View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18597_high_21 (Length: 272)
Name: NF18597_high_21
Description: NF18597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18597_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 253
Target Start/End: Original strand, 9604931 - 9605176
Alignment:
| Q |
13 |
aatatactaattagaaacactttaaagatcctaccc-aagttttcacatacacgtgg-catctcttaaatataagttgatcttgtacatgtaagaattaa |
110 |
Q |
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| T |
9604931 |
aatatactaatgagaaacactttaaagatcctaccccaagttttcacatacacgtgggcatctctcaaatataagttgattttgtacatgtaagaattaa |
9605030 |
T |
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| Q |
111 |
taacttggtcagaaaagcaagatgatatataagctttact-aaacactttgttagcaccctcaattc--atatatataaaaaatgtcccacgatcatggg |
207 |
Q |
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| T |
9605031 |
taacttggtcagaaaagcaagatgatatataagctttactcaaacactttgttagcaccttcaattcatatatatatataaaatgtcacacgatcatggg |
9605130 |
T |
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| Q |
208 |
tccaaaaaacttgagtacgtgggctatataatgctaggcatatgca |
253 |
Q |
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| T |
9605131 |
tccaaaaaacttgagtacgtgggctatataatgctaggcatatgca |
9605176 |
T |
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