View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18595_low_9 (Length: 202)
Name: NF18595_low_9
Description: NF18595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18595_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 8658436 - 8658263
Alignment:
| Q |
11 |
tgagatgaaacataatccccatgtctggtaggaaaccagcacagaatagtgaggtcattccaacgacacaaaatagccaagtatagatggtaggcccatc |
110 |
Q |
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| T |
8658436 |
tgagaagaaacataatccccatgtctggtaggaaaccagcacagaatagtgaggtcattccaacgacacaaaatagccaagtatagatggtaggcccatc |
8658337 |
T |
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| Q |
111 |
cagaatttgccttttcctctgtttccagtaagatatggtagaatccatcccctctcgcgaggtcaccatgggaa |
184 |
Q |
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| T |
8658336 |
cagaatttgccttttcctctgtttccagtaagatatggtagaatccatcccctctcgcgaggtcaccatgggaa |
8658263 |
T |
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