View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18593_low_17 (Length: 335)

Name: NF18593_low_17
Description: NF18593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18593_low_17
NF18593_low_17
[»] chr6 (6 HSPs)
chr6 (100-189)||(32559114-32559202)
chr6 (214-248)||(12359034-12359068)
chr6 (214-248)||(20059751-20059785)
chr6 (214-248)||(20112023-20112057)
chr6 (214-248)||(22802920-22802954)
chr6 (214-248)||(25734738-25734772)
[»] scaffold1260 (1 HSPs)
scaffold1260 (214-257)||(2091-2133)
[»] scaffold0607 (1 HSPs)
scaffold0607 (214-249)||(7720-7755)
[»] chr8 (8 HSPs)
chr8 (214-249)||(23184563-23184598)
chr8 (214-248)||(3597684-3597718)
chr8 (214-248)||(19225874-19225908)
chr8 (214-248)||(19419341-19419375)
chr8 (214-248)||(21289164-21289198)
chr8 (214-248)||(30324557-30324591)
chr8 (215-248)||(20381707-20381740)
chr8 (214-242)||(19927847-19927875)
[»] chr7 (7 HSPs)
chr7 (213-248)||(4822229-4822264)
chr7 (214-248)||(332448-332482)
chr7 (214-248)||(9160693-9160727)
chr7 (214-248)||(13259953-13259987)
chr7 (214-248)||(15887586-15887620)
chr7 (214-248)||(18420113-18420147)
chr7 (214-248)||(22577347-22577381)
[»] scaffold1948 (1 HSPs)
scaffold1948 (214-248)||(230-264)
[»] scaffold1002 (1 HSPs)
scaffold1002 (214-248)||(3178-3212)
[»] scaffold0414 (1 HSPs)
scaffold0414 (214-248)||(6408-6442)
[»] scaffold0315 (1 HSPs)
scaffold0315 (214-248)||(18715-18749)
[»] scaffold0269 (1 HSPs)
scaffold0269 (214-248)||(8116-8150)
[»] scaffold0207 (1 HSPs)
scaffold0207 (214-248)||(21446-21480)
[»] scaffold0203 (1 HSPs)
scaffold0203 (214-248)||(23394-23428)
[»] scaffold0173 (1 HSPs)
scaffold0173 (214-248)||(24635-24669)
[»] scaffold0056 (1 HSPs)
scaffold0056 (214-248)||(34083-34117)
[»] scaffold0011 (1 HSPs)
scaffold0011 (214-248)||(134665-134699)
[»] scaffold0004 (1 HSPs)
scaffold0004 (214-248)||(30148-30182)
[»] chr5 (7 HSPs)
chr5 (214-248)||(1110041-1110075)
chr5 (214-248)||(20561657-20561691)
chr5 (214-248)||(23405788-23405822)
chr5 (214-248)||(24927036-24927070)
chr5 (214-248)||(30743808-30743842)
chr5 (214-242)||(20797040-20797068)
chr5 (234-281)||(25935531-25935579)
[»] chr4 (2 HSPs)
chr4 (214-248)||(13004176-13004210)
chr4 (215-248)||(15474461-15474494)
[»] chr3 (5 HSPs)
chr3 (214-248)||(7803758-7803792)
chr3 (214-248)||(15834294-15834328)
chr3 (214-248)||(17909255-17909289)
chr3 (214-248)||(22141548-22141582)
chr3 (216-248)||(18140855-18140887)
[»] chr2 (3 HSPs)
chr2 (214-248)||(21171682-21171716)
chr2 (214-248)||(22454260-22454294)
chr2 (214-248)||(28731145-28731179)
[»] chr1 (3 HSPs)
chr1 (214-248)||(7680149-7680183)
chr1 (214-248)||(20953701-20953735)
chr1 (214-248)||(36134927-36134961)


Alignment Details
Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 32559202 - 32559114
Alignment:
Q  100 attgttttgcacttgtcatctcacaaatttttggttttgtaactactttatgcttgtttaaaacagcattctgcttctgaatgaatgatt 189  Q
    ||||||||||||||||||| | ||||| ||| ||||||||||||| ||| |||||| ||||||||  ||| ||||| |||||||||||||    
T  32559202 attgttttgcacttgtcatttgacaaacttt-ggttttgtaactaatttttgcttgcttaaaacaatattttgcttatgaatgaatgatt 32559114  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 12359068 - 12359034
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  12359068 tttttgttgatgacaaaagggggagtagatgtata 12359034  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 20059751 - 20059785
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  20059751 tttttgttgatgacaaaagggggagtagatgtata 20059785  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 20112023 - 20112057
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  20112023 tttttgttgatgacaaaagggggagtagatgtata 20112057  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 22802954 - 22802920
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  22802954 tttttgttgatgacaaaagggggagtagatgtata 22802920  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 25734738 - 25734772
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    |||||||||||||||||||||||||||| ||||||    
T  25734738 tttttgttgatgacaaaagggggagtagtagtata 25734772  T

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Target: scaffold1260 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1260
Description:

Target: scaffold1260; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 2091 - 2133
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtataagtatttaa 257  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  2091 tttttgttgatgacaaaagggggagtagatgtat-agtatttaa 2133  T

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Target: scaffold0607 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 249
Target Start/End: Complemental strand, 7755 - 7720
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtataa 249  Q
    ||||||||||||||||||||||||||||| ||||||    
T  7755 tttttgttgatgacaaaagggggagtagatgtataa 7720  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 249
Target Start/End: Original strand, 23184563 - 23184598
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtataa 249  Q
    ||||||||||||||||||||||||||||| ||||||    
T  23184563 tttttgttgatgacaaaagggggagtagatgtataa 23184598  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 3597684 - 3597718
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  3597684 tttttgttgatgacaaaagggggagtagatgtata 3597718  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 19225908 - 19225874
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  19225908 tttttgttgatgacaaaagggggagtagatgtata 19225874  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 19419375 - 19419341
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  19419375 tttttgttgatgacaaaagggggagtagatgtata 19419341  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 21289198 - 21289164
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  21289198 tttttgttgatgacaaaagggggagtagatgtata 21289164  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 30324557 - 30324591
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  30324557 tttttgttgatgacaaaagggggagtagatgtata 30324591  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 20381707 - 20381740
Alignment:
Q  215 ttttgttgatgacaaaagggggagtagaagtata 248  Q
    |||||||||||||||||||||||||||| |||||    
T  20381707 ttttgttgatgacaaaagggggagtagatgtata 20381740  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 242
Target Start/End: Complemental strand, 19927875 - 19927847
Alignment:
Q  214 tttttgttgatgacaaaagggggagtaga 242  Q
    |||||||||||||||||||||||||||||    
T  19927875 tttttgttgatgacaaaagggggagtaga 19927847  T

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Target: chr7 (Bit Score: 32; Significance: 0.000000007; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 4822264 - 4822229
Alignment:
Q  213 gtttttgttgatgacaaaagggggagtagaagtata 248  Q
    |||||||||||||||||||||||||||||| |||||    
T  4822264 gtttttgttgatgacaaaagggggagtagatgtata 4822229  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 332482 - 332448
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  332482 tttttgttgatgacaaaagggggagtagatgtata 332448  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 9160727 - 9160693
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  9160727 tttttgttgatgacaaaagggggagtagatgtata 9160693  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 13259953 - 13259987
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  13259953 tttttgttgatgacaaaagggggagtagatgtata 13259987  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 15887586 - 15887620
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  15887586 tttttgttgatgacaaaagggggagtagatgtata 15887620  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 18420147 - 18420113
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    |||||||||||||||||||||||||||||| ||||    
T  18420147 tttttgttgatgacaaaagggggagtagaaatata 18420113  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 22577347 - 22577381
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  22577347 tttttgttgatgacaaaagggggagtagatgtata 22577381  T

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Target: scaffold1948 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1948
Description:

Target: scaffold1948; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 264 - 230
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  264 tttttgttgatgacaaaagggggagtagatgtata 230  T

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Target: scaffold1002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 3178 - 3212
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  3178 tttttgttgatgacaaaagggggagtagatgtata 3212  T

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Target: scaffold0414 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 6408 - 6442
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  6408 tttttgttgatgacaaaagggggagtagatgtata 6442  T

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Target: scaffold0315 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 18749 - 18715
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  18749 tttttgttgatgacaaaagggggagtagatgtata 18715  T

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Target: scaffold0269 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 8150 - 8116
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  8150 tttttgttgatgacaaaagggggagtagatgtata 8116  T

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Target: scaffold0207 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 21480 - 21446
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  21480 tttttgttgatgacaaaagggggagtagatgtata 21446  T

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Target: scaffold0203 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 23394 - 23428
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  23394 tttttgttgatgacaaaagggggagtagatgtata 23428  T

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Target: scaffold0173 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 24635 - 24669
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  24635 tttttgttgatgacaaaagggggagtagatgtata 24669  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 34083 - 34117
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  34083 tttttgttgatgacaaaagggggagtagatgtata 34117  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 134665 - 134699
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  134665 tttttgttgatgacaaaagggggagtagatgtata 134699  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 30148 - 30182
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  30148 tttttgttgatgacaaaagggggagtagatgtata 30182  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 1110075 - 1110041
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  1110075 tttttgttgatgacaaaagggggagtagatgtata 1110041  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 20561657 - 20561691
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  20561657 tttttgttgatgacaaaagggggagtagatgtata 20561691  T

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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 23405788 - 23405822
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  23405788 tttttgttgatgacaaaagggggagtagatgtata 23405822  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 24927070 - 24927036
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  24927070 tttttgttgatgacaaaagggggagtagatgtata 24927036  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 30743842 - 30743808
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  30743842 tttttgttgatgacaaaagggggagtagatgtata 30743808  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 242
Target Start/End: Original strand, 20797040 - 20797068
Alignment:
Q  214 tttttgttgatgacaaaagggggagtaga 242  Q
    |||||||||||||||||||||||||||||    
T  20797040 tttttgttgatgacaaaagggggagtaga 20797068  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 281
Target Start/End: Original strand, 25935531 - 25935579
Alignment:
Q  234 gggagtagaagtataagtatttaa-gttctgagtctaaacgtaaaaaga 281  Q
    |||||||| ||||||||||||||| || ||||||||||||| |||||||    
T  25935531 gggagtagtagtataagtatttaaggtcctgagtctaaacgcaaaaaga 25935579  T

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Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 13004176 - 13004210
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  13004176 tttttgttgatgacaaaagggggagtagatgtata 13004210  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 15474461 - 15474494
Alignment:
Q  215 ttttgttgatgacaaaagggggagtagaagtata 248  Q
    |||||||||||||||||||||||||||| |||||    
T  15474461 ttttgttgatgacaaaagggggagtagatgtata 15474494  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 7803758 - 7803792
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  7803758 tttttgttgatgacaaaagggggagtagatgtata 7803792  T

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Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 15834328 - 15834294
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  15834328 tttttgttgatgacaaaagggggagtagatgtata 15834294  T

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Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 17909255 - 17909289
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  17909255 tttttgttgatgacaaaagggggagtagatgtata 17909289  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 22141582 - 22141548
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  22141582 tttttgttgatgacaaaagggggagtagatgtata 22141548  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 18140855 - 18140887
Alignment:
Q  216 tttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||| |||||    
T  18140855 tttgttgatgacaaaagggggagtagatgtata 18140887  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 21171682 - 21171716
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  21171682 tttttgttgatgacaaaagggggagtagatgtata 21171716  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 22454260 - 22454294
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  22454260 tttttgttgatgacaaaagggggagtagatgtata 22454294  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 28731145 - 28731179
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  28731145 tttttgttgatgacaaaagggggagtagatgtata 28731179  T

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Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 7680183 - 7680149
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  7680183 tttttgttgatgacaaaagggggagtagatgtata 7680149  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 20953701 - 20953735
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  20953701 tttttgttgatgacaaaagggggagtagatgtata 20953735  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 36134961 - 36134927
Alignment:
Q  214 tttttgttgatgacaaaagggggagtagaagtata 248  Q
    ||||||||||||||||||||||||||||| |||||    
T  36134961 tttttgttgatgacaaaagggggagtagatgtata 36134927  T

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