View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18598_low_36 (Length: 277)
Name: NF18598_low_36
Description: NF18598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18598_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 7871428 - 7871687
Alignment:
| Q |
9 |
acatcatcacacaagtaaaccaaagtaaaaacgcgtaaaaagaatgccactactgccaaaattacaagatactgcaccagtatgcagcatatttcaacac |
108 |
Q |
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| T |
7871428 |
acatcatcacacaagtaaaccaaagtaaaaacgcataaaaagaatgccactactgccaaaattacaagatactgcaccagtatgcagcatatttcaacac |
7871527 |
T |
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| Q |
109 |
aaccatgactaactaaatcatagggaaaaaactcatgaatccaagaaaatatacattaccccatattatatatctttcacatagattcactgtatcatgc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7871528 |
aaccatgactaactaaatcatagggaaaaaactcatgaatccaagaaaatatacattaccccatattatatatctttcacatagattcactgtatcatgc |
7871627 |
T |
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| Q |
209 |
ctacctctcttttatgtatcannnnnnnatgctgtcctttacaccctatcattgatgatg |
268 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |
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| T |
7871628 |
ctacctctcttttatgtatcatttttttatgctgtcctttacaccctatcattgaagatg |
7871687 |
T |
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