View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18593_high_22 (Length: 276)
Name: NF18593_high_22
Description: NF18593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18593_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 16 - 259
Target Start/End: Complemental strand, 7330347 - 7330104
Alignment:
| Q |
16 |
atagagcatgtgaccggagagagcaaaaaagaaaagattcgcgttggaatggattcggtcattcataaaattcctcaaggacaagagatatcagatggat |
115 |
Q |
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| T |
7330347 |
atagagcatgtgaccggagagagcaaaaaagaaaagattcgcgttggaatggattcggtcattcataaaattcctcaaggacaagagatatcagatggat |
7330248 |
T |
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| Q |
116 |
tgaagaaagaaattttgaagaaattgactgaccctattatcattcctagagaaaatcaatacaagagttccttaagaagaatcaaatctcttcaagaatt |
215 |
Q |
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| T |
7330247 |
tgaagaaagaaattttgaagaaattgactgaccctattatcattcctagagaaaatcaatacaagagttccttaagaagaatcaaatctcttcaagaatt |
7330148 |
T |
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| Q |
216 |
actagaaagttaccctcaatttgaggaaccaaaattagaaaaag |
259 |
Q |
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| T |
7330147 |
actagaaagttaccctcaatttgaggaaccaaaattagaaaaag |
7330104 |
T |
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