View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1858_high_82 (Length: 217)

Name: NF1858_high_82
Description: NF1858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1858_high_82
NF1858_high_82
[»] chr8 (32 HSPs)
chr8 (1-155)||(15255851-15256004)
chr8 (14-158)||(28254834-28254977)
chr8 (14-154)||(599531-599670)
chr8 (14-155)||(16578106-16578246)
chr8 (21-158)||(34799498-34799634)
chr8 (14-155)||(41260669-41260809)
chr8 (14-150)||(18049999-18050134)
chr8 (21-153)||(9796726-9796857)
chr8 (14-150)||(18428169-18428305)
chr8 (1-154)||(41260270-41260422)
chr8 (14-153)||(18049590-18049729)
chr8 (21-155)||(6115525-6115659)
chr8 (14-156)||(28254422-28254564)
chr8 (21-155)||(35427227-35427360)
chr8 (14-155)||(26252809-26252947)
chr8 (60-154)||(7910615-7910709)
chr8 (21-152)||(42035773-42035903)
chr8 (61-162)||(7911070-7911171)
chr8 (21-155)||(34799077-34799211)
chr8 (14-156)||(599906-600047)
chr8 (14-155)||(15256236-15256379)
chr8 (22-155)||(16578512-16578644)
chr8 (12-155)||(42036177-42036320)
chr8 (61-150)||(35694332-35694421)
chr8 (14-151)||(5731220-5731356)
chr8 (60-154)||(18674147-18674241)
chr8 (21-150)||(9797141-9797270)
chr8 (60-155)||(5730815-5730910)
chr8 (68-150)||(28877350-28877432)
chr8 (14-152)||(35693869-35694008)
chr8 (61-151)||(2208716-2208806)
chr8 (102-155)||(35426840-35426893)
[»] chr4 (48 HSPs)
chr4 (14-155)||(34807114-34807255)
chr4 (21-156)||(19528866-19529001)
chr4 (21-151)||(34789797-34789927)
chr4 (12-151)||(54440573-54440709)
chr4 (1-150)||(6617057-6617205)
chr4 (14-155)||(12593431-12593571)
chr4 (1-151)||(33778007-33778156)
chr4 (14-155)||(46737063-46737203)
chr4 (14-151)||(24851873-24852010)
chr4 (21-154)||(55677372-55677505)
chr4 (14-154)||(21034644-21034784)
chr4 (14-155)||(33689827-33689966)
chr4 (18-155)||(45838545-45838681)
chr4 (14-150)||(14439831-14439966)
chr4 (14-154)||(26974282-26974422)
chr4 (14-151)||(28465083-28465219)
chr4 (24-150)||(26974662-26974788)
chr4 (14-153)||(34789382-34789520)
chr4 (62-155)||(41608870-41608963)
chr4 (21-153)||(21034235-21034367)
chr4 (18-150)||(41608377-41608509)
chr4 (14-154)||(12593023-12593162)
chr4 (21-153)||(28465496-28465627)
chr4 (14-150)||(36168332-36168470)
chr4 (14-162)||(54440977-54441124)
chr4 (21-153)||(56077739-56077870)
chr4 (87-151)||(35644042-35644106)
chr4 (154-201)||(19277725-19277772)
chr4 (21-153)||(14440243-14440374)
chr4 (14-150)||(45838955-45839092)
chr4 (81-155)||(24335759-24335833)
chr4 (21-150)||(41114160-41114290)
chr4 (67-151)||(24336223-24336307)
chr4 (14-150)||(6616675-6616811)
chr4 (74-156)||(24851313-24851395)
chr4 (81-155)||(35193776-35193850)
chr4 (81-151)||(51641304-51641374)
chr4 (81-150)||(40160564-40160633)
chr4 (74-158)||(18965135-18965219)
chr4 (61-153)||(30597973-30598065)
chr4 (1-155)||(33777630-33777783)
chr4 (21-52)||(34807554-34807585)
chr4 (14-52)||(24851565-24851603)
chr4 (60-154)||(40160093-40160187)
chr4 (81-118)||(31297163-31297200)
chr4 (74-158)||(229156-229240)
chr4 (74-150)||(229626-229702)
chr4 (16-52)||(35643968-35644004)
[»] chr2 (49 HSPs)
chr2 (14-155)||(16175757-16175898)
chr2 (21-155)||(38007948-38008082)
chr2 (14-159)||(4355749-4355893)
chr2 (1-162)||(6949837-6949999)
chr2 (14-153)||(42192240-42192378)
chr2 (12-154)||(43216115-43216256)
chr2 (14-150)||(33920615-33920750)
chr2 (21-152)||(16953349-16953479)
chr2 (21-150)||(9330209-9330338)
chr2 (14-155)||(15550671-15550812)
chr2 (14-155)||(43160007-43160148)
chr2 (14-155)||(20128145-20128285)
chr2 (14-154)||(42192650-42192790)
chr2 (14-154)||(649526-649665)
chr2 (14-154)||(11539636-11539776)
chr2 (61-155)||(25336054-25336148)
chr2 (21-155)||(62955-63088)
chr2 (21-154)||(6949450-6949583)
chr2 (21-162)||(33921026-33921167)
chr2 (22-154)||(20127735-20127867)
chr2 (21-154)||(38008366-38008498)
chr2 (14-154)||(43160418-43160558)
chr2 (14-156)||(11540046-11540187)
chr2 (14-154)||(32418158-32418295)
chr2 (14-155)||(13315491-13315634)
chr2 (14-115)||(13399460-13399560)
chr2 (14-150)||(4808882-4809017)
chr2 (60-154)||(44220098-44220192)
chr2 (14-155)||(15551082-15551223)
chr2 (14-156)||(44219641-44219782)
chr2 (14-155)||(4356164-4356304)
chr2 (21-154)||(4809294-4809426)
chr2 (60-154)||(31797230-31797324)
chr2 (61-154)||(5560050-5560143)
chr2 (21-155)||(32418561-32418694)
chr2 (14-155)||(24140087-24140222)
chr2 (85-150)||(5561018-5561083)
chr2 (21-154)||(16952934-16953068)
chr2 (21-154)||(17060905-17061039)
chr2 (60-156)||(63417-63513)
chr2 (67-155)||(28143489-28143577)
chr2 (74-156)||(649804-649886)
chr2 (21-155)||(13399835-13399967)
chr2 (67-155)||(20495191-20495279)
chr2 (14-52)||(5560958-5560996)
chr2 (81-155)||(14942320-14942394)
chr2 (67-128)||(2190536-2190597)
chr2 (81-150)||(3824182-3824251)
chr2 (14-51)||(22445741-22445778)
[»] chr3 (58 HSPs)
chr3 (14-154)||(46013421-46013560)
chr3 (14-154)||(51828538-51828678)
chr3 (14-156)||(47431693-47431835)
chr3 (14-155)||(49720369-49720509)
chr3 (14-150)||(40839060-40839195)
chr3 (14-154)||(51827956-51828095)
chr3 (4-154)||(49720759-49720908)
chr3 (21-151)||(52237232-52237361)
chr3 (21-153)||(44676472-44676603)
chr3 (1-149)||(329850-329997)
chr3 (13-156)||(16689355-16689497)
chr3 (14-153)||(40275502-40275639)
chr3 (14-153)||(52375327-52375465)
chr3 (21-154)||(41998644-41998775)
chr3 (14-156)||(55389602-55389743)
chr3 (14-154)||(14654599-14654736)
chr3 (14-154)||(25534889-25535029)
chr3 (14-153)||(40275093-40275233)
chr3 (21-154)||(51472854-51472986)
chr3 (21-156)||(41998226-41998361)
chr3 (14-162)||(49951954-49952101)
chr3 (14-153)||(51828365-51828504)
chr3 (14-147)||(34105056-34105190)
chr3 (21-155)||(32730387-32730520)
chr3 (14-156)||(40838649-40838790)
chr3 (15-153)||(43678295-43678432)
chr3 (21-150)||(51473270-51473399)
chr3 (21-154)||(330251-330383)
chr3 (14-150)||(22370599-22370735)
chr3 (14-155)||(38535703-38535843)
chr3 (14-151)||(52236818-52236954)
chr3 (14-155)||(52375739-52375879)
chr3 (21-154)||(2044270-2044402)
chr3 (21-155)||(38535307-38535440)
chr3 (60-155)||(2051293-2051388)
chr3 (67-154)||(39010074-39010161)
chr3 (21-150)||(49951549-49951677)
chr3 (21-153)||(43678699-43678830)
chr3 (14-150)||(44676880-44677015)
chr3 (14-152)||(46013830-46013968)
chr3 (14-153)||(50662820-50662958)
chr3 (14-151)||(30513724-30513860)
chr3 (21-154)||(16701204-16701339)
chr3 (21-155)||(55390012-55390145)
chr3 (67-152)||(43222850-43222935)
chr3 (67-160)||(49407789-49407882)
chr3 (18-153)||(51828952-51829086)
chr3 (74-154)||(36701105-36701185)
chr3 (81-155)||(27200165-27200239)
chr3 (74-155)||(14654197-14654278)
chr3 (60-153)||(43222390-43222483)
chr3 (14-156)||(32730797-32730938)
chr3 (67-151)||(36701556-36701640)
chr3 (60-155)||(50900980-50901075)
chr3 (62-155)||(33412609-33412702)
chr3 (74-154)||(34104637-34104717)
chr3 (60-152)||(37075687-37075779)
chr3 (12-52)||(37847226-37847265)
[»] chr7 (41 HSPs)
chr7 (1-156)||(5333877-5334031)
chr7 (14-155)||(25637195-25637336)
chr7 (14-153)||(27245203-27245342)
chr7 (21-152)||(39388682-39388813)
chr7 (21-147)||(35161216-35161342)
chr7 (21-163)||(16081714-16081855)
chr7 (14-150)||(26026320-26026456)
chr7 (14-154)||(9181817-9181959)
chr7 (21-159)||(786776-786914)
chr7 (21-155)||(7732486-7732619)
chr7 (14-150)||(28687907-28688041)
chr7 (61-155)||(48247585-48247679)
chr7 (14-155)||(48247999-48248140)
chr7 (21-153)||(24929718-24929854)
chr7 (14-150)||(25637606-25637741)
chr7 (14-151)||(9181534-9181670)
chr7 (12-153)||(26048353-26048492)
chr7 (61-151)||(5334273-5334363)
chr7 (14-150)||(5745642-5745777)
chr7 (21-154)||(5746054-5746187)
chr7 (67-154)||(34595232-34595319)
chr7 (14-150)||(11973810-11973945)
chr7 (21-152)||(15712366-15712496)
chr7 (12-154)||(7732893-7733034)
chr7 (76-155)||(16917711-16917790)
chr7 (67-156)||(787246-787335)
chr7 (21-154)||(16081298-16081430)
chr7 (60-154)||(2758151-2758245)
chr7 (21-151)||(14311317-14311447)
chr7 (23-154)||(11971333-11971467)
chr7 (14-151)||(27245612-27245748)
chr7 (14-153)||(28687593-28687731)
chr7 (67-155)||(39136684-39136772)
chr7 (21-150)||(14311702-14311830)
chr7 (67-153)||(4477702-4477788)
chr7 (67-154)||(45815343-45815427)
chr7 (74-154)||(39137000-39137080)
chr7 (97-156)||(5184425-5184484)
chr7 (108-151)||(34594585-34594628)
chr7 (88-150)||(40669689-40669751)
chr7 (74-155)||(49064187-49064268)
[»] chr6 (18 HSPs)
chr6 (14-153)||(31073550-31073688)
chr6 (14-154)||(31574133-31574272)
chr6 (21-155)||(5120884-5121017)
chr6 (27-155)||(25468847-25468976)
chr6 (12-162)||(28636283-28636431)
chr6 (14-159)||(29891074-29891218)
chr6 (14-153)||(25472420-25472559)
chr6 (14-154)||(5114467-5114606)
chr6 (67-153)||(32836456-32836542)
chr6 (14-155)||(30251099-30251240)
chr6 (21-150)||(24640600-24640728)
chr6 (1-153)||(31073143-31073301)
chr6 (14-155)||(31573718-31573863)
chr6 (14-52)||(29891488-29891526)
chr6 (102-152)||(30250722-30250772)
chr6 (60-154)||(35163640-35163734)
chr6 (81-155)||(835392-835466)
chr6 (14-52)||(28636604-28636642)
[»] chr5 (25 HSPs)
chr5 (14-154)||(28289683-28289822)
chr5 (14-155)||(18150131-18150272)
chr5 (3-154)||(5161965-5162116)
chr5 (60-152)||(32697679-32697771)
chr5 (14-155)||(21371104-21371244)
chr5 (21-155)||(4967184-4967319)
chr5 (1-157)||(18149729-18149884)
chr5 (14-158)||(28290052-28290195)
chr5 (21-149)||(38900648-38900775)
chr5 (21-155)||(15115510-15115640)
chr5 (14-156)||(15029717-15029858)
chr5 (14-152)||(8419029-8419165)
chr5 (61-150)||(14340864-14340953)
chr5 (60-153)||(38901093-38901186)
chr5 (12-150)||(4966819-4966955)
chr5 (21-153)||(19291356-19291488)
chr5 (60-155)||(16752580-16752675)
chr5 (81-156)||(28495305-28495380)
chr5 (74-152)||(10721787-10721865)
chr5 (74-155)||(22651778-22651859)
chr5 (81-154)||(41834533-41834606)
chr5 (74-150)||(14340401-14340477)
chr5 (81-157)||(17260694-17260770)
chr5 (81-152)||(28494845-28494916)
chr5 (14-48)||(21370798-21370832)
[»] chr1 (46 HSPs)
chr1 (14-155)||(34555377-34555519)
chr1 (14-151)||(10278550-10278687)
chr1 (27-154)||(29438929-29439056)
chr1 (21-152)||(16298683-16298813)
chr1 (23-153)||(443968-444097)
chr1 (21-154)||(30786770-30786903)
chr1 (14-156)||(1837502-1837643)
chr1 (14-150)||(17641772-17641912)
chr1 (21-151)||(44582059-44582188)
chr1 (14-155)||(39485063-39485202)
chr1 (14-154)||(52335918-52336057)
chr1 (21-155)||(37421158-37421293)
chr1 (14-153)||(2868116-2868254)
chr1 (21-154)||(4080020-4080152)
chr1 (60-151)||(50304441-50304532)
chr1 (14-153)||(23340183-23340321)
chr1 (14-156)||(34555788-34555931)
chr1 (11-154)||(37505066-37505209)
chr1 (14-153)||(9992563-9992701)
chr1 (14-152)||(44954634-44954771)
chr1 (14-156)||(8230049-8230190)
chr1 (14-155)||(9992152-9992293)
chr1 (21-153)||(37505483-37505613)
chr1 (67-155)||(29021325-29021413)
chr1 (67-155)||(44802631-44802719)
chr1 (14-155)||(8229635-8229778)
chr1 (21-150)||(21938566-21938694)
chr1 (14-153)||(10278958-10279093)
chr1 (60-150)||(45048158-45048248)
chr1 (76-152)||(23526659-23526735)
chr1 (61-155)||(17088593-17088687)
chr1 (14-150)||(44954229-44954364)
chr1 (1-150)||(29439316-29439465)
chr1 (67-151)||(50926232-50926316)
chr1 (14-115)||(17641403-17641503)
chr1 (60-155)||(30787251-30787346)
chr1 (81-151)||(2867913-2867983)
chr1 (81-155)||(45048609-45048683)
chr1 (14-155)||(16299090-16299229)
chr1 (60-150)||(37421397-37421488)
chr1 (27-151)||(44582479-44582603)
chr1 (67-158)||(50926701-50926792)
chr1 (14-52)||(1744427-1744465)
chr1 (67-125)||(9833612-9833670)
chr1 (81-154)||(39843498-39843571)
chr1 (61-150)||(50305239-50305328)
[»] scaffold0097 (2 HSPs)
scaffold0097 (23-154)||(46265-46396)
scaffold0097 (21-155)||(46682-46816)
[»] scaffold0712 (2 HSPs)
scaffold0712 (14-150)||(6799-6939)
scaffold0712 (14-153)||(6392-6530)
[»] scaffold0709 (2 HSPs)
scaffold0709 (14-150)||(6817-6957)
scaffold0709 (14-153)||(6410-6548)
[»] scaffold0007 (2 HSPs)
scaffold0007 (67-151)||(205827-205911)
scaffold0007 (67-154)||(210797-210884)
[»] scaffold1432 (1 HSPs)
scaffold1432 (81-155)||(539-613)
[»] scaffold0025 (1 HSPs)
scaffold0025 (12-52)||(78417-78457)


Alignment Details
Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 15256004 - 15255851
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggta 100  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||       |||||| |||||| |||||| ||||||||||||||||||||    
T  15256004 actaaaactgtcatttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggta 15255906  T
Q  101 tgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
     ||||||||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  15255905 ggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 15255851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 28254834 - 28254977
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||        ||||| |||||| |||||| |||||||||||||||||||| ||||||||||||    
T  28254834 tttctggagttggaaatagggagataggactaaaactgcaaaaatt-atatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgt 28254932  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatat 158  Q
    ||||| ||||||||| |||||| |||||||||||||||| |||||    
T  28254933 gagttggtcaaaatgcaaggaccaaaagtgtaattaagcatatat 28254977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 599670 - 599531
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||| ||||||||||||       |||||| |||||| | |||| |||||||||||||||||||||||||||||||||    
T  599670 tttctggagttggaaatagggagatatgactaaaactgcaaaaaa-catataatttagggatgattttgttcgatttaaaagaggtatgaccaatttcgt 599572  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| ||||||||| |||||| |||| |||||||||||||    
T  599571 gagttggtcaaaatgcaaggaccaaaaatgtaattaagcct 599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 16578246 - 16578106
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||| ||||||||       |||||| |||||| |||||| |||||||||||||||||||| ||||||||||||    
T  16578246 tttctggagttggaaatagggagataggaccaaaactgcaaaaaa-catataatttagggacgattttgttcgatttaaaagaggtaggaccaatttcgt 16578148  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||||||| ||| || |||| ||||||||||||||    
T  16578147 gagttggtcaaaatgcaagaaccaaaaatgtaattaagccta 16578106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 34799498 - 34799634
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||| ||||||||||||||||||       |||||| |||||| || ||| |||||||||||||||||||| |||||||||||| | || |    
T  34799498 agttggaaataggaagataggactaaaactgcaaaaaa-catatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgttaattgg 34799596  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcctatat 158  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  34799597 tcaaaatgaaaggaccaaaagtgtaattaagcctatat 34799634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 41260669 - 41260809
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||||||||||||||||       |||||| |||||| |||||| ||||||||||||||||||||||| |||||||||    
T  41260669 tttctggagttgaaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgt 41260767  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||  |||||||| || ||| |||||| ||||||||||||    
T  41260768 gagttgatcaaaatgcaatgaccaaaagtataattaagccta 41260809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 18049999 - 18050134
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| |||||||||||||||| |||||| ||       |||||| |||||| |||||| |||||||||||||||||||||||||||||||||    
T  18049999 tttctggagttgaaaatagggagataggattaaaacagcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgt 18050097  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| ||||||||| |||||| |||| |||||||||    
T  18050098 gagttggtcaaaatgcaaggaccaaaaatgtaattaa 18050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 9796857 - 9796726
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| ||||||||||||       |||||| |||| | | |||| |||||||||||||||||||| ||||||||| ||||||| |    
T  9796857 agttggaaatagggagatatgactaaaactgcaaaaaa-catatagtttatggatgattttgttcgatttaaaagaggtaggaccaattttgtgagttgg 9796759  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||||| |||||| |||||||||||||||||    
T  9796758 tcaaaatgcaaggaccaaaagtgtaattaagcc 9796726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 18428169 - 18428305
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||||||| |||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||    
T  18428169 tttctggagttggaaatagggagataggagtaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 18428268  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||||||||  ||||| ||||||||||||||    
T  18428269 gagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 41260422 - 41260270
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggta 100  Q
    ||||||| ||||||||||  ||||||||||||||||||| ||||||||||||       |||||| |||| | |||||| |||||||||||||| || ||    
T  41260422 actaaaagtgtcatttctagagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagata 41260324  T
Q  101 tgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
     ||||| |||| |||||| |||||||||  ||||| ||||||||||||||||||    
T  41260323 ggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 41260270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 18049729 - 18049590
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || ||  |||| ||||||    
T  18049729 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagaaccattttcgt 18049630  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| |||||||||  ||||| |||||||||||| ||||    
T  18049629 gagttggtcaaaatggtaggaccaaaagtgtaattgagcc 18049590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 6115525 - 6115659
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||| ||||| |||||||| ||||||||| |       |||||| |||||| |||||| |||||||||||||||||||| ||||||||||| ||||| |    
T  6115525 agttgaaaataaggagatagaactaaaactacaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgcgagttgg 6115624  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||  |||||| |||||| ||||||||||||    
T  6115625 tcaaaatacaaggaccaaaagtataattaagccta 6115659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 28254564 - 28254422
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| ||||| |||||||| || || ||||| ||||||    
T  28254564 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcaatttaaaatagataggaccattttcgt 28254465  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||  ||||||||  ||||| ||||||||||||||| ||||    
T  28254464 gagttgatcaaaatggtaggaccaaaagtgtaattaagtctat 28254422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 35427227 - 35427360
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||||||| |||||||||||||        ||||| |||||| |||||| |||||| |||||||||||||  |||| ||||||||||| |    
T  35427227 agttggaaatagggagatgggactaaaactgcaaaaaat-atataatttagggacgattttgttcggtttaaaagaggtagaaccattttcgtgagttgg 35427325  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||||||  ||||| |||||||||||||||||||    
T  35427326 tcaaaatgcgaggaccaaaagtgtaattaagccta 35427360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 26252947 - 26252809
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||||| |||||| ||||||||||||||||| | | |||||||||||    
T  26252947 tttctggagttggaaatagggagataggactaaaactgcacaaaa-catatagtttagggacgattttgttcgatttaaaagagatgttaccaatttcgt 26252849  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    || ||||||  |||| || ||  |||||||||||||||||||    
T  26252848 gaattagtc--aatgcaaagatcaaaagtgtaattaagccta 26252809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 7910709 - 7910615
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||||| |||||| ||||||||||||||||||||| |||| |||||||||||  ||||||||| ||||| |||| |||||||||||||    
T  7910709 catataatttagggacgattttgttcgatttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaagcct 7910615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 42035903 - 42035773
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||| ||||||||||||||||||||||| |||        ||||| |||| | |||||| ||||||||||||||||||||  |||| ||||||||||| |    
T  42035903 agttagaaatagggagataggactaaaattgcaaaatat-atatagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttgg 42035805  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    ||||||||| ||||| ||||||||||||||||    
T  42035804 tcaaaatgtgaggaccaaaagtgtaattaagc 42035773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 7911070 - 7911171
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatataa 160  Q
    ||||| |||||| |||||| ||||||||||||||||||||  |||| ||||||||||| |||||||||  ||||  ||||||||||||||||| | ||||    
T  7911070 atatagtttagggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaagccaagataa 7911169  T
Q  161 aa 162  Q
    ||    
T  7911170 aa 7911171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 34799211 - 34799077
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||| | |||| | |||||||||||||| |  || ||||| |||| |||||| |    
T  34799211 agttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgactttgttcgatttaaaaaaaataggaccattttcatgagttgg 34799112  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||||||  | ||| |||||||||||||||||||    
T  34799111 tcaaaatggtatgaccaaaagtgtaattaagccta 34799077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 599906 - 600047
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| | |||||||||| |||||| ||||||||||||       |||||| |||| | |||||| ||||| |||||||| || |||||||| ||||||    
T  599906 tttctggaattggaaatagagagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttccatttaaaaaagatatgaccattttcgt 600004  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
     |||| |||||||||  ||||| ||||||||||||||||||||    
T  600005 tagttggtcaaaatggtaggaccaaaagtgtaattaagcctat 600047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 15256236 - 15256379
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn--catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||| ||||||||||||||||||| ||||| ||||||         |||||| |||| | |||||| |||||||||||||| || || ||||| ||||    
T  15256236 tttctggagttggaaatagggagatatgactagaactgcaaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttc 15256335  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
     |||||| |||||||||  ||||| |||||||||||||||||||    
T  15256336 atgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 15256379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 16578512 - 16578644
Alignment:
Q  22 gttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagt 121  Q
    |||||||||||||||||||||||||||||||       |||||| ||||   | |||| |||||||||| ||| || ||| |||| ||||||||||| ||    
T  16578512 gttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaatgatgattttgttcgatttgaaaaagatataaccattttcgtgagttcgt 16578610  T
Q  122 caaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||  ||||| |||||||||||||||||||    
T  16578611 caaaatggtaggaccaaaagtgtaattaagccta 16578644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 42036177 - 42036320
Alignment:
Q  12 catttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||||| ||||||||||| |   ||| ||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| || || ||||    
T  42036177 catttctggagttggaaatatgagaatacgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaagatcattttc 42036276  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    || |||| |||||||||  | || ||||||| ||||||||||||    
T  42036277 gtaagttggtcaaaatgcgaagatgaaaagtataattaagccta 42036320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 35694332 - 35694421
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||| | |||||| |||||||||||||| | ||| ||||| ||| ||||||||||||||||| |||||| ||||||||||||||    
T  35694332 atatagtttaaggacgattttgttcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaa 35694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 5731220 - 5731356
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| |||||||||||||| |||||||||||       |||||| |||| | |||||| ||||||||||| || |||||  ||||||||| |    
T  5731220 tttctggagttgaaaatagggagatagaactaaaactgcaaaaaa-catatagtttatggacgattttgttcgatttataaaaggtagaaccaatttcct 5731318  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||| ||||||||| || ||| |||||| ||||||||    
T  5731319 gagttggtcaaaatgcaatgacaaaaagtataattaag 5731356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 18674241 - 18674147
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||||| |||||| ||||||||||||||| || |  ||||||||||||| || |||||| || |||||| || |||||||||||||||    
T  18674241 catatagtttagggacgattttgttcgatttaaaagtggaagaaccaatttcgtgaattggtcaaagtgcaaggaccaagagtgtaattaagcct 18674147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 9797141 - 9797270
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||| |||||| |||||||||||       |||||| |||| | |||||| | || ||||||||| || ||  |||| ||||||||||| |    
T  9797141 agttggaaataggtagatagaactaaaactgcaaaaaaacatatagtttaaggacgattttatttgatttaaaaaagatagaaccattttcgtgagttgg 9797240  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||||  ||||| ||||||||||||||    
T  9797241 tcaaaatggtaggaccaaaagtgtaattaa 9797270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 5730910 - 5730815
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||| | |||||| |||| ||||||||| || || ||| | ||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  5730910 catatagtttaaggacgattttgtttgatttaaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 5730815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 28877350 - 28877432
Alignment:
Q  68 ttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| || ||| ||||| |||| |||||||||| |||| ||||||||||| |||||||||  ||||| ||||||||||||||    
T  28877350 ttagggacaattttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 35694008 - 35693869
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactg-cnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcg 112  Q
    |||||| |||||||||||||||||||||||||||||||          ||||| |||| | |||||| | ||||||||||||||||||  | || |||||    
T  35694008 tttctggagttggaaatagggagataggactaaaactgaaaaaaatatatatagtttatggacgattttattcgatttaaaagaggtagaatcattttcg 35693909  T
Q  113 tgagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    | | || ||||||||| |||||  ||||||||||||||||    
T  35693908 taaattggtcaaaatgcaaggatcaaaagtgtaattaagc 35693869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 2208806 - 2208716
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||| |||| | |||||| |||||||||||||| || || ||| | ||||||||||| |||||||||  ||||  |||||||||||||||    
T  2208806 atatagtttaaggacgattttgttcgatttaaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaag 2208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 35426893 - 35426840
Alignment:
Q  102 gaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||||||||| |||||||||  ||||| |||||||||||||| ||||    
T  35426893 gaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaaaccta 35426840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 34807255 - 34807114
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||| ||||||||||||||||||||       ||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  34807255 tttctggagttggaaatatggagataggactaaaactgcaaaaaaacatatactttagggacgattttgttcgatttaaaagaggtatgaccaatttcgt 34807156  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||  |||||||| |||||| |||||||||||||||||||    
T  34807155 gagttgatcaaaatgcaaggaccaaaagtgtaattaagccta 34807114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 19529001 - 19528866
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||||| |||||| | |||||||||||||||||| |||||||||||||| || |    
T  19529001 agttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgaattgg 19528902  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||||| |||||| ||||||||||||||||||||    
T  19528901 tcaaaatgcaaggaccaaaagtgtaattaagcctat 19528866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 34789797 - 34789927
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||||| || ||| |||||||||||||||||||| ||||||||||||||||| |    
T  34789797 agttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgagttgg 34789896  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    |||||||| |||||| |||||||||||||||    
T  34789897 tcaaaatgcaaggaccaaaagtgtaattaag 34789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 54440709 - 54440573
Alignment:
Q  12 catttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||||||||||| ||||||||||||||||||||||||||        | ||| |||||| |||||| |||||||||||||||||||| ||||||||||    
T  54440709 catttctgaagttgaaaatagggagataggactaaaactgcaaaaa---acatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttc 54440613  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||||| ||||||||| |||||| |||||||||||||||    
T  54440612 gtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 6617057 - 6617205
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggta 100  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||        ||||| |||||| |||||| | ||||||||||||||||||    
T  6617057 actaaaactgtcatttctggagttggagatagggagataggactaaaactgcaaaaaaa-atatagtttagggacgattttattcgatttaaaagaggta 6617155  T
Q  101 tgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
     ||||||||||||||||||||||||||| ||| |  |||| |||||||||    
T  6617156 ggaccaatttcgtgagttagtcaaaatgcaagtagcaaaaatgtaattaa 6617205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 12593431 - 12593571
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||||||||||||||||        ||||| ||||   |||||| |||||||||||||||||||||||||||||||||    
T  12593431 tttctggagttgaaaatagggagataggactaaaactgcaaaaaat-atatagtttacagacgattttgttcgatttaaaagaggtatgaccaatttcgt 12593529  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||||||| |||||| |||||||||||||||||||    
T  12593530 gagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 12593571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 33778007 - 33778156
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggta 100  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||||||       |||||| ||||||||||||| |||| |||||||||||||||    
T  33778007 actaaaactgtcatttatggagttggaaatagggagatagaactaaaactgcaaaaaa-catataatttaggaacgattttgtttgatttaaaagaggta 33778105  T
Q  101 tgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
      | || |||||||||||||||||||||  || ||||||||||||||||||    
T  33778106 gaatcattttcgtgagttagtcaaaatggtagaacgaaaagtgtaattaag 33778156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 46737063 - 46737203
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||| ||||| ||||| ||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| ||||||||||||    
T  46737063 tttctggagttggagataggaagatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgt 46737161  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||||||| |||||| |||||||||||||||||||    
T  46737162 gagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 46737203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 24851873 - 24852010
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||  ||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| || |||||||||    
T  24851873 tttctggagttggaaatagaaagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgt 24851972  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||| ||||||||| |||||| |||||| ||||||||    
T  24851973 gagttggtcaaaatgcaaggaccaaaagtataattaag 24852010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 55677372 - 55677505
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||||||||||||||||| ||        |||||| |||||  |||||| |||||||||||||||||||| ||||||||||||||||| |    
T  55677372 agttggaaatagggagataggactaaaattgtaaaaaaacatatagtttagagacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttgg 55677471  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||  |||||| ||||||||||||||||||    
T  55677472 tcaaaatacaaggaccaaaagtgtaattaagcct 55677505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 21034644 - 21034784
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||||| |||||||||||        ||||| || ||| |||||| ||||||||||||||||| || ||||||||||||    
T  21034644 tttctggagttggaaatagggagatagaactaaaactgcaaaaaaaaatatagttcagggacgattttgttcgatttaaaagagataggaccaatttcgt 21034743  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| ||||||||| |||||| |||| |||||||||||||    
T  21034744 gagttggtcaaaatgcaaggaccaaaattgtaattaagcct 21034784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 33689966 - 33689827
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||| ||||||||||||       |||||| |||| | |||||| |||||||||||||||||||| ||||||||| ||    
T  33689966 tttctggagttgtaaatagggagatatgactaaaactgcaaaaa--catatagtttaaggacgattttgttcgatttaaaagaggtaggaccaattttgt 33689869  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||||||| |||||| |||||||||||||||||||    
T  33689868 gagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 33689827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 45838681 - 45838545
Alignment:
Q  18 tgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagt 117  Q
    |||||| ||||||||||||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| |||||||| |||||||    
T  45838681 tgaagtaggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtaggaccaattacgtgagt 45838583  T
Q  118 tagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    | ||||||||  |||||| |||||||||| ||||||||    
T  45838582 tggtcaaaatacaaggaccaaaagtgtaaataagccta 45838545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 14439966 - 14439831
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||||| |||||| ||||  |||||||| ||||||||||||||||||    
T  14439966 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgtttaatttaaaaaaggtatgaccaatttcgt 14439868  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| ||||||||| |||||| |||| |||||||||    
T  14439867 gagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 26974422 - 26974282
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||||||||||||||||        |||||| |||| | |||||| |||||||||||||| || |||||||| ||||||    
T  26974422 tttctggagttggaaatagggagataggactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgt 26974323  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| || ||||||  ||||| ||||||||||||||||||    
T  26974322 gagtttgttaaaatggtaggaccaaaagtgtaattaagcct 26974282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 28465219 - 28465083
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||| ||||||||||||       |||||| |||| | |||||| |||||||||||||||||||| || |||||||||    
T  28465219 tttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaagaggtaggatcaatttcgt 28465121  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
     |||| ||||||||| |||||| |||||||||||||||    
T  28465120 aagttggtcaaaatggaaggactaaaagtgtaattaag 28465083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 26974662 - 26974788
Alignment:
Q  24 tggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtca 123  Q
    |||||||||| ||||| ||||||||||||       |||||| |||||| || ||| |||||||||||||||||||| |||||||||||||| ||| |||    
T  26974662 tggaaataggaagatatgactaaaactgcaaaaaaacatatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattca 26974761  T
Q  124 aaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||||| |||| |||||||||    
T  26974762 aaatgcaaggaccaaaaatgtaattaa 26974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 34789520 - 34789382
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||| |||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||    
T  34789520 tttctggagtttgaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 34789422  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| |||||||||  ||||| |||||||||||||||||    
T  34789421 gagttggtcaaaatggtaggaccaaaagtgtaattaagcc 34789382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 41608870 - 41608963
Alignment:
Q  62 tatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||| |||| |||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 41608963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 21034367 - 21034235
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| |||||||||||        |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||||||| |    
T  21034367 agttggaaatagggagatatgactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 21034268  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||||||  ||||| |||||||||||||||||    
T  21034267 tcaaaatggtaggaccaaaagtgtaattaagcc 21034235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 41608509 - 41608377
Alignment:
Q  18 tgaagttggaaatagggagataggactaaaactgcnnnnnnn--catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtga 115  Q
    |||||||||||||| ||||||||||||||||||||         |||||| ||| |  |||||| ||||||||||||||||||||||||||||||| |||    
T  41608509 tgaagttggaaatatggagataggactaaaactgcaaaaaaaaacatatagtttgg--acgattttgttcgatttaaaagaggtatgaccaatttcatga 41608412  T
Q  116 gttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||  |||||||| |||||| ||||||||||||||    
T  41608411 gttgatcaaaatgcaaggaccaaaagtgtaattaa 41608377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 12593162 - 12593023
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| |||||||||||||||| ||||| |||       |||||| |||| | |||||| |||||||||||||| ||||||||||| ||||||    
T  12593162 tttctggagttgaaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaaggtatgaccattttcgt 12593064  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| |||||| ||  ||||| ||||||||||||||||||    
T  12593063 gagttggtcaaactggtaggaccaaaagtgtaattaagcct 12593023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 28465496 - 28465627
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||||||||||||||||| |||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||||||| |    
T  28465496 agttggaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 28465594  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||||||  ||||| |||||||||||||||||    
T  28465595 tcaaaatggtaggaccaaaagtgtaattaagcc 28465627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 36168470 - 36168332
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn--catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||| |||| |||||||||||||| ||||||||||||         |||||| |||| | |||||| |||||||||||||||||||| ||||||||||    
T  36168470 tttctggagttagaaatagggagataagactaaaactgcaaaaaaaaacatataatttaaggacgattttgttcgatttaaaagaggtaagaccaatttc 36168371  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||| ||| ||||||||| |||||  ||||||||||||||    
T  36168370 gtgggttggtcaaaatgcaaggagcaaaagtgtaattaa 36168332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 54440977 - 54441124
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||    
T  54440977 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 54441075  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatataaaa 162  Q
    ||| |  ||||||||  ||||| ||||||||||||||| || |||||||    
T  54441076 gagctgatcaaaatggtaggaccaaaagtgtaattaagtctttataaaa 54441124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 56077739 - 56077870
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||||||| |    
T  56077739 agttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttgg 56077837  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||||||  ||||| |||| ||||||||||||    
T  56077838 tcaaaatggtaggaccaaaaatgtaattaagcc 56077870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 35644042 - 35644106
Alignment:
Q  87 atttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||||||||    
T  35644042 atttaaaagaggtatgacctatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 35644106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 19277772 - 19277725
Alignment:
Q  154 tatataaaacaaaacctttggatcaagtgtcttttctgatgtggaaac 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19277772 tatataaaacaaaacctttggatcaagtgtcttttctgatgtggaaac 19277725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 14440243 - 14440374
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| ||||||||||||       |||||| |||| | | |||| |||||||||||||| || || ||||| |||||| |||| |    
T  14440243 agttggaaatagggagatatgactaaaactgcaaaaaa-catatagtttaaggatgattttgttcgatttaaaaaagataggaccattttcgtaagttgg 14440341  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||||||  ||||| |||||| ||||||||||    
T  14440342 tcaaaatggtaggaccaaaagtataattaagcc 14440374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 45838955 - 45839092
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn--catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||| ||||||||||||| ||||||||||||||||||         |||||| |||| | |||||| |||||||||||||| || || ||||| ||||    
T  45838955 tttctggagttggaaataggaagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggacca-tttc 45839053  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||| ||||||||   ||||| ||||||||||||||    
T  45839054 gtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 24335833 - 24335759
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||||| ||||||| ||||||| ||||||||| | ||||||||| |||||   ||||||||||||||||||    
T  24335833 tgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggatcgaaagtgtaattaagccta 24335759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 41114290 - 41114160
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagtta 119  Q
    ||||||||||||||||||| ||||||||||||        |||||| |||| | ||| || |||||||||||||| || || ||||  |||||||||||     
T  41114290 agttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgtttttgttcgatttaaaaaagataggacccttttcgtgagttg 41114191  T
Q  120 gtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||||||||  ||||| |||||||| |||||    
T  41114190 gtcaaaatggtaggaccaaaagtgtcattaa 41114160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 24336223 - 24336307
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    |||||||||| || |||||||||| ||||||| | ||||| ||||||||| | |||||||||  ||||  |||||||||||||||    
T  24336223 tttaggaacggttttgttcgatttgaaagaggcaggaccattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaag 24336307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 6616811 - 6616675
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||| ||| ||||||||| || ||       |||||| |||| | |||||| |||||||||||||| |  || ||||| ||||||    
T  6616811 tttctggagttggaaatagagaggtaggactaacacagcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaaaataagaccattttcgt 6616712  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||||  ||||||||  || || ||||||||||||||    
T  6616711 gagttgatcaaaatgatagaaccaaaagtgtaattaa 6616675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 24851395 - 24851313
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||| ||||| |||||||| || ||  |||| ||||||||||| |||||||||  ||||  ||||||||||||||||||||    
T  24851395 acgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcctat 24851313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 35193776 - 35193850
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||| ||||| ||||||| | ||||| ||||||||| |  |||||||| |||||| |||||||||||||||||||    
T  35193776 tgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaagccta 35193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 51641304 - 51641374
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    |||| ||||||||| ||| | || |||||||||||||| ||| ||||| |||||| |||||||||||||||    
T  51641304 tgtttgatttaaaaaaggcaggatcaatttcgtgagtttgtctaaatgcaaggactaaaagtgtaattaag 51641374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 40160564 - 40160633
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||| ||||||| ||||| | ||||||||||| ||||||||| |||||| |||| |||||||||    
T  40160564 tgttcaatttgaaagaggcatgactattttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 40160633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 158
Target Start/End: Complemental strand, 18965219 - 18965135
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatat 158  Q
    |||||| |||||||||| ||||||| | ||||  |||||||||| ||| ||||||| ||||  |||| ||||||||||| |||||    
T  18965219 acgattttgttcgatttgaaagaggcaagaccgttttcgtgagtaagttaaaatgtgaggatcaaaaatgtaattaagcttatat 18965135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 30597973 - 30598065
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| |||||| |||||| |||||||||||||||||  |  ||||||| |||||||| |||||||    ||||| ||||||||||| |||||    
T  30597973 atataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggaccaaaagtgtaatcaagcc 30598065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 33777783 - 33777630
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggta 100  Q
    ||||||||| |||||| || ||||| |||| | ||||||||| ||||| |||       |||||| |||| | |||||| |||||||||| ||| |  ||    
T  33777783 actaaaactctcatttatggagttgaaaatggagagataggattaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattttaaaaaaata 33777685  T
Q  101 tgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||| || ||||||||||| |||||||||  ||||  |||||||||||||| ||||    
T  33777684 tgatcattttcgtgagttggtcaaaatggtaggaacaaaagtgtaattaaaccta 33777630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 52
Target Start/End: Original strand, 34807554 - 34807585
Alignment:
Q  21 agttggaaatagggagataggactaaaactgc 52  Q
    ||||||||||||||||||||||||||||||||    
T  34807554 agttggaaatagggagataggactaaaactgc 34807585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 24851603 - 24851565
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgc 52  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  24851603 tttctggagttggaaatagggagataagactaaaactgc 24851565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 40160187 - 40160093
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||||| ||| || |||||||||||||||||| ||||| | ||||||||| | || ||||||   |||  |||| |||||||||||||    
T  40160187 catatagtttagggacggttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatgcggggatcaaaaatgtaattaagcct 40160093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 31297163 - 31297200
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagtt 118  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  31297163 tgttcgatttaaaaaaggcatgaccaatttcgtgagtt 31297200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 158
Target Start/End: Complemental strand, 229240 - 229156
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatat 158  Q
    |||||| ||||| |||| ||||||| | ||||| ||||| ||| | ||||||||   ||||| |||||||||||||| |||||||    
T  229240 acgattttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaaacctatat 229156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 229626 - 229702
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||||| |||| ||||| ||||||| | ||||| ||||||||| | |||||||||  | ||| ||||||||||||||    
T  229626 acgattttgtttgatttgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 35643968 - 35644004
Alignment:
Q  16 tctgaagttggaaatagggagataggactaaaactgc 52  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  35643968 tctggagttggaaatagggagataagactaaaactgc 35644004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 16175757 - 16175898
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||||||||||||||||||||||    
T  16175757 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaagaggtatgaccaatttcgt 16175856  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| || ||||||||||||| ||||||||||||| |||||    
T  16175857 gagttggtaaaaatgtaaggaccaaaagtgtaattatgccta 16175898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 38008082 - 38007948
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| ||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| ||||||||||||||||| |    
T  38008082 agttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttgg 38007983  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||| |||||| |||||||||||||||||||    
T  38007982 tcaaaatgcaaggaccaaaagtgtaattaagccta 38007948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 4355893 - 4355749
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||||||||||||||||    
T  4355893 tttctggagttgaaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgt 4355795  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatata 159  Q
    ||||  ||||||||| |||||| ||||||||||||||||| |||||    
T  4355794 gagtaggtcaaaatgcaaggaccaaaagtgtaattaagccaatata 4355749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6949837 - 6949999
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnnca-tatactttaggaacgattctgttcgatttaaaagaggt 99  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||||        | |||| |||||| |||||| ||||| |||||||||| ||    
T  6949837 actaaaactgtcatttctggagtttgaaatatggagataggactaaaactgcaaaaaaaaaatatagtttagggacgattttgttctatttaaaagatgt 6949936  T
Q  100 atgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatataaaa 162  Q
    | ||||||||||||||||| ||||||||| |||||| ||||||||||||||||| | ||||||    
T  6949937 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaaataaaa 6949999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 42192378 - 42192240
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||| |||||||||||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  42192378 tttctggagttagaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgt 42192280  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| |||||||||| ||||| |||||||||||||||||    
T  42192279 gagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 42192240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 43216115 - 43216256
Alignment:
Q  12 catttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||||| |||||||||||| |||||||||||||||||||        ||||| |||||| |||||| |||||||||||||||||||| ||||||||||    
T  43216115 catttctggagttggaaatagagagataggactaaaactgcaaaaaat-atatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttc 43216213  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||| ||||||| | |||||| ||||||||||||||||||    
T  43216214 gtgagttggtcaaaacgcaaggactaaaagtgtaattaagcct 43216256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 33920750 - 33920615
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||||||||||||||||       |||||| |||||| |||||| ||||||||||||||||||||||| |||||||||    
T  33920750 tttctggagttgaaaatagggagataggactaaaactgcaaaaat-catatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgt 33920652  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| ||||||||| |||||| |||| |||||||||    
T  33920651 gagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 16953349 - 16953479
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||| ||  || |||||||||||||||||||| |||||||||| |||||| |    
T  16953349 agttggaaatagggagataggactaaaactgcaaaaaa-catatactttagggacatttttgttcgatttaaaagaggtaggaccaatttcatgagttgg 16953447  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    |||||||| |||||| ||||||||||||||||    
T  16953448 tcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 9330209 - 9330338
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||| ||||||| ||||||||||||||||||       |||||| ||| || |||||| |||||||||||||||||||||||| ||||||||||||| |    
T  9330209 agttgaaaataggtagataggactaaaactgcaaaaaaacatatagtttggggacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttgg 9330308  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||||||| |||||| ||||||||||||||    
T  9330309 tcaaaatgcaaggaccaaaagtgtaattaa 9330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 15550812 - 15550671
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||| ||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| ||||||||||||    
T  15550812 tttctggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgt 15550713  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| |||| |||| |||||  |||||||||||||| ||||    
T  15550712 gagttggtcagaatgcaaggatcaaaagtgtaattaaaccta 15550671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 43160148 - 43160007
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||||||||||||||||         |||| |||||| |||||| |||||||||||||||||||||||||||||||||    
T  43160148 tttctggagttgaaaatagggagataggactaaaactgcaaaaaaatgtatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgt 43160049  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||  |||||||| |||||| |||| ||||||||| ||||    
T  43160048 gagttgatcaaaatgcaaggaccaaaaatgtaattaatccta 43160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 20128145 - 20128285
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||||||||||||| |||       |||||| |||| | |||||| |||| ||||||||||||||| ||||||||||||    
T  20128145 tttctggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgtttgatttaaaagaggtaggaccaatttcgt 20128243  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| || |||||| |||||| |||||||||||||||||||    
T  20128244 gagttggtaaaaatgcaaggaccaaaagtgtaattaagccta 20128285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 42192650 - 42192790
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||| |||| ||||||||||||       ||| || |||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  42192650 tttctggagttggaaatagggggatatgactaaaactgcaaaaaaacatctagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgt 42192749  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| |||||||||  ||||| ||||||||||||||||||    
T  42192750 gagttggtcaaaatgcgaggaccaaaagtgtaattaagcct 42192790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 649665 - 649526
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||| || |||||||||||       |||||| |||||| |||||| |||||||||||||||||||| ||||||||||||    
T  649665 tttctggagttggaaatagggagacagaactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgt 649567  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
     |||| ||||| ||| |||||| ||||||||||||||||||    
T  649566 aagttggtcaagatgcaaggaccaaaagtgtaattaagcct 649526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 11539776 - 11539636
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| |  || ||||| ||||||    
T  11539776 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaaaataggaccattttcgt 11539677  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| |||||||||  ||||| ||||||||||||||||||    
T  11539676 gagttggtcaaaatggtaggaccaaaagtgtaattaagcct 11539636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 25336054 - 25336148
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| |||||| |||||| |||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  25336054 atataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 25336148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 63088 - 62955
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||| ||| ||||| ||||| ||||||||||| |    
T  63088 agttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattttaaaaaggtaggaccattttcgtgagttgg 62990  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||| |||||| | |||||||||||||||||    
T  62989 tcaaaatggaaggaccataagtgtaattaagccta 62955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 6949583 - 6949450
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| || | | |||||| |||||||||||||| || || ||||| |||||||||||||    
T  6949583 agttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttag 6949484  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||||  ||||| |||| |||||||||||||    
T  6949483 tcaaaatgataggaccaaaaatgtaattaagcct 6949450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 33921026 - 33921167
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       ||| || ||||   |||||| |||||||||||||| || || ||||| ||||||||||| |    
T  33921026 agttggaaatagggagataggactaaaactgcaaaaaaacatttagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 33921125  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcctatataaaa 162  Q
    ||||||||  ||||| ||||||||||||||||||| ||||||    
T  33921126 tcaaaatggtaggaccaaaagtgtaattaagcctaaataaaa 33921167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 20127867 - 20127735
Alignment:
Q  22 gttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagt 121  Q
    |||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| |||||||| || ||    
T  20127867 gttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgaattggt 20127768  T
Q  122 caaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||  ||||| ||||||||||||||||||    
T  20127767 caaaatggtaggaccaaaagtgtaattaagcct 20127735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 38008366 - 38008498
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||||||| |    
T  38008366 agttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 38008464  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||||  ||||| ||||||||||||||||||    
T  38008465 tcaaaatggtaggaccaaaagtgtaattaagcct 38008498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 43160418 - 43160558
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | ||||||  ||||||||||||| || || ||||| ||||||    
T  43160418 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgatttagttcgatttaaaaaagataggaccattttcgt 43160517  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| |||||||||  |||||  |||||||||||||||||    
T  43160518 gagtttgtcaaaatggtaggacctaaagtgtaattaagcct 43160558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 11540046 - 11540187
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||| ||| ||||||||||||       |||||| |||| | |||||| |||||||||||||||||||| ||||| ||||||    
T  11540046 tttctggagttggaaatagggatatatgactaaaactgcaaaaaa-catatagtttatggacgattttgttcgatttaaaagaggtaggaccattttcgt 11540144  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    ||||| |||||||||  | ||| |||||| |||||||||||||    
T  11540145 gagttggtcaaaatgcgatgaccaaaagtataattaagcctat 11540187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 32418295 - 32418158
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||| ||||||| ||||||||||||        ||||| |||||| |||||| |||||||||  ||||||||| ||||||||||||    
T  32418295 tttctggagttggaaataaggagatatgactaaaactgcaaaaaat-atatagtttagggacgattttgttcgatt--aaagaggtaggaccaatttcgt 32418199  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| ||||||||| |||||| | ||||||||||||||||    
T  32418198 gagttggtcaaaatgcaaggaccataagtgtaattaagcct 32418158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 13315634 - 13315491
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn--catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||| ||||||||||||||||||||||||||||||||         |||||| |||| | |||||| |||||||||||||| || |||||||| ||||    
T  13315634 tttctggagttggaaatagggagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttc 13315535  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
     |||||| |||||||||  ||||| |||||||||||||| ||||    
T  13315534 atgagttggtcaaaatggtaggacaaaaagtgtaattaaaccta 13315491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 13399560 - 13399460
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||||| |||||| ||||| |||||||||||||||||||||||||||    
T  13399560 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttccatttaaaagaggtatgaccaatttcgt 13399462  T
Q  114 ga 115  Q
    ||    
T  13399461 ga 13399460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 4809017 - 4808882
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||| |||||||||||||||| |       |||||| |||| | |||||| |||||||||||||||||||| || |||||||||    
T  4809017 tttctggagttggaaataggaagataggactaaaactacaaaaaa-catatagtttatggacgattttgttcgatttaaaagaggtaggatcaatttcgt 4808919  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| ||||||||| ||| || |||| |||||||||    
T  4808918 gagttggtcaaaatgcaagaactaaaaatgtaattaa 4808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 44220098 - 44220192
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||||| |||||| |||| ||||||||| ||||||||||| ||||||||||| |||||||||  ||||| ||||||||||||||||||    
T  44220098 catatagtttagggacgattttgtttgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaagcct 44220192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 15551082 - 15551223
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       ||||||  ||| | |||||| |||||||||||||| |  |||||||| ||| ||    
T  15551082 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatataacttaaggacgattttgttcgatttaaaaaatatatgaccatttttgt 15551181  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| |||||||||  ||| | |||||||||||||| ||||    
T  15551182 gagttggtcaaaatggtagggccaaaagtgtaattaaaccta 15551223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 44219782 - 44219641
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||| ||||||||||||||||||||||       |||||| |||| | || ||| |||||||||||||| ||||| || || ||| ||    
T  44219782 tttctggagttggaaacagggagataggactaaaactgcaaaaaa-catataatttaaggacaattttgttcgatttaaaaaaggtaggatcatttttgt 44219684  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||  |||||||| |||||| ||||||||||||||||||||    
T  44219683 gagttgatcaaaatggaaggaccaaaagtgtaattaagcctat 44219641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 4356164 - 4356304
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||| |||| | |||||||||       |||||| |||| | |||||| |||||||||||||| || |||||||| | ||||    
T  4356164 tttctggagttggaaatagggaaatagaattaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattatcgt 4356262  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| |||||||||  ||||| |||||||||||||||||||    
T  4356263 gagttggtcaaaatgataggaccaaaagtgtaattaagccta 4356304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 4809294 - 4809426
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||| | |||| | ||||| |||||||| |  || ||||| |||||||||||||    
T  4809294 agttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgactttgttcaatttaaaaaacataggaccattttcgtgagttag 4809392  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||||  ||||| ||||||||||||||||||    
T  4809393 tcaaaatggtaggaccaaaagtgtaattaagcct 4809426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 31797230 - 31797324
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||||| ||| || |||||||||| ||||||| ||||||| ||||||||| | |||||||||| ||||| ||||||||||||||||||    
T  31797230 catatagtttagggacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagcct 31797324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 5560143 - 5560050
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| |||| | |||||| ||||| |||||||| || |||||||| ||||||||||| |||||||||  ||||| ||||||||||||||||||    
T  5560143 atatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 5560050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 32418561 - 32418694
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| || |||||||||        ||||| |||| | |||||| ||||||||||||||||||||  | ||||||||||| || |    
T  32418561 agttggaaatagggagataagattaaaactgcaaaaaat-atatagtttaaggacgattttgttcgatttaaaagaggtagaatcaatttcgtgaattgg 32418659  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||||||  ||||| |||||| ||||||||||||    
T  32418660 tcaaaatgataggaccaaaagtataattaagccta 32418694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 24140087 - 24140222
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||| |||| |||||||||||        ||||| |||| | |||||| |||| ||||||||| ||||| ||||| ||||||    
T  24140087 tttctggagttggaaatagggatatagaactaaaactgcaa------atatagtttatggacgattttgtttgatttaaaaaaggtaggaccattttcgt 24140180  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||| |||  ||||  |||||||||||||||||||    
T  24140181 gagttggtcaagatgcgaggaacaaaagtgtaattaagccta 24140222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 5561018 - 5561083
Alignment:
Q  85 cgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||||||||||||||| || ||||||||||||||||| |||||| |||||| ||||| ||||||||    
T  5561018 cgatttaaaagaggtaggatcaatttcgtgagttagttaaaatgcaaggaccaaaagggtaattaa 5561083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 16953068 - 16952934
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagtta 119  Q
    ||||||||||||||||||| ||||||||| ||        |||||| |||| | |||||| |||||||||||||| || || ||| | |||||||||||     
T  16953068 agttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttg 16952969  T
Q  120 gtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||||  ||||| |||||| |||||||||||    
T  16952968 gtcaaaatggtaggaccaaaagtataattaagcct 16952934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 17061039 - 17060905
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagtta 119  Q
    ||||||||||||||||||| ||||||||| ||        |||||| |||| | |||||| |||||||||||||| || || ||| | |||||||||||     
T  17061039 agttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttg 17060940  T
Q  120 gtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||||  ||||| |||||| |||||||||||    
T  17060939 gtcaaaatggtaggaccaaaagtataattaagcct 17060905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 63417 - 63513
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||| |||||| |||||| |||| |||||||||||| || ||||| ||||||||||| ||||||||  |||||| |||| | ||||||| |||||    
T  63417 catatagtttagggacgattttgtttgatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaaacctat 63513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 28143489 - 28143577
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||||| |||||||||| ||||||| | ||||| ||||||||| | |||||||||  ||||| ||||||| |||||||||||    
T  28143489 tttagggacgattttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagccta 28143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 649804 - 649886
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||| |||||||||||||| |  || ||||| ||||||||||| |||||||||  ||||| ||||||||||||||| ||||    
T  649804 acgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaagtctat 649886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 13399835 - 13399967
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| ||||||||||||        ||||| |||| | || ||| ||||||||||||||||  || ||||| ||||||||||| |    
T  13399835 agttggaaatagggagatatgactaaaactgcaaaaaat-atatagtttaaggacaattttgttcgatttaaaagaaata-gaccattttcgtgagttgg 13399932  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||||||  ||||| |||| || |||||||||||    
T  13399933 tcaaaatggtaggactaaaattgcaattaagccta 13399967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 20495279 - 20495191
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||||| |||| ||||||||||||| |||| || ||||||||||| |||||||||  || || ||||||| |||||| ||||    
T  20495279 tttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtgaaattaaaccta 20495191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 5560958 - 5560996
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgc 52  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  5560958 tttctggagttggaaatagggagataggactaaaactgc 5560996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 14942320 - 14942394
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||||| ||||||  | ||||| ||||||||| | |||||||||  | ||| |||||||||||||||||||    
T  14942320 tgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagccta 14942394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 2190536 - 2190597
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatg 128  Q
    |||||| |||||| |||||||||| ||| ||| | ||||||||||||||| | |||||||||    
T  2190536 tttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatg 2190597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 3824182 - 3824251
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||||||||||  || ||||||||||||||||||| || ||||||  | ||| |||||| |||||||    
T  3824182 tgttcgatttaaaaagggcatgaccaatttcgtgagttggttaaaatgcgatgaccaaaagtataattaa 3824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 22445778 - 22445741
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactg 51  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  22445778 tttctgaagttgaaaatagggagatagtactaaaactg 22445741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 4e-37; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 46013560 - 46013421
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||| ||||||||||||       ||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  46013560 tttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatactttagggacgattttgttcgatttaaaagaggtatgaccaatttcgt 46013462  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| ||||||||| |||||  ||||||||||||||||||    
T  46013461 gagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 46013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 51828678 - 51828538
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||||||||| ||||||||||||    
T  51828678 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttacggacgattttgttcgatttaaaagaggtaagaccaatttcgt 51828579  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
     | || ||||||||| |||||| ||||||||||||||||||    
T  51828578 aatttggtcaaaatgcaaggaccaaaagtgtaattaagcct 51828538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 47431835 - 47431693
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||| |||||||||||||||||||||||||||       |||||| ||||   |||||| |||||||||||||||||||||||||| ||||||    
T  47431835 tttctggagttagaaatagggagataggactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgatttaaaagaggtatgaccattttcgt 47431736  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    ||||| |||||||||  ||||| ||||||||||||||||||||    
T  47431735 gagttggtcaaaatggtaggaccaaaagtgtaattaagcctat 47431693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 49720509 - 49720369
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||| |||||| ||||||||||||||||||||       | ||||||||||| |||||| |||||||||||||||||||| ||||||||||||    
T  49720509 tttctggagttagaaataaggagataggactaaaactgcaaaaaa-cgtatactttagggacgattttgttcgatttaaaagaggtaggaccaatttcgt 49720411  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||||||| |||||  |||||||||||||||||||    
T  49720410 gagttggtcaaaatgcaaggatcaaaagtgtaattaagccta 49720369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 40839060 - 40839195
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||| |||||||||||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  40839060 tttctggagttagaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtaagaccattttcgt 40839158  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||||||||| ||||| ||||||||||||||    
T  40839159 gagtttgtcaaaatgtgaggaccaaaagtgtaattaa 40839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 51828095 - 51827956
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| |||||||||||||||||||||| |||       |||||| |||||| |||||| ||||||||||||||||| || ||||||||||||    
T  51828095 tttctggagttgaaaatagggagataggactaaaaatgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagagctaggaccaatttcgt 51827997  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  51827996 gagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 51827956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 49720759 - 49720908
Alignment:
Q  4 aaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatga 103  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||       |||||| |||| | |||||| |||||||||||||| || |||||    
T  49720759 aaaactgtcatttctggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagatatga 49720857  T
Q  104 ccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||| ||||||||||| ||||||||   ||||| ||||||||||||||||||    
T  49720858 ccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcct 49720908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 52237232 - 52237361
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||| |||||||||||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| ||||| ||||||||||| |    
T  52237232 agttagaaatagggagataggactaaaactgcaaaaaa-catataatttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttgg 52237330  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||||||| ||||| |||||||||||||||    
T  52237331 tcaaaatgtgaggaccaaaagtgtaattaag 52237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 44676603 - 44676472
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||| ||||       |||||| |||||| ||| || ||||||||||||||||||||||| ||||||| |||||| |    
T  44676603 agttggaaatagggagataggactaaagctgcaaaaaa-catatagtttagggacggttttgttcgatttaaaagaggtatgatcaatttcatgagtttg 44676505  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||||| |||||| |||||||||||||||||    
T  44676504 tcaaaatgcaaggaccaaaagtgtaattaagcc 44676472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 329997 - 329850
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggta 100  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || ||    
T  329997 actaaaactgtcatttatggagttggaaacagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagtta 329899  T
Q  101 tgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaatta 149  Q
     ||||| ||||||||||| ||||||||| ||| || |||||||||||||    
T  329898 ggaccattttcgtgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 16689497 - 16689355
Alignment:
Q  13 atttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcg 112  Q
    ||||||| ||| |||||||||| |||||||||||||||||       |||||| |||| | |||||| |||||||||||||||||||| |||||||||||    
T  16689497 atttctggagtcggaaatagggtgataggactaaaactgcaaaaaa-catatattttatggacgattttgttcgatttaaaagaggtaggaccaatttcg 16689399  T
Q  113 tgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||| |||||||||  ||||| |||| ||||||||| |||||    
T  16689398 tgagttggtcaaaatgctaggaccaaaactgtaattaaacctat 16689355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 40275502 - 40275639
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||| |||| ||||||||||||       |||||| |||||  |||||| |||||||||||||||||||| ||||| ||||||    
T  40275502 tttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtttagagacgattttgttcgatttaaaagaggtaggacca-tttcgt 40275599  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| |||||||||| ||||| |||||||||||||||||    
T  40275600 gagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 40275639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 52375465 - 52375327
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||| ||||||||||||||| |||||||||||       |||||| |||||| |||||| ||||| |||||||||||||||||||| ||||||    
T  52375465 tttctggagttagaaatagggagatagaactaaaactgcaaaaaa-catatagtttagggacgattttgttcaatttaaaagaggtatgaccattttcgt 52375367  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    || || || ||||||| ||||| |||||||||||||||||    
T  52375366 gaattggttaaaatgtgaggaccaaaagtgtaattaagcc 52375327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 41998644 - 41998775
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||| |||||||||| |||||||||||||||       |||||| || ||| |||||| |||||||||||||||||||| |||||||||||| |||| |    
T  41998644 agttgaaaatagggag-taggactaaaactgcaaaaaaacatatagtt-agggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttgg 41998741  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||| |||||| ||||||||||||||||||    
T  41998742 tcaaaatgcaaggaccaaaagtgtaattaagcct 41998775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 55389743 - 55389602
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| ||||| ||||| ||||||    
T  55389743 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaaggtaggaccattttcgt 55389645  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    ||||| ||| |||||  ||||| ||||||||||||| ||||||    
T  55389644 gagttggtcgaaatgggaggaccaaaagtgtaattatgcctat 55389602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 14654599 - 14654736
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||| ||||||||||||||||||||        | ||| |||| | |||||| ||||||||||||||||||||   ||||||||||    
T  14654599 tttctggagttggaaataaggagataggactaaaactgcaaaaa---acatagtttacggacgattttgttcgatttaaaagaggtagagccaatttcgt 14654695  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  14654696 gagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 14654736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 25535029 - 25534889
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttagga-acgattctgttcgatttaaaagaggtatgaccaatttcg 112  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| ||||||  |||||| |||||||||||||||||||| ||||| ||||     
T  25535029 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catataatttaggggacgattttgttcgatttaaaagaggtaggaccattttca 25534931  T
Q  113 tgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||| || |||||||||  ||||| ||||||||||||||||||    
T  25534930 tgaattggtcaaaatgcgaggaccaaaagtgtaattaagcct 25534889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 40275233 - 40275093
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcg 112  Q
    |||||| |||| |||||| ||||||||||||||||||||        |||| | |||||| || ||| |||||||||||||||||||| ||||| |||||    
T  40275233 tttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttcgatttaaaagaggtaggaccattttcg 40275134  T
Q  113 tgagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||| |||||||||| ||||| |||||||||||||||||    
T  40275133 tgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 40275093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 51472986 - 51472854
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||| || ||| |||| ||||||||||||||| ||  |||||| |||||| |    
T  51472986 agttggaaatagggagataggactaaaactgcaaaaaa-catatactttagggacaattttgtttgatttaaaagaggtaggaaaaatttcatgagttgg 51472888  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||| |||||| |||||| |||||||||||    
T  51472887 tcaaaatgcaaggaccaaaagtataattaagcct 51472854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 41998361 - 41998226
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| ||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||| ||||| |    
T  41998361 agttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgcgagttgg 41998262  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    ||||||||  ||||| ||||||||||||||||||||    
T  41998261 tcaaaatggtaggaccaaaagtgtaattaagcctat 41998226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 49951954 - 49952101
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||| ||||||||||||       ||| || ||||   |||||| |||||||||||||||||||| ||||||||||||    
T  49951954 tttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catgtagtttaatgacgattttgttcgatttaaaagaggtaagaccaatttcgt 49952052  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatataaaa 162  Q
    ||||| ||||||||| |||||| |||| |||||||||||| | ||||||    
T  49952053 gagttggtcaaaatgcaaggaccaaaaatgtaattaagccaaaataaaa 49952101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 51828365 - 51828504
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | || ||| |||||||||||||| |  |||||||| ||||||    
T  51828365 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacaattttgttcgatttaaaaaatatatgaccattttcgt 51828464  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| |||||| ||  ||||| |||||||||||||||||    
T  51828465 gagttggtcaaagtggtaggaccaaaagtgtaattaagcc 51828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 34105056 - 34105190
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcg 112  Q
    |||||||||||||||||| |||||| |||||||||||||        |||||| |||||| |||||| |||||||||||||||||| | |||||| ||||    
T  34105056 tttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatttaaaagagggaggaccaacttcg 34105155  T
Q  113 tgagttagtcaaaatgtaaggacgaaaagtgtaat 147  Q
    | |||| ||||||||| |||||| |||||||||||    
T  34105156 taagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 32730520 - 32730387
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| || |||||||||       |||||| |||||| |||||| ||||| |||||||||||||| ||||||||||  ||||| |    
T  32730520 agttggaaatagggagatacgattaaaactgcaaaaaa-catatagtttagggacgattttgttcaatttaaaagaggtaggaccaatttcaagagttgg 32730422  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||| |||||| |||||||||||||| ||||    
T  32730421 tcaaaatgcaaggaccaaaagtgtaattaaaccta 32730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 40838790 - 40838649
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||| |||| ||||||||||||       |||||| |||| | |||||| |||| ||||||||||||||||||||| ||||||    
T  40838790 tttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtttatggacgattttgtttgatttaaaagaggtatgaccattttcgt 40838692  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    ||||| |||||||||  ||||  |||||||||||||| |||||    
T  40838691 gagttggtcaaaatgcgaggatcaaaagtgtaattaaacctat 40838649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 43678432 - 43678295
Alignment:
Q  15 ttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtg 114  Q
    ||||| ||||||||||||||||||| ||||||||||||       |||||| |||| | |||||| |||||||||||||| || ||||||||  ||||||    
T  43678432 ttctggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagatatgaccatgttcgtg 43678334  T
Q  115 agttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||| |||||||||  ||||| |||||||||||||||||    
T  43678333 agttggtcaaaatggtaggaccaaaagtgtaattaagcc 43678295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 51473270 - 51473399
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||||||| |    
T  51473270 agttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 51473369  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||||  ||||  ||||||||||||||    
T  51473370 tcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 330251 - 330383
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| ||||||||||||       |||||| |||||| |||||| |||| ||||||||| ||||| ||||| ||||||||||| |    
T  330251 agttggaaatagggagatatgactaaaactgcaaaaaa-catatagtttagggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttgg 330349  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||||  ||||| ||| ||||||||||||||    
T  330350 tcaaaatgcgaggaccaaatgtgtaattaagcct 330383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 22370735 - 22370599
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||| ||| ||||||||||||||||||||       |||||| |||||| |||||| |||| | ||||||| ||||| ||||| ||||||    
T  22370735 tttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggtttaaaaaaggtaggaccattttcgt 22370636  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||||||||  ||||| ||||||||||||||    
T  22370635 gagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 38535703 - 38535843
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||||| |||||| | ||||||||||||||| |  ||| ||||||||    
T  38535703 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttattcgatttaaaagagatcggactaatttcgt 38535801  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
     |||| ||||||||| | |||| |||||| ||||||||||||    
T  38535802 aagttggtcaaaatgcacggaccaaaagtataattaagccta 38535843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 52236954 - 52236818
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| |||||||| |||| ||||||||||||       |||||| |||||| |||||| |||||||||||||||||||||||||| ||||||    
T  52236954 tttctggagttgaaaatagggggatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtatgaccattttcgt 52236856  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    || ||  ||||||||  ||||| |||||||||||||||    
T  52236855 gaattgttcaaaatgcgaggactaaaagtgtaattaag 52236818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 52375739 - 52375879
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||  ||| ||||||||||||       |||||| |||| | |||||| ||||| |||||||||||||| ||||| ||||||    
T  52375739 tttctggagttggaaataggggaatatgactaaaactgcaaaaaa-catatagtttatggacgattttgttcaatttaaaagaggtaggaccattttcgt 52375837  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| |||||||||  ||||| |||||||||||||||||||    
T  52375838 gagttggtcaaaatgcgaggaccaaaagtgtaattaagccta 52375879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 2044402 - 2044270
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| |||||||||| |       |||||| |||| | |||||| |||||||||||||||||||||||||| |||| |||||| |    
T  2044402 agttggaaatagggagatatgactaaaact-ccaaaaaacatataatttatggacgattttgttcgatttaaaagaggtatgaccattttcatgagttgg 2044304  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||||  || || ||||||| ||||||||||    
T  2044303 tcaaaatgcgagaaccaaaagtgaaattaagcct 2044270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 38535440 - 38535307
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||||||||||||| |||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| |||| |||||| |    
T  38535440 agttggaaatagggagataggactgaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcctgagttgg 38535342  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||||||  ||||| |||||||||||||||||||    
T  38535341 tcaaaatggtaggaccaaaagtgtaattaagccta 38535307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 2051388 - 2051293
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||| |||||||| |||||||||||||| || || ||||| ||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  2051388 catatagtttaagaacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 2051293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 39010161 - 39010074
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||| |||| ||| ||||||||||||||||||||||| |||||| ||||||| ||||||||| |||||| |||| |||||||||||||    
T  39010161 tttaagaacaattttgttcgatttaaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcct 39010074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 49951677 - 49951549
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||||||||||||||||| |||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||||||| |    
T  49951677 agttggaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 49951579  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||||  ||||| ||||||||||||||    
T  49951578 tcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 43678699 - 43678830
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||| ||||| |||| |||||||       |||||| |||| | |||||| |||||||||||||||||||  |||||| ||||||||||      
T  43678699 agttggaaataggaagatatgactgaaactgcaaaaaa-catatagtttatggacgattttgttcgatttaaaagaggttggaccaagttcgtgagttga 43678797  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||||| |||||| |||||||||||||||||    
T  43678798 tcaaaatgcaaggaccaaaagtgtaattaagcc 43678830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 44676880 - 44677015
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| |||||| ||||||||||||||| |||       |||||| |||| | |||||| |||||||||||||| || |||||||| ||||||    
T  44676880 tttctggagttgaaaatagagagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgt 44676978  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||||||||  ||||| ||||||||||||||    
T  44676979 gagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 46013830 - 46013968
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || ||  |||| ||| |     
T  46013830 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagaaccatttttgg 46013929  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    ||||| |||||||||  || || ||||||||||||||||    
T  46013930 gagttggtcaaaatgatagtaccaaaagtgtaattaagc 46013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 50662820 - 50662958
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| |||||||||| |||||||||||||||       |||||| |||| | |||||| |||||||||||||| || |||||| | ||||||    
T  50662820 tttctggagttgaaaatagggagctaggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagatatgactattttcgt 50662918  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| |||||||||  ||||| |||||| ||||||||||    
T  50662919 gagtttgtcaaaatggtaggaccaaaagtataattaagcc 50662958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 30513860 - 30513724
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    ||||||||||| |||||| ||||||| ||||||||||||       |||||| |||| | |||||| | |||||||||||| || || ||||| ||||||    
T  30513860 tttctgaagttcgaaatatggagatatgactaaaactgcagaaaaacatatagtttaag-acgattttattcgatttaaaaaagataggaccattttcgt 30513762  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||| ||||||||| |||||| |||| ||||||||||    
T  30513761 gagtttgtcaaaatgcaaggaccaaaaatgtaattaag 30513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 16701204 - 16701339
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnn--catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagtt 118  Q
    ||||||||||||||||||| ||||||||||||         |||||| |||| | |||||| ||||||| |||||| || |||||||| |||||||||||    
T  16701204 agttggaaatagggagatatgactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgaattaaaaaagatatgaccattttcgtgagtt 16701303  T
Q  119 agtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
     |||||||||  ||||| |||| |||||||||||||    
T  16701304 ggtcaaaatggtaggaccaaaaatgtaattaagcct 16701339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 55390012 - 55390145
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||||| ||||||||||||| |       |||||| |||||  |||||| |||| ||||||||| ||||| ||||| |||||||| || |    
T  55390012 agttggaaatagggaggtaggactaaaactacaaaaaa-catatagtttagtgacgattttgtttgatttaaaaaaggtaggaccattttcgtgaattgg 55390110  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    | ||||||  ||||| |||||||||||||||||||    
T  55390111 ttaaaatgcgaggaccaaaagtgtaattaagccta 55390145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 43222850 - 43222935
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    |||||| |||||| |||||||||||||||||| ||||||| ||||||| | | |||||||||  ||||| |||||||| |||||||    
T  43222850 tttagggacgattttgttcgatttaaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaagtgtgattaagc 43222935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 49407882 - 49407789
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatataa 160  Q
    |||||| ||| || ||||| |||| ||||||| ||||||| ||||||||| | |||||||||  ||||| ||||||||||||||||||| ||||    
T  49407882 tttagggacggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcctaaataa 49407789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 51828952 - 51829086
Alignment:
Q  18 tgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagt 117  Q
    |||||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||| || |||||| || || ||||| ||||||||||    
T  51828952 tgaagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttaaggacgattttgtttgaattaaaaaagatacgaccattttcgtgagt 51829050  T
Q  118 tagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |  |||||||   | ||| |||||||||||||||||    
T  51829051 tgatcaaaatagtatgaccaaaagtgtaattaagcc 51829086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 36701185 - 36701105
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||||||||| ||||||| |||| || |||||||||||  ||||||||  ||||| ||||||||||||||||||    
T  36701185 acgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaagcct 36701105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 27200165 - 27200239
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||||| ||||||| |  |||| ||||||||| | ||||||||| |||||| |||||||||||||||||||    
T  27200165 tgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagccta 27200239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 14654278 - 14654197
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||||||||||||| || || ||||| ||||||||||| |||||||||  || |  |||||||||||||||||||    
T  14654278 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaagccta 14654197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 43222483 - 43222390
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||| |||||| |||||| |||||||||||||||||  || || | ||||||||||| |||||||||| | ||| ||||  |||||||||||    
T  43222483 catatagtttagggacgattttgttcgatttaaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaacgtaattaagcc 43222390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 32730797 - 32730938
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||| ||||||||||||||||| |||||||||       |||||| |||| | |||||| ||||| |||||||| || || ||||| |||| |    
T  32730797 tttctggagtttgaaatagggagataggattaaaactgcaaaaaa-catatagtttaaggacgattttgttcaatttaaaaaagataggaccattttctt 32730895  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    ||||| || ||||||  | ||| ||||||||||||||| ||||    
T  32730896 gagttggttaaaatggtatgaccaaaagtgtaattaagtctat 32730938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 36701556 - 36701640
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    |||||| | |||| |||||||||| ||||||  ||||||| ||||||||| | |||||||||  ||||| |||||||||||||||    
T  36701556 tttagggatgattttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 50900980 - 50901075
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||||| ||| || ||||||||||  |||||| | | ||| ||| ||||| | |||||||||  ||||| |||||||||||||||||||    
T  50900980 catatagtttagggacggttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagccta 50901075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 33412609 - 33412702
Alignment:
Q  62 tatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||| |||||| |||||| |||||||||  ||||||  |  |||| ||||||||| |  ||||||||  ||||| |||||||||||||||||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaagccta 33412702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 34104717 - 34104637
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| ||||| |||||||| || ||  |||| ||||||||||| |||||||||  || || ||||||||||| ||||||    
T  34104717 acgattttgttcaatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaatgaagcct 34104637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 37075779 - 37075687
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    |||||| |||||| |||  | |||| ||||| ||||||| | ||||| ||||||||||| |||||||||    ||| ||||||||||||||||    
T  37075779 catatagtttagggacgggtttgtttgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaagc 37075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 37847226 - 37847265
Alignment:
Q  12 catttctgaagttggaaatagggagataggactaaaactgc 52  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  37847226 catttctgaagttgaaaatagg-agataggactaaaactgc 37847265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5334031 - 5333877
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggta 100  Q
    ||||||||||||||||||| ||| |||||||||| |||| ||||||||||||       |||||| |||||| |||||| ||||||||||||||||||||    
T  5334031 actaaaactgtcatttctggagtaggaaatagggggatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggta 5333933  T
Q  101 tgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
     ||||| ||||||||||| ||||||||| |||||  ||||||||||||||||||||    
T  5333932 cgaccattttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcctat 5333877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 25637336 - 25637195
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||||||||||||||| |       |||||| |||||| |||||| |||||||||||||||||||| |||||||||| |    
T  25637336 tttctggagttggaaatagggagataggactaaaactacaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcat 25637237  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||| ||| |||||| |||||||||||||||||||    
T  25637236 gagttggtcaatatgcaaggaccaaaagtgtaattaagccta 25637195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 27245342 - 27245203
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||| ||||||||||||||||||||       |||||  ||| || |||||| |||||||||||||||||||| ||||||||||||    
T  27245342 tttctggagttggaaataaggagataggactaaaactgcaaaaaaacatatggtttggggacgattttgttcgatttaaaagaggtaggaccaatttcgt 27245243  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| ||||||||| |||||| |||||||||||||||||    
T  27245242 gagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 27245203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 39388682 - 39388813
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||| ||||||||||||||||||||||||||       |||||| |||||  |||||| |||||||||||||||||||| ||| ||||||||||||| |    
T  39388682 agttgaaaatagggagataggactaaaactgcaaaaaaacatatagtttagagacgattttgttcgatttaaaagaggtaggacaaatttcgtgagttgg 39388781  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    |||||||| |||||| ||||||||||||||||    
T  39388782 tcaaaatgcaaggaccaaaagtgtaattaagc 39388813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 35161216 - 35161342
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| ||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| |||||||| |||||||| |    
T  35161216 agttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggaccaattccgtgagttgg 35161315  T
Q  121 tcaaaatgtaaggacgaaaagtgtaat 147  Q
    |||||||| |||||| |||||||||||    
T  35161316 tcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 16081714 - 16081855
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||||| | |||| |||||||||||||||||||| || |||||||||||||| |    
T  16081714 agttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggatgattttgttcgatttaaaagaggtaggatcaatttcgtgagttgg 16081812  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcctatataaaac 163  Q
    |||||||| |||||| ||| ||||||||||||||  |||||||    
T  16081813 tcaaaatgcaaggaccaaaggtgtaattaagccttgataaaac 16081855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 26026456 - 26026320
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||| ||||||||||||       |||||| |||| | |||||| |||||||||||||||||||||||||||||||||    
T  26026456 tttctggagttgaaaatagggagataagactaaaactgcaaaaaaacatatagtttatggacgattttgttcgatttaaaagaggtatgaccaatttcgt 26026357  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||| | ||||||||  |||||| ||||||||||||||    
T  26026356 gagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 9181817 - 9181959
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn--catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||| |||||||||||||||||||||||||||||||          |||||| |||||| |||||| ||||||||||||||||||||||| |||||||    
T  9181817 tttctggagttggaaatagggagataggactaaaactggaaaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttc 9181916  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||| || ||||||||| |||||  ||||||||||||||||||    
T  9181917 gtgaattggtcaaaatgcaaggatcaaaagtgtaattaagcct 9181959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 786914 - 786776
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||| | |  ||| |||||||||||||| ||||||||||| ||||||||||| |    
T  786914 agttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggaaaattttgttcgatttaaaaaaggtatgaccattttcgtgagttgg 786815  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcctatata 159  Q
    |||||||| |||||  |||||||||||||||||| ||||    
T  786814 tcaaaatggaaggatcaaaagtgtaattaagcctttata 786776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 7732619 - 7732486
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||| ||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||||||||| |||||||||||||||||      
T  7732619 agttgaaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttga 7732521  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||| |||||| |||| ||||||||||||||    
T  7732520 tcaaaatgcaaggaccaaaaatgtaattaagccta 7732486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 28687907 - 28688041
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||| |||||||||||||| |||       |||||| |||||| |||||| ||||||||||||||||||||||| |||||||||    
T  28687907 tttctggagttggaaataggaagataggactaaaagtgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgt 28688005  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| ||||||||| |||||| |||| |||||||||    
T  28688006 gagttggtcaaaatgcaaggaccaaaa-tgtaattaa 28688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 48247679 - 48247585
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||||||| |||||| |||| ||||||||||||||| |||||||||||||||||  |||||||| |||||| |||||||||||||||||||    
T  48247679 atatactttagggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagccta 48247585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 48247999 - 48248140
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||| |||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||| ||    
T  48247999 tttctggagttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgt 48248098  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| |||||||||  ||||| |||||||||||||||||||    
T  48248099 gagttggtcaaaatggtaggaccaaaagtgtaattaagccta 48248140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 24929718 - 24929854
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatac----tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgag 116  Q
    ||||||||||||||||||||||||||||||||        |||||     |||||| |||||| |||| ||||||||||||||| |||||||||||||||    
T  24929718 agttggaaatagggagataggactaaaactgcaaaaaaaaatatatatagtttagggacgattttgtttgatttaaaagaggtaagaccaatttcgtgag 24929817  T
Q  117 ttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    || ||||||||| |||||| |||| ||||||||||||    
T  24929818 ttggtcaaaatgcaaggaccaaaaatgtaattaagcc 24929854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 25637606 - 25637741
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||    
T  25637606 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 25637704  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||||||||  ||||| ||||||||||||||    
T  25637705 gagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 9181670 - 9181534
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||        ||||| |||| | |||||| |||||||||||||| || || ||||| ||||||    
T  9181670 tttctggagttggaaatagggagataggactaaaactgcaaaaaaa-atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 9181572  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||| |||||||||  ||||| |||||||||||||||    
T  9181571 gagttggtcaaaatggtaggaccaaaagtgtaattaag 9181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 26048353 - 26048492
Alignment:
Q  12 catttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    ||||| || ||||||||||||||||||| ||||||||||||       |||||| |||| | || ||| |||| ||||||||||||||| ||||||||||    
T  26048353 catttttggagttggaaatagggagatatgactaaaactgcaaaaa--catatagtttaaggacaattttgtttgatttaaaagaggtaggaccaatttc 26048450  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||||| ||||||| | |||||  |||||||||||||||||    
T  26048451 gtgagttggtcaaaacgcaaggaacaaaagtgtaattaagcc 26048492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 5334273 - 5334363
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||| |||||| |||||| |||||||||||||||||||| ||| | ||||||||||| |||||||||| ||||| |||||||||||||||    
T  5334273 atatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 5334363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 5745777 - 5745642
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||| ||||||||||||||| ||||||||||||       |||||| |||| ||| |||| |||||||||||||| || |||||||| ||||||    
T  5745777 tttctggagtaggaaatagggagataagactaaaactgcaaaaaa-catatagtttaagaaagattttgttcgatttaaaaaagatatgaccattttcgt 5745679  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||||||||  ||||| ||||||||||||||    
T  5745678 gagttggtcaaaatgataggaccaaaagtgtaattaa 5745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 5746054 - 5746187
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagtta 119  Q
    ||||||||||||||||||| |||||||| |||        |||||| |||| | ||| || |||||||||||||||||| | || |||||||||||||||    
T  5746054 agttggaaatagggagataagactaaaattgcaaaaaaaacatatagtttatggacggttttgttcgatttaaaagaggca-gatcaatttcgtgagtta 5746152  T
Q  120 gtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||||| |||||| ||||||||||||||||||    
T  5746153 gtcaaaatgcaaggaccaaaagtgtaattaagcct 5746187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 34595232 - 34595319
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||||| |||||||||||||||| | | ||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  34595232 tttagggacgattttgttcgatttaaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcct 34595319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 11973810 - 11973945
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||||||||||||||||| |||||| |||||||||||       ||| || |||||| |||||| ||||| ||||||||||||||  |||||||||||    
T  11973810 tttctgaagttggaaataggaagatagaactaaaactgcaaaaac-catttaatttagggacgattttgttcaatttaaaagaggtagaaccaatttcgt 11973908  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
      ||| ||||||||| |||||| |||| |||||||||    
T  11973909 acgttggtcaaaatgcaaggaccaaaaatgtaattaa 11973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 15712496 - 15712366
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||||||||||||||||||| |        ||||| |||| | |||||| |||||||||||||| || || ||||| ||||||||||| |    
T  15712496 agttggaaatagggagataggactaaaactacaaaaaat-atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 15712398  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    ||||||||  ||||| ||||||||||||||||    
T  15712397 tcaaaatggtaggaccaaaagtgtaattaagc 15712366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 7732893 - 7733034
Alignment:
Q  12 catttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    ||||| || ||||| |||||||||||||||||||||| |||       |||||| |||| | |||||| |||||||||||||| || || || || ||||    
T  7732893 catttatggagttgaaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggatcattttc 7732991  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||| |||||||||  ||||| ||||||||||||||||||    
T  7732992 gtgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 7733034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 16917790 - 16917711
Alignment:
Q  76 gattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||| |||||||||||||| || |||||||| ||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  16917790 gattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 16917711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 787246 - 787335
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||| |||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||   || || |||||||||||||| |||||    
T  787246 tttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaaacctat 787335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 16081430 - 16081298
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||| ||||||||||||||||||       || ||| |||| | |||||| |||||||||||||| || || ||||| || | |||||| |    
T  16081430 agttggaaataggtagataggactaaaactgcaaaaaa-caaatagtttaaggacgattttgttcgatttaaaaaagataggaccatttccatgagttgg 16081332  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||  |||||| ||||||||||||||||||    
T  16081331 tcaaaatagaaggaccaaaagtgtaattaagcct 16081298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 2758151 - 2758245
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||| | |||||| ||||||||||||||||||||  |||| |||||||||||   |||||||  ||||| ||||||||||||||||||    
T  2758151 catatagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaagcct 2758245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 14311447 - 14311317
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||||||||||| ||||||||        |||||| |||||| |||||| | ||| ||||||||||||||| ||||||||  |||||| |    
T  14311447 agttggaaatagggagataggattaaaactgtaaaaaaacatatagtttagggacgattttattcaatttaaaagaggtataaccaattttatgagttgg 14311348  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    | |||||| ||| || |||| | ||||||||    
T  14311347 ttaaaatgcaagtaccaaaaatataattaag 14311317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 11971467 - 11971333
Alignment:
Q  23 ttggaaatagggagataggactaaaactgcnnnnnnn---catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagtta 119  Q
    |||||||||||||||||||||||||||||           |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||||||      
T  11971467 ttggaaatagggagataggactaaaactgtaaaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtag 11971368  T
Q  120 gtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||||  ||||| |||||| |||||||||||    
T  11971367 gtcaaaatggtaggaccaaaagtataattaagcct 11971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 27245612 - 27245748
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||| |||||||| |||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||    
T  27245612 tttctggagttggaaatagggagatatgactaaaattgcaaaata-catataatttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 27245710  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    |||||  ||||||||  | ||| |||||| ||||||||    
T  27245711 gagttgatcaaaatggtaagaccaaaagtataattaag 27245748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 28687731 - 28687593
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||| ||||||||||| ||||||        ||||| |||| | |||||| ||||||||||| || || ||  |||| ||||||    
T  28687731 tttctggagttggaaataggaagataggactagaactgcaaaaaaa-atatagtttaaggacgattttgttcgatttataaaagatagaaccattttcgt 28687633  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| |||||||||  | ||| |||||||||||||||||    
T  28687632 gagttggtcaaaatgatatgaccaaaagtgtaattaagcc 28687593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 39136772 - 39136684
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||||| |||||||||| ||||||  |  |||| ||||||||| | ||||||||| |||||  |||||||||||||||||||    
T  39136772 tttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaagccta 39136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 14311702 - 14311830
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| ||||||||||||       |||||| ||||   |||||| |||||||||||||| || || ||||| ||| ||||||| |    
T  14311702 agttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaagacgattttgttcgatttaaaaaagataggaccatttttgtgagttgg 14311800  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| ||  | ||| ||||||||||||||    
T  14311801 tcaaattggtacgacaaaaagtgtaattaa 14311830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 4477788 - 4477702
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||| |||||| | ||| ||||||||||||   ||||| |||||||| || |||||||||||||||  || ||||||||||||||    
T  4477788 tttagggacgattttattcaatttaaaagaggcgggaccattttcgtgaattggtcaaaatgtaaggatcaatagtgtaattaagcc 4477702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 45815427 - 45815343
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| ||| || |||||||||| ||||||| ||||||| ||||   || | ||||||||| |||||| ||||||||||||||||||    
T  45815427 tttagggacggttttgttcgatttgaaagaggcatgaccattttc---agctggtcaaaatgcaaggaccaaaagtgtaattaagcct 45815343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 39137000 - 39137080
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||||||||||||||||| | ||||| |||||||||   ||||||||   ||||  ||||||||||||||||||    
T  39137000 acgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagcct 39137080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 5184484 - 5184425
Alignment:
Q  97 ggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||| ||||||||||||||||| ||||||||  |||||| |||| ||||||||| |||||    
T  5184484 ggtaggaccaatttcgtgagttggtcaaaatccaaggaccaaaaatgtaattaaacctat 5184425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 34594628 - 34594585
Alignment:
Q  108 tttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    |||||||||||||||||||||  ||||| |||||||||||||||    
T  34594628 tttcgtgagttagtcaaaatgcgaggaccaaaagtgtaattaag 34594585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 40669689 - 40669751
Alignment:
Q  88 tttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||| | |||||| || ||||||||||| ||||||||| |||||  ||||||||||||||    
T  40669689 tttaaaaaaagtatgatcattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 40669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 49064187 - 49064268
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||||||||| ||||||  ||||||| ||||||||  | | |||||||| ||||  |||||| ||||||||||||    
T  49064187 acgattttgttcgatttgaaagagtcatgaccattttcgtgaactggccaaaatgtgaggatcaaaagtataattaagccta 49064268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 31073550 - 31073688
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||||| || ||| |||||||||||||||||||||||||||||||||    
T  31073550 tttctggagttggaaatagggagataggactaaaactgcacaaaa-catatagtttagggacaattttgttcgatttaaaagaggtatgaccaatttcgt 31073648  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||| | ||||||||| |||||| |||||||||||||||||    
T  31073649 gagctggtcaaaatgcaaggaccaaaagtgtaattaagcc 31073688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 31574133 - 31574272
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||| ||||||||||||       |||||| |||||| |||||| |||||||||||||||||||||||| ||||||||    
T  31574133 tttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtatgactaatttcgt 31574231  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  31574232 gagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 31574272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 5120884 - 5121017
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| ||  ||||||||||||| |    
T  5120884 agttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtaggaataatttcgtgagttgg 5120982  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||| |||||| |||||||||||||||||||    
T  5120983 tcaaaatgcaaggaccaaaagtgtaattaagccta 5121017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 25468976 - 25468847
Alignment:
Q  27 aaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaa 125  Q
    ||||||||||||||||||||||||||        |||||| |||||| |||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  25468976 aaatagggagataggactaaaactgcaagaaaaacatatagtttagggacgattttgttcgatttaaaagagatatgaccaatttcgtgagttggtcaaa 25468877  T
Q  126 atgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||||| |||||||||||||| ||||    
T  25468876 atgtaaggaccaaaagtgtaattaaaccta 25468847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 28636431 - 28636283
Alignment:
Q  12 catttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    ||||| || ||||||||||||||||||| ||||||||||||       |||||| ||||||||||||| |||||||||||||||| ||| ||||||||||    
T  28636431 catttatggagttggaaatagggagatatgactaaaactgcaaaaa--catatagtttaggaacgattttgttcgatttaaaagaagtaagaccaatttc 28636334  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatataaaa 162  Q
    ||||||| ||||||||  || ||| |||| |||||||||||| || |||||    
T  28636333 gtgagttggtcaaaatacaatgaccaaaaatgtaattaagccaatttaaaa 28636283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 29891218 - 29891074
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||||| | ||||| ||        |||||| |||||| ||| || |||||| |||||||||||||||| |||||||||    
T  29891218 tttctggagttggaaatagggagatagaattaaaattg-taaaaaacatatagtttagggacgcttttgttcggtttaaaagaggtatgatcaatttcgt 29891120  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatata 159  Q
     ||||||||||||||||||||  |||||||||||||||||||||||    
T  29891119 aagttagtcaaaatgtaaggaacaaaagtgtaattaagcctatata 29891074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 25472420 - 25472559
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| || |||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||    
T  25472420 tttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgt 25472519  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| |||||||||  ||||  |||||||||||||||||    
T  25472520 gagttggtcaaaatggtaggatcaaaagtgtaattaagcc 25472559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 5114606 - 5114467
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||    
T  5114606 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 5114508  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||  ||||||||  ||||  |||| |||||||||||||    
T  5114507 gagttgatcaaaatggtaggatcaaaaatgtaattaagcct 5114467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 32836456 - 32836542
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||| ||||| || |||||||||| ||||||| ||||||| ||||||||| | ||||||||| |||||| |||||||||||||||||    
T  32836456 tttaagaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaagcc 32836542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 30251099 - 30251240
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||| |||||||||| |       || ||| |||| | |||||| |||||||||||||| || |||||| | ||| ||    
T  30251099 tttctggagttggaaatagggagataagactaaaactacaaaaatacaaatagtttaaggacgattttgttcgatttaaaaaagatatgacaatttttgt 30251198  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||||||   ||||  |||||||||||||||||||    
T  30251199 gagttggtcaaaatagtaggatcaaaagtgtaattaagccta 30251240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 24640600 - 24640728
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| ||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| |||||||||||      
T  24640600 agttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttga 24640698  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||||  ||||| |||||| |||||||    
T  24640699 tcaaaatggtaggaccaaaagtataattaa 24640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 31073301 - 31073143
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttagg------aacgattctgttcgatttaaaa 94  Q
    |||||||||||| |||||| ||||||||||||| ||||| ||||||||||||        ||||| |||| |      ||||||| ||||||||||||||    
T  31073301 actaaaactgtcgtttctggagttggaaataggaagatatgactaaaactgcaaaaaataatatagtttaaggacttaaacgattttgttcgatttaaaa 31073202  T
Q  95 gaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
     || || ||||| |||| || ||| ||||||||  |||||| |||||||||||||||||    
T  31073201 aagataggaccattttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaagcc 31073143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 31573863 - 31573718
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgc---nnnnnnncatatactttaggaacgattctgttcgattt-aaaagaggtatgaccaatt 109  Q
    |||||| ||||||||||||||||||||||||||||||||          |||||| |||| |||||||| |||||||||| |||| |  || ||| | ||    
T  31573863 tttctggagttggaaatagggagataggactaaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcgatttaaaaaaaaataggactattt 31573764  T
Q  110 tcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||||||| |||||||||  ||||| |||||| ||||||||||||    
T  31573763 tcgtgagttggtcaaaatggtaggaccaaaagtataattaagccta 31573718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 29891488 - 29891526
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgc 52  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  29891488 tttctggagttggaaatagggagataggactaaaactgc 29891526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 30250772 - 30250722
Alignment:
Q  102 gaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    ||||||||||||||||| ||||||||| |||||| |||| |||||||||||    
T  30250772 gaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagc 30250722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 35163640 - 35163734
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| |||||| |||||| |||| ||||| ||||||| |  |||| ||||||||| | |||||||||   |||| ||||||||||||||||||    
T  35163640 catatagtttagggacgattttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagcct 35163734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 835466 - 835392
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||||| ||||||| | ||||| ||||||||| |  | ||||||| ||||| ||||||| |||||||||||    
T  835466 tgttcgatttgaaagaggcaagaccattttcgtgagctgctaaaaatgtgaggaccaaaagtgcaattaagccta 835392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 28636604 - 28636642
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgc 52  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  28636604 tttctggagttggaaatagggagataagactaaaactgc 28636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 28289822 - 28289683
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||||||||||||||||        |||||| |||||| |||||| |||||||||||||||||||||||| ||||||||    
T  28289822 tttctggagttggaaatagggagataggactaaaactg-gaaaaaacatataatttagggacgattttgttcgatttaaaagaggtatgactaatttcgt 28289724  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| ||||||||| |||||  ||||||||||||||||||    
T  28289723 gagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 28289683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 18150131 - 18150272
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||||| | |||| |||||||||||||||||||| ||||||||||||    
T  18150131 tttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggatgattttgttcgatttaaaagaggtaggaccaatttcgt 18150230  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||||||  |||||  | |||||||||||||||||    
T  18150231 gagtttgtcaaaatacaaggatcacaagtgtaattaagccta 18150272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 5161965 - 5162116
Alignment:
Q  3 taaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatg 102  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||| |||       |||||| |||||| |||||| ||||||||||||||||||||||    
T  5161965 taaaaccgtcatttctgaagttgtaaattgggagataggactaaaattgcaaaaaaacatataatttagggacgattttgttcgatttaaaagaggtatg 5162064  T
Q  103 accaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    || ||| || |||||| ||||||||| |||||  |||| |||||||||||||    
T  5162065 actaatctcatgagttggtcaaaatgcaaggataaaaaatgtaattaagcct 5162116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 32697679 - 32697771
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||| ||||||||||||||||    
T  32697679 catatagtttagggacgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaagc 32697771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 21371104 - 21371244
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||||||||||||| |||       |||||| |||||| |||||| |||| ||||||||||||||| |||||||||  |    
T  21371104 tttctggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttagggacgattttgtttgatttaaaagaggtaggaccaattttat 21371202  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||||||||| |||||  |||||||||||||||||||    
T  21371203 gagttggtcaaaatgcaaggatcaaaagtgtaattaagccta 21371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 4967184 - 4967319
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagtta 119  Q
    |||| |||||||||| ||||||||||||||||        |||||| |||||| |||||| |||||||||||||||||||| ||||| ||| |||||||     
T  4967184 agttagaaatagggatataggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaagaccatttttgtgagttg 4967283  T
Q  120 gtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||||| ||||| |||||||||||||||||||    
T  4967284 gtcaaaatgtgaggaccaaaagtgtaattaagccta 4967319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18149884 - 18149729
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggta 100  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || ||    
T  18149884 actaaaactgtcatttatggagttggaaatagggaaataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagata 18149786  T
Q  101 tgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctata 157  Q
     ||||| ||||||||||| ||| |||||  ||||  |||||||||||||||||||||    
T  18149785 ggaccattttcgtgagttggtccaaatggtaggatcaaaagtgtaattaagcctata 18149729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 28290052 - 28290195
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| ||||||||||||||  | || ||||| ||||||    
T  28290052 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaatgataggaccattttcgt 28290150  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatat 158  Q
    ||||| |||||||||  ||||| ||||||||||||||||||||||    
T  28290151 gagttggtcaaaatggtaggaccaaaagtgtaattaagcctatat 28290195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 38900775 - 38900648
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| || || ||||||||||| |    
T  38900775 agttggaaatagggagataggactaaaactgcaaaaaa-catataatttagggacgattttgttcgatttaaaagaggtaggatcattttcgtgagttgg 38900677  T
Q  121 tcaaaatgtaaggacgaaaagtgtaatta 149  Q
    ||||||||  ||||| |||||||||||||    
T  38900676 tcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 15115510 - 15115640
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||| |||| ||||||||||||        ||||| |||| | |||||| |||||||||||||||||||| ||||| ||||||||||| |    
T  15115510 agttggaaatagggcgatatgactaaaactgcaaaa----atatagtttaaggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttgg 15115605  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||||||| ||||  |||||||||||||||||||    
T  15115606 tcaaaatgtgaggatcaaaagtgtaattaagccta 15115640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 15029717 - 15029858
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||| ||||||||||||| | |||||||||||       |||||| |||| | |||||| |||||||||||||| ||||| ||||| ||||||    
T  15029717 tttctggagtttgaaatagggagatcgaactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaaggtaagaccattttcgt 15029815  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    ||||| |||||||||  ||||| ||||||||||||||||||||    
T  15029816 gagttggtcaaaatgggaggaccaaaagtgtaattaagcctat 15029858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 8419029 - 8419165
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||        ||||| |||| | |||||| ||||| |||||||| || || |||||  |||||    
T  8419029 tttctggagttggaaatagggagataggactaaaactgcaaaaaa--atatagtttaaggacgattttgttcaatttaaaaaagataggaccatattcgt 8419126  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    ||||| |||||||||  ||||| ||||||||||||||||    
T  8419127 gagttggtcaaaatggtaggaccaaaagtgtaattaagc 8419165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 14340864 - 14340953
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||| | |||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| || |||| |||||||||    
T  14340864 atatagtttatggacgattttgttcgatttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaa 14340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 153
Target Start/End: Original strand, 38901093 - 38901186
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||| |||| | |||||| ||||||||||||||  |||| ||||| |||||||  |||||||||||| |||||| |||||||||||||||||    
T  38901093 catatagtttaaggacgattttgttcgatttaaaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaagcc 38901186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 150
Target Start/End: Complemental strand, 4966955 - 4966819
Alignment:
Q  12 catttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||||  |||||||||||||| |||| ||||||||||||       |||||| |||||| |||||| |||||||||||||||||| |  || | ||||    
T  4966955 catttctagagttggaaataggg-gatatgactaaaactgctaaaaa-catatagtttagggacgattttgttcgatttaaaagaggcagtactattttc 4966858  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||| |||||||||  ||||| ||||||||||||||    
T  4966857 gtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 19291488 - 19291356
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||| ||||||| ||||||||||||       |||||| |||| | |||||| |||||||||||||| || || ||||| ||| |||||||      
T  19291488 agttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgtgagttgt 19291389  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||||   ||||| |||||||||||||||||    
T  19291388 tcaaaatagtaggaccaaaagtgtaattaagcc 19291356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 16752675 - 16752580
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||| | |||||| |||||||||| ||||| | |||| || ||||||||| | ||||||||| | |||| |||||||||||||||||||    
T  16752675 catatagtttatggacgattttgttcgatttgaaagaagcatgatcattttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaagccta 16752580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 28495305 - 28495380
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||||||| ||||||| ||||||| ||||||||| | |||||||| |   ||| ||||||||||||||||||||    
T  28495305 tgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatatggagaccaaaagtgtaattaagcctat 28495380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 10721865 - 10721787
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    |||||| |||||||||| ||||||  | ||||| ||||||||| | |||||||||| ||||| |||| |||||||||||    
T  10721865 acgattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaagc 10721787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 22651778 - 22651859
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||||||||| ||| ||| |  |||| ||||||||| | |||||||||  ||||| |||||||||||||||||||    
T  22651778 acgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagccta 22651859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 41834533 - 41834606
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||| | ||||||| | ||||| ||||||||| | |||||||||  ||||| ||||||||||||||||||    
T  41834533 tgttcgatctgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcct 41834606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 14340477 - 14340401
Alignment:
Q  74 acgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||||| |||||||||||||| || || ||||| |||||||||||  ||||||||  ||||| |||| |||||||||    
T  14340477 acgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 17260694 - 17260770
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctata 157  Q
    |||||||||| |||||||||  | || |||||||| || |||||||||  ||||| ||||||| |||||||||||||    
T  17260694 tgttcgatttgaaagaggtagaatcattttcgtgaattggtcaaaatgcgaggaccaaaagtgcaattaagcctata 17260770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 28494916 - 28494845
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    |||||||||| ||||||| |  |||| |||| |||  | |||||||||||||||| ||||||||||||||||    
T  28494916 tgttcgatttgaaagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaagtgtaattaagc 28494845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 21370832 - 21370798
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaa 48  Q
    |||||| ||||||||||||||||||||||||||||    
T  21370832 tttctggagttggaaatagggagataggactaaaa 21370798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 34555519 - 34555377
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcg 112  Q
    |||||| |||||||||||||||||||||||||||||||         |||||| |||||| |||||| ||||||||||||||||||||  ||||||||||    
T  34555519 tttctggagttggaaatagggagataggactaaaactgtaaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtagcaccaatttcg 34555420  T
Q  113 tgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
     ||||||||||||||| |||||| |||||||||||||||||||    
T  34555419 cgagttagtcaaaatgcaaggaccaaaagtgtaattaagccta 34555377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 10278687 - 10278550
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| |||| |||||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| || |||||||||    
T  10278687 tttctggagttgcaaatggggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgt 10278588  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||| ||||||||| |||||| |||||||||||||||    
T  10278587 gagttggtcaaaatgcaaggaccaaaagtgtaattaag 10278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 29439056 - 29438929
Alignment:
Q  27 aaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaa 126  Q
    |||||| |||||||||||||||||||       ||| || |||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  29439056 aaatagagagataggactaaaactgcaaaaaaacatttagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaa 29438957  T
Q  127 tgtaaggacgaaaagtgtaattaagcct 154  Q
    || |||||| ||||||||||||||||||    
T  29438956 tgcaaggaccaaaagtgtaattaagcct 29438929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 16298813 - 16298683
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||| ||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||| |    
T  16298813 agttggaaataggtagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgg 16298715  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    |||||||| |||| | |||| |||||||||||    
T  16298714 tcaaaatgcaagggccaaaaatgtaattaagc 16298683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 443968 - 444097
Alignment:
Q  23 ttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtc 122  Q
    ||||||||||||||||||||||||||||||       |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||    
T  443968 ttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaggaacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtc 444066  T
Q  123 aaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||| || ||  |||||| ||||||||||    
T  444067 aaaatgcaaagatcaaaagtataattaagcc 444097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 30786903 - 30786770
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaa-tttcgtgagtta 119  Q
    ||||||||||||||||||||||||||||||||       |||||| |||||| |||||| |||||||||||||||||||| |||||| |||||||||||     
T  30786903 agttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtaggaccaattttcgtgagttg 30786805  T
Q  120 gtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||||| ||| || ||||||||||||||||||    
T  30786804 gtcaaaatgcaagaaccaaaagtgtaattaagcct 30786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 1837643 - 1837502
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| ||||||||||||| ||||||||||||       |||||| |||||| || ||| ||||||||||||||||| ||||| |||||||||    
T  1837643 tttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatagtttagggacaattttgttcgatttaaaagagatatgatcaatttcgt 1837545  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||  |||||||| |||||| ||||||||||||||||||||    
T  1837544 gagttgatcaaaatgcaaggaccaaaagtgtaattaagcctat 1837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 17641772 - 17641912
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncata----tactttaggaacgattctgttcgatttaaaagaggtatgaccaatt 109  Q
    |||||| ||||||||||||||||||||||||||||||||        |||    || |||||| |||||| |||||||||||||||||||||||||| ||    
T  17641772 tttctggagttggaaatagggagataggactaaaactgcaaaaaaaaataaaaatagtttagggacgattttgttcgatttaaaagaggtatgaccattt 17641871  T
Q  110 tcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||||| |||||||||  ||||| ||||||||||||||    
T  17641872 tcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 44582188 - 44582059
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||| |  |||||||||||||||||||       |||||| |||||  |||||| |||||||||||||||||||| |||||||||||| |||| |    
T  44582188 agttggaaacaaagagataggactaaaactgcaaaaaa-catataatttagagacgattttgttcgatttaaaagaggtaggaccaatttcgttagttgg 44582090  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||||||||||||| |||||||||||||||    
T  44582089 tcaaaatgtaaggaccaaaagtgtaattaag 44582059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 39485202 - 39485063
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||||||||| ||||||| ||||||||||||||||||       |||||| |||||| |||||| |||||||||| ||||||||| ||||| ||||||    
T  39485202 tttctgaagttgaaaatagg-agataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgt 39485105  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||| |||||||||||  ||||| |||||||||||||| ||||    
T  39485104 gagctagtcaaaatgcgaggaccaaaagtgtaattaaaccta 39485063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 52335918 - 52336057
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||| ||||||||||||        ||||| |||||| |||||| |||||||||||||||||||| |||||||||| |    
T  52335918 tttctggagttggaaatagggagatatgactaaaactgcaaaaaaa-atatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcat 52336016  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||| |||||||||  || || ||||| ||||||||||||    
T  52336017 gagttggtcaaaatgatagaaccaaaagagtaattaagcct 52336057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 37421293 - 37421158
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagtta 119  Q
    ||||||||||||||| ||| ||||||||||||        |||||| |||||| |||||| |||||||||||||||||||| |||||||||||||| ||     
T  37421293 agttggaaatagggaaatatgactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaagaccaatttcgtgaattg 37421194  T
Q  120 gtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||||||| || ||| |||||||||||||| ||||    
T  37421193 gtcaaaatgcaaagaccaaaagtgtaattaaaccta 37421158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 2868116 - 2868254
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||| |||| ||||||||||||       |||||| | |||| |||||| |||||||||||||||||||| ||||| ||||||    
T  2868116 tttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtgtagggacgattttgttcgatttaaaagaggtaggaccattttcgt 2868214  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    | ||| |||||||||| ||||  |||||||||||||||||    
T  2868215 gtgttggtcaaaatgtgaggatcaaaagtgtaattaagcc 2868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 4080152 - 4080020
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||| |||||||||||        |||||| |||||| |||||| |||||||||||||| ||||| || |||||||||||||| |    
T  4080152 agttggaaatagggagatatgactaaaactg-taaaaaacatatagtttagggacgattttgttcgatttaaaataggtacgatcaatttcgtgagttgg 4080054  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||| ||| |||||| |||||||||||| |||||    
T  4080053 tcaagatgcaaggaccaaaagtgtaattgagcct 4080020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 151
Target Start/End: Complemental strand, 50304532 - 50304441
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    |||||| |||||  |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||  ||||| |||||||||||||||    
T  50304532 catatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 50304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 23340321 - 23340183
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||| ||||||| ||||||||||||        ||||| |||| || ||||| ||||||||||||||||| || ||||||||||||    
T  23340321 tttctggagttggaaataaggagatatgactaaaactgcaaaaaat-atatagtttatgagcgattttgttcgatttaaaagagataggaccaatttcgt 23340223  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| ||||||||| || ||  |||||||||||||||||    
T  23340222 gagttggtcaaaatgcaatgatcaaaagtgtaattaagcc 23340183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 34555788 - 34555931
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn-catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcg 112  Q
    |||||| ||||||||||||||||||| ||||||||||||        |||||| |||| | |||||| |||||||||||||| || || ||||| |||||    
T  34555788 tttctggagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcg 34555887  T
Q  113 tgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    |||||| |||||||||  ||||| ||||||||||||||| ||||    
T  34555888 tgagttggtcaaaatggtaggactaaaagtgtaattaagtctat 34555931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 37505209 - 37505066
Alignment:
Q  11 tcatttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaattt 110  Q
    |||||| || ||||| ||||||||| ||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || ||  |||| |||    
T  37505209 tcatttttggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagaaccatttt 37505110  T
Q  111 cgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||| |||||||||  ||||| ||||||||||||||||||    
T  37505109 cgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 37505066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 9992563 - 9992701
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||| |||||||||||||||||||| |||||       |||||| |||| | |||||| |||||||||||||| || || ||||| |||| |    
T  9992563 tttctggagttgaaaatagggagataggactaatactgcaaaaaa-catatagtttaagcacgattttgttcgatttaaaaaagataggaccattttcat 9992661  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| ||||||||| |||||| |||||||||||||||||    
T  9992662 gagtttgtcaaaatgcaaggaccaaaagtgtaattaagcc 9992701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 44954634 - 44954771
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | | |||| |||| ||||||||| |||||||| || |||| |    
T  44954634 tttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttatggatgattttgtttgatttaaaaaaggtatgatcattttcat 44954732  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    ||||| |||||||||  ||||| ||||||||||||||||    
T  44954733 gagttggtcaaaatgcgaggaccaaaagtgtaattaagc 44954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 8230049 - 8230190
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||| |||| ||||||||||||       |||||| |||||| |||||| ||||||||||||||||||||| |||| ||||||    
T  8230049 tttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtataaccattttcgt 8230147  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcctat 156  Q
    || |  |||||||||  || || |||| ||||||||| |||||    
T  8230148 gaataggtcaaaatgcgagaaccaaaaatgtaattaaacctat 8230190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 9992293 - 9992152
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||||||||||||||||||||||||       |||||| |||| | || ||| |||||||||||||| || || ||||| || |||    
T  9992293 tttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttaaggaccattttgttcgatttaaaaaagataggaccatttccgt 9992195  T
Q  114 gagttagtc-aaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| ||| ||||||  ||||| |||||||||||||||||||    
T  9992194 gagttggtcaaaaatggtaggaccaaaagtgtaattaagccta 9992152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 37505483 - 37505613
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||| ||||||||||||||||||||||||||       |||||| |||| | |||||| |||| | |||||||||| ||||| |||||||||||||| |    
T  37505483 agttgaaaatagggagataggactaaaactgcaaaaa--catatagtttatggacgattttgtttgttttaaaagagatatgatcaatttcgtgagttgg 37505580  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||||  |||||| |||| | ||||||||||    
T  37505581 tcaaaataaaaggaccaaaaatataattaagcc 37505613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 29021325 - 29021413
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||||| |||||||||| ||||||| |||| || ||||||||| | |||||||||| ||||| ||||||| |||||||||||    
T  29021325 tttagggacgattttgttcgatttgaaagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagccta 29021413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 44802631 - 44802719
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||||| |||||  ||| ||||||| ||||||| ||||||||| | ||||||||| |||||| |||||||||||||||||||    
T  44802631 tttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagccta 44802719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 8229778 - 8229635
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnn--catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttc 111  Q
    |||||| |||| |||||||||||||||||||||||||||         |||||| |||||  |||||| | |||||||||||||| |||  | || ||||    
T  8229778 tttctggagttagaaatagggagataggactaaaactgcaaaaaaaaacatatagtttagagacgattttattcgatttaaaagatgtagaatcattttc 8229679  T
Q  112 gtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||  ||||||||| ||||  |||||||||||||||||||    
T  8229678 gtgagttgatcaaaatgtgaggatcaaaagtgtaattaagccta 8229635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 21938694 - 21938566
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    ||||||||||||||||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || || || || |||||||||||      
T  21938694 agttggaaatagggagataggactaaaactgc-aaaaaacatatagtttatggacgattttgttcgatttaaaaaagataagatcattttcgtgagttga 21938596  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||||||  | ||| ||||||||||||||    
T  21938595 tcaaaatggtaagaccaaaagtgtaattaa 21938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 10278958 - 10279093
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||| ||| |||||||||||||||||||        |||||| |||| | |||||| |||||||||||||| || || ||||| ||||||    
T  10278958 tttctggagttggatatatggagataggactaaaactg----aaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 10279053  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    ||||| ||||||| |  ||||  |||||||||||||||||    
T  10279054 gagttggtcaaaacggtaggatcaaaagtgtaattaagcc 10279093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 45048248 - 45048158
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||||| |||| | |||||| ||||| ||||||||||||||  |||| |||||| |||| ||||||||| |||||| ||||||||||||||    
T  45048248 catatagtttatggacgattttgttcaatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 23526735 - 23526659
Alignment:
Q  76 gattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagc 152  Q
    |||| |||||||||||||||||| | ||||| ||||||||| | |||||||||| ||||| |||||||||| |||||    
T  23526735 gattttgttcgatttaaaagaggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaactaagc 23526659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 17088593 - 17088687
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||| |||||| ||| || |||| ||||| ||||||| ||||||| ||||||||| |  ||||||||  ||||| |||||||||||||||||||    
T  17088593 atatagtttagggacggttttgtttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaagccta 17088687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 44954364 - 44954229
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||| || |||||| ||||||||||||       |||||| ||||   |||||| |||| ||||||||| ||||||||||| ||||||    
T  44954364 tttctggagttggaaacagagagatacgactaaaactgcaaaaaa-catataatttaaagacgattttgttggatttaaaaaaggtatgaccattttcgt 44954266  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||||||||   |||| |||| |||||||||    
T  44954265 gagttggtcaaaatgggtggacaaaaaatgtaattaa 44954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 29439316 - 29439465
Alignment:
Q  1 actaaaactgtcatttctgaagttggaaatagggagataggactaaaactgc-nnnnnnncatatactttaggaacgattctgttcgatttaaaagaggt 99  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||| ||||        |||||| |||| | |||||| |||||||||||||| || |    
T  29439316 actaaaactgtcatttctggagtttgaaata-ggagataggactaaatctgcaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagat 29439414  T
Q  100 atgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    | || || |||||||||||  ||||||||   |||| ||||||| ||||||    
T  29439415 aggatcattttcgtgagttgatcaaaatggtgggaccaaaagtgcaattaa 29439465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 50926316 - 50926232
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    |||||| |||||| |||||||||| ||||||||||||  | ||||||||| | |||||||||  ||||| |||| ||||||||||    
T  50926316 tttagggacgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaag 50926232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 17641503 - 17641403
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| |||||||||||||||||||| ||||||||| |       | |||| |||| |||| ||| |||||||||||||| ||||||||||| ||||||    
T  17641503 tttctggagttggaaatagggagatagaactaaaactacaaaaaa-cgtatagtttaagaacaattttgttcgatttaaaaaaggtatgaccattttcgt 17641405  T
Q  114 ga 115  Q
    ||    
T  17641404 ga 17641403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 30787251 - 30787346
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||| |||| | |||||| |||||||||| ||| || |||||||| |||||||||||  || |||||  ||||  |||||||||||||||||||    
T  30787251 catatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaagccta 30787346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 2867983 - 2867913
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    ||||||||||||||||| ||||| || ||||||||||| |||||||||  | ||| |||| ||||||||||    
T  2867983 tgttcgatttaaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaag 2867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 45048609 - 45048683
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||||  ||||||||||||||| ||||||||  | |||||||||  ||||| |||||||||||||| ||||    
T  45048609 tgttcgattggaaagaggtatgaccattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaaaccta 45048683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 16299090 - 16299229
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||| ||||||||||| ||||||||||||||||||||       |||||| |||| | |||||| ||||| | |||||| |  || ||||| |||||     
T  16299090 tttctggagttggaaatatggagataggactaaaactgc-aaaaaacatatagtttaaggacgattttgttc-aattaaaaaaaataggaccattttcgc 16299187  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||  ||||||||  ||||| |||||| ||||||||||||    
T  16299188 gagttgatcaaaatggtaggacaaaaagtataattaagccta 16299229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 37421397 - 37421488
Alignment:
Q  60 catatactttaggaacgattctgttcgatttaaaagagg-tatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||||| |||| | |||||| |||||||||||||| | | || ||||| ||||||||||| |||||||||  | ||| ||||||||||||||    
T  37421397 catatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaattaa 37421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 44582479 - 44582603
Alignment:
Q  27 aaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaa 126  Q
    ||||||||||| | ||||||||||||       |||||| ||||   |||||| |||||||||| |||  | |||||||| |||||||||||  ||||||    
T  44582479 aaatagggagacaagactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgatttgaaaatgatatgaccattttcgtgagttgatcaaaa 44582578  T
Q  127 tgtaaggacgaaaagtgtaattaag 151  Q
    ||  || || |||||||||||||||    
T  44582579 tggtagaaccaaaagtgtaattaag 44582603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 50926701 - 50926792
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcctatat 158  Q
    |||||| ||| || |||||||||| ||||||    ||||| ||||||||| | |||||||||  | ||| ||||||||||||||||||||||    
T  50926701 tttagggacggttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaagcctatat 50926792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 1744465 - 1744427
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgc 52  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  1744465 tttctggagttggaaatagggagatatgactaaaactgc 1744427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 9833612 - 9833670
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaa 125  Q
    |||||| |||||| |||||||||| ||||||| ||||| | ||||||||||| ||||||    
T  9833612 tttagggacgattttgttcgatttgaaagaggcatgactattttcgtgagttggtcaaa 9833670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 39843498 - 39843571
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||||||| ||| ||| | ||||||||||||||||| ||| |||||  |||||  |||||||||| ||||||    
T  39843498 tgttcgatttgaaaaaggcaggaccaatttcgtgagttggtctaaatgcgaggaccgaaagtgtaataaagcct 39843571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 50305239 - 50305328
Alignment:
Q  61 atatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    ||||| |||| | |||||| |||||||||||||| || || ||||| |||| |||||| || ||||||  || || ||||||||||||||    
T  50305239 atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaa 50305328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 46396 - 46265
Alignment:
Q  23 ttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtc 122  Q
    ||||||||||||||||| ||||||||||||       |||||| |||||| | |||| ||||||||||||||||||||  |||| |||||| |||| |||    
T  46396 ttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggatgattttgttcgatttaaaagaggtagaaccattttcgtaagttggtc 46297  T
Q  123 aaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    ||||||  ||||| ||||||| ||||||||||    
T  46296 aaaatgcgaggaccaaaagtgcaattaagcct 46265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 46682 - 46816
Alignment:
Q  21 agttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttag 120  Q
    |||||||||||||| ||||| ||||||||| |       |||||| ||||   |||||| |||||||||||||| |  || ||||| ||||||||||| |    
T  46682 agttggaaatagggtgatagaactaaaactacaaaaaaacatatagtttaaagacgattttgttcgatttaaaatatataggaccattttcgtgagttgg 46781  T
Q  121 tcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    ||||||||  ||||| |||||||||||||||||||    
T  46782 tcaaaatggtaggaccaaaagtgtaattaagccta 46816  T

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Target: scaffold0712 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 6799 - 6939
Alignment:
Q  14 tttctgaagttggaaatagggagatagg----actaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatt 109  Q
    |||||| ||||| |||||||||||||||    |||||||||||       ||| || |||||| |||||| |||||||||||||||| ||| ||||||||    
T  6799 tttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcgatttaaaagatgtaagaccaatt 6898  T
Q  110 tcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||| | || ||||||||| |||||| ||||| ||||||||    
T  6899 tcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6939  T

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Target: scaffold0712; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 6530 - 6392
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||||||||||||||||| ||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || ||  |||| |||| |    
T  6530 tttctgaagttggaaataggaagataggactaaaactgc-aaaaaacatataatttaaggacgattttgttcgatttaaaaaagatagtaccattttcat 6432  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||  ||||||||  ||||| ||||||| |||||||||    
T  6431 gagttgatcaaaatggtaggaccaaaagtgcaattaagcc 6392  T

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Target: scaffold0709 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 6817 - 6957
Alignment:
Q  14 tttctgaagttggaaatagggagatagg----actaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatt 109  Q
    |||||| ||||| |||||||||||||||    |||||||||||       ||| || |||||| |||||| |||||||||||||||| ||| ||||||||    
T  6817 tttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcgatttaaaagatgtaagaccaatt 6916  T
Q  110 tcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaa 150  Q
    |||| | || ||||||||| |||||| ||||| ||||||||    
T  6917 tcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6957  T

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Target: scaffold0709; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 6548 - 6410
Alignment:
Q  14 tttctgaagttggaaatagggagataggactaaaactgcnnnnnnncatatactttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgt 113  Q
    |||||||||||||||||||| ||||||||||||||||||       |||||| |||| | |||||| |||||||||||||| || ||  |||| |||| |    
T  6548 tttctgaagttggaaataggaagataggactaaaactgc-aaaaaacatataatttaaggacgattttgttcgatttaaaaaagatagtaccattttcat 6450  T
Q  114 gagttagtcaaaatgtaaggacgaaaagtgtaattaagcc 153  Q
    |||||  ||||||||  ||||| ||||||| |||||||||    
T  6449 gagttgatcaaaatggtaggaccaaaagtgcaattaagcc 6410  T

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Target: scaffold0007 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 205827 - 205911
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaag 151  Q
    |||||| ||| || |||||||||| ||||||| | ||||| ||||||||||| |||||||||| ||||| |||||||||||||||    
T  205827 tttagggacggttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

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Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 210797 - 210884
Alignment:
Q  67 tttaggaacgattctgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagcct 154  Q
    |||||| ||| || |||||||||| ||||||| | ||||| |||| |||||| |||||||||| ||||| ||||||||||||||||||    
T  210797 tttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagcct 210884  T

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Target: scaffold1432 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 539 - 613
Alignment:
Q  81 tgttcgatttaaaagaggtatgaccaatttcgtgagttagtcaaaatgtaaggacgaaaagtgtaattaagccta 155  Q
    |||||||||| ||||||| | ||||| ||||||||| | |||||||||  ||||  |||||||||||||||||||    
T  539 tgttcgatttgaaagaggcaagaccattttcgtgagctcgtcaaaatgcgaggatcaaaagtgtaattaagccta 613  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 78457 - 78417
Alignment:
Q  12 catttctgaagttggaaatagggagataggactaaaactgc 52  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  78457 catttctggagttggaaatagagagataggactaaaactgc 78417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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