View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18592_low_2 (Length: 563)

Name: NF18592_low_2
Description: NF18592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18592_low_2
NF18592_low_2
[»] chr3 (27 HSPs)
chr3 (6-549)||(46554021-46554591)
chr3 (11-405)||(46531644-46532049)
chr3 (185-372)||(46483961-46484145)
chr3 (179-385)||(46538892-46539107)
chr3 (124-401)||(46479642-46479916)
chr3 (122-401)||(45883734-45884010)
chr3 (130-372)||(46473787-46474026)
chr3 (179-313)||(46544364-46544498)
chr3 (194-311)||(45902876-45902993)
chr3 (123-250)||(16025332-16025459)
chr3 (185-396)||(51943803-51944011)
chr3 (122-266)||(5160125-5160268)
chr3 (131-250)||(46490568-46490687)
chr3 (196-306)||(46549078-46549188)
chr3 (186-311)||(46526511-46526635)
chr3 (124-266)||(5156097-5156239)
chr3 (486-546)||(46236634-46236694)
chr3 (474-546)||(47397148-47397220)
chr3 (471-546)||(45883573-45883648)
chr3 (229-311)||(4613925-4614007)
chr3 (476-546)||(46532134-46532204)
chr3 (328-385)||(46544525-46544582)
chr3 (123-203)||(47414380-47414460)
chr3 (475-546)||(5160488-5160559)
chr3 (471-546)||(16025694-16025769)
chr3 (475-546)||(46539211-46539282)
chr3 (329-401)||(46236796-46236868)
[»] chr7 (6 HSPs)
chr7 (124-401)||(17735779-17736053)
chr7 (124-389)||(17708125-17708387)
chr7 (130-389)||(17717955-17718211)
chr7 (130-401)||(17744966-17745233)
chr7 (124-401)||(16722002-16722276)
chr7 (124-401)||(17699016-17699290)
[»] chr4 (4 HSPs)
chr4 (194-401)||(35162361-35162564)
chr4 (122-236)||(15555862-15555976)
chr4 (187-401)||(35155333-35155544)
chr4 (492-546)||(35162669-35162723)
[»] chr8 (5 HSPs)
chr8 (187-306)||(21464281-21464400)
chr8 (471-546)||(9675536-9675611)
chr8 (471-546)||(9692558-9692633)
chr8 (471-546)||(21464030-21464105)
chr8 (334-402)||(21464188-21464256)


Alignment Details
Target: chr3 (Bit Score: 440; Significance: 0; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 6 - 549
Target Start/End: Complemental strand, 46554591 - 46554021
Alignment:
Q  6 attaattttatatttgatgttgtctaaagcctgatgaagctgtcaaaaaagtgaatttatgggctacagaaaagacaaacggacttattactgatgttct 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46554591 attaattttatatttgatgttgtctaaagcctgatgaagctgtcaaaaaagtgaatttatgggctacagaaaagacaaacggacttattactgatgttct 46554492  T
Q  106 ttcgtgcgggtcaattga-------------ctcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaa 192  Q
    ||||||||||||||||||             ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46554491 ttcgtgcgggtcaattgatagtttaaccagactcatttttgctaatgcactatattttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaa 46554392  T
Q  193 gactatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtcc 292  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46554391 gactatgattttcaccttcttgatggtagctcattcaaggttcccttcaagaccagcagggagagtcagtttatcagtgtttttgatggttttaaggtcc 46554292  T
Q  293 ttggtcttccttatgagcatggtactatagatgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaa 392  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46554291 ttcgtcttccttatgagcatggtactatagatgaccgtcatttctctatgtactttttacttcccgatgcaaaagatgggttgtcagctttgattgagaa 46554192  T
Q  393 agtggcttccaaatatgagaccctggaacacatacttcctgatagtatagttgatgtgggtgactttaggattccaag--------------ttgggctt 478  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              ||||| ||    
T  46554191 agtggcttcggaatatgagaccctggaacacatacttcctgatagtatagttgatgtgggtgactttaggattccaagtttcgaaatttcttttgggttt 46554092  T
Q  479 gaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagt 549  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46554091 gaactttctaatatgctgaaggagttgggagtgattttacctttctctaatggaggtttaacaaaaatagt 46554021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 11 - 405
Target Start/End: Original strand, 46531644 - 46532049
Alignment:
Q  11 ttttatatttgatgttgtc-taaagcctgatgaagctgtcaaaaaagtgaatttatgggctacagaaaagacaaacggacttattactgatgttctttcg 109  Q
    |||||||||||||| |||| ||||| |||||||||| |||||||||||||||  |||||||| | || |||||||||||| ||||  ||||||||||||     
T  46531644 ttttatatttgatgctgtcgtaaaggctgatgaagccgtcaaaaaagtgaatgcatgggctaaaaaagagacaaacggacgtattggtgatgttctttca 46531743  T
Q  110 tgcgggtcaattga-------------ctcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagact 196  Q
       |||||||||||             |||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||||| |||||||||||     
T  46531744 cctgggtcaattgatagcttaactggactcatttttgctaatgcactctactttaatggagcatggcatcaaccatttgatgcttcaaaaacaaaagacc 46531843  T
Q  197 atgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttgg 296  Q
    |||||||||||||||| | ||| |||||| | |||||||||||||||||||||| | |||  |||||||| | || |||||||||||||||| ||||| |    
T  46531844 atgattttcaccttctcggtggcagctcaattaaggttcccttcatgactagcaagaagaagcagtttataaatgcttttgatggttttaagatccttcg 46531943  T
Q  297 tcttccttatgagcatggtactatagatgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaagtg 396  Q
    |||||||||| |||| ||    |  |||   ||||| ||||||||||||||||| ||||||| |||| ||||||| |||| |||||||||||||||||||    
T  46531944 tcttccttataagcaagg---caacgatattcgtcaattctctatgtacttttttcttcccgatgcacaagatggattgttagctttgattgagaaagtg 46532040  T
Q  397 gcttccaaa 405  Q
    |||||||||    
T  46532041 gcttccaaa 46532049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 185 - 372
Target Start/End: Original strand, 46483961 - 46484145
Alignment:
Q  185 aaacaaaagactatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttt 284  Q
    ||||||||||||||||||||||||||||  |||| |||||| ||||||||||||| |||||||||| | |||  |||||||| || | ||||||||||||    
T  46483961 aaacaaaagactatgattttcaccttctcaatggcagctcagtcaaggttccctttatgactagcaagaagaagcagtttattagagcttttgatggttt 46484060  T
Q  285 taaggtccttggtcttccttatgagcatggtactatagatgaccgtcatttctctatgtactttttacttcccgttgcaaaagatggg 372  Q
    ||| || ||||||||||||||| |||| ||  | | |||| | |||| |||| ||||||||||||| |||||   |||||||||||||    
T  46484061 taaagttcttggtcttccttataagcaagg--cga-agataagcgtcgtttcactatgtacttttttcttccaaatgcaaaagatggg 46484145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 385
Target Start/End: Original strand, 46538892 - 46539107
Alignment:
Q  179 cttcagaaacaaaagactatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttga 278  Q
    ||||| |||||||||||||||||||| |||||||  |||| |||||| ||||||||||||||||||| ||| ||||| | ||  |||| |||||||||||    
T  46538892 cttcaaaaacaaaagactatgattttaaccttcttaatggcagctcagtcaaggttcccttcatgacaagccgggagtgacaacttattagtgtttttga 46538991  T
Q  279 tggttttaaggtccttggtcttccttatgagcatggtact---------atagatgaccgtcatttctctatgtactttttacttcccgttgcaaaagat 369  Q
    ||||||||| |||||  |||||  |||| |||||| | ||         |  ||| | ||| ||||||||||||||||||| ||||| | ||||||||||    
T  46538992 tggttttaaagtcctccgtcttttttataagcatgatgcttttaggcaaagtgataagcgttatttctctatgtacttttttcttcctgatgcaaaagat 46539091  T
Q  370 gggttgtcagctttga 385  Q
    ||||||| ||||||||    
T  46539092 gggttgttagctttga 46539107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 124 - 401
Target Start/End: Original strand, 46479642 - 46479916
Alignment:
Q  124 ctcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagct 223  Q
    ||||| ||||| |||||||||||||| ||||| || ||| || |   |||||| |||||| ||||  ||||||| || ||||||||| |  ||||||||     
T  46479642 ctcatctttgccaatgcactatacttcaaaggagcgtggaatgataagtttgatgcttcaaaaacggaagactacgagtttcaccttttgaatggtagcc 46479741  T
Q  224 cattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagcatggtactataga 323  Q
    || ||||||||||||||||||| |||| | |||  |||||||| || | ||||||||||||||| || || |||||||||||| |||| ||  | | |||    
T  46479742 cagtcaaggttcccttcatgaccagcaagaagaagcagtttattagagcttttgatggttttaaagttctcggtcttccttataagcaagg--cga-aga 46479838  T
Q  324 tgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaagtggcttc 401  Q
    | | ||||| ||| | ||||||||||| |||||   |||||||||||||||| |||||||| | || || ||||||||    
T  46479839 taagcgtcaattcaccatgtacttttttcttccaaatgcaaaagatgggttggcagctttggtcgaaaaggtggcttc 46479916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 122 - 401
Target Start/End: Complemental strand, 45884010 - 45883734
Alignment:
Q  122 gactcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtag 221  Q
    ||||||| |||||||||||| | |||||||| || |||||| |||||||||||||  ||||  |||||||| |||| ||||||||  |||   |||||||    
T  45884010 gactcatatttgctaatgcattgtactttaagggagcatggaatcaaccgtttgatccttcgaaaacaaaatactacgattttcatattcataatggtag 45883911  T
Q  222 ctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagcatggtactata 321  Q
     ||| |||| |||||||||||||| |||| | |   ||| ||||| || | ||||||||||||||| || ||| || | ||||||||||| ||   |  |    
T  45883910 ttcagtcaaagttcccttcatgaccagcaagaaagatcaatttattagagcttttgatggttttaaagtgctttgtatcccttatgagcaagg---tgga 45883814  T
Q  322 gatgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaagtggcttc 401  Q
    ||| | ||||  ||||||||||||||||| |||||   ||||||||||||  ||||||||||| | ||||| ||||||||    
T  45883813 gataagcgtcgattctctatgtacttttttcttccaaatgcaaaagatggactgtcagctttggtcgagaaggtggcttc 45883734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 372
Target Start/End: Original strand, 46473787 - 46474026
Alignment:
Q  130 tttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagctcattca 229  Q
    |||||||||||| | || ||||||||  ||||| ||||   | |||| ||||||  ||||||||||||||||||| |||||||  |||| |||||| | |    
T  46473787 tttgctaatgcattgtattttaaaggatcatggaatcagaagattgatgcttcaacaacaaaagactatgatttttaccttctcaatggcagctcagtta 46473886  T
Q  230 aggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagcatggtactatagatgaccg 329  Q
    ||||| |||| |||||||||| | |||  |||||||| || | ||||||||||||||| || ||||||||||||||| |||| ||  | | |||| | ||    
T  46473887 aggtttcctttatgactagcaagaagaagcagtttattagagcttttgatggttttaaagttcttggtcttccttataagcaagg--cga-agataagcg 46473983  T
Q  330 tcatttctctatgtactttttacttcccgttgcaaaagatggg 372  Q
    || |||| ||||||||||||| |||||   |||||||||||||    
T  46473984 tcgtttcactatgtacttttttcttccaaatgcaaaagatggg 46474026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 46544364 - 46544498
Alignment:
Q  179 cttcagaaacaaaagactatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttga 278  Q
    ||||| |||||||||||||||||||| |||||||  |||| |||  | |||||||||| |||||||| |||| | |||| || |||||||||||||||||    
T  46544364 cttcaaaaacaaaagactatgattttaaccttctcaatggcagccaagtcaaggttcctttcatgacaagcatgaagagacaatttatcagtgtttttga 46544463  T
Q  279 tggttttaaggtccttggtcttccttatgagcatg 313  Q
    ||||||||| |||||| |||||  |||| ||||||    
T  46544464 tggttttaaagtccttcgtcttttttataagcatg 46544498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 194 - 311
Target Start/End: Original strand, 45902876 - 45902993
Alignment:
Q  194 actatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtcct 293  Q
    ||||| ||||| |||||||| ||||||||||| ||||||||||||||||||| |||  | |||| ||||||||| | ||||| |||||||| || || ||    
T  45902876 actataatttttaccttctaaatggtagctcagtcaaggttcccttcatgaccagcgagaagaggcagtttatccgcgttttcgatggtttcaaagtact 45902975  T
Q  294 tggtcttccttatgagca 311  Q
    | ||||||||||||||||    
T  45902976 tcgtcttccttatgagca 45902993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 250
Target Start/End: Original strand, 16025332 - 16025459
Alignment:
Q  123 actcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagc 222  Q
    |||||| |||||||||||||| ||||||||||| |  ||| |||||| |||||| ||||| |||||||||||||||||||||||| ||||  |||| | |    
T  16025332 actcatatttgctaatgcactttactttaaaggggtgtgggatcaacagtttgatgcttcggaaacaaaagactatgattttcacattctgaatggcaac 16025431  T
Q  223 tcattcaaggttcccttcatgactagca 250  Q
      | |||| |||||||||||||| ||||    
T  16025432 gtaatcaaagttcccttcatgaccagca 16025459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 396
Target Start/End: Original strand, 51943803 - 51944011
Alignment:
Q  185 aaacaaaagactatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttt 284  Q
    |||| ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||   |||  ||||||||    |||| ||||| |||    
T  51943803 aaactaaagattatgattttcaccttctaaatggtagctcagtcaaggttcccttcatgaccagcaataagaagcagtttattgaagtttatgatgattt 51943902  T
Q  285 taaggtccttggtcttccttatgagcatggtactatagatgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttg 384  Q
    ||| || |||  |||||||||| || | ||   |  |||| | || || ||||||||||| ||||| |||||   ||||||||||||||||||||||||     
T  51943903 taaagttcttcatcttccttataagaaagg---tgaagataagcgccaattctctatgtatttttttcttccaaatgcaaaagatgggttgtcagcttta 51943999  T
Q  385 attgagaaagtg 396  Q
     |||| ||||||    
T  51944000 gttgaaaaagtg 51944011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 266
Target Start/End: Original strand, 5160125 - 5160268
Alignment:
Q  122 gactcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtag 221  Q
    ||||||| |||||||||||||| ||||||||||| ||||||  | |   |||||| | |||  |||| ||||||||||||||||||||| |  |||| ||    
T  5160125 gactcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgtttcgaaaacgaaagactatgattttcaccttttgaatgg-ag 5160223  T
Q  222 ctcattcaaggttcccttcatgactagcagggagagtcagtttat 266  Q
    |||| ||||||||||||||||||| |||  ||||| |||||||||    
T  5160224 ctcagtcaaggttcccttcatgaccagcgaggagaatcagtttat 5160268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 46490568 - 46490687
Alignment:
Q  131 ttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagctcattcaa 230  Q
    ||||||||||||||||||| ||||| |  ||| || |   |||||| |||||| |||| ||||||||||||||||||||| |  |||| |||||| | ||    
T  46490568 ttgctaatgcactatacttcaaaggagtgtggaatgataagtttgatgcttcaaaaacgaaagactatgattttcaccttttgaatggcagctcaattaa 46490667  T
Q  231 ggttcccttcatgactagca 250  Q
    ||||||||||||||||||||    
T  46490668 ggttcccttcatgactagca 46490687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 306
Target Start/End: Complemental strand, 46549188 - 46549078
Alignment:
Q  196 tatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttg 295  Q
    |||||||||||||||||  |||| |||||  |||||||||||||||| || |||||| |   ||||||||||||||||||||||||||| || || |||     
T  46549188 tatgattttcaccttctcaatggcagctcggtcaaggttcccttcataaccagcaggaatgatcagtttatcagtgtttttgatggtttcaaagttcttt 46549089  T
Q  296 gtcttccttat 306  Q
     ||||||||||    
T  46549088 atcttccttat 46549078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 186 - 311
Target Start/End: Complemental strand, 46526635 - 46526511
Alignment:
Q  186 aacaaaagactatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggtttt 285  Q
    ||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||||| |||  | | || || |||||||||||||| ||||||||     
T  46526635 aacaaaaaactatgattttcacctt-taaatggcagctcagtcaaggttcccttcatgaccagcgagaatagacaatttatcagtgttttcgatggtttc 46526537  T
Q  286 aaggtccttggtcttccttatgagca 311  Q
    || || ||  ||||||||||| ||||    
T  46526536 aaagtactccgtcttccttataagca 46526511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 266
Target Start/End: Original strand, 5156097 - 5156239
Alignment:
Q  124 ctcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagct 223  Q
    ||||| |||||||||||||| ||||||||||| ||||||  | |   |||||| | ||   |||| ||||||||||||||||||||| |  |||| ||||    
T  5156097 ctcatctttgctaatgcactctactttaaaggagcatggagtgagaagtttgatgttttgaaaacgaaagactatgattttcaccttttgaatggcagct 5156196  T
Q  224 cattcaaggttcccttcatgactagcagggagagtcagtttat 266  Q
    |  ||||||||||||||||||| |||  ||||| |||||||||    
T  5156197 cggtcaaggttcccttcatgaccagcgaggagaatcagtttat 5156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 46236694 - 46236634
Alignment:
Q  486 ctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    |||||| | |||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  46236694 ctaatacgatgaaggagttaggagtgattttacctttctctgctggaggttttacaaaaat 46236634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 546
Target Start/End: Complemental strand, 47397220 - 47397148
Alignment:
Q  474 ggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    ||||||||  |||| ||||| |||||||||| ||||||||||||||||||||    |||||||||||||||||    
T  47397220 ggcttgaaacttctgatatgttgaaggagttaggagtgattttacctttctccctcggaggtttaacaaaaat 47397148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 471 - 546
Target Start/End: Complemental strand, 45883648 - 45883573
Alignment:
Q  471 ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    |||||||||||  |||||||||| |||||||||| |||||| ||| ||||||||||  |||| |||| ||||||||    
T  45883648 ttgggcttgaaacttctaatatgttgaaggagttaggagtggtttcacctttctctcgtggaagtttgacaaaaat 45883573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 311
Target Start/End: Complemental strand, 4614007 - 4613925
Alignment:
Q  229 aaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagca 311  Q
    ||||||||||||||||||||  | |||   ||||||||| |||||||||||| ||||||| | ||| ||||||||| ||||||    
T  4614007 aaggttcccttcatgactagttgtgaggagcagtttatcggtgtttttgatgattttaagattcttcgtcttccttttgagca 4613925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 546
Target Start/End: Original strand, 46532134 - 46532204
Alignment:
Q  476 cttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    ||||||||||||||| ||   |||||||| |||||  ||||||||||||||| ||||||||| ||||||||    
T  46532134 cttgaactttctaatgtgtcaaaggagttaggagttgttttacctttctctggtggaggtttgacaaaaat 46532204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 46544525 - 46544582
Alignment:
Q  328 cgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttga 385  Q
    ||| |||||||||| |||||||| ||||| | ||||||||||||||||| ||||||||    
T  46544525 cgttatttctctatttacttttttcttcctgatgcaaaagatgggttgttagctttga 46544582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 47414460 - 47414380
Alignment:
Q  123 actcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattt 203  Q
    |||||| |||||||||||||| ||||| ||||| |  ||| ||||||  ||||| ||||| |||||||||||||| |||||    
T  47414460 actcatctttgctaatgcactgtacttcaaaggggtgtggaatcaacaatttgatgcttcggaaacaaaagactacgattt 47414380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 546
Target Start/End: Original strand, 5160488 - 5160559
Alignment:
Q  475 gcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    |||||||  |||| |||||||||||||||| ||||||| |||||||||| ||  || |||||| ||||||||    
T  5160488 gcttgaaacttctgatatgctgaaggagttaggagtgactttacctttcactcgtgaaggtttgacaaaaat 5160559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 546
Target Start/End: Original strand, 16025694 - 16025769
Alignment:
Q  471 ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    ||||| |||||  |||| |||||||||||||| | |||||  ||||||||||||||  ||||||||| ||||||||    
T  16025694 ttgggtttgaaacttctgatatgctgaaggagcttggagtagttttacctttctctcctggaggtttgacaaaaat 16025769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 546
Target Start/End: Original strand, 46539211 - 46539282
Alignment:
Q  475 gcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    |||||||  |||||||||||| |||||| | ||| || |||||||||||||| | |||||||| ||||||||    
T  46539211 gcttgaaacttctaatatgcttaaggagctaggaatggttttacctttctctcaaggaggtttgacaaaaat 46539282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 46236868 - 46236796
Alignment:
Q  329 gtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaagtggcttc 401  Q
    |||| |||||||||||  |||| ||||| | ||||||||||||||||||| | ||| |||||||  |||||||    
T  46236868 gtcaattctctatgtatatttttcttccagatgcaaaagatgggttgtcaaccttggttgagaagctggcttc 46236796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 401
Target Start/End: Original strand, 17735779 - 17736053
Alignment:
Q  124 ctcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagct 223  Q
    ||||| ||||| |||||||||||||| ||||| |  ||| | | |||||||||  ||||| |||| || |||||||||||| |||||||  |||| |  |    
T  17735779 ctcatctttgcgaatgcactatacttcaaaggagtttggaaacgaccgtttgatacttcaaaaacgaaggactatgattttgaccttctcaatggcaagt 17735878  T
Q  224 cattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagcatggtactataga 323  Q
    || | ||||||||||| ||||| |||| | | | |||||||||||||  ||||||||||||||| |||||||||||||||||  | || || | |   ||    
T  17735879 cagtaaaggttccctttatgaccagcaagaataatcagtttatcagttcttttgatggttttaaagtccttggtcttccttacaaacaaggcaat---ga 17735975  T
Q  324 tgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaagtggcttc 401  Q
    | | |||   |||||||| |||||||| ||||| |  | ||||||||||||||||||||||||||| ||||| |||||    
T  17735976 taagcgtgcattctctatttacttttttcttcctgacgaaaaagatgggttgtcagctttgattgataaagtagcttc 17736053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 389
Target Start/End: Original strand, 17708125 - 17708387
Alignment:
Q  124 ctcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagct 223  Q
    ||||| ||||||||||||||||| || ||||| |  ||||| | |||||||||  ||||| |||| || |||||||||||| |||||||  |||| |  |    
T  17708125 ctcatatttgctaatgcactatatttcaaaggagtttggcaacgaccgtttgatacttcaaaaacgaaggactatgattttgaccttctcaatggcaagt 17708224  T
Q  224 cattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagcatggtactataga 323  Q
    || | ||||||||||| ||||| |||| | |   |||||||||||||  ||||||||||||||| || ||||||||||||||  | || || | |    |    
T  17708225 cagtaaaggttccctttatgaccagcaagaatgatcagtttatcagttcttttgatggttttaaagttcttggtcttccttacaaacaaggcaat---ta 17708321  T
Q  324 tgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattga 389  Q
    ||  |||   ||||| || |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  17708322 tgggcgtgcattctccatttacttttttcttcccgatgcaaaagatgggttgtcagctttgattga 17708387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 130 - 389
Target Start/End: Original strand, 17717955 - 17718211
Alignment:
Q  130 tttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagctcattca 229  Q
    ||||| ||||||||||| || ||||| |  ||| | ||||| |||||  ||||| |||| || |||||||||||| |||||||  |||| |  ||| | |    
T  17717955 tttgcaaatgcactatatttcaaaggagtgtggaaacaaccctttgatacttcaaaaacgaaggactatgattttgaccttctcaatggcaagtcagtaa 17718054  T
Q  230 aggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagcatggtactatagatgaccg 329  Q
    |||||||||| ||||| |||| | |   |||||||||||||  ||||||||||||||| || ||||||||||||||  | || || | |    |||  ||    
T  17718055 aggttccctttatgaccagcaagaatgatcagtttatcagttcttttgatggttttaaagttcttggtcttccttacaaacaaggcaat---tatgggcg 17718151  T
Q  330 tcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattga 389  Q
    |   ||||| || |||||||| ||||||| |||||||||||||||||| |||||||||||    
T  17718152 tgcattctccatttacttttttcttcccgatgcaaaagatgggttgtccgctttgattga 17718211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 401
Target Start/End: Original strand, 17744966 - 17745233
Alignment:
Q  130 tttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagctcattca 229  Q
    |||||||||||||||||||| ||||| | |||| | |||  ||||||  ||||| |||| || |||||||||||| |||||||  | || |  ||| | |    
T  17744966 tttgctaatgcactatacttcaaaggagtatggaaacaaaagtttgatacttcaaaaacgaaggactatgattttgaccttcttaacggcaagtcagtaa 17745065  T
Q  230 aggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagcatggtactatagatgaccg 329  Q
    |||||||||| ||||| |||| | |   |||||||||||||   || ||||||||||| ||||||||||||||| || | || || |    |||||  ||    
T  17745066 aggttccctttatgaccagcaagaatgatcagtttatcagttcgttagatggttttaaagtccttggtcttcct-ataaacaaggcaa---agatgggcg 17745161  T
Q  330 tcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaagtggcttc 401  Q
    |   |||||||| |||||||| ||||| |  | ||||||||| ||||||||||||||||| ||||| |||||    
T  17745162 tgcattctctatttacttttttcttcctgacgaaaaagatggtttgtcagctttgattgataaagtagcttc 17745233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 401
Target Start/End: Original strand, 16722002 - 16722276
Alignment:
Q  124 ctcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagct 223  Q
    ||||| ||||||||||||||||| || ||||| |  ||| | |||| ||| ||  || || |||| || |||||||||||| |||||||  |||| |  |    
T  16722002 ctcatctttgctaatgcactatatttcaaaggagtgtggaaacaacagttcgatactacaaaaacgaaggactatgattttgaccttctcaatggcaagt 16722101  T
Q  224 cattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagcatggtactataga 323  Q
    || | |||||||| || ||||| |||| | |   |||||||||||||   || ||||||||||| |||||||||||||||||| | || ||    | |||    
T  16722102 cagtaaaggttccatttatgaccagcaagaatgatcagtttatcagttcgttagatggttttaaagtccttggtcttccttataaacaagg---caaaga 16722198  T
Q  324 tgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaagtggcttc 401  Q
    ||| |||   |||||||| |||||||| ||||| |    ||||||||||||||||  ||||||||| ||||| |||||    
T  16722199 tgaacgtgcattctctatttacttttttcttcctgacaaaaaagatgggttgtcaaatttgattgataaagtagcttc 16722276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 401
Target Start/End: Original strand, 17699016 - 17699290
Alignment:
Q  124 ctcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtagct 223  Q
    ||||| ||||||||||||||||| || ||||| |  ||| | |||| ||| ||  || || |||| || |||||||||||| |||||||  |||| |  |    
T  17699016 ctcatctttgctaatgcactatatttcaaaggagtgtggaaacaacagttcgatactacaaaaacgaaggactatgattttgaccttctcaatggcaagt 17699115  T
Q  224 cattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtccttggtcttccttatgagcatggtactataga 323  Q
    || | |||||||| || ||||| |||| | |   |||||||||||||   || ||||||||||| |||||||||||||||||| | || ||    | |||    
T  17699116 cagtaaaggttccatttatgaccagcaagaatgatcagtttatcagttcgttagatggttttaaagtccttggtcttccttataaacaagg---caaaga 17699212  T
Q  324 tgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaagtggcttc 401  Q
    ||| |||   |||||||| |||||||| ||||| |    ||||||||||||||||  ||||||||| ||||| |||||    
T  17699213 tgaacgtgcattctctatttacttttttcttcctgacaaaaaagatgggttgtcaaatttgattgataaagtagcttc 17699290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 401
Target Start/End: Original strand, 35162361 - 35162564
Alignment:
Q  194 actatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggttttaaggtcct 293  Q
    |||||||||||||||||||  |||| |||||| ||||||||||||||||||||| ||       ||||||||| || | ||||||||||||||| || ||    
T  35162361 actatgattttcaccttctgaatggaagctcagtcaaggttcccttcatgactaccaaccttgatcagtttattagagcttttgatggttttaaagttct 35162460  T
Q  294 tggtcttccttatgagcatggtactatagatgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaa 393  Q
    | ||||||||||| |||| ||    | |||||| ||  | |||||||||||| |||| |||||   ||||||||||||  ||||||||||| |||||||     
T  35162461 tcgtcttccttataagcaagg---aaaagatgagcggaaattctctatgtacatttt-cttccaaatgcaaaagatggcctgtcagctttggttgagaag 35162556  T
Q  394 gtggcttc 401  Q
    ||||||||    
T  35162557 gtggcttc 35162564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 15555862 - 15555976
Alignment:
Q  122 gactcatttttgctaatgcactatactttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttcaccttctagatggtag 221  Q
    ||||||| ||||| |||||||| |||||||||||   |||| ||||   |||||| |||||  |||| |||||||||||||||||||||||  |||||||    
T  15555862 gactcatctttgcaaatgcactgtactttaaaggactatggtatcagaagtttgatgcttccaaaacgaaagactatgattttcaccttctcaatggtag 15555961  T
Q  222 ctcattcaaggttcc 236  Q
    |||| ||||||||||    
T  15555962 ctcactcaaggttcc 15555976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 401
Target Start/End: Original strand, 35155333 - 35155544
Alignment:
Q  187 acaaaagactatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggtttta 286  Q
    |||||| | |||||||||||||||||  |||| |||||| ||||||||||||||||||| |||||      ||| ||||| || | ||||||||||||||    
T  35155333 acaaaaaaatatgattttcaccttctgaatggcagctcagtcaaggttcccttcatgaccagcagccttgatcaatttattagagcttttgatggtttta 35155432  T
Q  287 aggtccttggtcttccttatgagcatggtactatagatgaccgtcatttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgat 386  Q
    | || ||| ||||||| ||| |||| ||    | |||||| ||  | |||||||||||| |||| |||||   ||||||||||||  | ||||||||| |    
T  35155433 aagttcttcgtcttccgtataagcaagg---aaaagatgagcggaaattctctatgtacatttttcttccaaatgcaaaagatggactatcagctttggt 35155529  T
Q  387 tgagaaagtggcttc 401  Q
    |||||| ||||||||    
T  35155530 tgagaaggtggcttc 35155544  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 546
Target Start/End: Original strand, 35162669 - 35162723
Alignment:
Q  492 tgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    ||||||||||  | |||||||||||||||||||||  ||||||||| ||||||||    
T  35162669 tgctgaaggatctaggagtgattttacctttctcttctggaggtttgacaaaaat 35162723  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 306
Target Start/End: Complemental strand, 21464400 - 21464281
Alignment:
Q  187 acaaaagactatgattttcaccttctagatggtagctcattcaaggttcccttcatgactagcagggagagtcagtttatcagtgtttttgatggtttta 286  Q
    |||| |||||| ||||||||| ||||  |||||||| |  |||||||||| |||||||| |||   | ||  |||| |||||||||| ||||||||||||    
T  21464400 acaagagactacgattttcacattcttaatggtagcccggtcaaggttcctttcatgaccagctatgtgatgcagtatatcagtgttcttgatggtttta 21464301  T
Q  287 aggtccttggtcttccttat 306  Q
    | |||||| |||||||||||    
T  21464300 aagtccttcgtcttccttat 21464281  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 546
Target Start/End: Complemental strand, 9675611 - 9675536
Alignment:
Q  471 ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    |||||||||||  ||||   ||| |||||||| | |||||||||||||||||||||  ||||||||| ||||||||    
T  9675611 ttgggcttgaaacttctcgaatgatgaaggagctaggagtgattttacctttctcttctggaggtttgacaaaaat 9675536  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 546
Target Start/End: Complemental strand, 9692633 - 9692558
Alignment:
Q  471 ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    |||||||||||  ||||  ||||  ||||||||| ||||||| |||||||||||||  ||||||||| ||||||||    
T  9692633 ttgggcttgaaacttctcgtatgacgaaggagttaggagtgagtttacctttctcttctggaggtttgacaaaaat 9692558  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 546
Target Start/End: Complemental strand, 21464105 - 21464030
Alignment:
Q  471 ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat 546  Q
    |||||||||||  |||| |||||||||| ||| | || ||| |||||||||||||||| |||| ||| ||||||||    
T  21464105 ttgggcttgaatgttctgatatgctgaaagagctaggcgtggttttacctttctctgaaggagctttgacaaaaat 21464030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 21464256 - 21464188
Alignment:
Q  334 ttctctatgtactttttacttcccgttgcaaaagatgggttgtcagctttgattgagaaagtggcttcc 402  Q
    ||||| || |||||||| ||||| | |||||||||||| |||| |||||||||| |||| || ||||||    
T  21464256 ttctcaatttacttttttcttcctgatgcaaaagatggattgttagctttgattaagaaggttgcttcc 21464188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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