View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1859_high_4 (Length: 336)
Name: NF1859_high_4
Description: NF1859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1859_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 53 - 321
Target Start/End: Original strand, 31817920 - 31818187
Alignment:
| Q |
53 |
tcattgaactatatgagcaagcaaatagaaaatagataaatacattttaaaaatcatacttgcaaatgagcaagcaatgaaacaagggaaaggaaaaagg |
152 |
Q |
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| T |
31817920 |
tcattgaactatatgagcaagcaaatagaaaatagataaatacattttaaaaatca-acttgcaaatgagcaagcaatgaaacaaggcaaaggaaaaagg |
31818018 |
T |
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| Q |
153 |
ttccagcaaaagaggtaagcccaatagttccaaaaaccaaaccaatcaactgaatgaagcttctcaattctttgtctcttttggnnnnnnnatgatcatt |
252 |
Q |
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| T |
31818019 |
ttccagcaaaagaggtaagaccaatagttccaaaaaccaaaccaatcaactgaatgaagcttctcaattctttgtctcttttggtttttgtatgatcatt |
31818118 |
T |
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| Q |
253 |
tatagaaagtgggacataattccaaccatgttgacatttgcaacacctttcaaatctttccttcacctt |
321 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31818119 |
tatagaaagtgggacataattccaaccatgttgacatttgcaacacctttcaaatctttccttcacctt |
31818187 |
T |
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