View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18597_low_4 (Length: 553)

Name: NF18597_low_4
Description: NF18597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18597_low_4
NF18597_low_4
[»] chr2 (7 HSPs)
chr2 (71-308)||(18929651-18929887)
chr2 (132-312)||(17403198-17403377)
chr2 (96-215)||(26651281-26651400)
chr2 (7-67)||(18929483-18929543)
chr2 (160-280)||(25519999-25520118)
chr2 (7-67)||(19879057-19879117)
chr2 (136-192)||(29890937-29890993)
[»] chr3 (12 HSPs)
chr3 (135-313)||(9033046-9033225)
chr3 (94-283)||(4765286-4765475)
chr3 (99-312)||(4770096-4770307)
chr3 (96-214)||(24698727-24698845)
chr3 (135-215)||(15687340-15687420)
chr3 (120-213)||(16242605-16242699)
chr3 (97-215)||(29614037-29614155)
chr3 (94-202)||(4832190-4832300)
chr3 (7-67)||(7148945-7149005)
chr3 (11-67)||(29614512-29614568)
chr3 (132-215)||(13428406-13428488)
chr3 (8-67)||(15687107-15687166)
[»] chr4 (2 HSPs)
chr4 (73-216)||(11362017-11362160)
chr4 (171-249)||(10071001-10071078)
[»] chr6 (9 HSPs)
chr6 (99-312)||(17525233-17525444)
chr6 (154-282)||(31125745-31125872)
chr6 (135-309)||(22394009-22394179)
chr6 (131-215)||(16177672-16177759)
chr6 (8-67)||(16177460-16177519)
chr6 (97-174)||(1176918-1176994)
chr6 (8-67)||(31126065-31126124)
chr6 (118-204)||(32784447-32784534)
chr6 (8-68)||(15830178-15830238)
[»] chr8 (7 HSPs)
chr8 (71-327)||(28371450-28371705)
chr8 (98-216)||(23539981-23540099)
chr8 (135-213)||(10662109-10662187)
chr8 (7-67)||(28371281-28371341)
chr8 (135-312)||(16600980-16601159)
chr8 (172-312)||(22713164-22713303)
chr8 (171-247)||(24092825-24092900)
[»] chr5 (16 HSPs)
chr5 (78-285)||(20064063-20064265)
chr5 (96-216)||(25951664-25951783)
chr5 (96-215)||(20058300-20058418)
chr5 (118-216)||(21165557-21165655)
chr5 (96-218)||(23209772-23209893)
chr5 (96-215)||(20061207-20061323)
chr5 (10-67)||(20713386-20713443)
chr5 (171-215)||(19217727-19217771)
chr5 (96-169)||(20713575-20713647)
chr5 (8-68)||(23210024-23210084)
chr5 (134-242)||(24878782-24878889)
chr5 (171-246)||(17987914-17987988)
chr5 (8-59)||(20064388-20064439)
chr5 (136-246)||(22011479-22011588)
chr5 (11-65)||(25951474-25951528)
chr5 (15-67)||(20058550-20058602)
[»] chr1 (8 HSPs)
chr1 (75-212)||(20146549-20146686)
chr1 (94-215)||(11013493-11013614)
chr1 (134-327)||(22619579-22619770)
chr1 (20-67)||(11013745-11013792)
chr1 (20-67)||(33103226-33103273)
chr1 (134-216)||(17615684-17615766)
chr1 (159-215)||(13232414-13232470)
chr1 (7-67)||(20146377-20146437)
[»] scaffold0555 (2 HSPs)
scaffold0555 (75-208)||(5337-5470)
scaffold0555 (7-67)||(5582-5642)
[»] chr7 (11 HSPs)
chr7 (135-228)||(2545771-2545864)
chr7 (75-216)||(20146231-20146371)
chr7 (71-213)||(14986744-14986882)
chr7 (71-213)||(15416355-15416493)
chr7 (96-215)||(4173104-4173222)
chr7 (7-67)||(20146059-20146119)
chr7 (10-67)||(2547158-2547215)
chr7 (181-217)||(2563197-2563233)
chr7 (8-67)||(14986989-14987048)
chr7 (8-67)||(15416600-15416659)
chr7 (136-192)||(10648940-10648996)
[»] scaffold0795 (2 HSPs)
scaffold0795 (71-215)||(5725-5869)
scaffold0795 (7-67)||(5971-6031)
[»] scaffold0002 (2 HSPs)
scaffold0002 (159-312)||(373696-373847)
scaffold0002 (20-67)||(374041-374088)
[»] scaffold0161 (1 HSPs)
scaffold0161 (96-208)||(5276-5388)
[»] scaffold0264 (2 HSPs)
scaffold0264 (94-205)||(21225-21337)
scaffold0264 (8-67)||(21038-21097)


Alignment Details
Target: chr2 (Bit Score: 146; Significance: 1e-76; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 71 - 308
Target Start/End: Original strand, 18929651 - 18929887
Alignment:
Q  71 ctttaaggcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaacc 170  Q
    |||||||| ||||||||||||  ||||||||||||| ||||  | ||||||||||| ||||| ||||| |||||||||||||||||||||||| |||||     
T  18929651 ctttaaggattcgagactttttcatgctaagtccaaaatcttgtcgaaactcctttaattgaggaaaatacttcaattcctgcaagagtaaaagtcaact 18929750  T
Q  171 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattg 270  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||| |||||||||| ||||||| |||| |||||||||||    
T  18929751 aatgttcaccacattaaatgaggttggtgaaaataccagctaacaaatttcccctcaa-aaatgtcattttcgactgaatatattcaaaggagagaattg 18929849  T
Q  271 acatttttgagaaaacgctaagtatttcaaagcatgat 308  Q
    |||||||||||||||| |||||||||||||||||||||    
T  18929850 acatttttgagaaaactctaagtatttcaaagcatgat 18929887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 17403198 - 17403377
Alignment:
Q  132 aagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaa 231  Q
    ||||||||||||||||| ||||||  |||||| | ||| |||||||||||||||||||||||||||| ||| |||||||||| ||||| |||   || ||    
T  17403198 aagaaaagacttcaattgctgcaaaggtaaaagttaactaatgttgaccacattaaatgaggctggtaaaattaccagctaaaaaatttcccaaaaaaaa 17403297  T
Q  232 atgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtca 312  Q
    |||||||||| |||  || ||  || | |||||  |||||||||||| || |||| |||||||||||||||||||||||||    
T  17403298 atgccatttttgactaaagattttcgaaggagaagattgacatttttcag-aaactctaagtatttcaaagcatgatgtca 17403377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 26651281 - 26651400
Alignment:
Q  96 gctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct 195  Q
    |||||||||||||| || ||||||||||||   |||||||||| ||||| ||| |||||||||||||| ||||| ||| |||||||||||||||||||||    
T  26651281 gctaagtccaacatatcgttgaaactccttaagttgaagaaaaaacttcgatttctgcaagagtaaaagtcaactaatattgaccacattaaatgaggct 26651380  T
Q  196 ggtgaaaataccagctaaca 215  Q
    ||||||| |||| |||||||    
T  26651381 ggtgaaattacctgctaaca 26651400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 18929483 - 18929543
Alignment:
Q  7 ttggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||||||| |||||||| |||| |||| ||||||||||||||| |||||||||||||    
T  18929483 ttggaaagaaactaatcccacgatcaacactccttccatgtagacaaccgcttgtctccca 18929543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 160 - 280
Target Start/End: Complemental strand, 25520118 - 25519999
Alignment:
Q  160 aaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaac 259  Q
    |||| ||||| |||||||||  ||||||||  | ||  |||||||||   ||||||||||||| ||||| |||||||||||||||| |||||||||| |     
T  25520118 aaaagtcaactaatgttgactgcattaaattggccttttgaaaatacagcctaacaaattgccacccaa-aaatgccattttcgactgaatataatcgaa 25520020  T
Q  260 ggagagaattgacatttttga 280  Q
    ||||| ||||| |||||||||    
T  25520019 ggagataattggcatttttga 25519999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 19879057 - 19879117
Alignment:
Q  7 ttggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||||||| |||||||| |||| |||| ||  ||||| |||||||||||||||||||    
T  19879057 ttggaaagaaactaatcccacgatcaacactcctctcatgttgacaaacgcttgtctccca 19879117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 29890993 - 29890937
Alignment:
Q  136 aaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgag 192  Q
    ||||||||| | ||||||||   ||||| |||||||||||||||| |||||||||||    
T  29890993 aaagacttcgactcctgcaaagataaaactcaaccaatgttgaccgcattaaatgag 29890937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 9e-53; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 135 - 313
Target Start/End: Complemental strand, 9033225 - 9033046
Alignment:
Q  135 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaatt--gccccccaagaaa 232  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||| |||    
T  9033225 aaaagacttcaattcctgcaagagtaaaagtcaactaatgttgaccatattaaatgaggctggtgaaaataccagctaacaaattgggacccccaa-aaa 9033127  T
Q  233 tgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtcac 313  Q
    ||||||||||||| |||||||||||| |||| |||||| |||||||| |||||    ||||||| ||||||||||||||||    
T  9033126 tgccattttcgactgaatataatcaaaggagggaattggcatttttgggaaaaattaaagtattccaaagcatgatgtcac 9033046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 94 - 283
Target Start/End: Complemental strand, 4765475 - 4765286
Alignment:
Q  94 atgctaagtccaacatctctttgaaactcctttgattgaag-aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgag 192  Q
    |||||||||||||||| || | ||||||||||   |||||| |||| ||||| |||||||||||||||||| ||||| |||||||| |||||||||||||    
T  4765475 atgctaagtccaacatttcgtcgaaactccttaagttgaaggaaaaaacttcgattcctgcaagagtaaaagtcaactaatgttgatcacattaaatgag 4765376  T
Q  193 gctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaa 283  Q
    |||||||||||| ||| |||||||||| | |||||| |||||||||||||||| ||| | | |  | |||||||||||  |||||||||||    
T  4765375 gctggtgaaaattccaactaacaaattacaccccaa-aaatgccattttcgactgaacaaattagaaggagagaattggtatttttgagaa 4765286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 99 - 312
Target Start/End: Original strand, 4770096 - 4770307
Alignment:
Q  99 aagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggt 198  Q
    |||||||||||||| |  ||| |||||   |||||||||||||| | |||||||||||  ||||| | ||| ||||||| |||||||||| ||| ||| |    
T  4770096 aagtccaacatctcgtcaaaattccttatgttgaagaaaagactacgattcctgcaaggataaaagtaaacgaatgttggccacattaaacgagtctgtt 4770195  T
Q  199 gaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttc 298  Q
     ||| ||||||||||||| || ||||||  ||||||||||||||||| |||| || || | ||||||||||| ||||||| || |||| |||||||||||    
T  4770196 aaaattaccagctaacaatttacccccc-tgaaatgccattttcgactgaatctattcgaaggagagaattggcattttttag-aaactctaagtatttc 4770293  T
Q  299 aaagcatgatgtca 312  Q
    ||||||||||||||    
T  4770294 aaagcatgatgtca 4770307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 24698845 - 24698727
Alignment:
Q  96 gctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct 195  Q
    |||||||| |||||||| | ||||||||||   ||||||||||||||||||||||| ||| ||||||| ||||| ||||||||| | ||||||||||| |    
T  24698845 gctaagtctaacatctcgtcgaaactccttatgttgaagaaaagacttcaattcctccaatagtaaaagtcaactaatgttgactaaattaaatgaggtt 24698746  T
Q  196 ggtgaaaataccagctaac 214  Q
    ||||||| || ||||||||    
T  24698745 ggtgaaattatcagctaac 24698727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 15687340 - 15687420
Alignment:
Q  135 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 215  Q
    |||||||||  |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  15687340 aaaagactttgattcctacaagagtaaaagtcaactaatgttgaccacattaaatgaggctggtgaacttaccagctaaca 15687420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 16242699 - 16242605
Alignment:
Q  120 ctcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatc-aaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 213  Q
    ||||||||||||| |||||||||||  ||||||||| ||||| | || ||| ||||||||||||||||||||||| || ||||||||||||||||    
T  16242699 ctcctttgattgaggaaaagacttcgcttcctgcaaaagtaacagtctaactaatgttgaccacattaaatgaggttgatgaaaataccagctaa 16242605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 29614155 - 29614037
Alignment:
Q  97 ctaagtccaacatctctttgaaactcctttgattgaagaaaaga-cttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct 195  Q
    |||||||| ||||||| | ||| |||||| | |||||||||| | |||  |||| ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  29614155 ctaagtcctacatctcgtcgaa-ctccttcgtttgaagaaaaaaactttgattcatgcaagagtaaaagtcaactaatattgaccacattaaatgaggct 29614057  T
Q  196 ggtgaaaataccagctaaca 215  Q
     ||||||||| |||||||||    
T  29614056 agtgaaaatagcagctaaca 29614037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 4832300 - 4832190
Alignment:
Q  94 atgctaagtccaacatctctttgaaactcctttgattgaag-aaaagacttcaattcctgc-aagagtaaaaatcaaccaatgttgaccacattaaatga 191  Q
    ||||||||||||||||||| |  ||||||||    || ||| |||||||||| |||||||| ||||  |||| ||||| ||||||||||| |||||||||    
T  4832300 atgctaagtccaacatctcgtcaaaactcctcaagttcaagaaaaagacttcgattcctgcaaagataaaaagtcaactaatgttgaccatattaaatga 4832201  T
Q  192 ggctggtgaaa 202  Q
    |||||||||||    
T  4832200 ggctggtgaaa 4832190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 7148945 - 7149005
Alignment:
Q  7 ttggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||||||| |||||||| |||| |||| ||||||||||||||| | |||||||||||    
T  7148945 ttggaaagaaactaatcccacgatcaacactccttccatgtagacaaccacttgtctccca 7149005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 29614568 - 29614512
Alignment:
Q  11 aaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||| |||||||||||||||||| |||||||||||||||  ||||||| ||||    
T  29614568 aaagaaactaatcccacaatcagcactccttccatgtagacaactgcttgtcgccca 29614512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 13428488 - 13428406
Alignment:
Q  132 aagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 215  Q
    ||||||| ||||| |||| ||||| ||  ||| ||||| ||||| |||| ||||||| ||||||||||||| ||||||||||||    
T  13428488 aagaaaacacttcgattcatgcaa-agataaagtcaactaatgtcgaccgcattaaacgaggctggtgaaattaccagctaaca 13428406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 15687107 - 15687166
Alignment:
Q  8 tggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    ||||||||||| |||||||| |||| |||| |||| |||||| ||| |||||||||||||    
T  15687107 tggaaagaaactaatcccacgatcatcactccttctatgtaggcaaccgcttgtctccca 15687166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 73 - 216
Target Start/End: Original strand, 11362017 - 11362160
Alignment:
Q  73 ttaaggcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaa 172  Q
    |||||||||||||| ||||  ||||||||||||||||||| ||||||||||||   ||||||||||||||||||| ||||||||||||||| ||||| ||    
T  11362017 ttaaggcttcgagaatttttcatgctaagtccaacatctcgttgaaactccttaagttgaagaaaagacttcaatacctgcaagagtaaaagtcaactaa 11362116  T
Q  173 tgttgaccacattaaatgaggctggtgaaaataccagctaacaa 216  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  11362117 tgttgaccactttaaatgaggctggtgaaaataccagctaacaa 11362160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 10071001 - 10071078
Alignment:
Q  171 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaa 249  Q
    ||||||||||| |||||||||| |||  |||| |||  ||||||||| | |||||||| |||||| |||||||||||||    
T  10071001 aatgttgaccatattaaatgagcctgtcgaaattacaggctaacaaaattccccccaa-aaatgcaattttcgacggaa 10071078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 99 - 312
Target Start/End: Original strand, 17525233 - 17525444
Alignment:
Q  99 aagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggt 198  Q
    ||||| |||||||| |||||||| |||   ||||||||||| |||| ||||||  | |||||||| ||||| |||||||||||||||||||||| |||||    
T  17525233 aagtctaacatctcgttgaaacttcttaagttgaagaaaaggcttcgattcctagaggagtaaaagtcaactaatgttgaccacattaaatgagactggt 17525332  T
Q  199 gaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttc 298  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||  |||||| |||| |||||||||    |||||||| ||||| ||||||||||     
T  17525333 gaaattaccagctaacaaattgccccccaa-aaatgctattttcgacaaaatatattcaaaggagagaatcagaatttttga-aaaactctaagtattta 17525430  T
Q  299 aaagcatgatgtca 312  Q
    ||||||||||||||    
T  17525431 aaagcatgatgtca 17525444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 31125872 - 31125745
Alignment:
Q  154 aagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatata 253  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||  |||||| || |||||||    
T  31125872 aagagtaaaagtcaactaatgttgaccacattaaatgaggatggtgaaaatatcagctaaaaaattgccccctaa-aaatgaaattttctactgaatata 31125774  T
Q  254 atcaacggagagaattgacatttttgaga 282  Q
     |||| ||||||||||| |||||||||||    
T  31125773 ttcaaaggagagaattggcatttttgaga 31125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 135 - 309
Target Start/End: Complemental strand, 22394179 - 22394009
Alignment:
Q  135 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatg 234  Q
    |||||||||  ||||||||||||||||||   ||| ||||||||||||||||||  |||||||||||| ||||| |||||| |||||||||||| |||||    
T  22394179 aaaagactttgattcctgcaagagtaaaacggaactaatgttgaccacattaaa--aggctggtgaaattaccaactaacagattgccccccaa-aaatg 22394083  T
Q  235 ccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatg 309  Q
     ||||||||||  ||| || |  | ||||| |||||  ||||||||| |||| ||||||||| || |||||||||    
T  22394082 tcattttcgacaaaatctatttgaaggagataattggaatttttgag-aaactctaagtattccagagcatgatg 22394009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 16177672 - 16177759
Alignment:
Q  131 gaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct---ggtgaaaataccagctaaca 215  Q
    |||||||||||||  |||||| ||||||||||| ||||| |||||| ||||||||||||||||||   ||||||||||||||||||||    
T  16177672 gaagaaaagactttgattcctacaagagtaaaagtcaactaatgttaaccacattaaatgaggctggaggtgaaaataccagctaaca 16177759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 16177460 - 16177519
Alignment:
Q  8 tggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  16177460 tggaaagaaactaatcccacaatcagcactccttccatgtagacaaccgcttgtctccca 16177519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 1176994 - 1176918
Alignment:
Q  97 ctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatg 174  Q
    |||| ||||||||||| ||||| ||||||| ||||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  1176994 ctaaatccaacatctcgttgaa-ctccttttattgaagaaaagatttcgattcctgcaagagtaaaagtcaactaatg 1176918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 31126124 - 31126065
Alignment:
Q  8 tggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    ||||||||||| |||||||  || |||||| ||||||||||||||| |||||||||||||    
T  31126124 tggaaagaaactaatcccaagattagcactccttccatgtagacaatcgcttgtctccca 31126065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 32784447 - 32784534
Alignment:
Q  118 aactcctttgattgaagaaaa-gacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaat 204  Q
    |||||| ||||||| |||||| || ||||||||||| || ||||||| ||||| ||| || ||||||||||||||| ||| |||||||    
T  32784447 aactccattgattgtagaaaaagatttcaattcctgtaaaagtaaaagtcaactaatattaaccacattaaatgagactgatgaaaat 32784534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 15830178 - 15830238
Alignment:
Q  8 tggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctcccat 68  Q
    ||||||||||| ||||||| ||| ||||||  ||||||||||||||  | |||||||||||    
T  15830178 tggaaagaaactaatcccataattagcactctttccatgtagacaactgtttgtctcccat 15830238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 71 - 327
Target Start/End: Original strand, 28371450 - 28371705
Alignment:
Q  71 ctttaaggcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaacc 170  Q
    |||||||||||| ||||||||  ||||||||||||||||||| |  |||||||||| | ||| | ||||  ||| |||||| | ||| ||||| |||||     
T  28371450 ctttaaggcttccagactttttcatgctaagtccaacatctcgtcaaaactcctttaactgagggaaaggtttcgattcctaccagaataaaagtcaact 28371549  T
Q  171 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattg 270  Q
    ||| ||| ||||||||||| | ||| |||||||||||| ||||||||||| || |||| |||||  ||||||||| ||||| | ||||  ||||||||||    
T  28371550 aatattggccacattaaattatgctagtgaaaataccaactaacaaattg-ccaccaaaaaatgttattttcgactgaatacattcaaaagagagaattg 28371648  T
Q  271 acatttttgagaaaacgctaagtatttcaaagcatgatgtcacaattatcatgactt 327  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||  | ||||||||||    
T  28371649 acatttttgagaaaactctatgtattccaaagcatgatgtcactctaatcatgactt 28371705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 23540099 - 23539981
Alignment:
Q  98 taagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctgg 197  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  23540099 taagtccaacatctcgtcgaaactcctttgattgaagaaaagacttcaaatactgcaagagtaaaagtcaactaatattgaccacattaaatgaggctgg 23540000  T
Q  198 tgaaaataccagctaacaa 216  Q
    ||| ||||| |||||||||    
T  23539999 tgacaatacgagctaacaa 23539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 10662109 - 10662187
Alignment:
Q  135 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 213  Q
    |||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || |||||||    
T  10662109 aaaagacttcgagtcctgcaagagtaaaagtcaactaatgttgaccacattaaatgagtctggtgaaattatcagctaa 10662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 28371281 - 28371341
Alignment:
Q  7 ttggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||||||| |||| ||| ||||||||| ||||||||||||||| |||||||||||||    
T  28371281 ttggaaagaaactaatctcacgatcagcactccttccatgtagacaaccgcttgtctccca 28371341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 135 - 312
Target Start/End: Original strand, 16600980 - 16601159
Alignment:
Q  135 aaaagacttcaattcctgcaagagtaaaaa-tcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 233  Q
    |||| ||||||||||||||||   |||||| ||||| |||||||||  ||||||||||| ||| ||||| |||  ||||| |||||| ||| ||| ||||    
T  16600980 aaaatacttcaattcctgcaaagataaaaagtcaactaatgttgactgcattaaatgagtctgttgaaattacaggctaataaattg-ccctcaaaaaat 16601078  T
Q  234 gccattttcgacggaatata-atcaacggagagaattgacatttttgagaaaacg--ctaagtatttcaaagcatgatgtca 312  Q
    | |||||||||| ||| | |  || | |||| |||||||||||||||| ||||||  | ||| |||||||||||||||||||    
T  16601079 gtcattttcgactgaaaaaatttcgaaggagggaattgacatttttga-aaaacgtcccaagcatttcaaagcatgatgtca 16601159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 312
Target Start/End: Complemental strand, 22713303 - 22713164
Alignment:
Q  172 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 271  Q
    ||||||||  ||||||| ||| ||| | ||| |||  ||| |||||||||||||  | ||||| |||||||||| ||| ||  |||| | |||  ||||     
T  22713303 atgttgactgcattaaacgagcctgttaaaactacaggcttacaaattgcccccacaaaaatgtcattttcgactgaaaattttcaaagaagaatattgg 22713204  T
Q  272 catttttgagaaaacgctaagtatttcaaagcatgatgtca 312  Q
     |||||||| ||||| |||||||||||||||||||| ||||    
T  22713203 aatttttga-aaaactctaagtatttcaaagcatgacgtca 22713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 24092900 - 24092825
Alignment:
Q  171 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacgg 247  Q
    |||||| ||||||||||||||| |||  |||| |||  |||| |||| |||||||||| |||| |||||||||||||    
T  24092900 aatgttaaccacattaaatgagcctgtcgaaattacaggctatcaaactgccccccaa-aaataccattttcgacgg 24092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 78 - 285
Target Start/End: Complemental strand, 20064265 - 20064063
Alignment:
Q  78 gcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttg 177  Q
    |||||||||||||| |  |||| |||||||||||| | ||| ||| ||||||||||||||||||||| |||||||||||||||||| |||||  ||||||    
T  20064265 gcttcgagactttttac-gctaggtccaacatctcgtcgaa-ctcttttgattgaagaaaagacttcgattcctgcaagagtaaaagtcaactgatgttg 20064168  T
Q  178 accacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttt 277  Q
    ||||||||||| |||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||  ||   || |||| |||||| |||||||||||    
T  20064167 accacattaaacgaggctggtgaaaataacagctaacaaattgtcccccaa-aaatgtcattttcgaatga--ctactcaaaggagaggattgacatttt 20064071  T
Q  278 tgagaaaa 285  Q
    || |||||    
T  20064070 tgggaaaa 20064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 25951664 - 25951783
Alignment:
Q  96 gctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct 195  Q
    ||||| |||||||| || ||||| |||||||||||  |||||||||||  |||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  25951664 gctaaatccaacatttcgttgaa-ctcctttgattagagaaaagactttgattcgtgcaagagtaaaagtcaactaatgttgaccacattaaatgaggct 25951762  T
Q  196 ggtgaaaataccagctaacaa 216  Q
    |||||||||||||||||||||    
T  25951763 ggtgaaaataccagctaacaa 25951783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 20058418 - 20058300
Alignment:
Q  96 gctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct 195  Q
    |||| |||||||||||| | ||| ||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||  ||||||||||||||||||||    
T  20058418 gctaggtccaacatctcgtcgaa-ctcttttgattgaagaaaagacttcgattcctgcaagagtaaaagtcaactaatactgaccacattaaatgaggct 20058320  T
Q  196 ggtgaaaataccagctaaca 215  Q
    |||||||||| |||||||||    
T  20058319 ggtgaaaatatcagctaaca 20058300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 21165557 - 21165655
Alignment:
Q  118 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 216  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||| |||||||||    
T  21165557 aactcctttgattgaaggaaagacttcgcttcctgcaagagtaaaagtcaactaatgttgaccacattaagtgaggctggtaaaaatactagctaacaa 21165655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 23209893 - 23209772
Alignment:
Q  96 gctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct 195  Q
    ||||| ||||||||||| | ||| |||||||| |||||||||| ||||| |||||||||||||||||| ||||| | ||||||||||||||| |||||||    
T  23209893 gctaaatccaacatctcgtcgaa-ctcctttgtttgaagaaaatacttcgattcctgcaagagtaaaagtcaactattgttgaccacattaattgaggct 23209795  T
Q  196 ggtgaaaataccagctaacaaat 218  Q
    |||| ||||| ||||||| ||||    
T  23209794 ggtgcaaataacagctaataaat 23209772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 20061207 - 20061323
Alignment:
Q  96 gctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct 195  Q
    ||||||||||||||||| | ||| | ||||| ||||||||||| ||||| |||||||||||||||||| ||||| |||| |||||| |||||| ||||||    
T  20061207 gctaagtccaacatctcgtcgaa-cacctttcattgaagaaaa-acttcgattcctgcaagagtaaaagtcaactaatggtgaccatattaaacgaggct 20061304  T
Q  196 ggtgaaaataccagctaaca 215  Q
    |||| |||||||||| ||||    
T  20061305 ggtg-aaataccagcaaaca 20061323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 20713386 - 20713443
Alignment:
Q  10 gaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  20713386 gaaagaaactaatcccacgatcagcactccttccatgtagacaaccgcttgtctccca 20713443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 19217771 - 19217727
Alignment:
Q  171 aatgttgaccacattaaatgaggctggtgaaaataccagctaaca 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  19217771 aatgttgaccacattaaatgaggctggtgaaattaccagctaaca 19217727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 20713575 - 20713647
Alignment:
Q  96 gctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaac 169  Q
    ||||||||||| ||||| | ||| ||||||||||||||||||||||||  |||||||||||| ||||| |||||    
T  20713575 gctaagtccaatatctcgtcgaa-ctcctttgattgaagaaaagactttgattcctgcaagaataaaagtcaac 20713647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 23210084 - 23210024
Alignment:
Q  8 tggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctcccat 68  Q
    ||||||||||| |||||||| |||| |||| ||||||| ||||||| ||||||||||||||    
T  23210084 tggaaagaaactaatcccacgatcaacactccttccatttagacaaccgcttgtctcccat 23210024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 24878782 - 24878889
Alignment:
Q  134 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 233  Q
    ||||||||||| |||| |||||   ||||| ||||| |||||||||  ||||||||||| ||| ||||| |||  |||||||||||| ||||||| ||||    
T  24878782 gaaaagacttcgattcttgcaaagataaaagtcaactaatgttgactgcattaaatgagcctgttgaaattacaggctaacaaattgacccccaa-aaat 24878880  T
Q  234 gccattttc 242  Q
    | |||||||    
T  24878881 gtcattttc 24878889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 17987914 - 17987988
Alignment:
Q  171 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacg 246  Q
    ||||||||||| |||||||||| |||  |||| ||| |||||||||| |||||||||| |||| ||||||||||||    
T  17987914 aatgttgaccatattaaatgagcctgtcgaaattacaagctaacaaaatgccccccaa-aaatcccattttcgacg 17987988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 20064439 - 20064388
Alignment:
Q  8 tggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgctt 59  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||| |||||    
T  20064439 tggaaagaaactaatcccacaatcagcacaccttccatgtagacaaccgctt 20064388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 22011479 - 22011588
Alignment:
Q  136 aaagacttcaattcctgcaagagtaaaaa-tcaaccaa-tgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 233  Q
    |||| |||| |||||||||| |||||||| |||||||| |||||||||||||||||||  ||| ||||| |||   |||||||| |||||||  | ||||    
T  22011479 aaagccttcgattcctgcaa-agtaaaaagtcaaccaaatgttgaccacattaaatgaatctgttgaaattacagactaacaaactgccccc--aaaaat 22011575  T
Q  234 gccattttcgacg 246  Q
    |||||||||||||    
T  22011576 gccattttcgacg 22011588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 25951474 - 25951528
Alignment:
Q  11 aaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctcc 65  Q
    |||||||| |||| ||| |||| |||| ||||||||||||||| |||||||||||    
T  25951474 aaagaaactaatctcacgatcaacactccttccatgtagacaaccgcttgtctcc 25951528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 20058602 - 20058550
Alignment:
Q  15 aaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||| |||||||| ||||||||| |||||||| | |||| |||||||||||||    
T  20058602 aaactaatcccacgatcagcactccttccatgcaaacaaccgcttgtctccca 20058550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 75 - 212
Target Start/End: Original strand, 20146549 - 20146686
Alignment:
Q  75 aaggcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatg 174  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||  ||||||  |||||||||| |||||||||||||||| | | ||| ||||    
T  20146549 aaggcttcgagacttttcaatgctaagtccaacatctcgtcgaaactcctacgattgagtaaaagacttcgattcctgcaagagtaatagttaactaatg 20146648  T
Q  175 ttgaccacattaaatgaggctggtgaaaataccagcta 212  Q
    ||| |||||||||||||| |||||||| ||||||||||    
T  20146649 ttggccacattaaatgagactggtgaatataccagcta 20146686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 11013614 - 11013493
Alignment:
Q  94 atgctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgagg 193  Q
    ||||||||||||||||||| | ||||||||||   |||||||||||||||| |||||||||||||||||| | | | |||||||||||||||||||||||    
T  11013614 atgctaagtccaacatctcgtcgaaactccttaagttgaagaaaagacttcgattcctgcaagagtaaaagtaagctaatgttgaccacattaaatgagg 11013515  T
Q  194 ctggtgaaaataccagctaaca 215  Q
    ||| ||||| ||||||||||||    
T  11013514 ctgatgaaattaccagctaaca 11013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 134 - 327
Target Start/End: Complemental strand, 22619770 - 22619579
Alignment:
Q  134 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 233  Q
    ||||||||||| ||||||||||   ||||| ||||| |||||||||||||||||||||| ||  || |||||   |||||||||||||| ||||| ||||    
T  22619770 gaaaagacttcgattcctgcaaagataaaagtcaactaatgttgaccacattaaatgagccttttggaaatataggctaacaaattgcctcccaa-aaat 22619672  T
Q  234 gccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtcacaattatcatgactt 327  Q
    | |||||||||| ||||| | || | ||||| |||||  | |||||| |||||  |||||||||||||||||||||||| | | ||||||||||    
T  22619671 gtcattttcgactgaatacattcgaaggagataattggtaattttga-aaaactataagtatttcaaagcatgatgtcatattaatcatgactt 22619579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 11013792 - 11013745
Alignment:
Q  20 aatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||| ||||||||| ||||||||||||||| | |||||||||||    
T  11013792 aatcccacgatcagcacttcttccatgtagacaaccacttgtctccca 11013745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 33103226 - 33103273
Alignment:
Q  20 aatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    ||||||||||||| |||| ||||||||||||||| | |||||||||||    
T  33103226 aatcccacaatcaacacttcttccatgtagacaaccacttgtctccca 33103273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 17615684 - 17615766
Alignment:
Q  134 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 216  Q
    ||||||| ||| ||||||||||   ||||| ||||| |||||||||| ||||||||||| ||| ||||| |||  ||||||||    
T  17615684 gaaaagatttcgattcctgcaaagataaaagtcaactaatgttgaccgcattaaatgagtctgttgaaattacatgctaacaa 17615766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 13232470 - 13232414
Alignment:
Q  159 taaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 215  Q
    ||||| ||||| ||||||||||||||||||| ||| |||| ||| ||||| ||||||    
T  13232470 taaaagtcaactaatgttgaccacattaaataaggttggtcaaattaccacctaaca 13232414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 20146377 - 20146437
Alignment:
Q  7 ttggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||||||| | |||||| |||| |||| |||| |||||||||| | |||||||||||    
T  20146377 ttggaaagaaactagtcccacgatcaacactccttctatgtagacaatcacttgtctccca 20146437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 5470 - 5337
Alignment:
Q  75 aaggcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatg 174  Q
    |||||||||||||||||  ||||||||||||||||||| | |||| | |||  ||||| ||||| ||||| || ||||||||||||||| ||||| || |    
T  5470 aaggcttcgagactttttgatgctaagtccaacatctcgtcgaaaattcttcaattgatgaaaaaacttcgatacctgcaagagtaaaagtcaactaaag 5371  T
Q  175 ttgaccacattaaatgaggctggtgaaaatacca 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  5370 ttgaccacaataaatgaggctggtgaaaatacca 5337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 5642 - 5582
Alignment:
Q  7 ttggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||| ||||| |||||||| |||| |||| ||||||| ||||||| |||||||||||||    
T  5642 ttggaatgaaactaatcccacgatcaacactccttccatatagacaaccgcttgtctccca 5582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 2545771 - 2545864
Alignment:
Q  135 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaa 228  Q
    |||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2545771 aaaagacttcgattcctgcaagagtaaaagtcaagtaatgttgaccacattaaatgaggctggtgaaattaccagctaacaaattgcctcccaa 2545864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 216
Target Start/End: Original strand, 20146231 - 20146371
Alignment:
Q  75 aaggcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatg 174  Q
    |||||||| |||||||| | |||||| ||||||||||| ||||||||||||| |  |||| |||  |||| ||||||  || ||||||| ||||| ||||    
T  20146231 aaggcttcaagacttttta-tgctaactccaacatctcgttgaaactcctttaacagaaggaaaagcttcgattcctttaacagtaaaagtcaactaatg 20146329  T
Q  175 ttgaccacattaaatgaggctggtgaaaataccagctaacaa 216  Q
    |||||||||||| || | |||| ||||||||||| |||||||    
T  20146330 ttgaccacattacataacgctgatgaaaataccatctaacaa 20146371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 71 - 213
Target Start/End: Complemental strand, 14986882 - 14986744
Alignment:
Q  71 ctttaaggcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaag-aaaagacttcaattcctgcaagagtaaaaatcaac 169  Q
    ||||||||||| | ||| |||  |||  ||||| |||||||| |||||||| |||| |||| || |||| ||||  |||||||||||||||||| |||||    
T  14986882 ctttaaggctttgggacattttcatgtgaagtctaacatctcgttgaaacttcttttattggagaaaaatacttggattcctgcaagagtaaaagtcaac 14986783  T
Q  170 caatgttgaccacattaaatgaggctggtgaaaataccagctaa 213  Q
     ||||||||||     ||||||||||||||||||||||||||||    
T  14986782 taatgttgacc-----aaatgaggctggtgaaaataccagctaa 14986744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 71 - 213
Target Start/End: Complemental strand, 15416493 - 15416355
Alignment:
Q  71 ctttaaggcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaag-aaaagacttcaattcctgcaagagtaaaaatcaac 169  Q
    ||||||||||| | ||| |||  |||  ||||| |||||||| |||||||| |||| |||| || |||| ||||  |||||||||||||||||| |||||    
T  15416493 ctttaaggctttgggacattttcatgtgaagtctaacatctcgttgaaacttcttttattggagaaaaatacttggattcctgcaagagtaaaagtcaac 15416394  T
Q  170 caatgttgaccacattaaatgaggctggtgaaaataccagctaa 213  Q
     ||||||||||     ||||||||||||||||||||||||||||    
T  15416393 taatgttgacc-----aaatgaggctggtgaaaataccagctaa 15416355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 4173222 - 4173104
Alignment:
Q  96 gctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct 195  Q
    |||| |||||||||||| | ||| ||| ||||||||||| ||| ||||  || ||||||| | || || ||||| |||||||| |||||||||| ||||     
T  4173222 gctaggtccaacatctcgtcgaa-ctcttttgattgaaggaaatactttgatacctgcaaaattataagtcaactaatgttgaacacattaaataaggca 4173124  T
Q  196 ggtgaaaataccagctaaca 215  Q
    ||||||||||||||||||||    
T  4173123 ggtgaaaataccagctaaca 4173104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 20146059 - 20146119
Alignment:
Q  7 ttggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||||||| |||||||| ||||||||| |||||||| |||||| |||||||||||||    
T  20146059 ttggaaagaaactaatcccacgatcagcactccttccatgaagacaaccgcttgtctccca 20146119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 2547158 - 2547215
Alignment:
Q  10 gaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    ||||||||| |||||||| |||| |||| ||||||||||||||| |||||||||||||    
T  2547158 gaaagaaactaatcccacgatcaacactccttccatgtagacaaccgcttgtctccca 2547215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 2563197 - 2563233
Alignment:
Q  181 acattaaatgaggctggtgaaaataccagctaacaaa 217  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2563197 acattaaatgaggctggtgaaattaccagctaacaaa 2563233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 14987048 - 14986989
Alignment:
Q  8 tggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||||||  ||| ||| |||| |||| ||||||||||||||| |||||||||||||    
T  14987048 tggaaagaaacttatctcacgatcatcactccttccatgtagacaaccgcttgtctccca 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 15416659 - 15416600
Alignment:
Q  8 tggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||||||  ||| ||| |||| |||| ||||||||||||||| |||||||||||||    
T  15416659 tggaaagaaacttatctcacgatcatcactccttccatgtagacaaccgcttgtctccca 15416600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 10648996 - 10648940
Alignment:
Q  136 aaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgag 192  Q
    ||||||||| |||| |||||   ||| | ||||||||||||||||||||||||||||    
T  10648996 aaagacttcgattcttgcaaagataatagtcaaccaatgttgaccacattaaatgag 10648940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 5869 - 5725
Alignment:
Q  71 ctttaaggcttcgagacttttcaatgctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaacc 170  Q
    ||||| |||||| || |||||  |||||||||| |||||||| ||||||||||||| | ||| |||||| |||| ||||||||||||  |||| ||| |     
T  5869 ctttagggcttcaaggctttttcatgctaagtctaacatctcgttgaaactcctttaactgaggaaaaggcttcgattcctgcaagaaaaaaagtcacct 5770  T
Q  171 aatgttgaccacattaaatgaggctggtgaaaataccagctaaca 215  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||    
T  5769 aatgttgaccgcattaaatgaggttggtaaaaataccagctaaca 5725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 6031 - 5971
Alignment:
Q  7 ttggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||||||||||| |||||||| |||||||||  |||||||||| ||| |||||||||||||    
T  6031 ttggaaagaaactaatcccacgatcagcactcgttccatgtaggcaaccgcttgtctccca 5971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 159 - 312
Target Start/End: Complemental strand, 373847 - 373696
Alignment:
Q  159 taaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaa 258  Q
    ||||| ||||| ||||||||||||||||||||||| |||| |||  |||| ||||||||||||||||||| ||| ||||||||||||  ||  |  |  |    
T  373847 taaaagtcaactaatgttgaccacattaaatgaggttggtaaaataaccaactaacaaattgccccccaa-aaaagccattttcgacttaaattttttga 373749  T
Q  259 cggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtca 312  Q
     | ||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  373748 agaagagaattgtcatttttga-aaaactctaagtatttcaaagcatgatgtca 373696  T

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Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 374088 - 374041
Alignment:
Q  20 aatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    |||| ||| ||||||||| ||||||||||||||| |||||||||||||    
T  374088 aatctcacgatcagcacttcttccatgtagacaaccgcttgtctccca 374041  T

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Target: scaffold0161 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 5276 - 5388
Alignment:
Q  96 gctaagtccaacatctctttgaaactcctttgattgaagaaaagacttcaattcctgc-aagagtaaaaatcaaccaatgttgaccacattaaatgaggc 194  Q
    ||||||||||||||||| ||||| ||||||   |||||||||||||||  |||||||| |||| ||||| ||||| ||||||||||||||||||||| ||    
T  5276 gctaagtccaacatctcgttgaagctccttaagttgaagaaaagactttgattcctgcgaaga-taaaagtcaactaatgttgaccacattaaatgatgc 5374  T
Q  195 tggtgaaaatacca 208  Q
    |||||||| |||||    
T  5375 tggtgaaattacca 5388  T

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Target: scaffold0264 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 21225 - 21337
Alignment:
Q  94 atgctaagtccaacatctctttgaaactcctttgattgaagaaaaga-cttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgag 192  Q
    ||||| ||||||||||||| | ||||||| || | ||||||||||   |||| |||| ||||| | ||||| ||||| |||||||| || ||||||||||    
T  21225 atgcttagtccaacatctcgtcgaaactctttcggttgaagaaaaatgcttcgattcttgcaaaaataaaagtcaacaaatgttgatcatattaaatgag 21324  T
Q  193 gctggtgaaaata 205  Q
    | |||||||||||    
T  21325 gatggtgaaaata 21337  T

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Target: scaffold0264; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 21038 - 21097
Alignment:
Q  8 tggaaagaaacgaatcccacaatcagcactacttccatgtagacaaacgcttgtctccca 67  Q
    ||||||||||| |||||||| |||| |||| ||||||||| ||||| |||||||||||||    
T  21038 tggaaagaaactaatcccacgatcaacactccttccatgttgacaaccgcttgtctccca 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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