View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18602_high_16 (Length: 270)
Name: NF18602_high_16
Description: NF18602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18602_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 29 - 255
Target Start/End: Original strand, 26480582 - 26480808
Alignment:
| Q |
29 |
agatggaaagcacttaagaaactagaaagaaaaacaaattaatagggggacatagtagttttctgttgatgtattccacaaagaaagtgatggggaaaat |
128 |
Q |
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| T |
26480582 |
agatggaaagcacttaagaaactagaaagaaaaacaaattaatagggggacatagtagttttctgttgatgtattccacaaagaaagtgatggggaaaat |
26480681 |
T |
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| Q |
129 |
gagatgttgaaagaaagcaggtcccattcaccttttgctgtggtatagggtcatttttaagtgtatgcaactagtaacatatatagaaaataacggggac |
228 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
26480682 |
gagatgtagaaagaaagcaggtcccattcaccttttgctgtggtatagggtcatttttaagtgtatgcaactagtaacatatatagaaaataatggggac |
26480781 |
T |
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| Q |
229 |
ctatagagagactcttgaacaaaaaat |
255 |
Q |
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||||||||||||||||||||||||||| |
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| T |
26480782 |
ctatagagagactcttgaacaaaaaat |
26480808 |
T |
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