View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1858_high_76 (Length: 236)
Name: NF1858_high_76
Description: NF1858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1858_high_76 |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 44847854 - 44847652
Alignment:
| Q |
15 |
aagaagaaaccaggctcggggactaataggaaacaagctaagggagagaagcaatcaaagaaaagtgttcaaggcaatcaaagtagtagaagtactagga |
114 |
Q |
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| T |
44847854 |
aagaagaaaccaggctcggggactaataggaaacaagctaagggagagaagcaatcaaagaaaagtgttcaaggcaatcaaagtagtagaagtactagga |
44847755 |
T |
|
| Q |
115 |
gtaaagctaagtagcaacttttgggcttagaattgttttttggccatggctgtgttcctactctgctctagaacaacagaaggatggtttatcatgttcc |
214 |
Q |
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| T |
44847754 |
gtaaagctaagtagcaacttttgggcttagaattgttttttggccatggctgtgttcctactctgctctagaacaacagaaggatggtttatcatgttcc |
44847655 |
T |
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| Q |
215 |
tgc |
217 |
Q |
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| T |
44847654 |
tgc |
44847652 |
T |
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