526 - 38447469
Alignment:
Q  155 ggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||    
T  38447526 ggataagagatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagc 38447469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 4828040 - 4828161
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| || || ||| |||||||| ||| ||||||||||||||  |||||||||||||||||||    |||||||  |||||||| |  ||||    
T  4828040 agagtcccacatcggttaggagttgacatgacaatttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 4828139  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||| | |||||||||||||||    
T  4828140 cacgatctctaatatggtatca 4828161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 12317050 - 12317139
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||||||| ||||||||||||||| ||||    ||||||| ||||||||| |  |||||||| ||||||| |||||||||    
T  12317050 aatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatca 12317139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 19256896 - 19256811
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| |||||||||||||||||    
T  19256896 tgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 19256811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 8466836 - 8466765
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||||||||| |||||||||||| |||||    |||||||||||||||  ||||||||||||||||||||    
T  8466836 agagtctcacatcggataagagatggcatgaacgagtgtttataagtggggacaatcctcacctcacaagct 8466765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 22638291 - 22638180
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| |||||||||||| | ||  || |||||||||||| || |||||||||||| |||||||    |||||||  ||||||||||  ||||    
T  22638291 agagtctcacatcggataagagatggcctgtcaaagtgtttataagtaggggcaatcctcaccacacaagccggttttgtggggttgtgttaagcccaac 22638192  T
Q  238 cacggtttctaa 249  Q
    |||| |||||||    
T  22638191 cacgatttctaa 22638180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 39053041 - 39052971
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| | |||| | ||| |||||||||||||||||| ||||||||||||||||||||    
T  39053041 agagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagc 39052971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 28213183 - 28213058
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||| | ||||||||||||||||||||    || | ||  |||||||| |  |||||||| ||||||||||||||||| |  ||||||    
T  28213183 aatgtgtttataagtgcg-gcaatcctcacctcacaagccaatttggcggggttgtgttaggcccaaccacgatttctaatatggtatcagatcctcctc 28213085  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     |||||| ||||| |||| ||||||||    
T  28213084 caagatctgttgggccacctgctatca 28213058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 34236753 - 34236692
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||| ||||||||||||   ||| |||||||||||||||||| ||||||||||||||||||    
T  34236753 cacatcggataagagatggtctgacaatgtgtttataagtgggagcaatcctcacctcacaa 34236692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 17477073 - 17477150
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaata 251  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| | ||||||||| |||||||||    
T  17477073 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaata 17477150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 20301487 - 20301543
Alignment:
Q  156 gataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||| |||||| ||||| |||||||||||||||||| |||||||||||| |||||||    
T  20301487 gatatgagatggcatgacaatgtgtttataagtgggggcaatcctcaccccacaagc 20301543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 21088119 - 21088175
Alignment:
Q  156 gataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||| |||||| ||||| |||||||||||||||||| |||||||||||| |||||||    
T  21088119 gatatgagatggcatgacaatgtgtttataagtgggggcaatcctcaccccacaagc 21088175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 37868662 - 37868538
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctct 270  Q
    |||||||||| | |||| ||||||||||||||||||||    ||||||||||||||||| |   ||||||| ||| ||| |||||||||||| || |||     
T  37868662 atgtgtttattaatgggggcaatcctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgatttttaagatggtatcatagcct-ctcc 37868564  T
Q  271 aagatccgttggaccacatgctatca 296  Q
    ||||||| |||| ||||  |||||||    
T  37868563 aagatccattgggccacccgctatca 37868538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 41790652 - 41790787
Alignment:
Q  163 gatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatc 258  Q
    |||||| ||| ||||||||||||||||||  |||||||||||||| ||||    |||||||  |||||||| |  |||||||| ||||||| ||||||||    
T  41790652 gatgacctgacaatgtgtttataagtggggacaatcctcacctcataagccggttttgtgg-gttgtgttaggcccaaccacgatttctaagatggtatc 41790750  T
Q  259 atagtctcctctaagatccgttggaccacatgctatca 296  Q
    | || ||| || ||||||| |||| |||| ||||||||    
T  41790751 agagcctcttc-aagatccattgggccacctgctatca 41790787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 4873795 - 4873733
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| |||||||||||||| ||| |||||||||||||||| | ||||| ||||||||||||||    
T  4873795 cacatcggataagagatgacctgacaatgtgtttataagtgtg-gcaattctcacctcacaagc 4873733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 4828265 - 4828335
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| || || ||| || ||||| ||| |||||||||||||| ||||||||||||||||||||    
T  4828265 agagtcccacatcggttaggagttggcatgacaatttgtttataagtgggggcaatcctcacctcacaagc 4828335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 5932029 - 5931991
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  5932029 aatgtgtttataagtgggggcaatcctcacctcacaagc 5931991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 297
Target Start/End: Complemental strand, 5932264 - 5932138
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| |||| |||||||||||||||    |||||||  |||||||| |  |||||||  ||| ||| ||||||||| || || |||    
T  5932264 aatgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaagatggtatcagagcct-ctc 5932166  T
Q  270 taagatccgttggaccacatgctatcac 297  Q
     ||||||| ||||||||| | |||||||    
T  5932165 caagatccattggaccacctactatcac 5932138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 7729913 - 7729983
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| |||||  |||| |||||| | |||  ||||||||||||||||| ||||||||||||||||||||    
T  7729913 agagtcccacatcagatatgagatggcctgaccatgtgtttataagtgggggcaatcctcacctcacaagc 7729983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 10449972 - 10450042
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| || ||| | ||| |||||||||||||||| | ||||||||||||||| ||||    
T  10449972 agagtctcacatcggataggacatggcctgacaatgtgtttataagtgtgggcaatcctcacctcagaagc 10450042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 25325650 - 25325688
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  25325650 aatgtgtttataagtgggtgcaatcctctcctcacaagc 25325688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 28069469 - 28069358
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| || ||| | ||| ||||| |||||||||||| |||||||||||||||||| |    |||||||| ||||||||  | ||||    
T  28069469 agagtcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaaactgattttgtggagttgtgttagatccaac 28069370  T
Q  238 cacggtttctaa 249  Q
    |||| |||||||    
T  28069369 cacgatttctaa 28069358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 29005840 - 29005906
Alignment:
Q  146 tctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| |||||||| ||| ||| ||||||||||||||  |||||||||| ||| ||||    
T  29005840 tctcacattggataggagatgacctgacaatatgtttataagtgggaacaatcctcacttcataagc 29005906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 29006063 - 29006125
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacc 204  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||| || | | ||||||||||    
T  29006063 agagtctcacattagatatgagatgacatgacaatgtgtttataaatgagggaaatcctcacc 29006125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 7669645 - 7669682
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||||||||| |||||||||||||||||||    
T  7669645 aatgtgtttataagtgggggcaatcctcacctcacaag 7669682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 296
Target Start/End: Complemental strand, 10615051 - 10614894
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| |||||| | |||||||||  ||||||||| || |||| | |||| |||||||||||||    |||||||  |||| ||| | |||||    
T  10615051 agagtcccacatcggataaaatatgacatgaacatgtgtttacaaatgggggtaatcttcacctcacaagccgattttgtggggttgtattaggctcaac 10614952  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||| ||| ||| ||| |||||||| || ||| ||||||| ||||||||| ||| ||||    
T  10614951 cacgatttataagatgatatcatagcct-ctccaagatccattggaccacctgcaatca 10614894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 11232509 - 11232384
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||| ||||||    |||||||  |||||||| |  |||||||  ||||||| ||||||||| || || |||    
T  11232509 aatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcct-ctc 11232411  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||| || |||||    
T  11232410 caagatccattgggccacctgttatca 11232384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 24075382 - 24075304
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatat 252  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||||||    
T  24075382 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 24075304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 29907838 - 29907769
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||| ||||| |||||||||||    ||| ||||||||||||||||||  ||||||||||||||||||    
T  29907838 agagtcccacatcggataagagatagtctgacaatgtgtttataagtggggtcaatcctcacctcacaag 29907769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 37001233 - 37001319
Alignment:
Q  177 gtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    ||||||||| ||||| ||||||||||||||||||||    |||||||| |||||||| |  |||||||| |||| || |||||||||    
T  37001233 gtgtttataggtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatca 37001319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 6462931 - 6462979
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgg 190  Q
    ||||| |||||| |||||||||||||| ||| |||||||||||||||||    
T  6462931 agagtttcacatcggataagagatgacttgacaatgtgtttataagtgg 6462979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 11232274 - 11232185
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||||||| ||||||||||||| ||||||    |||||||  |||||||| |  |||||||  ||||||| |||||||||    
T  11232274 aatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 11232185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 19256662 - 19256585
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaata 251  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| |||||||||    
T  19256662 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 19256585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 7658453 - 7658496
Alignment:
Q  94 tcgatacgccgatgccactaataatttgagaaaatcacataatt 137  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||    
T  7658453 tcgatacgccgacaccactaataatttgagaaaattacataatt 7658496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 18939373 - 18939338
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||||||||||| |||||||||||||||||||||    
T  18939373 tgtttataagtgggggcaatcctcacctcacaagct 18939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 38475754 - 38475789
Alignment:
Q  177 gtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||||| ||||||||||||||||||||    
T  38475754 gtgtttataagtgggggcaatcctcacctcacaagc 38475789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 39960163 - 39960234
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagt-gggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| |||||| | ||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  39960163 agagtcccacatcggataggagatggcctgaaaatttgtttataagtggggggcaatcctcacctcacaagc 39960234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 5590480 - 5590410
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| ||||||   ||| |||||||||| ||||||| ||||||||||| ||||||||    
T  5590480 agagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagc 5590410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 5940030 - 5940100
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| |||| |||||||   ||| ||||||||||||| ||||  |||||||||||||||||||    
T  5940030 agagtcccacatcggatgagagatggtttgacaatgtgtttataaatggggacaatcctcacctcacaagc 5940100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 8928997 - 8929059
Alignment:
Q  150 acattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||| ||||| |||||| | ||| ||||||||||||| |||| ||||||| ||||||||||||    
T  8928997 acatcggatatgagatggcctgacaatgtgtttataactgggggcaatccgcacctcacaagc 8929059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 12688072 - 12688114
Alignment:
Q  170 tgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||||| | ||||||| ||||||||||||    
T  12688072 tgataatgtgtttataagtgagggcaatccccacctcacaagc 12688114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 15042782 - 15042671
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| ||||| || ||| | ||| |||||||||||||||||| |||||| ||||||| ||| |    |||||||  |||||||| | |||||    
T  15042782 agagtcccacatcggatacgacatggcctgacaatgtgtttataagtgggggcaatcatcacctcgcaaaccgattttgtggggttgtgttaggctcaac 15042683  T
Q  238 cacggtttctaa 249  Q
    |||| |||||||    
T  15042682 cacgatttctaa 15042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 26208277 - 26208203
Alignment:
Q  222 ttgtgttaagttcaaccacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||||||| || || ||||  ||||||| ||||||||| || || |||||||||||||||| |||| ||||||||    
T  26208277 ttgtgttaggtccatccacaatttctaagatggtatcagagccttctctaagatccgttgggccacctgctatca 26208203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 30201636 - 30201566
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| |||||||||||| ||||  |||  |||||||||||||  ||||| |||||||||||||    
T  30201636 agagtcccacatcggataagagatggcatggcaataagtttataagtggggtcaatcttcacctcacaagc 30201566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 31079911 - 31079841
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||||||| || | ||| |||||| || |||||||||||| | ||||||||||||||| ||||    
T  31079911 agagtcccacattggacaaaatatggcatgatcatatgtttataagtgagagcaatcctcacctcaaaagc 31079841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 34843125 - 34843159
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  34843125 tgtttataagtgggagcaatcctcacctcacaagc 34843159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 35682861 - 35682823
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  35682861 aatgtgtttataagtgggggcaatcctcacctcgcaagc 35682823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 39984822 - 39984856
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  39984822 tgtttataagtgggggcaatcctcacctcacaagc 39984856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 45031473 - 45031403
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| | |||||||| |||||||| ||||  || ||||||||||| || ||||||||||||| ||||||    
T  45031473 agagtcccccattggatgagagatgatatgaacatatgtttataagtcggggcaatcctcaccttacaagc 45031403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 31079641 - 31079604
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  31079641 atgtgtttataagtggaggcaatcctcacctcacaagc 31079604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 42049766 - 42049729
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  42049766 atgtgtttataagtgggggcaatcctcaccccacaagc 42049729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 422327 - 422259
Alignment:
Q  144 agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||| ||||| ||||| ||||||   ||| |||||||||| ||||||  ||||||||||||||||||||    
T  422327 agtcccacatcggataggagatggtctgacaatgtgtttaaaagtggaggcaatcctcacctcacaagc 422259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 3157407 - 3157367
Alignment:
Q  174 aatgtgtttataagtgggtg-caatcctcacctcacaagct 213  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  3157407 aatgtgtttataagtggggggcaatcctcacctcacaagct 3157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 3961511 - 3961443
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| |||||  ||||||||||||  ||| ||||||||||||| |||| |||||  |||||||||||    
T  3961511 agagtcccacatcagataagagatgagctgacaatgtgtttataaatgggagcaattatcacctcacaa 3961443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 27439640 - 27439516
Alignment:
Q  161 gagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct----ttgtggaattgtgttaagttcaaccacggtttctaatatggta 256  Q
    |||||| | ||| ||||||||||||||| ||  |||||||| |||||||||||    ||||||  |||||| | | ||||| |||  || ||| ||||||    
T  27439640 gagatggcctgacaatgtgtttataagtagggtcaatcctcgcctcacaagctggttttgtggcgttgtgtcaggctcaactacgagttttaagatggta 27439541  T
Q  257 tcatagtctcctctaagatccgttgg 282  Q
    ||| |||||| |||||||||||||||    
T  27439540 tcagagtctc-tctaagatccgttgg 27439516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 30966157 - 30966109
Alignment:
Q  164 atgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||  |||||||||||||||||| ||| ||||||||| ||||||    
T  30966157 atgacatgtcaatgtgtttataagtgggggcagtcctcaccttacaagc 30966109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 39052617 - 39052581
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  39052617 aatgtgtttataagtgggggcaatcctcacctaacaa 39052581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 40079120 - 40079194
Alignment:
Q  138 tgttagagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||  |||| ||||| |||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  40079120 tgttagagtcctacatcggataggagatgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagc 40079194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 31181618 - 31181554
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    |||||||||||||||||| | |||  ||||||||||||||||| |||||||||||||||||||||    
T  31181618 cacattggataagagatggcctgaacatgtgtttataagtgggggcaatcctcacctcacaagct 31181554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 42586550 - 42586481
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| |||||||||||| | ||| ||||||| |||||||||| ||||||||||||||||||||    
T  42586550 agagtctcacatcggataagagatggcctgacaatgtgtatataagtggg-gcaatcctcacctcacaagc 42586481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 38733156 - 38733280
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    ||||||||||||||||||  |||| |||| ||||||||     ||||||  ||||||||| ||||||||||| ||||||| ||||||||| ||||| |||    
T  38733156 aatgtgtttataagtggga-caattctcatctcacaagtcggttttgtgagattgtgttaggttcaaccacgatttctaagatggtatcagagtct-ctc 38733253  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| ||||||||| ||||||||    
T  38733254 caagatccattggaccacctgctatca 38733280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 4113086 - 4112998
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatc 258  Q
    |||||||||||||||||| ||||||||||||||||||||    |||||||  |||||||| |  |||||||| ||||||| ||||||||    
T  4113086 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatc 4112998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 52650891 - 52650812
Alignment:
Q  135 atttgttag-agtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    ||||||||| |||| ||||| ||||| |||||| |  || |||||||||||||||||| |||||||||||||||||||||    
T  52650891 atttgttaggagtcccacatcggataggagatggccggacaatgtgtttataagtgggggcaatcctcacctcacaagct 52650812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 25145832 - 25145762
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| | |||||| ||| ||||| ||||| |||||| ||||||||||||||||||||    
T  25145832 agagtctcacatcggataggtgatgacctgacaatgtatttattagtgggggcaatcctcacctcacaagc 25145762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 4098514 - 4098445
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||| ||||| |||||| |||||   |||||||||||||||||||||| ||||||||||||| |||||    
T  4098514 agagtcgcacatcggataatagatggtttgataatgtgtttataagtgggggcaatcctcaccttacaag 4098445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 320
Target Start/End: Complemental strand, 8870990 - 8870841
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    ||||||||||||||| || ||||| ||||||||| ||||    |||||||  |||||||| || |||||||  ||||||| ||||||||| ||||| |||    
T  8870990 aatgtgtttataagttggggcaattctcacctcataagccgtttttgtggggttgtgttaggtccaaccaccatttctaagatggtatcagagtct-ctc 8870892  T
Q  270 taagatccgttggaccacatgctatcacaccacccatcgttcatgtccacg 320  Q
     || |||| |||| |||| ||||||||  ||||||| | || |||||||||    
T  8870891 caatatccattgggccacctgctatcaagccacccaccatttatgtccacg 8870841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 296
Target Start/End: Complemental strand, 32783392 - 32783236
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||||||||| |||||| |||||   |||  ||||||||||||| ||| |||||| ||| |||||||||    ||| ||||||| |||||  | ||||    
T  32783392 agagtctcacatcggataatagatggtttga-catgtgtttataagcgggggcaatcttcatctcacaagctagttttatggaattttgttagatccaac 32783294  T
Q  238 cacggtttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||| ||||||| ||||||||| |||||| || ||||||| ||| ||||| ||||||||    
T  32783293 cacgatttctaagatggtatcagagtctcttc-aagatccattgtaccacctgctatca 32783236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 3169774 - 3169859
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||||| |||||| |||||||||||||    |||||||  |||||||| |  |||||||| |||||||||||||||||    
T  3169774 tgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 3169859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 15986454 - 15986374
Alignment:
Q  134 aatttgtta-gagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    ||||||||| |||||  |||| ||||| |||||  | ||| |||||||||||||||||| |||||||||||||||||||||    
T  15986454 aatttgttaagagtcctacatcggataggagatagcctgacaatgtgtttataagtgggggcaatcctcacctcacaagct 15986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 16163139 - 16163207
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||| ||||| ||||| | |||||| ||| |||||||||||||||||| |||||| |||||||||||    
T  16163139 agagtcccacatcggataggtgatgacttgacaatgtgtttataagtgggggcaatcttcacctcacaa 16163207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 51589814 - 51589899
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||| | ||||||||||||||||||||    |||||||  |||||||| |  |||||||| |||||||||||||||||    
T  51589814 tgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 51589899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 296
Target Start/End: Complemental strand, 39348450 - 39348307
Alignment:
Q  156 gataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa----gctttgtggaattgtgttaagttcaaccacggtttctaata 251  Q
    |||| |||||| | ||| || ||||||||||||||| ||||||||||||||||||    | |||||||  |||||||| |  ||| |||| ||||||| |    
T  39348450 gataggagatggcttgacaacgtgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaa-cacgatttctaaga 39348352  T
Q  252 tggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    |||||||| || |||||| ||| ||| |||| |||| ||||||||    
T  39348351 tggtatcagagcctcctccaaggtccattgggccacctgctatca 39348307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 2859504 - 2859434
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| | |||| | ||| |||||||||||||||||| |||||||| |||||||||||    
T  2859504 agagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatccttacctcacaagc 2859434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 17452940 - 17452870
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| |||||||| ||| | ||| ||||| |||||||||||| |||||| |||||||||||||    
T  17452940 agagtcccacatcggataagacatggcctgacaatgtatttataagtgggggcaatcttcacctcacaagc 17452870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 31004516 - 31004478
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  31004516 atgtgtttataagtgggggcaatcctcacctcacaagct 31004478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 35772236 - 35772306
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||| |||||| | ||| |||||||||||||||||| |||||||| |||||| ||||    
T  35772236 agagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatccttacctcagaagc 35772306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 41035903 - 41035828
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaa 249  Q
    |||||||||||||| ||||||||||||||||||||    ||||||| ||||||||| || |||| ||| |||||||    
T  41035903 tgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaa 41035828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 52907389 - 52907427
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagct 213  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  52907389 atgtgtttataagtgggggcaatcctcacctcacaagct 52907427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 5109465 - 5109525
Alignment:
Q  150 acattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    ||||||||||||||| | | | ||||||||||||||||| |||| |||||||||||||||||    
T  5109465 acattggataagagaggtc-taataatgtgtttataagtcggtgtaatcctcacctcacaag 5109525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 8870769 - 8870732
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8870769 aatgtgtttataagtgggggcaatcctcacctcacaag 8870732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 25145597 - 25145528
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||| ||||| | ||||   ||| ||||||||||| |||||| |||||||||||||||||||    
T  25145597 agagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggcaatcctcacctcacaag 25145528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 52127729 - 52127806
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatat 252  Q
    |||||||||||||| ||||||||||||||||||||    |||||||  |||||||| || |||||||| ||||||||||    
T  52127729 tgtttataagtggg-gcaatcctcacctcacaagctgcttttgtggggttgtgttaggtccaaccacgatttctaatat 52127806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 7465739 - 7465687
Alignment:
Q  160 agagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||| |||||  | ||||||||||||||| ||||||||||||||||||||    
T  7465739 agagatggcatgaataagtgtttataagtgggggcaatcctcacctcacaagc 7465687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 17452777 - 17452721
Alignment:
Q  156 gataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||| ||| | ||| ||||| |||||||||||| ||||||||||||||||||||    
T  17452777 gataagacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaagc 17452721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 38668111 - 38668167
Alignment:
Q  156 gataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| |||| |||||||||||||||||| |||||| ||| |||||||||    
T  38668111 gataagtgatgaaatgacaatgtgtttataagtgggggcaatcatcatctcacaagc 38668167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 51589000 - 51589085
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||| | ||||||||||||||||||||    |||||||  |||||||| |  |||||||  |||||||||||||||||    
T  51589000 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaatatggtatca 51589085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 51589234 - 51589319
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||||||| | ||||||||||||||||||||    |||||||  |||||||| |   ||||||| |||||||||||||||||    
T  51589234 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaatatggtatca 51589319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 26865463 - 26865400
Alignment:
Q  149 cacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||| ||| |||| ||||| ||| ||||| |||||||||||| ||||||| ||||||||||||    
T  26865463 cacatcggacaagacatgacctgacaatgtatttataagtgggggcaatccccacctcacaagc 26865400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 2859739 - 2859669
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||| ||||| | ||||   ||| ||||||||||| |||||| | ||||||||||||||||||    
T  2859739 agagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggtaatcctcacctcacaagc 2859669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 4112652 - 4112582
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||| | || ||| ||||| ||||||||||||||| || |||||| |||||||||||||    
T  4112652 agagtcccacatcggacaggacatggcatgacaatgtgtttataagtaggggcaatcatcacctcacaagc 4112582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 10572653 - 10572615
Alignment:
Q  99 acgccgatgccactaataatttgagaaaatcacataatt 137  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  10572653 acgccgacaccactaataatttgagaaaatcacataatt 10572615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 12245038 - 12245004
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  12245038 tgtttataagtgggggcaatcctcacctcacaagc 12245004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 138
Target Start/End: Complemental strand, 14332697 - 14332667
Alignment:
Q  108 ccactaataatttgagaaaatcacataattt 138  Q
    |||||||||||||||||||||||||||||||    
T  14332697 ccactaataatttgagaaaatcacataattt 14332667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 17468316 - 17468382
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcac 208  Q
    |||||| ||||| ||||||||||||   ||| ||| |||||||||||||| |||||||||| |||||    
T  17468316 agagtcccacatcggataagagatggtctgacaatatgtttataagtgggggcaatcctcatctcac 17468382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 21765096 - 21765165
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||  || ||||| |||| | ||||||||||||||| ||| ||||||||| ||||||    
T  21765096 agagtctcacattggatgtgatatgacctgatcaagtgtttataagtggg-gcagtcctcaccttacaagc 21765165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 25713397 - 25713435
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  25713397 aatgtgtttataagtgggggcaatcgtcacctcacaagc 25713435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 26173304 - 26173266
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  26173304 aatgtgtttataagtgggggcaatcatcacctcacaagc 26173266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 38080577 - 38080646
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||| ||||| ||||  |||||| | ||| ||||||||||||| |||| ||||||||||||||||||||    
T  38080577 agagtcccacatcggatgggagatggcctgacaatgtgtttataattggg-gcaatcctcacctcacaagc 38080646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 369639 - 369676
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  369639 aatgtgtttataagtgggggcaatcctcaccttacaag 369676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 12376529 - 12376480
Alignment:
Q  162 agatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||  ||||||||||||||||| |||||| |||| |||||||    
T  12376529 agatgacatgaacatgtgtttataagtgggggcaatcttcacttcacaag 12376480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 20208606 - 20208573
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctca 207  Q
    |||||||||||||||||| |||||||||||||||    
T  20208606 aatgtgtttataagtgggggcaatcctcacctca 20208573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 26177115 - 26177180
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctca 207  Q
    |||||| ||||| ||| | || ||||| ||| || ||||||||||||||| |||||||||||||||    
T  26177115 agagtcccacatcggacaggacatgacctgacaacgtgtttataagtgggggcaatcctcacctca 26177180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 137
Target Start/End: Original strand, 34298440 - 34298469
Alignment:
Q  108 ccactaataatttgagaaaatcacataatt 137  Q
    ||||||||||||||||||||||||||||||    
T  34298440 ccactaataatttgagaaaatcacataatt 34298469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 44254140 - 44254193
Alignment:
Q  243 tttctaatatggtatcatagtctcctctaagatccgttggaccacatgctatca 296  Q
    ||||||| ||| ||||| ||||||||  |||||||||| |||||||||||||||    
T  44254140 tttctaacatgatatcagagtctccttcaagatccgttagaccacatgctatca 44254193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 49142958 - 49142995
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  49142958 atgtgtttataagtgggggcaatcctcagctcacaagc 49142995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 137
Target Start/End: Complemental strand, 7918265 - 7918237
Alignment:
Q  109 cactaataatttgagaaaatcacataatt 137  Q
    |||||||||||||||||||||||||||||    
T  7918265 cactaataatttgagaaaatcacataatt 7918237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 9632196 - 9632264
Alignment:
Q  143 gagtctcacattggataagagatgacatga-taatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||||||||||||||||| |||  ||| | ||||||||| ||  ||||| |||||||||||    
T  9632196 gagtctcacattggataagagatgacctgacaaatatatttataagttgggacaatcttcacctcacaa 9632264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 17412308 - 17412372
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctc 206  Q
    |||||||||||| ||||| |||||    ||||||||||||||||||||||  |||||| ||||||    
T  17412308 agagtctcacatcggataggagattgtctgataatgtgtttataagtggggacaatccgcacctc 17412372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 287
Target Start/End: Original strand, 67283 - 67399
Alignment:
Q  175 atgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctct 270  Q
    ||||||||||||||||| |||||| |||||||||||||    ||| ||| ||||||||| | |||| ||||  |||||| || |||||  ||||||||      
T  67283 atgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaagattgtatccgagtctccttc 67382  T
Q  271 aagatccgttggaccac 287  Q
    |||||||||||||||||    
T  67383 aagatccgttggaccac 67399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 67472 - 67525
Alignment:
Q  157 ataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||| ||||||||| |  ||||||||||||||||| ||||||||||||| ||||    
T  67472 ataaaagatgacataaatatgtgtttataagtgggggcaatcctcaccttacaa 67525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 6278 - 6316
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6278 aatgtgtttataagtgggggcaatcctcacctcacaagc 6316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 5834 - 5709
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| |||||||||| |||||||||    |||| ||  |||||||| |  |||||||| ||||||| ||||||||| || || |||    
T  5834 aatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct-ctc 5736  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||  |||| ||||||||    
T  5735 caagatccattgagccacctgctatca 5709  T

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Target: scaffold0692; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 5624 - 5586
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  5624 aatgtgtttataagtgggggcaatcctcacttcacaagc 5586  T

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Target: scaffold0519 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 1920 - 2045
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    |||||||||||||||||| ||||||||||||| ||||||    |||||||  |||||||| |  |||||||  ||||||| ||||||||| || || |||    
T  1920 aatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcct-ctc 2018  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| |||| || |||||    
T  2019 caagatccattgggccacctgttatca 2045  T

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Target: scaffold0519; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 2155 - 2193
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  2155 aatgtgtttataagtgggggcaatcctcaccttacaagc 2193  T

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Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 14307 - 14432
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatcatagtctcctc 269  Q
    ||||||||||||||||||  ||||| |||||||||||||    |||||||  |||||||| |  |||||||| ||||||| ||||||||| || || |||    
T  14307 aatgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaagatggtatcagagcct-ctc 14405  T
Q  270 taagatccgttggaccacatgctatca 296  Q
     ||||||| |||| ||| ||| |||||    
T  14406 caagatccattgggccatatgttatca 14432  T

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Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 51240 - 51277
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaag 211  Q
    |||||||||||||||||| |||||||||||||||||||    
T  51240 aatgtgtttataagtgggggcaatcctcacctcacaag 51277  T

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Target: scaffold0481 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 3583 - 3462
Alignment:
Q  142 agagtctcacattggataagagatgacatgataatgtgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaac 237  Q
    |||||| ||||| || || ||| |||||||| ||| ||||||||||||||  ||||| |||||||||||||    |||||||  ||||||||    |||     
T  3583 agagtcccacatcggttaggagttgacatgacaatttgtttataagtggggacaatcttcacctcacaagccggttttgtggggttgtgttagacccaat 3484  T
Q  238 cacggtttctaatatggtatca 259  Q
    |||| |||||||||||||||||    
T  3483 cacgatttctaatatggtatca 3462  T

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Target: scaffold0334 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 4505 - 4471
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  4505 tgtttataagtgggggcaatcctcacctcacaagc 4471  T

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Target: scaffold0400 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 3848 - 3938
Alignment:
Q  174 aatgtgtttataagtgggtg-caatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||| ||||||||| | |||||||||||||||||||    |||||||  |||||||| |  |||||||  |||||||||||||||||    
T  3848 aatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatca 3938  T

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Target: scaffold0365 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 4492 - 4582
Alignment:
Q  174 aatgtgtttataagtgggtg-caatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    |||||||| ||||||||| | |||||||||||||||||||    |||||||  |||||||| |  |||||||  |||||||||||||||||    
T  4492 aatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatca 4582  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 137
Target Start/End: Original strand, 26397 - 26426
Alignment:
Q  108 ccactaataatttgagaaaatcacataatt 137  Q
    ||||||||||||||||||||||||||||||    
T  26397 ccactaataatttgagaaaatcacataatt 26426  T

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Target: scaffold0459 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 13337 - 13373
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  13337 aatgtgtttgtaagtgagtgcaatcctcacctcacaa 13373  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 10978 - 11014
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  10978 aatgtgtttgtaagtgagtgcaatcctcacctcacaa 11014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 14644 - 14680
Alignment:
Q  174 aatgtgtttataagtgggtgcaatcctcacctcacaa 210  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  14644 aatgtgtttgtaagtgagtgcaatcctcacctcacaa 14680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 69609 - 69577
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaa 210  Q
    |||||||||||||| ||||||||||||||||||    
T  69609 tgtttataagtgggggcaatcctcacctcacaa 69577  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 9809 - 9773
Alignment:
Q  101 gccgatgccactaataatttgagaaaatcacataatt 137  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  9809 gccgacgccactaataatttgagaaaatcacttaatt 9773  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 56467 - 56552
Alignment:
Q  178 tgtttataagtgggtgcaatcctcacctcacaagc----tttgtggaattgtgttaagttcaaccacggtttctaatatggtatca 259  Q
    ||||||||| || | |||||| |||||||||||||    |||||||  |||||||| |  |||||||| |||||||||||||||||    
T  56467 tgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 56552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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