View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18593_high_34 (Length: 218)
Name: NF18593_high_34
Description: NF18593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18593_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 30555768 - 30555954
Alignment:
| Q |
15 |
aatatgtacaaattaattaatctcacatacctttgcttcacaatagttgtcgtggtatcccaattcttttcttgaaacttcacctgctaggtactcagaa |
114 |
Q |
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| T |
30555768 |
aatatgtacaaattaattaatctcacatacctttgcttcacaatagttgtcgtggtatcccaattcttttcttgaaacttcacctgctaagtattcagaa |
30555867 |
T |
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| Q |
115 |
tctttacatggcctgaaagaatttgctacatccttgttgatgcaaattttcgacattggcacttccgatattgtcagaagaaatgac |
201 |
Q |
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| T |
30555868 |
tctttacatggcctgaaagaatttgctacatccttgttgatgcaaattttcgacattggcacttccgatattgtcagaagaaatgac |
30555954 |
T |
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