View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18598_low_37 (Length: 277)
Name: NF18598_low_37
Description: NF18598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18598_low_37 |
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| [»] scaffold0007 (1 HSPs) |
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Alignment Details
Target: scaffold0007 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 203331 - 203578
Alignment:
| Q |
19 |
actctatctcttcctcccattattattatttaaattaaagagaacctaatcatttccacttagttttatttcacaagtgacttaagaaccttatgcaaaa |
118 |
Q |
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| T |
203331 |
actctatctcttcctcccattattattatttaaatcaaagagaacctaatcatttccacttagttttatttcacaagtgacttaagaaccttatgcaaaa |
203430 |
T |
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| Q |
119 |
cgtggtttttcactgtttctttagcggctaaatataaagtattaaatacgattaattttatctggtcaattgtatgtcatcgctgtaaagctaatatatt |
218 |
Q |
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| T |
203431 |
cgtggtttttcactgtttctttagcggctaaatataaagtattaaatacgattaattttatctggtcaattgtatgtcatcgctgtaaagctaatatatt |
203530 |
T |
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| Q |
219 |
cnnnnnnnctgaaagactttttcaaaatatatttgtctcttctcctatg |
267 |
Q |
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| T |
203531 |
c-aaaaaactgaaagactttttcaaaatatatttgtctcttctcctatg |
203578 |
T |
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