View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18597_low_21 (Length: 355)
Name: NF18597_low_21
Description: NF18597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18597_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 40447530 - 40447325
Alignment:
| Q |
1 |
ttctcagtcctcttgctccttctccttctccgtcgtcgacgccggtgaataatggtgttttgtctttgcctgcgcctgaatgggcttctacatcgaaccg |
100 |
Q |
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| T |
40447530 |
ttctcagtcctcttgctccttctccttctccggcgtcgacgccggtgaataatggtgttttgtctttgcctgcgcctgaatgggcttctacatcgaaccg |
40447431 |
T |
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| Q |
101 |
gttgaataaaagtgttagctttagtcttaagggttgtaagcagttttggaaagccggtgattatggtggttctcctgctcgtgccttcgaatcttcaacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40447430 |
gttgaataaaagtgttagctttagtcttaagggttgtaagcagttttggaaagccggtgattatggtggttctcctgctcgtgccttcgaatcttcaacc |
40447331 |
T |
|
| Q |
201 |
ggtaac |
206 |
Q |
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|||||| |
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| T |
40447330 |
ggtaac |
40447325 |
T |
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