View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18588_low_8 (Length: 485)

Name: NF18588_low_8
Description: NF18588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18588_low_8
NF18588_low_8
[»] chr2 (35 HSPs)
chr2 (48-469)||(41939597-41940018)
chr2 (1-52)||(38917519-38917570)
chr2 (1-51)||(44398768-44398818)
chr2 (1-50)||(3055640-3055689)
chr2 (1-50)||(6648518-6648567)
chr2 (1-50)||(9047754-9047803)
chr2 (1-50)||(37990012-37990061)
chr2 (1-50)||(41478638-41478687)
chr2 (1-49)||(12337937-12337985)
chr2 (1-49)||(13197710-13197758)
chr2 (1-49)||(15372308-15372356)
chr2 (1-49)||(15896924-15896972)
chr2 (1-52)||(13344566-13344617)
chr2 (1-52)||(30099179-30099230)
chr2 (8-50)||(13344483-13344525)
chr2 (3-53)||(15896838-15896888)
chr2 (1-51)||(44397629-44397679)
chr2 (1-50)||(16243782-16243831)
chr2 (9-50)||(37666609-37666650)
chr2 (1-50)||(41492895-41492944)
chr2 (3-51)||(3055556-3055604)
chr2 (3-51)||(4684016-4684064)
chr2 (9-49)||(16044317-16044357)
chr2 (3-50)||(15372225-15372272)
chr2 (3-50)||(37990097-37990144)
chr2 (3-50)||(41478723-41478770)
chr2 (3-50)||(44397546-44397593)
chr2 (3-50)||(44398685-44398732)
chr2 (3-49)||(13197794-13197840)
chr2 (3-49)||(16044401-16044447)
chr2 (3-49)||(37666694-37666740)
chr2 (8-49)||(6648608-6648649)
chr2 (8-49)||(12338026-12338067)
chr2 (1-46)||(44804581-44804626)
chr2 (21-49)||(20360565-20360593)
[»] chr3 (37 HSPs)
chr3 (1-52)||(46208112-46208163)
chr3 (1-54)||(21295321-21295374)
chr3 (1-52)||(49823378-49823429)
chr3 (1-54)||(8437507-8437560)
chr3 (1-50)||(10298061-10298110)
chr3 (1-50)||(40690995-40691044)
chr3 (3-52)||(46208027-46208076)
chr3 (1-49)||(19557052-19557100)
chr3 (1-49)||(34080030-34080078)
chr3 (1-49)||(38964474-38964522)
chr3 (1-49)||(44785396-44785444)
chr3 (1-49)||(48340479-48340527)
chr3 (1-52)||(37509003-37509054)
chr3 (8-51)||(51406762-51406805)
chr3 (3-49)||(6013336-6013382)
chr3 (1-51)||(9111492-9111542)
chr3 (3-49)||(17653712-17653758)
chr3 (1-51)||(22722013-22722063)
chr3 (3-49)||(37508921-37508967)
chr3 (1-50)||(4238676-4238725)
chr3 (1-50)||(8817385-8817434)
chr3 (1-50)||(17653794-17653843)
chr3 (1-46)||(42507358-42507403)
chr3 (1-49)||(2787832-2787880)
chr3 (3-51)||(19557136-19557184)
chr3 (3-51)||(36095764-36095812)
chr3 (3-51)||(49823465-49823513)
chr3 (3-50)||(4238593-4238640)
chr3 (3-50)||(21295410-21295457)
chr3 (3-50)||(22721930-22721977)
chr3 (3-50)||(34080114-34080161)
chr3 (3-50)||(44785480-44785527)
chr3 (3-49)||(10297979-10298025)
chr3 (3-49)||(35513473-35513519)
chr3 (3-43)||(2787916-2787956)
chr3 (10-50)||(8437424-8437464)
chr3 (1-49)||(42170346-42170394)
[»] chr1 (36 HSPs)
chr1 (1-50)||(34042778-34042827)
chr1 (1-52)||(47216696-47216747)
chr1 (1-51)||(25694401-25694451)
chr1 (1-50)||(12483627-12483676)
chr1 (1-50)||(14984919-14984968)
chr1 (1-49)||(11796015-11796063)
chr1 (1-49)||(27159358-27159406)
chr1 (1-49)||(31842795-31842843)
chr1 (1-49)||(39401966-39402014)
chr1 (1-49)||(44668093-44668141)
chr1 (1-49)||(47777481-47777529)
chr1 (1-43)||(44955212-44955254)
chr1 (9-50)||(1050978-1051019)
chr1 (1-46)||(9981729-9981774)
chr1 (1-50)||(11897053-11897102)
chr1 (1-50)||(11897136-11897185)
chr1 (1-50)||(47588336-47588385)
chr1 (3-51)||(9981645-9981693)
chr1 (1-49)||(26471065-26471113)
chr1 (3-50)||(11795932-11795979)
chr1 (3-50)||(12483712-12483759)
chr1 (1-52)||(16448190-16448241)
chr1 (3-50)||(26471149-26471196)
chr1 (3-50)||(27159442-27159489)
chr1 (8-51)||(34042694-34042737)
chr1 (3-50)||(44668177-44668224)
chr1 (3-49)||(1050888-1050934)
chr1 (362-468)||(21035565-21035671)
chr1 (3-49)||(31842879-31842925)
chr1 (3-49)||(39402050-39402096)
chr1 (3-49)||(47216783-47216829)
chr1 (2-51)||(17556750-17556799)
chr1 (1-50)||(17556835-17556884)
chr1 (8-49)||(23278090-23278131)
chr1 (3-43)||(14984843-14984883)
chr1 (8-52)||(37552230-37552274)
[»] chr7 (32 HSPs)
chr7 (1-53)||(1565725-1565777)
chr7 (1-49)||(31319399-31319447)
chr7 (1-51)||(9268838-9268888)
chr7 (1-50)||(1738446-1738495)
chr7 (1-50)||(7240831-7240880)
chr7 (1-50)||(7482307-7482356)
chr7 (379-468)||(36570109-36570198)
chr7 (1-49)||(22285781-22285829)
chr7 (1-49)||(23314139-23314187)
chr7 (1-49)||(46840942-46840990)
chr7 (3-50)||(22285698-22285745)
chr7 (3-53)||(7482221-7482271)
chr7 (3-49)||(36016280-36016326)
chr7 (1-50)||(36583477-36583526)
chr7 (1-50)||(38063912-38063961)
chr7 (1-49)||(94318-94366)
chr7 (3-51)||(38063997-38064045)
chr7 (1-49)||(38441542-38441590)
chr7 (3-50)||(1565813-1565860)
chr7 (3-50)||(1738531-1738578)
chr7 (3-50)||(7240748-7240795)
chr7 (3-50)||(28536835-28536882)
chr7 (3-50)||(46840859-46840906)
chr7 (3-49)||(23314223-23314269)
chr7 (3-49)||(31319483-31319529)
chr7 (1-43)||(33418458-33418500)
chr7 (3-49)||(36583395-36583441)
chr7 (1-50)||(4790330-4790379)
chr7 (17-50)||(28536750-28536783)
chr7 (21-50)||(32050078-32050107)
chr7 (3-43)||(94402-94442)
chr7 (1-49)||(36016196-36016244)
[»] chr4 (36 HSPs)
chr4 (1-49)||(42797814-42797862)
chr4 (1-50)||(3422142-3422191)
chr4 (1-50)||(41469765-41469814)
chr4 (1-50)||(47838616-47838665)
chr4 (1-49)||(6121893-6121941)
chr4 (1-49)||(7579392-7579440)
chr4 (1-49)||(46797807-46797855)
chr4 (1-49)||(47833693-47833741)
chr4 (1-49)||(51894582-51894630)
chr4 (8-51)||(3904681-3904724)
chr4 (3-50)||(43900548-43900595)
chr4 (1-51)||(3993058-3993108)
chr4 (2-52)||(24704453-24704503)
chr4 (3-49)||(46797725-46797771)
chr4 (1-51)||(53337452-53337502)
chr4 (1-50)||(5986958-5987007)
chr4 (8-49)||(20538686-20538727)
chr4 (1-50)||(33621878-33621927)
chr4 (1-50)||(48336345-48336394)
chr4 (1-49)||(3372203-3372251)
chr4 (3-51)||(33551199-33551247)
chr4 (3-51)||(40913273-40913321)
chr4 (1-57)||(52756757-52756813)
chr4 (3-50)||(3372120-3372167)
chr4 (2-49)||(4780378-4780425)
chr4 (8-51)||(26231575-26231618)
chr4 (3-50)||(47833610-47833657)
chr4 (3-50)||(48336262-48336309)
chr4 (3-49)||(20538770-20538816)
chr4 (3-49)||(24704370-24704416)
chr4 (3-49)||(53337370-53337416)
chr4 (3-52)||(3904767-3904816)
chr4 (3-40)||(33621805-33621842)
chr4 (3-51)||(7579308-7579356)
chr4 (1-49)||(43900631-43900679)
chr4 (3-43)||(52756681-52756721)
[»] chr8 (34 HSPs)
chr8 (1-52)||(54609-54660)
chr8 (1-51)||(2890160-2890210)
chr8 (1-50)||(7785777-7785826)
chr8 (1-50)||(15888351-15888400)
chr8 (2-51)||(25600998-25601047)
chr8 (1-50)||(39571202-39571251)
chr8 (1-50)||(43199353-43199402)
chr8 (1-49)||(6552737-6552785)
chr8 (1-49)||(33289261-33289309)
chr8 (3-49)||(31654613-31654659)
chr8 (8-50)||(32211362-32211404)
chr8 (3-53)||(43199438-43199488)
chr8 (1-55)||(44498181-44498235)
chr8 (1-50)||(7805698-7805747)
chr8 (1-50)||(12763653-12763702)
chr8 (8-57)||(32211452-32211501)
chr8 (1-49)||(3304278-3304326)
chr8 (3-50)||(54696-54743)
chr8 (3-50)||(2890246-2890293)
chr8 (3-50)||(4245665-4245712)
chr8 (3-50)||(7785862-7785909)
chr8 (3-50)||(7805783-7805830)
chr8 (8-59)||(32114465-32114516)
chr8 (3-49)||(3304362-3304408)
chr8 (3-49)||(6552655-6552701)
chr8 (1-43)||(12343146-12343188)
chr8 (3-49)||(12343224-12343270)
chr8 (10-52)||(13578854-13578896)
chr8 (3-49)||(15888436-15888482)
chr8 (3-49)||(32114559-32114605)
chr8 (3-49)||(44498271-44498317)
chr8 (1-50)||(7012253-7012302)
chr8 (1-49)||(8587170-8587218)
chr8 (3-51)||(25601084-25601132)
[»] chr6 (30 HSPs)
chr6 (1-52)||(13853590-13853641)
chr6 (1-51)||(6330197-6330247)
chr6 (1-51)||(11572143-11572193)
chr6 (1-50)||(8099612-8099661)
chr6 (1-50)||(9644778-9644827)
chr6 (1-50)||(9650795-9650844)
chr6 (1-50)||(26602405-26602454)
chr6 (1-49)||(2830417-2830465)
chr6 (1-49)||(8382969-8383017)
chr6 (1-51)||(6068648-6068698)
chr6 (3-53)||(8099526-8099576)
chr6 (7-49)||(22896471-22896513)
chr6 (3-52)||(11572229-11572278)
chr6 (8-49)||(13043758-13043799)
chr6 (3-51)||(2830333-2830381)
chr6 (1-49)||(6143636-6143684)
chr6 (1-49)||(8417793-8417841)
chr6 (8-52)||(35030998-35031042)
chr6 (3-50)||(8383053-8383100)
chr6 (3-50)||(33052878-33052925)
chr6 (1-51)||(3788119-3788169)
chr6 (3-49)||(6330115-6330161)
chr6 (1-51)||(22896544-22896594)
chr6 (3-49)||(26602323-26602369)
chr6 (1-51)||(28747132-28747182)
chr6 (8-49)||(9644696-9644737)
chr6 (8-49)||(9650713-9650754)
chr6 (8-49)||(17992077-17992118)
chr6 (1-50)||(33052793-33052842)
chr6 (3-52)||(35031085-35031134)
[»] chr5 (24 HSPs)
chr5 (1-52)||(17025706-17025757)
chr5 (1-50)||(9395432-9395481)
chr5 (1-54)||(11795250-11795303)
chr5 (1-50)||(13103106-13103155)
chr5 (1-50)||(36563537-36563586)
chr5 (1-50)||(41989406-41989455)
chr5 (1-49)||(6126906-6126954)
chr5 (1-52)||(37642036-37642087)
chr5 (1-51)||(21576028-21576078)
chr5 (1-50)||(13033133-13033182)
chr5 (1-54)||(23360024-23360077)
chr5 (1-49)||(37148955-37149003)
chr5 (3-50)||(582988-583035)
chr5 (3-50)||(13033050-13033097)
chr5 (3-50)||(13103023-13103070)
chr5 (3-50)||(37149039-37149086)
chr5 (3-49)||(9395350-9395396)
chr5 (3-49)||(26350434-26350480)
chr5 (1-46)||(4444042-4444087)
chr5 (3-56)||(41989491-41989544)
chr5 (21-53)||(20578650-20578682)
chr5 (10-50)||(20848073-20848113)
chr5 (17-49)||(20848171-20848203)
chr5 (10-50)||(37641952-37641992)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-49)||(49587-49635)
scaffold0009 (3-50)||(49504-49551)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-50)||(12942-12991)
scaffold0482 (3-50)||(12859-12906)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-50)||(6130-6179)
scaffold0464 (3-49)||(6215-6261)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-50)||(23867-23916)
scaffold0204 (3-50)||(23784-23831)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-50)||(231302-231351)


Alignment Details
Target: chr2 (Bit Score: 418; Significance: 0; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 48 - 469
Target Start/End: Complemental strand, 41940018 - 41939597
Alignment:
Q  48 tataatacaagcttgaatcggcatgtcatgtacactaattaaggagagagagggagagatatcaatccaaaatttgccacaacatatctgagtatatatt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41940018 tataatacaagcttgaatcggcatgtcatgtacactaattaaggagagagagggagagatatcaatccaaaatttgccacaacatatctgagtatatatt 41939919  T
Q  148 gcaaatacaaagacaaaaaggaaattaataaagaagacaaaataaatttagtcatactactagtcttagtcaccaatgtaattagtgcaaaacatgtcca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41939918 gcaaatacaaagacaaaaaggaaattaataaagaagacaaaataaatttagtcatactactagtcttagtcaccaatgtaattagtgcaaaacatgtcca 41939819  T
Q  248 tagctgtcttgtctttatagttaaaacacacatacatcaaactatgactgaaaagattcattttcttgctcaatttcagagccaccatgttcatcatctt 347  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41939818 tagctgtcttgtctttatagttaaaacatacatacatcaaactatgactgaaaagattcattttcttgctcaatttcagagccaccatgttcatcatctt 41939719  T
Q  348 gatcaagacattcgtcaattccataagctttatgtccatttccaaaagccttgatatgatctttaagtgatcttttgtgcttaaaatcggacccacaaca 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41939718 gatcaagacattcgtcaattccataagctttatgtccatttccaaaagccttgatatgatctttaagtgatcttttgtgcttaaaatcggacccacaaca 41939619  T
Q  448 acaataccaaagtttcccacag 469  Q
    ||||||||||||||||||||||    
T  41939618 acaataccaaagtttcccacag 41939597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 38917570 - 38917519
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  38917570 caacttttgttgacccaaaattctcttataaataggaccggagggagtataa 38917519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44398768 - 44398818
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  44398768 caacttttgttgacccaaaattctcttataaataggaccggagggagtata 44398818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3055640 - 3055689
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  3055640 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 3055689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6648567 - 6648518
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  6648567 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 6648518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9047803 - 9047754
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  9047803 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 9047754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37990061 - 37990012
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  37990061 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 37990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41478687 - 41478638
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  41478687 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 41478638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12337985 - 12337937
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  12337985 caacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13197758 - 13197710
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  13197758 caacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15372308 - 15372356
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  15372308 caacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15896924 - 15896972
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  15896924 caacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13344566 - 13344617
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||| | ||||||||||||||||||| ||||||||||||||||    
T  13344566 caacttttgttgatccaaaattctcttataaataggaccggagggagtataa 13344617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30099230 - 30099179
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||| |||||||||| |||||||| ||||||||||||||||    
T  30099230 caacttttgttgacccaaaattctctaataaataggaccggagggagtataa 30099179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 13344525 - 13344483
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  13344525 tgttgacctaaatttctcttataaatagaaccggaggtagtat 13344483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 15896888 - 15896838
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtataat 53  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||||    
T  15896888 acttttgttgacctaaatttctcttataaataggaccggaggtagtataat 15896838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44397629 - 44397679
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| ||||| |||||||||    
T  44397629 caacttttgttgacccaaaattctcttataaataggaccggggggagtata 44397679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16243831 - 16243782
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| |||||| |||||||    
T  16243831 caacttttgttgacccaaaattctcttataaataggaccggatggagtat 16243782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 37666650 - 37666609
Alignment:
Q  9 gttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  37666650 gttgacccaaaattctcttataaataggaccggagggagtat 37666609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41492944 - 41492895
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||| ||||||||||||||| ||||||||||||||    
T  41492944 caacttttgttgacccaaatttctcttataaataggaccggagggagtat 41492895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 3055604 - 3055556
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||    
T  3055604 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 3055556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 4684016 - 4684064
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||    
T  4684016 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 4684064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 16044357 - 16044317
Alignment:
Q  9 gttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  16044357 gttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 15372272 - 15372225
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| || |||||||||||    
T  15372272 acttttgttgacctaaatttctcttataaataggactggagggagtat 15372225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 37990097 - 37990144
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  37990097 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 37990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 41478723 - 41478770
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  41478723 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 41478770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 44397593 - 44397546
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  44397593 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 44398732 - 44398685
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  44398732 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 13197794 - 13197840
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  13197794 acttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 16044401 - 16044447
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  16044401 acttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 37666694 - 37666740
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  37666694 acttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 6648608 - 6648649
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  6648608 tgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 12338026 - 12338067
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  12338026 tgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44804626 - 44804581
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggaggga 46  Q
    |||||| |||| || |||||||||||||||||||| ||||||||||    
T  44804626 caacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 49
Target Start/End: Original strand, 20360565 - 20360593
Alignment:
Q  21 ttctcttataaatagaaccggagggagta 49  Q
    |||||||||||||||||||||||||||||    
T  20360565 ttctcttataaatagaaccggagggagta 20360593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 8e-16; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 46208112 - 46208163
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  46208112 caacttttgttgacctaaaattctcttataaataggaccggagggagtataa 46208163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21295374 - 21295321
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataata 54  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  21295374 caacttttgttgacctaaaattctcttataaataggaccggagggagtacaata 21295321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 49823429 - 49823378
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  49823429 caacttttgttgacccaaaattctcttataaataggaccggagggagtataa 49823378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8437507 - 8437560
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataata 54  Q
    |||||| |||||||  ||||||||||||||||||| ||||||||||||||||||    
T  8437507 caacttttgttgactcaaaattctcttataaataggaccggagggagtataata 8437560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10298061 - 10298110
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  10298061 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 10298110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40691044 - 40690995
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  40691044 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 40690995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 46208076 - 46208027
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  46208076 acttttgttgacctaaatttctcttataaataggaccggagggagtataa 46208027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19557100 - 19557052
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  19557100 caacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34080078 - 34080030
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  34080078 caacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38964474 - 38964522
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  38964474 caacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44785444 - 44785396
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  44785444 caacttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 48340479 - 48340527
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  48340479 caacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37509003 - 37509054
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||| ||||||||||||||||||| |||||||| |||||||    
T  37509003 caacttttgttgacccaaaattctcttataaataggaccggaggtagtataa 37509054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 51406762 - 51406805
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  51406762 tgttgacccaaaattctcttataaataggaccggagggagtata 51406805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 6013382 - 6013336
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9111542 - 9111492
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||| ||||    
T  9111542 caacttttgttgacccaaaattctcttataaataggaccggagggaatata 9111492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 17653758 - 17653712
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||    
T  17653758 acttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22722013 - 22722063
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| |||||| ||||||||    
T  22722013 caacttttgttgacccaaaattctcttataaataggaccggatggagtata 22722063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 37508967 - 37508921
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||    
T  37508967 acttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4238676 - 4238725
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| |||||||| |||||    
T  4238676 caacttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8817434 - 8817385
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| |||||| |||||||    
T  8817434 caacttttgttgacccaaaattctcttataaataggaccggaaggagtat 8817385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17653794 - 17653843
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| |||||||| |||||    
T  17653794 caacttttgttgacccaaaattctcttataaataggaccggaggtagtat 17653843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42507403 - 42507358
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggaggga 46  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||    
T  42507403 caacttttgttgacccaaaattctcttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2787880 - 2787832
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| || ||||| ||||||||||||||||||| |||||||||||||    
T  2787880 caacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 19557136 - 19557184
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||    
T  19557136 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 19557184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 36095764 - 36095812
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| || |||||||||||| |||||||||||||||    
T  36095764 acttttgttgacctaaatttatcttataaataggaccggagggagtata 36095812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 49823465 - 49823513
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||    
T  49823465 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 49823513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 4238640 - 4238593
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  4238640 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 4238593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 21295410 - 21295457
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  21295410 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 21295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 22721977 - 22721930
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  22721977 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 22721930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 34080114 - 34080161
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  34080114 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 34080161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 44785480 - 44785527
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  44785480 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 44785527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 10298025 - 10297979
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  10298025 acttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 35513519 - 35513473
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||||    
T  35513519 acttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 2787916 - 2787956
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggag 43  Q
    |||| |||||||||||| ||||||||||||||| |||||||    
T  2787916 acttttgttgacctaaatttctcttataaataggaccggag 2787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 8437464 - 8437424
Alignment:
Q  10 ttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||||||| ||||||||||||||| |||||||| |||||    
T  8437464 ttgacctaaatttctcttataaataggaccggaggtagtat 8437424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42170394 - 42170346
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| ||| || ||||||    
T  42170394 caacttttgttgacccaaaattctcttataaataggaccagatggagta 42170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34042778 - 34042827
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34042778 caacttttgttgacccaaaattctcttataaatagaaccggagggagtat 34042827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 47216747 - 47216696
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  47216747 caacttttgttgacccaaaattctcttataaatagtaccggagggagtataa 47216696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25694401 - 25694451
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  25694401 caacttttgttgacccaaaattctcttataaataggaccggagggagtata 25694451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12483676 - 12483627
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  12483676 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 12483627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14984919 - 14984968
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  14984919 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 14984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11796015 - 11796063
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  11796015 caacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27159406 - 27159358
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  27159406 caacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31842843 - 31842795
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  31842843 caacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39402014 - 39401966
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  39402014 caacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44668141 - 44668093
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  44668141 caacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47777529 - 47777481
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  47777529 caacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44955254 - 44955212
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggag 43  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  44955254 caacttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 1050978 - 1051019
Alignment:
Q  9 gttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  1050978 gttgacccaaaattctcttataaataggaccggagggagtat 1051019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9981729 - 9981774
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggaggga 46  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||    
T  9981729 caacttttgttgacccaaaattctcttataaataggaccggaggga 9981774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11897102 - 11897053
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||||||  ||||||||||||||| ||||||||||||||    
T  11897102 caacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11897136 - 11897185
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||| ||||||||||||||| ||||||||||||||    
T  11897136 caacttttgttgacccaaatttctcttataaataggaccggagggagtat 11897185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47588385 - 47588336
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| |||||||||||||||||| ||||| |||||||||    
T  47588385 caacttttgttgacccaaaattctcttataaataaaaccgaagggagtat 47588336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 9981693 - 9981645
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||    
T  9981693 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 9981645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26471113 - 26471065
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||| | ||||||||||||||||||| |||||||||||||    
T  26471113 caacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 11795979 - 11795932
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  11795979 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 11795932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 12483712 - 12483759
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  12483712 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 12483759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16448190 - 16448241
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||| ||  ||||||||||||||| ||||||||||||||||    
T  16448190 caacttttgttgacccaactttctcttataaataggaccggagggagtataa 16448241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 26471149 - 26471196
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  26471149 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 26471196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 27159442 - 27159489
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  27159442 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 27159489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 34042737 - 34042694
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||    
T  34042737 tgttgacctaaatttctcttataaataggaccggaggtagtata 34042694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 44668177 - 44668224
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  44668177 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 44668224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 1050934 - 1050888
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  1050934 acttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 468
Target Start/End: Original strand, 21035565 - 21035671
Alignment:
Q  362 tcaattccataagctttatgtccatttccaaaagccttgatatgatctttaagtgatcttttgtgcttaaaatcggacccacaacaacaataccaaagtt 461  Q
    ||||||||||||||   ||| ||| | ||||||||  | |||||||||||||| ||||  || ||||||||||| || ||||||  |||||||||||| |    
T  21035565 tcaattccataagcagcatgaccactcccaaaagctcttatatgatctttaagcgatcgcttatgcttaaaatccgaaccacaaagacaataccaaagct 21035664  T
Q  462 tcccaca 468  Q
    | |||||    
T  21035665 ttccaca 21035671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 31842879 - 31842925
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  31842879 acttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 39402050 - 39402096
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  39402050 acttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 47216783 - 47216829
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  47216783 acttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 17556799 - 17556750
Alignment:
Q  2 aacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    ||||| |||||||||||  ||||||||||||||| ||| |||||||||||    
T  17556799 aacttttgttgacctaactttctcttataaataggaccagagggagtata 17556750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17556835 - 17556884
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||  ||||||||||||||| ||||||||||||||    
T  17556835 caacttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 23278090 - 23278131
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  23278090 tgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 14984883 - 14984843
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggag 43  Q
    |||| |||||||||||| ||||||||||||||| |||||||    
T  14984883 acttttgttgacctaaatttctcttataaataggaccggag 14984843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 37552230 - 37552274
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||||| ||| ||||||||||||||| ||||| ||||||||||    
T  37552230 tgttgacccaaatttctcttataaataggaccggggggagtataa 37552274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1565777 - 1565725
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataat 53  Q
    |||||| |||||||| |||||||||||||||||||||||| ||||||||||||    
T  1565777 caacttttgttgacccaaaattctcttataaatagaaccgaagggagtataat 1565725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31319447 - 31319399
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  31319447 caacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9268838 - 9268888
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  9268838 caacttttgttgacccaaaattctcttataaataggaccggagggagtata 9268888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1738495 - 1738446
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  1738495 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 1738446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7240831 - 7240880
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  7240831 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 7240880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7482307 - 7482356
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  7482307 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 7482356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 468
Target Start/End: Complemental strand, 36570198 - 36570109
Alignment:
Q  379 atgtccatttccaaaagccttgatatgatctttaagtgatcttttgtgcttaaaatcggacccacaacaacaataccaaagtttcccaca 468  Q
    ||||||| |||||||||| ||||||||||||||||| || || ||||| |||||||| || |||||   |||||||||||| || |||||    
T  36570198 atgtccacttccaaaagctttgatatgatctttaagagacctcttgtgtttaaaatcagaaccacagatacaataccaaagctttccaca 36570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22285781 - 22285829
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  22285781 caacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23314187 - 23314139
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  23314187 caacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46840942 - 46840990
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  46840942 caacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 22285745 - 22285698
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  22285745 acttttgttgacctaaatttctcttataaataggaccggagggagtat 22285698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 7482271 - 7482221
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtataat 53  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||||    
T  7482271 acttttgttgacctaaatttctcttataaataggaccggaggtagtataat 7482221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 36016280 - 36016326
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||    
T  36016280 acttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36583477 - 36583526
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| | ||||||||||||    
T  36583477 caacttttgttgacccaaaattctcttataaataggatcggagggagtat 36583526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38063961 - 38063912
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||| ||||||||||    
T  38063961 caacttttgttgacccaaaattctcttataaataggaccagagggagtat 38063912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 94366 - 94318
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| | |||||||||||    
T  94366 caacttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 38063997 - 38064045
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||    
T  38063997 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 38064045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38441542 - 38441590
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||| ||||    
T  38441542 caacttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 1565813 - 1565860
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  1565813 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 1565860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 1738531 - 1738578
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  1738531 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 1738578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 7240795 - 7240748
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  7240795 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 7240748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 28536835 - 28536882
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  28536835 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 46840906 - 46840859
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  46840906 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 46840859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 23314223 - 23314269
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  23314223 acttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 31319483 - 31319529
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  31319483 acttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33418458 - 33418500
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggag 43  Q
    |||||| |||||||| ||||||||||||||||||| |||||||    
T  33418458 caacttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 36583441 - 36583395
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  36583441 acttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4790330 - 4790379
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| | |||||| ||||||||||||||||||| |||||||| |||||    
T  4790330 caacttttattgacccaaaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 28536783 - 28536750
Alignment:
Q  17 aaaattctcttataaatagaaccggagggagtat 50  Q
    ||||||||||||||||||| ||||||||||||||    
T  28536783 aaaattctcttataaataggaccggagggagtat 28536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 50
Target Start/End: Complemental strand, 32050107 - 32050078
Alignment:
Q  21 ttctcttataaatagaaccggagggagtat 50  Q
    ||||||||||||||||||||||||||||||    
T  32050107 ttctcttataaatagaaccggagggagtat 32050078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 94402 - 94442
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggag 43  Q
    |||| |||||||||||| ||||||||||||||| |||||||    
T  94402 acttttgttgacctaaatttctcttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36016244 - 36016196
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| ||| || ||||||    
T  36016244 caacttttgttgacccaaaattctcttataaataggaccagatggagta 36016196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42797814 - 42797862
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  42797814 caacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3422142 - 3422191
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  3422142 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 3422191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41469814 - 41469765
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  41469814 caacttttgttgaccaaaaattctcttataaataggaccggagggagtat 41469765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47838665 - 47838616
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  47838665 caacttttgttgaccaaaaattctcttataaataggaccggagggagtat 47838616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6121941 - 6121893
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  6121941 caacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7579392 - 7579440
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  7579392 caacttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46797807 - 46797855
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  46797807 caacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47833693 - 47833741
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  47833693 caacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 51894630 - 51894582
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  51894630 caacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 3904724 - 3904681
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  3904724 tgttgacccaaaattctcttataaataggaccggagggagtata 3904681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 43900595 - 43900548
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  43900595 acttttgttgacctaaatttctcttataaataggaccggagggagtat 43900548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3993058 - 3993108
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||  |||||||||||||||    
T  3993058 caacttttgttgacccaaaattctcttataaataagaccggagggagtata 3993108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 24704453 - 24704503
Alignment:
Q  2 aacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    ||||| |||||||| ||||||||||||||||||| | ||||||||||||||    
T  24704453 aacttttgttgacccaaaattctcttataaataggatcggagggagtataa 24704503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 46797771 - 46797725
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| |||||||||||||||||||||||| ||||    
T  46797771 acttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 53337452 - 53337502
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| | |||||| ||||||||||||||||||| |||||||||||||||    
T  53337452 caacttttattgacccaaaattctcttataaataggaccggagggagtata 53337502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5986958 - 5987007
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||| ||||||    
T  5986958 caacttttgttgacccaaaattctcttataaataggaccggagagagtat 5987007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 20538727 - 20538686
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  20538727 tgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33621878 - 33621927
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| |||||| |||||||||||| ||||||||||||||    
T  33621878 caacttttgttgacccaaaattatcttataaataggaccggagggagtat 33621927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48336345 - 48336394
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| |||||| |||||||||||| ||||||||||||||    
T  48336345 caacttttgttgacccaaaattttcttataaataggaccggagggagtat 48336394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3372203 - 3372251
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  3372203 caacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 33551247 - 33551199
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||    
T  33551247 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 33551199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 40913273 - 40913321
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||| ||||| ||||||||||||||| |||||||||||||||    
T  40913273 acttttgttgatctaaatttctcttataaataggaccggagggagtata 40913321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 52756757 - 52756813
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataatacaa 57  Q
    |||||| |||||||| |||||||| |||||||||| |||| ||||||||||| ||||    
T  52756757 caacttttgttgacccaaaattcttttataaataggaccgaagggagtataaaacaa 52756813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 3372167 - 3372120
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  3372167 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 3372120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 4780378 - 4780425
Alignment:
Q  2 aacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    ||||| |||||||| ||| ||||||||||||||| |||||||||||||    
T  4780378 aacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 26231618 - 26231575
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||    
T  26231618 tgttgacctaaatttctcttataaataggaccggaggtagtata 26231575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 47833657 - 47833610
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  47833657 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 47833610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 48336309 - 48336262
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  48336309 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 48336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 20538770 - 20538816
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  20538770 acttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 24704416 - 24704370
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  24704416 acttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 53337416 - 53337370
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  53337416 acttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 3904767 - 3904816
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||| |||||||||||| |||| |||||||||| |||||||| |||||||    
T  3904767 acttttgttgacctaaatttcttttataaataggaccggaggtagtataa 3904816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 33621842 - 33621805
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccg 40  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  33621842 acttttgttgacctaaatttctcttataaatagaaccg 33621805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 7579356 - 7579308
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||| ||||||| ||||||||||||||| |||||||| ||||||    
T  7579356 acttttgttaacctaaatttctcttataaataggaccggaggtagtata 7579308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43900631 - 43900679
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||| ||| ||||||||||||||||||| |||||||| ||||    
T  43900631 caacttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 52756721 - 52756681
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggag 43  Q
    |||| |||||||||||| ||||||||||||||| |||||||    
T  52756721 acttatgttgacctaaatttctcttataaataggaccggag 52756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 54660 - 54609
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  54660 caacttttgttgacccaaaattctcttataaataggaccggagggagtataa 54609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2890210 - 2890160
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  2890210 caacttttgttgacccaaaattctcttataaataggaccggagggagtata 2890160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7785826 - 7785777
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  7785826 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 7785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15888400 - 15888351
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||||||    
T  15888400 caacttttgttgacccaaaattctcttataaatagaactggagggagtat 15888351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 25601047 - 25600998
Alignment:
Q  2 aacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  25601047 aacttttgttgacccaaaattctcttataaataggaccggagggagtata 25600998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39571251 - 39571202
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  39571251 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 39571202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43199402 - 43199353
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  43199402 caacttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6552737 - 6552785
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  6552737 caacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33289309 - 33289261
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  33289309 caacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 31654659 - 31654613
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||    
T  31654659 acttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 32211404 - 32211362
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  32211404 tgttgacccaaaattctcttataaataggaccggagggagtat 32211362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 43199438 - 43199488
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtataat 53  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||||    
T  43199438 acttttgttgacctaaatttctcttataaataggaccggaggtagtataat 43199488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44498235 - 44498181
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataatac 55  Q
    |||||| | |||||| ||||||||||||||||||| |||||||||||||| ||||    
T  44498235 caacttttattgacccaaaattctcttataaataggaccggagggagtattatac 44498181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7805747 - 7805698
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| || ||||| ||||||||||||||||||| ||||||||||||||    
T  7805747 caacttttgctgacccaaaattctcttataaataggaccggagggagtat 7805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12763702 - 12763653
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| |||||| |||||||||||| ||||||||||||||    
T  12763702 caacttttgttgacccaaaattatcttataaataggaccggagggagtat 12763653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 32211452 - 32211501
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtataatacaa 57  Q
    |||||||||||| ||||||||||||||| |||||||| ||||| ||||||    
T  32211452 tgttgacctaaatttctcttataaataggaccggaggtagtatgatacaa 32211501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3304326 - 3304278
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  3304326 caacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 54696 - 54743
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  54696 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 54743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 2890246 - 2890293
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  2890246 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 2890293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 4245665 - 4245712
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  4245665 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 4245712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 7785862 - 7785909
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  7785862 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 7785909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 7805783 - 7805830
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  7805783 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 7805830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 32114516 - 32114465
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtataatacaagc 59  Q
    |||||||| |||||| |||||||||||| ||||||||||||||  |||||||    
T  32114516 tgttgacccaaaattttcttataaataggaccggagggagtattttacaagc 32114465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 3304362 - 3304408
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  3304362 acttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 6552701 - 6552655
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  6552701 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12343188 - 12343146
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggag 43  Q
    |||||| |||||||| ||||||||||||||||||| |||||||    
T  12343188 caacttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 12343224 - 12343270
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  12343224 acttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 13578896 - 13578854
Alignment:
Q  10 ttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||||||| |||||||||||||||||| ||||| |||||||    
T  13578896 ttgacctaaatttctcttataaatagaactggaggtagtataa 13578854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 15888436 - 15888482
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  15888436 acttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 32114559 - 32114605
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  32114559 acttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 44498271 - 44498317
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  44498271 acttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7012253 - 7012302
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||| | ||||||||||||||||||| |||||||| |||||    
T  7012253 caacttttgttgatccaaaattctcttataaataggaccggaggaagtat 7012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8587218 - 8587170
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||  ||||||||||||||| |||||||||||||    
T  8587218 caacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 25601084 - 25601132
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| ||||||||||||||| | |||||| ||||||    
T  25601084 acttttgttgacctaaatttctcttataaataggatcggaggtagtata 25601132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13853641 - 13853590
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  13853641 caacttttgttgacccaaaattctcttataaataggaccggagggagtataa 13853590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6330197 - 6330247
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  6330197 caacttttgttgacccaaaattctcttataaataggaccggagggagtata 6330247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11572193 - 11572143
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  11572193 caacttttgttgacccaaaattctcttataaataggaccggagggagtata 11572143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8099612 - 8099661
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  8099612 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 8099661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9644778 - 9644827
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  9644778 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 9644827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9650795 - 9650844
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  9650795 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 9650844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26602405 - 26602454
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  26602405 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 26602454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2830417 - 2830465
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  2830417 caacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8383017 - 8382969
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  8383017 caacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6068648 - 6068698
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||  ||||||||||||||||||| |||||||||||||||    
T  6068648 caacttttgttgactcaaaattctcttataaataggaccggagggagtata 6068698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 8099576 - 8099526
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtataat 53  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||||    
T  8099576 acttttgttgacctaaatttctcttataaataggaccggaggtagtataat 8099526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 22896513 - 22896471
Alignment:
Q  7 ctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  22896513 ctgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 11572229 - 11572278
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||||    
T  11572229 acttttgttgacctaaatttctcttataaataggaccggaggtagtataa 11572278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 13043799 - 13043758
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  13043799 tgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 2830381 - 2830333
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||||    
T  2830381 acttttgttgacctaaatttctcttataaataggaccggaggtagtata 2830333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6143636 - 6143684
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| ||||| || |||||||||||||||||||||||||| ||||||    
T  6143636 caacttttgttgtcccaaaattctcttataaatagaaccggaaggagta 6143684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8417841 - 8417793
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||| ||||||||    
T  8417841 caacttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 35031042 - 35030998
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||    
T  35031042 tgttgacccaaaattctcttataaataggaccggaggaagtataa 35030998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 8383053 - 8383100
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  8383053 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 8383100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 33052878 - 33052925
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  33052878 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 33052925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3788119 - 3788169
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||||||| || |||||||||||  |||||||||||||||    
T  3788119 caacttttgttgacctaaatttatcttataaataagaccggagggagtata 3788169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 6330161 - 6330115
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  6330161 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22896544 - 22896594
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||  ||||||||||||||||||| ||||| |||||||||    
T  22896544 caacttttgttgacaaaaaattctcttataaataggaccggcgggagtata 22896594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 26602369 - 26602323
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  26602369 acttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28747182 - 28747132
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||||| ||||||||||||||||||| || | ||||||||||    
T  28747182 caacttttgttgacccaaaattctcttataaataggactgaagggagtata 28747132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 9644737 - 9644696
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  9644737 tgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 9650754 - 9650713
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  9650754 tgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 17992077 - 17992118
Alignment:
Q  8 tgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||||| ||||||||||||||||||| |||| ||||||||    
T  17992077 tgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33052842 - 33052793
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| | |||||| ||||||||||||||||||| |||||| |||||||    
T  33052842 caacttttattgacccaaaattctcttataaataggaccggatggagtat 33052793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 35031085 - 35031134
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||| |||||||||||| || |||||||||||| |||||||| |||||||    
T  35031085 acttttgttgacctaaatttttcttataaataggaccggaggtagtataa 35031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17025706 - 17025757
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  17025706 caacttttgttgacccaaaattctcttataaataggaccggagggagtataa 17025757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9395432 - 9395481
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  9395432 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 9395481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11795250 - 11795303
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataata 54  Q
    |||||| |||||||| ||||||||||||||||||| || |||||||||||||||    
T  11795250 caacttttgttgacccaaaattctcttataaataggactggagggagtataata 11795303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13103106 - 13103155
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  13103106 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 13103155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36563586 - 36563537
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  36563586 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41989455 - 41989406
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  41989455 caacttttgttgacccaaaattctcttataaataggaccggagggagtat 41989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6126906 - 6126954
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  6126906 caacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37642036 - 37642087
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataa 52  Q
    |||||| | |||||| ||||||||||||||||||| ||||||||||||||||    
T  37642036 caacttttattgacccaaaattctcttataaataggaccggagggagtataa 37642087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21576028 - 21576078
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtata 51  Q
    |||||| |||||| | ||||||||||||||||||| |||||||||||||||    
T  21576028 caacttttgttgatccaaaattctcttataaataggaccggagggagtata 21576078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13033133 - 13033182
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| ||||||||||||||||||| | ||||||||||||    
T  13033133 caacttttgttgacccaaaattctcttataaataggatcggagggagtat 13033182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23360024 - 23360077
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtataata 54  Q
    |||||| |||||||| ||||||||||||||||||| |||||||| |||| ||||    
T  23360024 caacttttgttgacccaaaattctcttataaataggaccggaggtagtaaaata 23360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37149003 - 37148955
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| |||||||| |||||||||| |||||||||||||    
T  37149003 caacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 583035 - 582988
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  583035 acttatgttgacctaaatttctcttataaataggaccggaggtagtat 582988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 13033097 - 13033050
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  13033097 acttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 13103070 - 13103023
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  13103070 acttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 37149039 - 37149086
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  37149039 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 37149086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 9395396 - 9395350
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  9395396 acttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 26350434 - 26350480
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| | |||||||||||    
T  26350434 acttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4444042 - 4444087
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggaggga 46  Q
    |||||| |||||| ||||||||||||||||||||  ||||||||||    
T  4444042 caacttttgttgatctaaaattctcttataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 41989491 - 41989544
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtataataca 56  Q
    |||| |||||||||||| |||||||| |||||| |||||||| ||||| |||||    
T  41989491 acttttgttgacctaaatttctcttacaaataggaccggaggtagtatgataca 41989544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 20578682 - 20578650
Alignment:
Q  21 ttctcttataaatagaaccggagggagtataat 53  Q
    ||||||||||||||||||| |||||||||||||    
T  20578682 ttctcttataaatagaaccagagggagtataat 20578650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 20848113 - 20848073
Alignment:
Q  10 ttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||||||| ||||||||||||||| |||||||| |||||    
T  20848113 ttgacctaaatttctcttataaataggaccggaggtagtat 20848073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 20848171 - 20848203
Alignment:
Q  17 aaaattctcttataaatagaaccggagggagta 49  Q
    ||||||||||||||||||| |||||||||||||    
T  20848171 aaaattctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 37641992 - 37641952
Alignment:
Q  10 ttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||||||| ||||||||||||||| |||||||| |||||    
T  37641992 ttgacctaaatttctcttataaataggaccggaggtagtat 37641952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49587 - 49635
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  49587 caacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 49551 - 49504
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  49551 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 49504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12942 - 12991
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| || ||||| ||||||||||||||||||| ||||||||||||||    
T  12942 caacttttgctgacccaaaattctcttataaataggaccggagggagtat 12991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 12906 - 12859
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  12906 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 12859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6179 - 6130
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| |||||| |||||||||||| ||||||||||||||    
T  6179 caacttttgttgacccaaaattttcttataaataggaccggagggagtat 6130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 6215 - 6261
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  6215 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23867 - 23916
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| |||||||| |||||| |||||||||||| ||||||||||||||    
T  23867 caacttttgttgacccaaaattttcttataaataggaccggagggagtat 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 23831 - 23784
Alignment:
Q  3 acttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  23831 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 23784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 231351 - 231302
Alignment:
Q  1 caacttctgttgacctaaaattctcttataaatagaaccggagggagtat 50  Q
    |||||| ||||||||||| |||||| ||||||||| ||||||||||||||    
T  231351 caacttttgttgacctaatattctcctataaataggaccggagggagtat 231302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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