View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18596_low_8 (Length: 339)
Name: NF18596_low_8
Description: NF18596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18596_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 32046786 - 32047111
Alignment:
| Q |
1 |
aatttccattaccagaatccatcttctcaatcatcttcgccaaagcataaaacgcactctttaccgaaccagaacccgtcactgacgaccccatctccgg |
100 |
Q |
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| T |
32046786 |
aatttccattaccagaatccatcttctcaatcatcttcgccaaagcataaaacgcactctttaccgaaccagaacccgtcactgacgaccccatctccgg |
32046885 |
T |
|
| Q |
101 |
catagtttcttccaaacacaacacatgctcttgccccgcagctaccaaacacttcaacaaaaacaaattctccgaatccaactgaagcgtcgataaaacc |
200 |
Q |
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| T |
32046886 |
catagtttcttccaaacacaacacatgctcttgccccgcagctaccaaacacttcaacaaaaacaaattctccgaatccaactgaagcgtcgataaaacc |
32046985 |
T |
|
| Q |
201 |
ctagctagtccagcatttctggaagaggaaccgaagaaacgtcttactctgtaatcagcgttgatgattcgaagcttgtcgttgatagtatcgcaggcgg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32046986 |
ctagctagtccagcatttctggaagaggaaccgaagaaacgtcttactctgtaatcagcgttgatgattcgaagcttgtcgttgatagtatcgcaggcgg |
32047085 |
T |
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| Q |
301 |
cgagcttatctcggagggaggtaagt |
326 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32047086 |
cgagcttatctcggagggaggtaagt |
32047111 |
T |
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