View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18591_high_1 (Length: 907)

Name: NF18591_high_1
Description: NF18591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18591_high_1
NF18591_high_1
[»] scaffold0140 (1 HSPs)
scaffold0140 (6-868)||(33579-34442)
[»] chr8 (20 HSPs)
chr8 (323-397)||(6849255-6849329)
chr8 (328-397)||(44380613-44380682)
chr8 (332-400)||(12697716-12697784)
chr8 (338-397)||(36497664-36497723)
chr8 (323-397)||(6004947-6005021)
chr8 (323-397)||(12045647-12045721)
chr8 (332-397)||(9985681-9985746)
chr8 (342-397)||(14531624-14531679)
chr8 (323-385)||(30578269-30578331)
chr8 (335-397)||(35500959-35501021)
chr8 (335-397)||(40380284-40380346)
chr8 (328-390)||(40464966-40465028)
chr8 (332-397)||(6161951-6162016)
chr8 (335-400)||(14228707-14228772)
chr8 (332-397)||(21648934-21648999)
chr8 (328-397)||(27630900-27630969)
chr8 (356-397)||(31731450-31731491)
chr8 (329-390)||(33415711-33415772)
chr8 (328-397)||(37562140-37562209)
chr8 (332-397)||(42012593-42012658)
[»] chr5 (28 HSPs)
chr5 (323-397)||(29803228-29803302)
chr5 (328-402)||(41460114-41460188)
chr5 (329-397)||(17063868-17063936)
chr5 (323-397)||(7144580-7144654)
chr5 (331-385)||(38690968-38691022)
chr5 (328-397)||(26627333-26627402)
chr5 (323-402)||(15639383-15639462)
chr5 (328-378)||(3960168-3960218)
chr5 (332-402)||(12718383-12718453)
chr5 (328-397)||(582866-582935)
chr5 (328-397)||(5996670-5996739)
chr5 (328-385)||(19437272-19437329)
chr5 (325-397)||(16292245-16292316)
chr5 (335-390)||(32379935-32379990)
chr5 (332-402)||(12779609-12779679)
chr5 (335-397)||(14914375-14914437)
chr5 (323-397)||(20040792-20040865)
chr5 (323-397)||(34428163-34428237)
chr5 (332-397)||(1107984-1108049)
chr5 (328-397)||(2456029-2456098)
chr5 (335-396)||(3154649-3154710)
chr5 (332-397)||(6538873-6538938)
chr5 (332-397)||(8897385-8897450)
chr5 (328-397)||(18638824-18638893)
chr5 (328-397)||(31025004-31025073)
chr5 (328-397)||(34400621-34400690)
chr5 (332-397)||(36572694-36572759)
chr5 (329-370)||(39032821-39032862)
[»] chr4 (32 HSPs)
chr4 (323-397)||(44272804-44272878)
chr4 (329-397)||(11012144-11012212)
chr4 (329-397)||(42853942-42854010)
chr4 (329-402)||(23220333-23220406)
chr4 (335-397)||(3475872-3475934)
chr4 (323-397)||(18874916-18874989)
chr4 (323-397)||(23094379-23094453)
chr4 (331-397)||(35017156-35017222)
chr4 (343-397)||(47014942-47014996)
chr4 (323-397)||(54801001-54801075)
chr4 (329-390)||(8455871-8455932)
chr4 (332-397)||(41609682-41609747)
chr4 (332-397)||(51039119-51039184)
chr4 (354-402)||(12074470-12074518)
chr4 (332-396)||(37775430-37775494)
chr4 (321-397)||(46566932-46567008)
chr4 (335-402)||(925068-925135)
chr4 (361-400)||(52430877-52430916)
chr4 (328-402)||(14090049-14090123)
chr4 (332-402)||(25523201-25523271)
chr4 (336-390)||(25936250-25936304)
chr4 (328-402)||(34114116-34114190)
chr4 (363-397)||(45764422-45764456)
chr4 (332-401)||(51908577-51908647)
chr4 (332-397)||(12241061-12241126)
chr4 (334-399)||(12694433-12694498)
chr4 (329-402)||(18568815-18568888)
chr4 (328-385)||(18880800-18880857)
chr4 (332-397)||(22071499-22071564)
chr4 (331-372)||(24337358-24337399)
chr4 (332-397)||(33820339-33820404)
chr4 (328-397)||(46912798-46912867)
[»] chr3 (30 HSPs)
chr3 (328-402)||(37134605-37134679)
chr3 (323-397)||(45150260-45150334)
chr3 (323-397)||(7867705-7867779)
chr3 (323-397)||(36869831-36869905)
chr3 (328-397)||(36799401-36799470)
chr3 (321-377)||(40785691-40785747)
chr3 (335-402)||(50280093-50280160)
chr3 (323-397)||(1295335-1295409)
chr3 (323-397)||(1901920-1901994)
chr3 (323-397)||(1911366-1911440)
chr3 (331-397)||(28300650-28300716)
chr3 (328-397)||(462400-462469)
chr3 (328-397)||(12094388-12094457)
chr3 (331-402)||(14957834-14957905)
chr3 (323-402)||(50294106-50294185)
chr3 (323-397)||(275229-275303)
chr3 (323-397)||(41717266-41717340)
chr3 (323-397)||(45528936-45529010)
chr3 (332-402)||(51464275-51464345)
chr3 (328-397)||(7213-7282)
chr3 (329-390)||(622460-622521)
chr3 (329-390)||(32981121-32981182)
chr3 (328-385)||(35425671-35425728)
chr3 (328-377)||(42102260-42102309)
chr3 (329-378)||(43333670-43333719)
chr3 (328-397)||(43900756-43900825)
chr3 (332-397)||(47988488-47988553)
chr3 (332-397)||(47997775-47997840)
chr3 (332-397)||(48007062-48007127)
chr3 (328-397)||(52678576-52678645)
[»] chr1 (36 HSPs)
chr1 (328-402)||(20268512-20268586)
chr1 (329-397)||(30530574-30530642)
chr1 (323-397)||(40238441-40238515)
chr1 (323-396)||(5043096-5043169)
chr1 (328-397)||(23554754-23554823)
chr1 (329-397)||(31184284-31184352)
chr1 (323-403)||(32821632-32821712)
chr1 (329-397)||(34395919-34395987)
chr1 (329-389)||(47138030-47138090)
chr1 (329-397)||(50118896-50118964)
chr1 (323-397)||(9882653-9882727)
chr1 (323-397)||(25702209-25702283)
chr1 (323-397)||(30687055-30687129)
chr1 (332-402)||(31703481-31703551)
chr1 (328-397)||(43640984-43641051)
chr1 (328-397)||(7078499-7078568)
chr1 (328-397)||(30530398-30530467)
chr1 (328-372)||(44950420-44950464)
chr1 (328-400)||(48576504-48576576)
chr1 (329-401)||(52417530-52417602)
chr1 (329-384)||(18954300-18954355)
chr1 (323-378)||(51168762-51168817)
chr1 (335-397)||(18610776-18610838)
chr1 (323-377)||(21255779-21255833)
chr1 (332-370)||(24158680-24158718)
chr1 (323-397)||(25988978-25989052)
chr1 (323-397)||(27352633-27352707)
chr1 (331-397)||(33675903-33675969)
chr1 (323-372)||(6954310-6954359)
chr1 (328-397)||(11097883-11097952)
chr1 (332-397)||(18541054-18541119)
chr1 (328-397)||(26547237-26547306)
chr1 (332-397)||(30439253-30439318)
chr1 (321-378)||(34941912-34941969)
chr1 (323-400)||(36930748-36930824)
chr1 (328-397)||(49596238-49596307)
[»] chr7 (29 HSPs)
chr7 (328-397)||(37392046-37392115)
chr7 (323-404)||(26123362-26123444)
chr7 (321-397)||(4971293-4971369)
chr7 (329-402)||(40760770-40760841)
chr7 (328-397)||(22692087-22692156)
chr7 (329-402)||(28109955-28110028)
chr7 (323-400)||(34304672-34304749)
chr7 (328-397)||(45154539-45154607)
chr7 (329-397)||(40693528-40693596)
chr7 (323-378)||(44187713-44187768)
chr7 (323-397)||(8061738-8061812)
chr7 (332-402)||(42640841-42640911)
chr7 (328-397)||(26153649-26153717)
chr7 (328-397)||(44564722-44564790)
chr7 (328-396)||(5724042-5724110)
chr7 (328-400)||(5868301-5868373)
chr7 (329-373)||(43107637-43107681)
chr7 (331-378)||(5978601-5978648)
chr7 (323-401)||(18925991-18926067)
chr7 (331-397)||(28824506-28824572)
chr7 (332-397)||(30769664-30769727)
chr7 (335-397)||(37385239-37385301)
chr7 (328-378)||(46148188-46148238)
chr7 (343-397)||(47530305-47530359)
chr7 (328-397)||(16567319-16567388)
chr7 (328-397)||(16598274-16598343)
chr7 (328-397)||(17500700-17500769)
chr7 (328-397)||(17552445-17552514)
chr7 (332-397)||(19426583-19426648)
[»] chr6 (11 HSPs)
chr6 (329-397)||(12044335-12044403)
chr6 (323-397)||(9188938-9189012)
chr6 (323-397)||(32729892-32729966)
chr6 (323-390)||(30744247-30744314)
chr6 (332-384)||(14803376-14803428)
chr6 (321-397)||(20712070-20712145)
chr6 (334-397)||(35077126-35077190)
chr6 (335-397)||(6435039-6435101)
chr6 (335-397)||(29376721-29376783)
chr6 (328-397)||(11785358-11785427)
chr6 (332-397)||(21506339-21506404)
[»] chr2 (23 HSPs)
chr2 (323-397)||(1052490-1052564)
chr2 (332-397)||(9202519-9202584)
chr2 (332-397)||(36816419-36816484)
chr2 (323-378)||(6742404-6742459)
chr2 (331-397)||(14713989-14714055)
chr2 (323-397)||(23358573-23358647)
chr2 (323-397)||(30856810-30856884)
chr2 (323-397)||(36763518-36763591)
chr2 (342-396)||(43621961-43622015)
chr2 (352-397)||(3299128-3299173)
chr2 (329-397)||(546385-546453)
chr2 (329-397)||(7497991-7498059)
chr2 (328-400)||(35965575-35965647)
chr2 (323-397)||(8352838-8352912)
chr2 (328-378)||(14954598-14954648)
chr2 (323-397)||(15283244-15283318)
chr2 (328-402)||(28165127-28165201)
chr2 (332-385)||(39147780-39147834)
chr2 (328-397)||(2308321-2308390)
chr2 (328-397)||(3959897-3959966)
chr2 (332-397)||(6746220-6746285)
chr2 (355-404)||(22303199-22303248)
chr2 (328-397)||(42554779-42554848)
[»] scaffold0024 (1 HSPs)
scaffold0024 (328-397)||(60472-60541)
[»] scaffold0002 (1 HSPs)
scaffold0002 (323-397)||(440721-440795)
[»] scaffold0662 (1 HSPs)
scaffold0662 (343-397)||(1081-1135)
[»] scaffold0003 (1 HSPs)
scaffold0003 (323-397)||(337121-337195)
[»] scaffold0252 (1 HSPs)
scaffold0252 (355-399)||(8001-8045)
[»] scaffold0041 (1 HSPs)
scaffold0041 (331-397)||(34411-34477)
[»] scaffold0020 (1 HSPs)
scaffold0020 (328-402)||(155904-155978)
[»] scaffold0154 (1 HSPs)
scaffold0154 (328-397)||(4318-4387)


Alignment Details
Target: scaffold0140 (Bit Score: 691; Significance: 0; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 691; E-Value: 0
Query Start/End: Original strand, 6 - 868
Target Start/End: Original strand, 33579 - 34442
Alignment:
Q  6 gacatcatcaaatgacatcacgggccctttctatccaaaaaagacatcacgggcccttgtcaaattagaaataaataaatcaaattacagacttacagca 105  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33579 gacatcatcaaatgacatcacgggccctttctatccaaaaa-gacatcacgggcccttgtcaaattagaaataaataaatcaaattacagacttacagca 33677  T
Q  106 gcatgtgnnnnnnnctaaccaaaagttataacatgtgttaaacattaacacttgtcttcaaatggagaaaggaagttatatgggtggtatttcctaagag 205  Q
    |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33678 gcatgtgtttttttctaaccaaaagttataacatgtgttaaacattaacacttgtcttcaaatggagaaaggaagttagatgggtggtatttcctaagag 33777  T
Q  206 aatagagatttgagtaatgatagtatttgtttaatgttttgtgataactttttaggcaaccttcnnnnnnnnnnnncttatggttaaaaacaa-ttgatt 304  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||            ||||||||||||||||| ||||||    
T  33778 aatagagatttgagtaatgatagtatttgttgaatgttttgtgataactttttacgcaaccttcttttttctttttcttatggttaaaaacaagttgatt 33877  T
Q  305 gaggnnnnnnnnnggta-tagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaag 403  Q
    |||          |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33878 gag--aaaaaaaaggtaatagtaggattataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttctag 33975  T
Q  404 agatttagcaaaccatttctctatgtcaaaaattgaagaggtggttacgtagtgtggtggtaacaaacatccggcatcatgataggatcaattttgcttt 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33976 agatttagcaaaccatttctctatgtcaaaaattgaagaggtggttacgtagtgtggtggtaacaaacatccggcatcatgataggatcaattttgcttt 34075  T
Q  504 tgtgaagttctttaggcacattttggaaggagaggctagattcatgtttgatcaatgtcgctgtaatgctactttaccaaacaattttatctcctacttt 603  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34076 tgtgaagttctttaggcacattttggaaggagaggctagattcatgtttgatcaatgtcgctgtaatgctactttaccaaacaattttatctcctacttt 34175  T
Q  604 gttaggttgatgttgaaggtggcctccccattttcatggacgaattttcagccgatatctcttcttgtttgtttatacaaattaatatcaacaatgttag 703  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  34176 gttaggttgatgttgaaggtggcctccccattttcattgacgaattttcagccgatatctcttcttgtttgtttatacagattaatatcaacaatgttaa 34275  T
Q  704 cagcgagattagctcgggttatgaatatggtggttgctaccactcaattgacttttatcaatggaagaaatttagttgatgggggcg-atggtggtctat 802  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34276 cagcgagattagctcgggttatgaatatggtggttgctaccattcaattgacttttatcaatggaagaaatttagttgatgggggcgaatggtggtctat 34375  T
Q  803 gagattattgaaatgacaaagaaaac-atgttagaaatatttagtctataaaatagattttgaaaag 868  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||    
T  34376 gagattattgaaatgacaaagaaaacaatgttagaaatatttagtcaataaagtagattttgaaaag 34442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 1e-19; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 6849255 - 6849329
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  6849255 agtaagaatataatgtgagtatgaaagataaagttgtctaaaagttgtcacaaaatggttgtataaatatcattt 6849329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 44380613 - 44380682
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||||||||||||| ||||||| ||||| |||||| |||| ||||||    
T  44380613 gaatataatgtgagtatgagagagaaagttgtttaaaggttgtcacaaaatggttgtacaaatatcattt 44380682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 400
Target Start/End: Original strand, 12697716 - 12697784
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 400  Q
    ||||||||| | ||| ||| ||||||||| |||| || ||||||||||||||||||||| |||||||||    
T  12697716 ataatgtgagtgtgagagagaaagttgttcaaaaattatcataaaatagttgtataaatatcatttttc 12697784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 36497723 - 36497664
Alignment:
Q  338 tgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||| |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  36497723 tgaatatgagagagaaagttgtctaaaagttgtcacaaaatagttgtacaaatatcattt 36497664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 6005021 - 6004947
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||| |||||| ||| |||||||| |||| ||||||    
T  6005021 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtagttgtacaaatatcattt 6004947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 12045647 - 12045721
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| |||| ||||||    
T  12045647 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaatatcattt 12045721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 9985681 - 9985746
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||| || ||||| |||||||||||||||||||| |||| |||| ||||||    
T  9985681 ataatgtgagtatgagagagaatgttgtataaaagttgtcataaaatagatgtacaaatatcattt 9985746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 14531679 - 14531624
Alignment:
Q  342 tatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||||||  ||||||| |||||||||||||||| |||| ||||||    
T  14531679 tatgaaagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcattt 14531624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 30578331 - 30578269
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 385  Q
    |||| |||||||| |||| ||||| | | ||||||||||||||||||||| ||||| ||||||    
T  30578331 agtaagaatataacgtgagtatgagaaagaaagttgtttaaaagttgtcaaaaaatggttgta 30578269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 35500959 - 35501021
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||| |||||||||||||  |||||||||| ||| | ||||||||||| ||||||    
T  35500959 atgtgagtatgagagataaagttgttataaagttgtcaaaaagtggttgtataaatatcattt 35501021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 40380346 - 40380284
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||| ||| ||||||||  ||||||||||||||||||| |||| |||| ||||||    
T  40380346 atgtgagtatgagagagaaagttgtacaaaagttgtcataaaatagatgtacaaatatcattt 40380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 40465028 - 40464966
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 390  Q
    ||||||||||||| ||||| ||| ||||||||  |||| || ||||||| |||||||||||||    
T  40465028 gaatataatgtgagtatgagagagaaagttgtcaaaaatttatcataaagtagttgtataaat 40464966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 6162016 - 6161951
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||||||| | ||||||  ||| ||||||||||||| |||||| |||| ||||||    
T  6162016 ataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatggttgtacaaatatcattt 6161951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 400
Target Start/End: Complemental strand, 14228772 - 14228707
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 400  Q
    |||||| ||||| ||| ||||||||  ||||||| ||| |||||||||||| |||| |||||||||    
T  14228772 atgtgagtatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttttc 14228707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 21648934 - 21648999
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||| ||||||||| ||||||||||| ||| | |||||| |||| ||||||    
T  21648934 ataatgtgagtatgagagagaaagttgttaaaaagttgtcacaaattggttgtacaaatatcattt 21648999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 27630969 - 27630900
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||||||||  |||| |||||||||||| | |||| |||| ||||||    
T  27630969 gaatataatgtgagtatgagagagaaagttgtcaaaaaattgtcataaaatggatgtacaaatatcattt 27630900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 31731450 - 31731491
Alignment:
Q  356 ttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| |||||||||||||| ||||||||||||| ||||||    
T  31731450 ttgtttcaaagttgtcataaattagttgtataaatatcattt 31731491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 33415711 - 33415772
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 390  Q
    |||||||||||| ||| ||||| | ||||||  || ||||||||||||||||||||| ||||    
T  33415711 aatataatgtgagtataaaagagagagttgtcaaagagttgtcataaaatagttgtacaaat 33415772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 37562140 - 37562209
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||| || ||||| ||| |||||||| |||||||||||| | |||||||||| |||| ||||||    
T  37562140 gaatatcatgcgagtatgagagagaaagttgtctaaaagttgtcacataatagttgtacaaatatcattt 37562209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 42012593 - 42012658
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| |||| ||||| ||| ||||||||  ||||||| ||||||| ||||||||||||| ||||||    
T  42012593 ataacgtgagtatgagagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcattt 42012658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 1e-19; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 29803302 - 29803228
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  29803302 agtaagaatataatgtgaatatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcattt 29803228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 41460188 - 41460114
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||  |||||||||| |||||| ||||    
T  41460188 gaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtataaatatcatttctcaa 41460114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 17063936 - 17063868
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||||  ||||| |||| ||||||    
T  17063936 aatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtacaaatatcattt 17063868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 7144654 - 7144580
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||| ||| ||||| ||| ||||||||||||||||| ||||||||| |||||| |||| ||||||    
T  7144654 agtaagaatataatatgagtatgagagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcattt 7144580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 38690968 - 38691022
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 385  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||| |||||    
T  38690968 tataatgtgaatatgaaagagaaagttgtttaaaaattgtcacaaaataattgta 38691022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 26627402 - 26627333
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||||||| |||||||| |||||||||  | |||||||||||| |||| ||||||    
T  26627402 gaatataatgtgagtatgaaagagaaagttgtctaaaagttgataaaaaatagttgtacaaatatcattt 26627333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 15639462 - 15639383
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| |||| |||||| ||||    
T  15639462 agtaagaatataatgtgagtatgagagaaaaagttgtctaaaagttgtcaccaaatggttgtacaaatatcatttctcaa 15639383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 3960168 - 3960218
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 378  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||| |||||    
T  3960168 gaatataatgtgagtatgagatataaagttgtttaaaagttgtcaaaaaat 3960218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 12718383 - 12718453
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||||||||| ||||||||||||  ||||||||||| ||| | |||||| |||| |||||| ||||    
T  12718383 ataatgtgaatatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctcaa 12718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 582866 - 582935
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||| ||||| ||| ||| ||||||||||||| ||| |||||||||||| |||| ||||||    
T  582866 gaatataatatgagtatgagagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcattt 582935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 5996739 - 5996670
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||||||| ||| ||| |||| ||||| |||| | |||||||||||| |||| ||||||    
T  5996739 gaatataatgtgaatatgagagagaaaattgtctaaaaattgttaaaaaatagttgtacaaatatcattt 5996670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 19437329 - 19437272
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 385  Q
    ||||||||||||||||||| ||| ||||||||||||| ||| ||| ||||| ||||||    
T  19437329 gaatataatgtgaatatgagagagaaagttgtttaaaggttatcacaaaatggttgta 19437272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 16292245 - 16292316
Alignment:
Q  325 taggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||||| | ||||||||| ||||||||| ||||||| |||| ||||| ||||| |||| ||||||    
T  16292245 taggaatataatgtaagtatgaaagagaaagttgttaaaaagttatcat-aaataattgtacaaatatcattt 16292316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 390
Target Start/End: Original strand, 32379935 - 32379990
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 390  Q
    |||||| ||||| ||| ||||||||| ||||||||||||||| |||||||| ||||    
T  32379935 atgtgagtatgagagagaaagttgttcaaaagttgtcataaactagttgtacaaat 32379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 12779609 - 12779679
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| ||| | |||||| |||| |||||| ||||    
T  12779609 ataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctcaa 12779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 14914437 - 14914375
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||| |||| ||||||||  ||||||||||| ||||| |||||| |||| ||||||    
T  14914437 atgtgaatatgtaagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcattt 14914375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 20040865 - 20040792
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||||| | |||||||| ||||||||||||  |||| |||||| |||| ||||||    
T  20040865 agtaagaatataatgtgagtatgaaaaagaaagttgtgtaaaagttgtcactaaat-gttgtacaaatatcattt 20040792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 34428237 - 34428163
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| |||| |||||||| ||| | | | |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  34428237 agtaagaatctaatgtgagtataagaaaaaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 34428163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 1108049 - 1107984
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||||||||||||  ||||||||| | |||||||| ||| |||| ||||||    
T  1108049 ataatgtgagtatgagagataaagttgtacaaaagttgtaacaaaatagtcgtacaaatatcattt 1107984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 2456098 - 2456029
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| | | ||||||||  |||| |||| |||||||||||||||| || ||||||    
T  2456098 gaatataatgtgagtatgagatagaaagttgtcaaaaaattgttataaaatagttgtatagatatcattt 2456029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 396
Target Start/End: Original strand, 3154649 - 3154710
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 396  Q
    |||||| ||||| ||| ||||||||  ||||||| |||||||||||||||| |||| |||||    
T  3154649 atgtgattatgagagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatt 3154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 6538938 - 6538873
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||||||| ||||||||  |||| || ||| |||||| ||||| |||| ||||||    
T  6538938 ataatgtgaatatgaaagagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcattt 6538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 8897450 - 8897385
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||||||| | ||||||  ||| ||||||||||||| |||||| |||| ||||||    
T  8897450 ataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatggttgtacaaatatcattt 8897385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 18638824 - 18638893
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||||||| ||||  ||||||||| ||||||| |||||  |||| ||||||    
T  18638824 gaatataatgtgagtatgagagataaatttgtcaaaaagttgtaataaaatggttgtgcaaatatcattt 18638893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 31025004 - 31025073
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||||||||| |||| |||||||||  | |||||| |||| ||||||    
T  31025004 gaatataatgtgagtatgagagagaaagttgttaaaaaattgtcataatgtggttgtacaaatatcattt 31025073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 34400690 - 34400621
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| || |||||| |||| ||||||||||||  ||||| |||| ||||||    
T  34400690 gaatataatgtgagtatgagagagaaggttgttaaaaaattgtcataaaatgattgtacaaatatcattt 34400621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 36572759 - 36572694
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||||||| | ||||||  ||||||||||| ||||||||| || |||| ||||||    
T  36572759 ataatgtgagtatgaaagagagagttgtcaaaaagttgtcacaaaatagttatacaaatatcattt 36572694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 39032821 - 39032862
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgt 370  Q
    |||||||| ||| ||||||| |||||||||||||||||||||    
T  39032821 aatataatatgagtatgaaaaataaagttgtttaaaagttgt 39032862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 44272804 - 44272878
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  44272804 agtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcattt 44272878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 11012212 - 11012144
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||| | ||||| ||||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  11012212 aatataatgtaagtatgagagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcattt 11012144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 42854010 - 42853942
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||| ||||| ||| |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  42854010 aatataatgtgagtatgatagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 42853942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 402
Target Start/End: Complemental strand, 23220406 - 23220333
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||||||||||| ||| | |||||||||| |||||||||||||| ||||| |||||| |||| |||||| ||||    
T  23220406 aatataatgtgagtataagagataaagttatttaaaagttgtcaaaaaatggttgtacaaatatcatttctcaa 23220333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 3475934 - 3475872
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||| ||| ||||||||  ||||||||||||||||| |||||| |||| ||||||    
T  3475934 atgtgaatatgagagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcattt 3475872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 18874916 - 18874989
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  18874916 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaat-gttgtacaaatatcattt 18874989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 23094453 - 23094379
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||| ||||||||||| |||||||| |||||||| ||| |||||  ||||| |||| ||||||    
T  23094453 agtaagaatataatgtaaatatgaaagagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcattt 23094379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 35017222 - 35017156
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||| | ||||| ||||||||||||  ||||||||||| |||||||||||| |||| ||||||    
T  35017222 tataatgttagtatgagagataaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcattt 35017156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 47014996 - 47014942
Alignment:
Q  343 atgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  47014996 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcattt 47014942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 54801075 - 54801001
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||||||||||| |||| |||||||| ||| ||| | |||||| |||| ||||||    
T  54801075 agtaagaatataatgtgagtatgaaagataaaattgtctaaaagttatcacaaagtggttgtacaaatatcattt 54801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 8455932 - 8455871
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 390  Q
    |||||||||||| ||| | ||| ||||||||| ||||||||||| |||||||||||| ||||    
T  8455932 aatataatgtgagtattagagagaaagttgttcaaaagttgtcacaaaatagttgtacaaat 8455871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 41609682 - 41609747
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||||||||||||  ||||||||||||||||| | |||| |||| ||||||    
T  41609682 ataatgtgagtatgagagataaagttgtacaaaagttgtcataaaatggatgtacaaatatcattt 41609747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 51039119 - 51039184
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| ||| |||||||| |||| ||||||    
T  51039119 ataatgtgattatgagagataaagttgtcaaaaagttgtcacaaagtagttgtacaaatatcattt 51039184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 12074518 - 12074470
Alignment:
Q  354 agttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||| |||| || ||||||||||||||||||||| |||||||||||    
T  12074518 agttgttcaaaaattatcataaaatagttgtataaatatcatttttcaa 12074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 37775430 - 37775494
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 396  Q
    ||||||||  ||||||||| ||||||||  ||||||||| |||||||||||||| |||| |||||    
T  37775430 ataatgtgtgtatgaaagagaaagttgtacaaaagttgtaataaaatagttgtagaaatatcatt 37775494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 46567008 - 46566932
Alignment:
Q  321 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | | |||| |||| ||||||    
T  46567008 atagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggatgtacaaatatcattt 46566932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 925068 - 925135
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||||| ||||| ||| ||| |||| |||||||||||| ||||| ||||||||||| |||||| ||||    
T  925068 atgtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtataaatatcatttatcaa 925135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 400
Target Start/End: Complemental strand, 52430916 - 52430877
Alignment:
Q  361 taaaagttgtcataaaatagttgtataaatgtcatttttc 400  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  52430916 taaaagttgtcataaaatagttgtacaaatatcatttttc 52430877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 14090049 - 14090123
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||| |||||||| ||||| ||| |||||||||||||||||||   ||||| |||| |||||| |||||| ||||    
T  14090049 gaatctaatgtgagtatgagagagaaagttgtttaaaagttgtacaaaaatggttggataaatatcatttctcaa 14090123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 25523201 - 25523271
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| |||||| ||||    
T  25523201 ataatgtgagtatgagagagaaagttgtcaaaaagttgtgagaaaatagttgtacaaatatcatttctcaa 25523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 336 - 390
Target Start/End: Complemental strand, 25936304 - 25936250
Alignment:
Q  336 tgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 390  Q
    ||||| ||||| ||| ||||||||  ||||||||||| |||||||||||||||||    
T  25936304 tgtgagtatgagagagaaagttgtgcaaaagttgtcaaaaaatagttgtataaat 25936250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 34114116 - 34114190
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||||||| |||| ||||| ||| ||||||||  ||||||| | |||||||||||||| |||| |||||| ||||    
T  34114116 gaatataacgtgagtatgagagaaaaagttgtcaaaaagttataataaaatagttgtacaaatatcatttatcaa 34114190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 363 - 397
Target Start/End: Original strand, 45764422 - 45764456
Alignment:
Q  363 aaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||||||||||||||||||| ||||||    
T  45764422 aaagttgtcataaaatagttgtataaatatcattt 45764456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 332 - 401
Target Start/End: Original strand, 51908577 - 51908647
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgt-ttaaaagttgtcataaaatagttgtataaatgtcatttttca 401  Q
    ||||||||||||||||||| ||||||||  | |||||||||| ||| || ||||| |||| ||||||||||    
T  51908577 ataatgtgaatatgaaagagaaagttgtcattaaagttgtcacaaattaattgtacaaatatcatttttca 51908647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 12241126 - 12241061
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  12241126 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 12241061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 12694433 - 12694498
Alignment:
Q  334 aatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattttt 399  Q
    ||||||||||||| ||| |||||| |  ||||||||||| ||||| |||||| |||| ||||||||    
T  12694433 aatgtgaatatgagagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatcattttt 12694498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 18568815 - 18568888
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||| |||||| ||| | ||| ||||||||  ||||||||||| ||||| ||||||||||| |||||| ||||    
T  18568815 aatatcatgtgagtataagagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttctcaa 18568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 18880857 - 18880800
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 385  Q
    ||||||||||||| ||||| ||| ||| |||| |||||||| ||||||||| ||||||    
T  18880857 gaatataatgtgagtatgagagagaaaattgtctaaaagttatcataaaattgttgta 18880800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 22071564 - 22071499
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||||||| | ||||||  |||||||||||  ||||| ||||| |||| ||||||    
T  22071564 ataatgtgaatatgaaagagatagttgtcaaaaagttgtcactaaataattgtacaaatatcattt 22071499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 24337358 - 24337399
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtca 372  Q
    |||||||||| ||||| ||||||||||||| |||||||||||    
T  24337358 tataatgtgagtatgagagataaagttgttaaaaagttgtca 24337399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 33820339 - 33820404
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  33820339 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 33820404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 46912798 - 46912867
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||||||||| |||| |||| ||||| | |||||| |||| ||||||    
T  46912798 gaatataatgtgagtatgagagagaaagttgttaaaaaattgtaataaagtggttgtacaaatatcattt 46912867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 37134605 - 37134679
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||| |||||| ||||    
T  37134605 gaatataatatgaatatgaaagagaaagttgttaaaaaattgtcataaaatagttgtacaaatatcatttctcaa 37134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 45150260 - 45150334
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||||| | ||||||    
T  45150260 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatagttgtataagtatcattt 45150334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 7867705 - 7867779
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| | | ||| ||||||||||||||||| |||||||||||| |||| ||||||    
T  7867705 agtaagaatataatgtgagtatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcattt 7867779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 36869831 - 36869905
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  36869831 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatggttgtacaaatatcattt 36869905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 36799470 - 36799401
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| | ||||| ||||||||||||| ||| |||||||||||| |||| ||||||    
T  36799470 gaatataatgtgagtatgagaaataaaattgtttaaaagttatcaaaaaatagttgtacaaatatcattt 36799401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 377
Target Start/End: Original strand, 40785691 - 40785747
Alignment:
Q  321 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 377  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||||||||||||| ||||    
T  40785691 atagtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaa 40785747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 50280093 - 50280160
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||| |||||| |||| |||||| ||||    
T  50280093 atgtgaatatgaaagagaaagttgtacaaaagttgtcatagaatggttgtacaaatatcatttctcaa 50280160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 1295409 - 1295335
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| ||||||||  ||||||| ||| |||||||||||| |||| ||||||    
T  1295409 agtaagaatataatgtgagtatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcattt 1295335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 1901920 - 1901994
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  1901920 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 1901994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 1911366 - 1911440
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  1911366 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 1911440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 28300650 - 28300716
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||||||| ||| ||||||||| ||||||||||||||| | |||||| |||| ||||||    
T  28300650 tataatatgaatatgagagagaaagttgttaaaaagttgtcataaagtggttgtacaaatatcattt 28300716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 462400 - 462469
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||| |||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  462400 gaatataacgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcattt 462469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 12094388 - 12094457
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| | | || || |||| |||||||||||||||||||||||| ||||||    
T  12094388 gaatataatgtgagtatgagagagacattttttaaaaaattgtcataaaatagttgtataaatatcattt 12094457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 402
Target Start/End: Complemental strand, 14957905 - 14957834
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||||||||||||||| ||| ||| ||||| ||||||||||| ||| | |||||| |||| |||||| ||||    
T  14957905 tataatgtgaatatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 14957834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 50294106 - 50294185
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||| ||||||||||||| | ||| ||||||| ||||||||||||||||  ||| | |||||| |||| |||||| ||||    
T  50294106 agtaagaatataatgtgagtgtgagagataaaattgtttaaaagttgtcgcaaagtggttgtacaaatatcatttctcaa 50294185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 275303 - 275229
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| |||| |||| |||||| ||||||||||||||  ||||  ||||| |||| ||||||    
T  275303 agtaagaatataatgtgagtatggaagagaaagttttttaaaagttgtcaataaatgattgtacaaatatcattt 275229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 41717340 - 41717266
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| |||||||| |||| ||||| | | |||||||||||||||||||||  ||||| ||||| |||| ||||||    
T  41717340 agtaagaatataacgtgagtatgagatagaaagttgtttaaaagttgtcactaaataattgtacaaatatcattt 41717266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 45528936 - 45529010
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| |||| |||||||| ||||| | | ||| |||| |||||||||||| |||||||||||| |||| ||||||    
T  45528936 agtaagaatctaatgtgagtatgagaaagaaatttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 45529010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 51464275 - 51464345
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| ||| | |||||| |||| |||||| ||||    
T  51464275 ataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 51464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 7213 - 7282
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||||||||  ||||||||||| |||||  ||||| |||| ||||||    
T  7213 gaatataatgtgagtatgagagagaaagttgtccaaaagttgtcagaaaatgattgtacaaatatcattt 7282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 622460 - 622521
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 390  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||||| |||||| ||||    
T  622460 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaat 622521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 32981121 - 32981182
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 390  Q
    |||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| ||||    
T  32981121 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaat 32981182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 35425671 - 35425728
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 385  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||| ||||| | ||||||    
T  35425671 gaatataatgtgagtatgagagataaagttgtcaaaaagttgtaataaagtggttgta 35425728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 42102309 - 42102260
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 377  Q
    ||||||||| ||| ||||  ||||||||||||||||||||||||| ||||    
T  42102309 gaatataatctgagtatgtgagataaagttgtttaaaagttgtcaaaaaa 42102260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 43333670 - 43333719
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 378  Q
    |||||||||||| ||||||||| | ||||||  |||||||||||||||||    
T  43333670 aatataatgtgagtatgaaagagagagttgtcaaaaagttgtcataaaat 43333719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 43900756 - 43900825
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||||||||  ||||||||| ||||| | |||||| |||| ||||||    
T  43900756 gaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcattt 43900825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 47988488 - 47988553
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  47988488 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 47988553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 47997775 - 47997840
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  47997775 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 47997840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 48007062 - 48007127
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  48007062 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 48007127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 52678576 - 52678645
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||||||||||| ||||||||  |||| || | | ||| | |||||| |||||||||||    
T  52678576 gaatataatgtgaatatgaaagagaaagttgtcaaaaaattattagaaattggttgtacaaatgtcattt 52678645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 20268512 - 20268586
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||| ||||| ||||||||||||||||| |||| |||| |||||||||||||| |||| |||||||||||    
T  20268512 gaatataatatgaatgtgaaagataaagttgttaaaaaattgttataaaatagttgtacaaatatcatttttcaa 20268586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 30530574 - 30530642
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||| ||||| ||| |||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  30530574 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcattt 30530642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 40238515 - 40238441
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||||||||| ||| ||| ||||||||||||||||| |||||  ||||| |||| ||||||    
T  40238515 agtaagaatataatgtgaatatgagagaaaaaattgtttaaaagttgtcaaaaaatgattgtacaaatatcattt 40238441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 5043169 - 5043096
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 396  Q
    |||| ||||||||||||||||||||||| |||||| ||||||| || ||| |||||| ||||| |||| |||||    
T  5043169 agtaagaatataatgtgaatatgaaagagaaagttatttaaaaattatcacaaaataattgtacaaatatcatt 5043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 23554823 - 23554754
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| |||||||||||||||||| || ||| ||||| |||||| |||| ||||||    
T  23554823 gaatataatgtgagtatgagagataaagttgtttaaaaattatcaaaaaatggttgtacaaatatcattt 23554754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 31184352 - 31184284
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||| |||  |||| ||||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  31184352 aatataatttgagcatgagagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcattt 31184284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 403
Target Start/End: Complemental strand, 32821712 - 32821632
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaag 403  Q
    |||| ||||||||||||| ||||| ||| ||| ||||||||||||||||| ||| | |||||| |||| |||||| |||||    
T  32821712 agtaagaatataatgtgagtatgagagagaaaattgtttaaaagttgtcacaaagtggttgtacaaatatcatttctcaag 32821632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 34395919 - 34395987
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||| |||| |||| ||||||    
T  34395919 aatattatgtgagtatgagagagaaagttgttcaaaagttgtcataaaatagatgtacaaatatcattt 34395987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 47138030 - 47138090
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaa 389  Q
    |||||||||||||||||| | | ||||||||| ||||||| | ||||||||||||||||||    
T  47138030 aatataatgtgaatatgagataaaaagttgttcaaaagttataataaaatagttgtataaa 47138090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 50118896 - 50118964
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||||||||| ||||||||||||  ||||||||| ||||| | ||| ||||||| ||||||    
T  50118896 aatataatgtgaatatgagagataaagttgtcaaaaagttgtaataaagtggttatataaatatcattt 50118964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 9882653 - 9882727
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||| ||||| ||||||||| ||||||||||||  ||| ||||||| |||||||||||| |||| ||||||    
T  9882653 agtaagaacataatatgaatatgagagataaagttgtcaaaatgttgtcacaaaatagttgtacaaatatcattt 9882727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 25702209 - 25702283
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| |||||||||||| || ||||||| | |||||| ||||| |||| ||||||    
T  25702209 agtaagaatataatgtgagtatgagagataaagttgtctacaagttgttaaaaaataattgtagaaatatcattt 25702283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 30687129 - 30687055
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| |||| ||||||    
T  30687129 agtaagaatataatgtgagtatgatagaaaaagttgtctaaaagttgtcactaaatggttgtacaaatatcattt 30687055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 31703481 - 31703551
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||| ||||| ||| ||||||||| |||| |||||| |||||| |||| ||||| |||||||||||    
T  31703481 ataatgtgagtatgagagagaaagttgttaaaaaattgtcaaaaaataattgtctaaatatcatttttcaa 31703551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 43640984 - 43641051
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||  ||||| |||||||||||||||||||| |||| ||||| |||||| |||| ||||||    
T  43640984 gaatataatgtg--tatgagagataaagttgtttaaaagtagtcaaaaaatggttgtacaaatatcattt 43641051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 7078499 - 7078568
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| |||||| ||||| ||| ||||||||| ||||||||||| ||||||| |||| |||| ||||||    
T  7078499 gaatattatgtgagtatgagagagaaagttgttcaaaagttgtcacaaaatagatgtacaaatatcattt 7078568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 30530398 - 30530467
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||||||||| ||||||||| ||||| | |||||| |||| ||||||    
T  30530398 gaatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcattt 30530467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 44950420 - 44950464
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtca 372  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||    
T  44950420 gaatataatgtgagtatgaaagagaaagttgttaaaaagttgtca 44950464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 400
Target Start/End: Original strand, 48576504 - 48576576
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 400  Q
    |||||||||| |||||||| ||| |||||| |  ||||||||||||||||| ||| || |||| |||||||||    
T  48576504 gaatataatgcgaatatgagagagaaagttatcaaaaagttgtcataaaatggttatacaaatatcatttttc 48576576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 52417602 - 52417530
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttca 401  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||| |||||||  |||| ||||||||||    
T  52417602 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtagttgtccaaatatcatttttca 52417530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 384
Target Start/End: Original strand, 18954300 - 18954355
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgt 384  Q
    |||||||||| ||||||| ||||||||||||| |||| |||||| ||||| |||||    
T  18954300 aatataatgtaaatatgagagataaagttgttaaaaaattgtcacaaaatggttgt 18954355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 51168762 - 51168817
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 378  Q
    |||| ||||||||||||||||||| ||| |||||||| |||||||| ||| |||||    
T  51168762 agtaagaatataatgtgaatatgagagaaaaagttgtctaaaagttatcacaaaat 51168817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 18610838 - 18610776
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||| ||| ||||||||  ||||||||||| |||||||||||| |||| ||||||    
T  18610838 atgtgagtatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcattt 18610776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 377
Target Start/End: Original strand, 21255779 - 21255833
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 377  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||    
T  21255779 agtaagaatataatgtgagtatgagagaaaaagttgtctaaaagttgtcaaaaaa 21255833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 332 - 370
Target Start/End: Complemental strand, 24158718 - 24158680
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgt 370  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  24158718 ataatgtgagtatgaaagataaagttgtataaaagttgt 24158680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 25988978 - 25989052
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| ||| |||| |||||||||| | ||||| |||||| |||| ||||||    
T  25988978 agtaagaatataatgtgagtatgagagagaaaattgtctaaaagttgttaaaaaatggttgtacaaatatcattt 25989052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 27352707 - 27352633
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| ||||||||  ||||||| ||| ||||| |||||| |||| ||||||    
T  27352707 agtaagaatataatgtgagtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcattt 27352633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 33675969 - 33675903
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||| ||||| ||| |||||||||  |||||||||| ||| | |||||| |||||||||||    
T  33675969 tataatgtgagtatgagagagaaagttgttacaaagttgtcaaaaagtggttgtacaaatgtcattt 33675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 6954359 - 6954310
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtca 372  Q
    |||| ||| ||||||||||||||| ||||||  |||||||||||||||||    
T  6954359 agtaagaacataatgtgaatatgagagataatattgtttaaaagttgtca 6954310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 11097883 - 11097952
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| |||||| ||||| ||| ||||||||| ||||||||||| ||||| | |||| |||| ||||||    
T  11097883 gaatattatgtgagtatgagagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcattt 11097952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 18541054 - 18541119
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||| ||| ||||||||  ||||||||| | ||||| |||||| |||| ||||||    
T  18541054 ataatgtgaatatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcattt 18541119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 26547306 - 26547237
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| |||||||||||| ||| ||||||||| |||| |||||| ||||||  |||| |||| ||||||    
T  26547306 gaatattatgtgaatatgagagagaaagttgttcaaaaattgtcacaaaatatatgtacaaatatcattt 26547237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 30439318 - 30439253
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||||||||||||  |||| |||||||||| | |||||| |||| ||||||    
T  30439318 ataatgtgagtatgagagataaagttgtcaaaaaattgtcataaattggttgtacaaatatcattt 30439253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 34941912 - 34941969
Alignment:
Q  321 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 378  Q
    |||||| ||||||||||||| ||||| ||| |||||||| ||||| |||||| |||||    
T  34941912 atagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaaat 34941969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 400
Target Start/End: Original strand, 36930748 - 36930824
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 400  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||| ||| |||||  ||||| |||| |||||||||    
T  36930748 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagtt-tcacaaaatgattgtacaaatatcatttttc 36930824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 49596307 - 49596238
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||||||||  |||| |||| ||||||| |||||| |||| ||||||    
T  49596307 gaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaaatggttgtacaaatatcattt 49596238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 9e-17; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 37392115 - 37392046
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||| |||| ||||||    
T  37392115 gaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatggttgtacaaatatcattt 37392046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 323 - 404
Target Start/End: Complemental strand, 26123444 - 26123362
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtc-ataaaatagttgtataaatgtcatttttcaaga 404  Q
    |||| ||||||||||||||||||| ||| |||||||| ||||||||||| | |||||||||||| |||| ||||| |||||||    
T  26123444 agtaagaatataatgtgaatatgagagagaaagttgtctaaaagttgtcaaaaaaatagttgtacaaatatcattcttcaaga 26123362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 4971369 - 4971293
Alignment:
Q  321 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  4971369 atagtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcattt 4971293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 40760770 - 40760841
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||| ||||| |||||||||||  |||||||| ||||||| ||| ||||||||||||||||| |||||||||||    
T  40760770 aatacaatgtaaatatgaaaga--aagttgttcaaaagttatcacaaaatagttgtataaatatcatttttcaa 40760841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 22692156 - 22692087
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||| | ||||| ||| ||| ||||||||||||||||||||||| |||||| |||| ||||||    
T  22692156 gaatataatgtaagtatgagagagaaaattgtttaaaagttgtcataaaatggttgtacaaatatcattt 22692087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 402
Target Start/End: Complemental strand, 28110028 - 28109955
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    |||||||||||| ||||  ||||||||||||||||||||||||| ||| | |||||| |||| |||||| ||||    
T  28110028 aatataatgtgagtatgtgagataaagttgtttaaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 28109955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 323 - 400
Target Start/End: Original strand, 34304672 - 34304749
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 400  Q
    |||| ||||||||||||| ||||| ||| ||| |||| ||||| |||||| |||||||||||| |||| |||||||||    
T  34304672 agtaagaatataatgtgagtatgagagagaaaattgtctaaaaattgtcaaaaaatagttgtacaaatatcatttttc 34304749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 45154539 - 45154607
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||||||| |||||| | |||||||||||| |||||||||||| |||| ||||||    
T  45154539 gaatataatgtgagtatgaaagagaaagttatctaaaagttgtca-aaaatagttgtacaaatatcattt 45154607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 40693528 - 40693596
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||| | ||||| ||| |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  40693528 aatataatgtaagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 40693596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 44187768 - 44187713
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 378  Q
    |||| ||||||||||||| ||||| | ||||||||||||||||||||||| |||||    
T  44187768 agtaagaatataatgtgagtatgagaaataaagttgtttaaaagttgtcaaaaaat 44187713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 8061738 - 8061812
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||||||||||||| ||| || | ||||| || ||||||||| |||||| |||| ||||||    
T  8061738 agtaagaatataatgtgaatatgaaagagaaaattatctaaaatttttcataaaatggttgtagaaatatcattt 8061812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 42640911 - 42640841
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||| |||| |||| ||||||||  ||||||||| | |||||||||||| |||| |||||||||||    
T  42640911 ataatgtgagtatgtaagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttttcaa 42640841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 26153717 - 26153649
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||| ||||  |||||||||||||||||||||||| |||| ||||||    
T  26153717 gaatataatgtgagtatgagagagaaaattgtc-aaaagttgtcataaaatagttgtacaaatatcattt 26153649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 44564722 - 44564790
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||||| | |||||||| ||||| |||||| |||||||||||| |||| ||||||    
T  44564722 gaatataatgtgagtatgaaataaaaagttgtctaaaaattgtca-aaaatagttgtacaaatatcattt 44564790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 396
Target Start/End: Complemental strand, 5724110 - 5724042
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 396  Q
    ||||||||||||| ||||| ||| ||||||||| ||||||||| ||||| | |||||| |||| |||||    
T  5724110 gaatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcatt 5724042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 400
Target Start/End: Original strand, 5868301 - 5868373
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 400  Q
    |||||| |||||| ||| ||||| ||||||||| ||||||||| | |||||||||||| |||| || ||||||    
T  5868301 gaatatcatgtgagtataaaagaaaaagttgttcaaaagttgttacaaaatagttgtacaaatatcgtttttc 5868373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 43107681 - 43107637
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcat 373  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||    
T  43107681 aatataatgtgagtatgagagataaagttgtctaaaagttgtcat 43107637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 378
Target Start/End: Complemental strand, 5978648 - 5978601
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 378  Q
    |||||||||| ||||||||| ||| ||||| |||||||||||||||||    
T  5978648 tataatgtgagtatgaaagagaaaattgttaaaaagttgtcataaaat 5978601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 401
Target Start/End: Original strand, 18925991 - 18926067
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttca 401  Q
    |||| ||||||||||||| ||||| ||| ||||||||| ||||||||||  |||| | ||||| |||| ||||||||||    
T  18925991 agtaagaatataatgtgagtatgagagagaaagttgttcaaaagttgtc--aaaaaaattgtacaaatatcatttttca 18926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 28824572 - 28824506
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||||||| ||| ||||||||  ||||||||||| ||| | |||||| |||| ||||||    
T  28824572 tataatgtgaatatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcattt 28824506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 30769664 - 30769727
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||||||||||||  |||||||||  ||||||||||||| |||| ||||||    
T  30769664 ataatgtgagtatgagagataaagttgtcaaaaagttgt--taaaatagttgtacaaatatcattt 30769727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 37385239 - 37385301
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||| ||| ||||||||  ||||||||||| |||||||||||| |||| ||||||    
T  37385239 atgtgagtatgagagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcattt 37385301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 46148238 - 46148188
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 378  Q
    ||||||||||||| ||||| ||||||| |||||| |||||||||| |||||    
T  46148238 gaatataatgtgagtatgagagataaacttgtttcaaagttgtcaaaaaat 46148188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 47530305 - 47530359
Alignment:
Q  343 atgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||| ||| ||||| ||||||||||||||||| ||||||||||| ||||||    
T  47530305 atgagagagaaaattgttcaaaagttgtcataaaatggttgtataaatatcattt 47530359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 16567388 - 16567319
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||||||| ||| ||||  ||||||| | ||||||| |||||| |||| ||||||    
T  16567388 gaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcattt 16567319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 16598274 - 16598343
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||||||| ||| ||||  ||||||| | ||||||| |||||| |||| ||||||    
T  16598274 gaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcattt 16598343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 17500769 - 17500700
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||||||||||||  ||||||| | ||||| | |||||| |||| ||||||    
T  17500769 gaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcattt 17500700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 17552445 - 17552514
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||||||||||||  ||||||| | ||||| | |||||| |||| ||||||    
T  17552445 gaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcattt 17552514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 19426648 - 19426583
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||| ||||||||  ||||||||||| ||||| |||||| |||| ||||||    
T  19426648 ataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcattt 19426583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 4e-16; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 12044403 - 12044335
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||||||| ||||||    
T  12044403 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtataaatatcattt 12044335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 9188938 - 9189012
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| |||||||||||| |||||||||| | ||||| |||||| |||| ||||||    
T  9188938 agtaagaatataatgtgagtatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcattt 9189012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 32729966 - 32729892
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  32729966 agtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcagaaaatggttgtacaaatatcattt 32729892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 30744314 - 30744247
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 390  Q
    |||| ||||||||||||| ||||| ||| ||||||||||||||| ||||| ||||| |||||| ||||    
T  30744314 agtaagaatataatgtgagtatgagagacaaagttgtttaaaaggtgtcacaaaatggttgtacaaat 30744247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 14803376 - 14803428
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgt 384  Q
    ||||||||| ||||||||| | ||||||| ||||||||||| |||||||||||    
T  14803376 ataatgtgagtatgaaagagagagttgttaaaaagttgtcacaaaatagttgt 14803428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 20712145 - 20712070
Alignment:
Q  321 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||||||||||  ||||| ||| |||||||| |||||||||| | |||||||||||| |||| ||||||    
T  20712145 atagtaagaatataatgtgcgtatgagagagaaagttgtctaaaagttgtta-aaaatagttgtacaaatatcattt 20712070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 35077190 - 35077126
Alignment:
Q  334 aatgtgaatatgaaagataaagttgtt-taaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||| |||||  |||| ||||||    
T  35077190 aatgtgagtatgaaagataaagttgttataaaagttgtcaaaaaattgttgttcaaatatcattt 35077126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 6435101 - 6435039
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||| |||||||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  6435101 atgtgagtatgagagataaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 6435039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 29376721 - 29376783
Alignment:
Q  335 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||| ||||| ||| ||||||||| ||||||||||| ||||| |||||| |||| ||||||    
T  29376721 atgtgactatgatagagaaagttgttaaaaagttgtcacaaaatggttgtaaaaatatcattt 29376783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 11785427 - 11785358
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||||||| | | ||||||||  |||| |||||| ||||| |||||| |||| ||||||    
T  11785427 gaatataatgtgaatatgagatagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcattt 11785358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 21506404 - 21506339
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||| ||||| ||| ||||||||  ||||||||||| ||||| |||||| |||| ||||||    
T  21506404 ataatgtgagtatgagagagaaagttgtcaaaaagttgtcaaaaaatggttgtacaaatatcattt 21506339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 1052490 - 1052564
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||| | ||||| |||||| |||| ||||||    
T  1052490 agtaagaatataatgtgaatatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcattt 1052564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 9202519 - 9202584
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||||||| ||||||||  |||| |||||||||||| |||||| |||| ||||||    
T  9202519 ataatgtgaatatgaaagagaaagttgtcaaaaaattgtcataaaatggttgtagaaatatcattt 9202584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 36816419 - 36816484
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||||||| | ||||||  |||| || ||||||||||||||||||||| ||||||    
T  36816419 ataatgtgaatatgaaagagagagttgtcaaaaaattatcataaaatagttgtataaatatcattt 36816484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 6742404 - 6742459
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 378  Q
    |||| ||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  6742404 agtaagaagataatgtgaatatgaaagagaaagttgttcaaaagttgtcacaaaat 6742459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 14714055 - 14713989
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||| ||||| ||| || |||||||||||||||||||||||| | |||| |||| ||||||    
T  14714055 tataatgtgagtatgagagagaatgttgtttaaaagttgtcataaaattgatgtacaaatatcattt 14713989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 23358573 - 23358647
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||| | ||||| || |||||||| ||||||    
T  23358573 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgttaaaaaattgtagtataaatatcattt 23358647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 30856884 - 30856810
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  30856884 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 30856810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 36763518 - 36763591
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||||||| |||||||| |||||||| ||| |||| ||||||| |||| ||||||    
T  36763518 agtaagaatataatgtgagtatgaaagagaaagttgtataaaagttatca-aaaaaagttgtacaaatatcattt 36763591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 342 - 396
Target Start/End: Original strand, 43621961 - 43622015
Alignment:
Q  342 tatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 396  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||    
T  43621961 tatgagagagaaagttgttcaaaagttgtcataaaatagttgtacaaatatcatt 43622015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 3299128 - 3299173
Alignment:
Q  352 aaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||    
T  3299128 aaagttgtttaaaagttgtcataaaatggttgtacaaatatcattt 3299173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 546385 - 546453
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||| ||||| ||| ||||||||| ||||||||| ||||| | |||||| |||| ||||||    
T  546385 aatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcattt 546453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 7497991 - 7498059
Alignment:
Q  329 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||||| |||||| |||| ||||||    
T  7497991 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcattt 7498059  T

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Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 400
Target Start/End: Complemental strand, 35965647 - 35965575
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 400  Q
    ||||||||||||| ||||||||| ||||||||  |||| |||| ||||| | |||||| |||| |||||||||    
T  35965647 gaatataatgtgagtatgaaagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttttc 35965575  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 8352912 - 8352838
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| ||| |||| |||||||| | | |||||||||||| |||| ||||||    
T  8352912 agtaagaatataatgtgagtatgagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcattt 8352838  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 14954598 - 14954648
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 378  Q
    |||||| |||||||||||| ||| ||||||||| ||||||||||| |||||    
T  14954598 gaatattatgtgaatatgagagagaaagttgttcaaaagttgtcacaaaat 14954648  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 15283244 - 15283318
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||| |||||| ||| | |||||| |||| ||||||    
T  15283244 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcattt 15283318  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 28165201 - 28165127
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||||||| ||||| ||| ||| |||| |||||||||||| ||||| |||||| || | |||||| ||||    
T  28165201 gaatataatgtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtacaagtatcatttctcaa 28165127  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 39147834 - 39147780
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtt-taaaagttgtcataaaatagttgta 385  Q
    ||||||||||||||||||| |||||||||  ||||||||| | ||||||||||||    
T  39147834 ataatgtgaatatgaaagagaaagttgttacaaaagttgtaaaaaaatagttgta 39147780  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 2308321 - 2308390
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||||||||||||  ||| ||||||| ||| | |||||| |||| ||||||    
T  2308321 gaatataatgtgagtatgagagataaagttgtcaaaaggttgtcaaaaattggttgtacaaatatcattt 2308390  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 3959966 - 3959897
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||| |||| |||||||||||| ||||  |||||| |||| ||||||    
T  3959966 gaatataatgtgagtatgagagagaaaattgtgtaaaagttgtcaaaaaaaggttgtacaaatatcattt 3959897  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 6746285 - 6746220
Alignment:
Q  332 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||| ||||||||| ||| ||| ||||| ||||||||| | ||| ||||||||||||| ||||||    
T  6746285 ataatatgaatatgagagagaaaattgttaaaaagttgttaaaaattagttgtataaatatcattt 6746220  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 355 - 404
Target Start/End: Complemental strand, 22303248 - 22303199
Alignment:
Q  355 gttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaaga 404  Q
    |||||| ||||||||||| |||||||||||| |||| |||||| ||||||    
T  22303248 gttgttcaaaagttgtcaaaaaatagttgtacaaatatcatttctcaaga 22303199  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 42554848 - 42554779
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| ||| ||||||||  ||||||||| ||||| | |||||| |||| ||||||    
T  42554848 gaatataatgtgagtatgagagagaaagttgtaaaaaagttgtaataaagtggttgtacaaatatcattt 42554779  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 60541 - 60472
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||||||||||||| ||||||||  ||||||||| ||||||| |||||| |||| ||||||    
T  60541 gaatataatgtgaatatgaaagaaaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcattt 60472  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 440795 - 440721
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||| ||||||| ||||| ||| |||||||| |||||||||||||||| |||||||| |||| ||||||    
T  440795 agtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcataaagtagttgtacaaatatcattt 440721  T

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Target: scaffold0662 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 1135 - 1081
Alignment:
Q  343 atgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  1135 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcattt 1081  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 337195 - 337121
Alignment:
Q  323 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||| ||||||||||||| ||||| ||| |||||| || ||||||||||| ||||| |||||| |||| ||||||    
T  337195 agtaagaatataatgtgagtatgagagagaaagttattcaaaagttgtcagaaaatggttgtacaaatatcattt 337121  T

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Target: scaffold0252 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 8001 - 8045
Alignment:
Q  355 gttgtttaaaagttgtcataaaatagttgtataaatgtcattttt 399  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||    
T  8001 gttgttcaaaagttgtcataaaatggttgtataaatatcattttt 8045  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 34477 - 34411
Alignment:
Q  331 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    |||||||||| ||||| ||| ||||||||   |||||||||| |||||||||||| |||| ||||||    
T  34477 tataatgtgagtatgagagagaaagttgtcacaaagttgtcaaaaaatagttgtacaaatatcattt 34411  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 155978 - 155904
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 402  Q
    ||||||||||||| || || ||| ||||||||  ||||||||| ||||||| |||||| |||| |||||| ||||    
T  155978 gaatataatgtgagtacgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctcaa 155904  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 4387 - 4318
Alignment:
Q  328 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 397  Q
    ||||||||||||| ||||| | | ||||||||  ||||||| ||||||||| |||||| |||| ||||||    
T  4387 gaatataatgtgagtatgagatagaaagttgtcaaaaagttatcataaaatggttgtacaaatatcattt 4318  T

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