View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18599_low_24 (Length: 301)
Name: NF18599_low_24
Description: NF18599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18599_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 15 - 283
Target Start/End: Complemental strand, 43601718 - 43601450
Alignment:
| Q |
15 |
atcaaaacttgtaatatatctgtataaaggattgataaacgtttatatacactcatgttccatgttggtcacctactcaagaacaaataaacaattccag |
114 |
Q |
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| T |
43601718 |
atcaaaacttgtaatatatctgtataaaggattgataaacgtttatatacactcatgttccatgttggtcacctactcaagaacaaataaacaattccag |
43601619 |
T |
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| Q |
115 |
aatgagcctctttgtcacacaaagaactgatgacaaaagaagacactgaattgtcaacaaaaataaaatttgagttacaagacatcattttaagatccct |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43601618 |
aatgagcctctttgtcacacaaagaactgatgacaaaagaagacactgaattgtcaacaaaaataaaatttgagttacaagacatcattttaagatccct |
43601519 |
T |
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| Q |
215 |
ggatttctgttccatgataagtaggatggatctccaagaggtctgcaaatagagaaatatagcaatgtt |
283 |
Q |
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| T |
43601518 |
ggatttctgttccatgataagtaggatggatctccaagaggtctgcaaatagagaaatatagcaatgtt |
43601450 |
T |
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