View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1858_high_75 (Length: 238)
Name: NF1858_high_75
Description: NF1858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1858_high_75 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 15160639 - 15160858
Alignment:
| Q |
1 |
atattgtgttgaagtcaatgaaaggtgttttaattgttgttactattgttgattacatgttctcaggatcaaatcatggtgttgaagttattcatttgga |
100 |
Q |
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| T |
15160639 |
atattgtgttgaaatctatgaaaggtgttttaaatggtgttactattgttgataacatgttctctggatcaaatcaaggtgttgaagttattcatttgga |
15160738 |
T |
|
| Q |
101 |
taaatcaaatggtccttttcatcaaattgatcaagttactgttgataggaacgtagcgacagggatgaatttaaaggctactgtcgcgaaaagatcgttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
15160739 |
taaatcaaatggtccttttcatcaaattgatcaagttactgttgataggaacgtagcgacggggatgaatttaaaggctactgtcgcgaaaagatcgttg |
15160838 |
T |
|
| Q |
201 |
caagggaatggtacttcatg |
220 |
Q |
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|||||||||||||||||||| |
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| T |
15160839 |
caagggaatggtacttcatg |
15160858 |
T |
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