View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18602_high_17 (Length: 247)
Name: NF18602_high_17
Description: NF18602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18602_high_17 |
 | |
|
| [»] chr4 (14 HSPs) |
| |
|
| [»] scaffold0016 (1 HSPs) |
| | |
|
| [»] scaffold0129 (1 HSPs) |
| | |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 44968234 - 44967998
Alignment:
| Q |
10 |
aatattatgtattagttatcattacatgatttaggaaaatcgtgacacgatcttgcacaagtttgagcattatttaaggtttcatggttcattttttgag |
109 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
44968234 |
aatattatgtattagttatcattacacgatttaggaaaatcgtgacacgatcttgcacaagtttgagcattatttaaggtttcatggttcattttt-gag |
44968136 |
T |
|
| Q |
110 |
gtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaa |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
44968135 |
gtagagcttcaagagagagacacttgaaaaatcaaagaagataattttaaggttgaaggtatttggtgagggttctcttggatttggaaacatttgtaaa |
44968036 |
T |
|
| Q |
210 |
cacattggttgagtgaaatcattgagcctgctgttctt |
247 |
Q |
| |
|
|| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
44968035 |
caaattggttgagtgaaatcattgagcctgttgttctt |
44967998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 52467688 - 52467534
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| ||||||||| ||| | ||||||||||||||||| ||| | |||||||| ||||||||||| |||||| ||| |||| | || |
|
|
| T |
52467688 |
tatttaaggcttcattcttcattttt-gag-tggagcttcaagagagagaaactagggtaatcaaaggaggtaattttagggttgagggtctttgattag |
52467591 |
T |
|
| Q |
180 |
ggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
||||||||||| || |||||| ||||||||||| |||| |||||| ||||||||||| |
|
|
| T |
52467590 |
ggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgag |
52467534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 5208138 - 5208031
Alignment:
| Q |
120 |
aagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggtt |
219 |
Q |
| |
|
|||||||||| | ||| |||||||||| |||||| | || ||||| ||| ||||||||||||||||||||||| |||||| ||||||||||| |||| | |
|
|
| T |
5208138 |
aagagagagaaatttggaaaatcaaaggaggtaactatagggttgcgggtctttggtgagggttctcttggattgggaaacatttgtaaacaccttgggt |
5208039 |
T |
|
| Q |
220 |
gagtgaaa |
227 |
Q |
| |
|
|||||||| |
|
|
| T |
5208038 |
gagtgaaa |
5208031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 21704128 - 21704034
Alignment:
| Q |
115 |
gcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaa |
209 |
Q |
| |
|
||||||||||||||| |||||| |||||||| |||||| |||||||||||| || |||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
21704128 |
gcttcaagagagagaaacttgagaaatcaaatgaggtaactttaaggttgaaagtctttggtgagggttctcttgggttgagaaacatttgtaaa |
21704034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 24968980 - 24969100
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
|||||||||||| | ||||| ||||||||| |||||| ||||||||||| ||| |||| | || |||||||||| || |||||| ||||||||||| || |
|
|
| T |
24968980 |
cttcaagagagaaaaacttgggaaatcaaaggaggtaactttaaggttgacggtctttgattagagttctcttgggttgggaaacatttgtaaacacctt |
24969079 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||||| ||||||||||| |
|
|
| T |
24969080 |
gggtgagtgaaaatcattgag |
24969100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 23043093 - 23042971
Alignment:
| Q |
113 |
gagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag-ggttctcttggatttggaaacgtttgtaaaca |
211 |
Q |
| |
|
||||||||| ||||||| |||||| |||||||| | ||| |||| |||||||||| |||||| || ||||||||| |||| |||||| |||||||||| |
|
|
| T |
23043093 |
gagcttcaacagagagaaacttgagaaatcaaaagatttaactttagggttgaaggtctttggtaagaggttctcttagattgggaaacatttgtaaaca |
23042994 |
T |
|
| Q |
212 |
cattggttgagtgaaatcattga |
234 |
Q |
| |
|
| |||| ||| |||||||||||| |
|
|
| T |
23042993 |
ccttggatgaatgaaatcattga |
23042971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 37755223 - 37755111
Alignment:
| Q |
117 |
ttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag-ggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||||| ||||| |||||||||| |||||| |||| | |||| || ||||||||| |||||||||||||| |||| ||||||||||| || |
|
|
| T |
37755223 |
ttcaagagagagaaacttggaaaatcaaaggaggtaactttaggattgagagtctttggtgagaggttctcttggattatgaaatatttgtaaacacctt |
37755124 |
T |
|
| Q |
216 |
ggttgagtgaaat |
228 |
Q |
| |
|
| |||||||||| |
|
|
| T |
37755123 |
aggtgagtgaaat |
37755111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 54200219 - 54200086
Alignment:
| Q |
102 |
tttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacg |
201 |
Q |
| |
|
||||||| | |||||| |||||||||| |||| ||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| |
|
|
| T |
54200219 |
tttttgaagaagagctgaaagagagagaaacttaggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaaca |
54200120 |
T |
|
| Q |
202 |
tttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| ||||||||||||| |||||| ||||||||||| |
|
|
| T |
54200119 |
tt-gtaaacacattgggtgagtgaaaatcattgag |
54200086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 6677400 - 6677456
Alignment:
| Q |
179 |
gggttctcttggatttggaaacgtttgtaaacacattggttgagtgaaatcattgag |
235 |
Q |
| |
|
|||||||||||| || |||||| |||||||||||||||| |||||||||| |||||| |
|
|
| T |
6677400 |
gggttctcttgggttgggaaacatttgtaaacacattggatgagtgaaataattgag |
6677456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 45687530 - 45687422
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| |||||||||||| || ||||||||||||||| ||| | ||||||||| |||||| |||| |||||| ||| |||| | || |
|
|
| T |
45687530 |
tatttaaggcttcattcttcattttttgaaa-agggcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattag |
45687432 |
T |
|
| Q |
180 |
ggttctcttg |
189 |
Q |
| |
|
|||||||||| |
|
|
| T |
45687431 |
ggttctcttg |
45687422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 46147689 - 46147581
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||||||||| |||| |||||| | |||||||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |
|
|
| T |
46147689 |
tatttaaggtttcattcttcaatttttg-gtaagagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattag |
46147591 |
T |
|
| Q |
180 |
ggttctcttg |
189 |
Q |
| |
|
|||| ||||| |
|
|
| T |
46147590 |
ggttttcttg |
46147581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 29254368 - 29254482
Alignment:
| Q |
121 |
agagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggttg |
220 |
Q |
| |
|
||||||||| ||||| ||||||||| || ||| |||| |||||||||| |||| || |||||||||| || |||||| || ||||||||||||| || |
|
|
| T |
29254368 |
agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgagtagagttctcttgggttgggaaacatt-gtaaacacattgggtg |
29254466 |
T |
|
| Q |
221 |
agtg-aaatcattgag |
235 |
Q |
| |
|
| || ||||||||||| |
|
|
| T |
29254467 |
aatgaaaatcattgag |
29254482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 37230049 - 37229962
Alignment:
| Q |
102 |
tttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttg |
189 |
Q |
| |
|
|||||||| |||||||||||||||| | |||||| ||||||||| |||||| |||| |||| | ||| |||| | |||||| ||||| |
|
|
| T |
37230049 |
tttttgagtaagagcttcaagagagacaaacttgagaaatcaaaggaggtaactttagggtttagggtctttgattagggttatcttg |
37229962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 6375942 - 6376006
Alignment:
| Q |
114 |
agcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtga |
178 |
Q |
| |
|
||||||| |||||||| |||| ||||||||| ||||||||||| |||||| ||| |||||||| |
|
|
| T |
6375942 |
agcttcaggagagagaatcttgggaaatcaaaggaggtaattttagggttgagggtctttggtga |
6376006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 38863657 - 38863835
Alignment:
| Q |
33 |
acatgatttaggaaaatcgtgacacgatcttgcacaagtttgagcattatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacac |
132 |
Q |
| |
|
|||||||||||| |||| || |||| || || ||| |||||||| | |||||| |||||||||||||||||||||||| || ||| ||||||||||| || |
|
|
| T |
38863657 |
acatgatttaggcaaattgttacac-attttacactagtttgagtactatttatggtttcatggttcattttttgaggaagggctccaagagagagaaac |
38863755 |
T |
|
| Q |
133 |
ttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagg-gttctcttggatttggaaacgtttgtaaaca |
211 |
Q |
| |
|
|| ||||||||| || ||| ||||||||||| || ||| |||||| |||||||||| || |||||| |||||||||| |
|
|
| T |
38863756 |
tttgaaaatcaaatgagctaactttaaggttgagtgtctttagtgaggagttctcttgggttgggaaacatttgtaaaca |
38863835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 223
Target Start/End: Complemental strand, 3318926 - 3318741
Alignment:
| Q |
38 |
atttaggaaaatcgtgacacgatcttgcacaagtttgagcattatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaa |
137 |
Q |
| |
|
||||||| ||| ||||||||||| |||||| ||| ||| | ||||||||| ||||| ||||| ||||||||| |||||||||| ||||||| | |||| |
|
|
| T |
3318926 |
atttaggcaaaccgtgacacgattttgcactagtccgagtactatttaaggcttcattgttca-tttttgaggcagagcttcaaaagagagaaagttgag |
3318828 |
T |
|
| Q |
138 |
aaatcaaagaaggtaattttaaggttgaaggtatttggtgag-ggttctcttggatttggaaacgtttgtaaacacattggttgagt |
223 |
Q |
| |
|
|| ||||| |||||| |||| |||||| ||| ||||||| | ||||||||||| || |||||| |||| |||||| |||| ||||| |
|
|
| T |
3318827 |
aattcaaatgaggtaactttagggttgagggtctttggtgggaggttctcttgggttaggaaacatttgaaaacaccttgggtgagt |
3318741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 18141655 - 18141809
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| ||||||||| ||| ||||||||||||||||||| ||| | |||||| ||| ||||||||||| |||||| ||| |||| | || |
|
|
| T |
18141655 |
tatttaaggcttcattcttcattttt-gag-tagagcttcaagagagagaaactaggaaaatcgaaggaggtaattttagggttgagggtctttgattag |
18141752 |
T |
|
| Q |
180 |
ggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
||||||||| | || |||||| ||||||||||| |||| ||||| ||||||||||| |
|
|
| T |
18141753 |
ggttctcttaggttgggaaacatttgtaaacaccttgggcgagtgaaaatcattgag |
18141809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 29796622 - 29796503
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| |||||| |||| |||||| | | ||||| |||||||||||||| || |||||| |||||||| | || |
|
|
| T |
29796622 |
cttcaagagagagaaacttgagaaatcaaaggaggtaactttagggttgaggatctttggcgagggttctcttgggttgggaaacatttgtaaatatctt |
29796523 |
T |
|
| Q |
216 |
ggttgagtgaaatcattgag |
235 |
Q |
| |
|
|| ||||||| |||||||| |
|
|
| T |
29796522 |
gggcgagtgaattcattgag |
29796503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 4731531 - 4731646
Alignment:
| Q |
120 |
aagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggtt |
219 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| |||||||||| |||| | |
|
|
| T |
4731531 |
aagagagagaaacttgaaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaacaccttgggt |
4731629 |
T |
|
| Q |
220 |
gagtg-aaatcattgag |
235 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
4731630 |
gagtgaaaatcattgag |
4731646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 5689105 - 5689259
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| ||||||||||| | |||||||||||||||||| ||| | ||||||||| || ||| |||| |||||| ||| |||| | || |
|
|
| T |
5689105 |
tatttaaggcttcattcttcattttttg-gtaagagcttcaagagagagaaactagggaaatcaaaggagataactttagggttgagggtctttgattag |
5689203 |
T |
|
| Q |
180 |
ggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||||||||| ||||||||| |||||||||| |||| |||||| ||||||||||| |
|
|
| T |
5689204 |
ggttctcttgagtttggaaac-attgtaaacaccttgggtgagtgaaaatcattgag |
5689259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 103 - 227
Target Start/End: Original strand, 30143198 - 30143321
Alignment:
| Q |
103 |
ttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgt |
202 |
Q |
| |
|
|||||| | ||||||| |||||||||| ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| | |
|
|
| T |
30143198 |
ttttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacat |
30143297 |
T |
|
| Q |
203 |
ttgtaaacacattggttgagtgaaa |
227 |
Q |
| |
|
| ||||||||||||| ||||||||| |
|
|
| T |
30143298 |
t-gtaaacacattgggtgagtgaaa |
30143321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 3303988 - 3303850
Alignment:
| Q |
97 |
ttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttgg |
196 |
Q |
| |
|
|||||||||||||| ||| ||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | ||||||||||||| || || |
|
|
| T |
3303988 |
ttcattttttgagggggaggttcaagagagaaaaacttgggaaatcaaaggaggtaactttacggttgagggtctttgattagggttctcttgggttggg |
3303889 |
T |
|
| Q |
197 |
aaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||| |||||||||| ||| |||||| ||||||||||| |
|
|
| T |
3303888 |
aaac-attgtaaacaccttgagtgagtgaaaatcattgag |
3303850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 30291427 - 30291534
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||| ||||| ||| | |||||||||| |||||| |||| |||||| ||| |||| | || |
|
|
| T |
30291427 |
tatttaaggtttcattcttcatttttta--gtagagcttcaagaaagagaaactaggaaaatcaaaggaggtaactttagggttgatggtctttgattag |
30291524 |
T |
|
| Q |
180 |
ggttctcttg |
189 |
Q |
| |
|
|||||||||| |
|
|
| T |
30291525 |
ggttctcttg |
30291534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 1872235 - 1872173
Alignment:
| Q |
103 |
ttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttga |
165 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||| ||||||||||| |||| |||| |||||| |
|
|
| T |
1872235 |
ttttgagggagagcttcaagagagagaaacttgagaaatcaaagaaagtaactttagggttga |
1872173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 33352023 - 33352138
Alignment:
| Q |
120 |
aagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggtt |
219 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||| |||| |||||| ||| |||| | || |||||||||| || |||||| |||||||||| |||| | |
|
|
| T |
33352023 |
aagagagagaaacttgggaaatcaaagaaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaacaccttgggt |
33352121 |
T |
|
| Q |
220 |
gagtg-aaatcattgag |
235 |
Q |
| |
|
|| || ||||||||||| |
|
|
| T |
33352122 |
gattgaaaatcattgag |
33352138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 11712310 - 11712182
Alignment:
| Q |
108 |
aggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag-ggttctcttggatttggaaacgtttgt |
206 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||| |||||| |||| |||||| || ||||||||| |||| |||||| || ||| | ||||| |
|
|
| T |
11712310 |
aggtagagcttcaagagagagaaacttagggtatcaaatgaggtaactttagggttgagtgtctttggtgagaggttttcttgggttccgaagcatttgt |
11712211 |
T |
|
| Q |
207 |
aaacacattggttgagtgaaatcattgag |
235 |
Q |
| |
|
||||| |||| ||||||||||||||||| |
|
|
| T |
11712210 |
aaacatcttggatgagtgaaatcattgag |
11712182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 41266868 - 41266956
Alignment:
| Q |
148 |
aggtaattttaaggttgaaggtatttggtgag-ggttctcttggatttggaaacgtttgtaaacacattggttgagtgaaatcattgag |
235 |
Q |
| |
|
|||||| |||| ||||||| || ||||||||| ||||||||||| || ||| || ||||||| || |||| ||||||||||||||||| |
|
|
| T |
41266868 |
aggtaactttagggttgaatgtctttggtgagaggttctcttgggttgggagacagttgtaaatactttgggtgagtgaaatcattgag |
41266956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 8153652 - 8153750
Alignment:
| Q |
138 |
aaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
||||||||| |||||||||||||||||| || |||| | | ||||| |||| || |||||| |||||| |||| |||| |||||| ||||||||||| |
|
|
| T |
8153652 |
aaatcaaaggaggtaattttaaggttgagagtctttgattaatgttcttttgggttgggaaacatttgtatacaccttggatgagtgaaaatcattgag |
8153750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 1872145 - 1872089
Alignment:
| Q |
180 |
ggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||||||||||||| | |||| |||||||| ||||||| |||||| ||||||||||| |
|
|
| T |
1872145 |
ggttctcttggattggaaaacatttgtaaatacattggctgagtgaaaatcattgag |
1872089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 32902504 - 32902413
Alignment:
| Q |
97 |
ttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttg |
189 |
Q |
| |
|
||||| |||||||| || ||||||||||||||| ||||| |||||| | |||||| |||| |||||| | | | ||||||||||||||||| |
|
|
| T |
32902504 |
ttcatgttttgagg-agggcttcaagagagagaaacttgggaaatcagatgaggtaactttagggttgaggatctatggtgagggttctcttg |
32902413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 5373085 - 5373188
Alignment:
| Q |
109 |
ggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaa |
208 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||| |||||| ||||||||||| || |||||||| ||||||||||| || |||||| || |||| |
|
|
| T |
5373085 |
ggtagagtttcaagagagagaaacttgaaaaatcaaaggaggtaactttaaggttgagagtctttggtgaaggttctcttgggttgggaaacattggtaa |
5373184 |
T |
|
| Q |
209 |
acac |
212 |
Q |
| |
|
|||| |
|
|
| T |
5373185 |
acac |
5373188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 9666773 - 9666647
Alignment:
| Q |
110 |
gtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaa |
209 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||| |||| |||||| ||| |||| | ||||||||||| || |||||| |||||||| |
|
|
| T |
9666773 |
gtagagcttcaagagagagacactagggaaatcaaatgaggtaactttagggttgagggtctttgattagggttctcttcagttgggaaacatttgtaaa |
9666674 |
T |
|
| Q |
210 |
cacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
||| |||| |||||| ||||||||||| |
|
|
| T |
9666673 |
caccttgggtgagtgaaaatcattgag |
9666647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 32744729 - 32744607
Alignment:
| Q |
112 |
agagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaaca |
211 |
Q |
| |
|
|||||||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| ||||||||| |
|
|
| T |
32744729 |
agagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaaca |
32744631 |
T |
|
| Q |
212 |
cattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||||| |||||| ||||||||||| |
|
|
| T |
32744630 |
cattgg-tgagtgaaaatcattgag |
32744607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 32890937 - 32891091
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||||||||| |||||||||| || ||||||||||||||| | | ||| ||| |||||| |||||| |||| |||||| ||| |||| | || |
|
|
| T |
32890937 |
tatttaaggtttcattcttcatttttt-agaaagagcttcaagagaggaaaatttggaaagtcaaaggaggtaactttagggttgagggtctttgattag |
32891035 |
T |
|
| Q |
180 |
ggttctcttggatttggaaacgtttgtaaacacattggttgagt-gaaatcattgag |
235 |
Q |
| |
|
||||||||||| | |||||| |||||||||| |||| ||||| ||||||||||| |
|
|
| T |
32891036 |
ggttctcttggggtgggaaac-attgtaaacaccttgggtgagtaaaaatcattgag |
32891091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 29196734 - 29196627
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| ||||||||||||| |||||| ||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |
|
|
| T |
29196734 |
tatttaaggcttcattcttcattttttgag--agagctacaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattag |
29196637 |
T |
|
| Q |
180 |
ggttctcttg |
189 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29196636 |
ggttttcttg |
29196627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 29812919 - 29813051
Alignment:
| Q |
103 |
ttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgt |
202 |
Q |
| |
|
|||||| | |||| || |||||||||| ||||| ||||||||| |||||| |||| |||||| ||| |||| | | |||||||||| || |||| | | |
|
|
| T |
29812919 |
ttttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaagcat |
29813018 |
T |
|
| Q |
203 |
ttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
| ||||||||||||| |||||| ||||||||||| |
|
|
| T |
29813019 |
t-gtaaacacattgggtgagtgaaaatcattgag |
29813051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 54740090 - 54740013
Alignment:
| Q |
103 |
ttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagg |
180 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||| | |||| |||| |||||| |||| ||||||| || |||||||||| |
|
|
| T |
54740090 |
ttttgaggtagatcttcaagagaaagaaacttaagaaattaaaggaggtaactttagggttgaaagtctttggtgagg |
54740013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 1314037 - 1313986
Alignment:
| Q |
184 |
ctcttggatttggaaacgtttgtaaacacattggttgagtgaaatcattgag |
235 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |||| |||||||||| |||||| |
|
|
| T |
1314037 |
ctcttggattgggaaacatttgtaaacaccttgggtgagtgaaattattgag |
1313986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 40519503 - 40519448
Alignment:
| Q |
110 |
gtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttga |
165 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||| || |||||||| |||||| |
|
|
| T |
40519503 |
gtagagcttcaagagagagaaacttgagaaatcaaatgagataattttagggttga |
40519448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 29810759 - 29810847
Alignment:
| Q |
138 |
aaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggttgagtgaaa |
227 |
Q |
| |
|
||||||||| ||||||||||| |||||| ||| |||| | || ||||| |||| || |||||| |||||||||| |||| ||||||||| |
|
|
| T |
29810759 |
aaatcaaaggaggtaattttagggttgagggtctttgattagagttcttttgggttgggaaac-attgtaaacaccttgggtgagtgaaa |
29810847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 44700715 - 44700658
Alignment:
| Q |
179 |
gggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||||||||||| || |||||| ||||||||||| |||| |||||| ||||||||||| |
|
|
| T |
44700715 |
gggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgag |
44700658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 44700795 - 44700718
Alignment:
| Q |
112 |
agagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttg |
189 |
Q |
| |
|
|||||||||||||||||| ||| | ||||||||| |||||| |||| |||||| ||| |||| | |||||| ||||| |
|
|
| T |
44700795 |
agagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgatggtctttgattagggttatcttg |
44700718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 22835301 - 22835182
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| |||||||||| |||||| |||| |||||| ||| |||| | || ||||||||| || |||||| |||||| ||| || |
|
|
| T |
22835301 |
cttcaagagaggaaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgtgttgggaaac-attgtaatcacctt |
22835203 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||||| ||||||||||| |
|
|
| T |
22835202 |
gggtgagtgaaaatcattgag |
22835182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 29196623 - 29196567
Alignment:
| Q |
180 |
ggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
||||||||||| || |||||| ||||||||||| |||| |||||| ||||||||||| |
|
|
| T |
29196623 |
ggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgag |
29196567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 39153660 - 39153541
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| |||||||||| || |
|
|
| T |
39153660 |
cttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaacacctt |
39153562 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| ||| || ||||||||||| |
|
|
| T |
39153561 |
gggtgaatgaaaatcattgag |
39153541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 51352426 - 51352374
Alignment:
| Q |
117 |
ttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggt |
169 |
Q |
| |
|
||||||||||||| |||| ||||||||| ||||||||||| |||||||||| |
|
|
| T |
51352426 |
ttcaagagagagaaacttcggaaatcaaaggaggtaattttagggttgaaggt |
51352374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 4253830 - 4253709
Alignment:
| Q |
115 |
gcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacat |
214 |
Q |
| |
|
|||| |||||||||| ||||| ||||||||| |||||| |||| |||||| |||||||||||||||||||||||| || | |||| ||||||||||| | |
|
|
| T |
4253830 |
gctttaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttggtgagggttctcttgggttggaaaacatttgtaaacacct |
4253731 |
T |
|
| Q |
215 |
tggttgagtg-aaatcattgag |
235 |
Q |
| |
|
| | |||||| ||||||||||| |
|
|
| T |
4253730 |
taggtgagtgaaaatcattgag |
4253709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 36574814 - 36574704
Alignment:
| Q |
117 |
ttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattg |
216 |
Q |
| |
|
||||||||||||| | |||| ||||||||| |||||| |||| |||||| ||| |||| ||||||||||||||| || | |||| ||||||||||| || |
|
|
| T |
36574814 |
ttcaagagagagaaaattgagaaatcaaaggaggtaactttagggttgacggtctttgatgagggttctcttgggttggaaaacatttgtaaacacctta |
36574715 |
T |
|
| Q |
217 |
gttgagtgaaa |
227 |
Q |
| |
|
| ||||||||| |
|
|
| T |
36574714 |
ggtgagtgaaa |
36574704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 26639083 - 26639199
Alignment:
| Q |
48 |
atcgtgacacgatcttgcacaagtttgagcattatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaaga |
147 |
Q |
| |
|
||||||||||||| ||| || |||||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||| || |||| ||||||||| |
|
|
| T |
26639083 |
atcgtgacacgattttgaactagtttgagcactatttaaggcttcatggttcattttctgaggta-tgcttcaagagagtgaaacttaggaaatcaaagg |
26639181 |
T |
|
| Q |
148 |
aggtaattttaaggttga |
165 |
Q |
| |
|
|| ||| |||| |||||| |
|
|
| T |
26639182 |
agataactttagggttga |
26639199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 227
Target Start/End: Complemental strand, 2761614 - 2761491
Alignment:
| Q |
103 |
ttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgt |
202 |
Q |
| |
|
|||||| | ||||||| |||||||| | ||||| ||||||||| |||||| |||| |||||| | |||||| | || |||||||||| || |||||| | |
|
|
| T |
2761614 |
ttttgaaggagagcttgaagagagataaacttgggaaatcaaaggaggtaactttagggttgatgatatttgattagagttctcttgggttgggaaacat |
2761515 |
T |
|
| Q |
203 |
ttgtaaacacattggttgagtgaaa |
227 |
Q |
| |
|
| ||||||||||||| ||||||||| |
|
|
| T |
2761514 |
t-gtaaacacattgggtgagtgaaa |
2761491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 47674245 - 47674123
Alignment:
| Q |
113 |
gagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacac |
212 |
Q |
| |
|
|||||| |||||||||| ||||| ||||||||| |||||| || |||||||||||| |||| | || |||||||||| ||||||| |||||||||| |
|
|
| T |
47674245 |
gagcttgaagagagagaaacttgggaaatcaaaggaggtaacttcaaggttgaaggtctttgattagagttctcttgg-gttggaaaacattgtaaacac |
47674147 |
T |
|
| Q |
213 |
attggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||| |||||| ||||||||||| |
|
|
| T |
47674146 |
cttgggtgagtgaaaatcattgag |
47674123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 8153164 - 8153271
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||||||||| ||||||||| ||| |||||||||||||||||| ||| | |||||||||| |||||| |||||||||| ||| |||| | || |
|
|
| T |
8153164 |
tatttaaggtttcattcttcattttt-gaga-agagcttcaagagagagaaactaggaaaatcaaaggaggtaactttaaggttgggggtctttgattag |
8153261 |
T |
|
| Q |
180 |
ggttctcttg |
189 |
Q |
| |
|
||| |||||| |
|
|
| T |
8153262 |
ggtcctcttg |
8153271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 12098206 - 12098098
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| ||||||||||| || |||||||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |
|
|
| T |
12098206 |
tatttaaggcttcattcttcattttttg-ggaagagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattag |
12098108 |
T |
|
| Q |
180 |
ggttctcttg |
189 |
Q |
| |
|
|||| ||||| |
|
|
| T |
12098107 |
ggttttcttg |
12098098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 41317781 - 41317673
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| ||||||||||| | |||||||||||||||||| ||| | ||||||||| |||||| |||| |||||| ||| |||| | || |
|
|
| T |
41317781 |
tatttaaggcttcattcttcattttttg-gtaagagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattag |
41317683 |
T |
|
| Q |
180 |
ggttctcttg |
189 |
Q |
| |
|
|||||||||| |
|
|
| T |
41317682 |
ggttctcttg |
41317673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 36146759 - 36146679
Alignment:
| Q |
77 |
cattatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaatttta |
158 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| || |||||||||||||||| | ||||| ||||||||| |||||| |||| |
|
|
| T |
36146759 |
cattatttaaggcttcattcttcattttttg-ggaagagcttcaagagagaaaaacttgggaaatcaaaggaggtaacttta |
36146679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 23565363 - 23565251
Alignment:
| Q |
112 |
agagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaaca |
211 |
Q |
| |
|
|||||||||||||||||| ||||| | ||||||| |||||| |||| |||| | ||| |||| | ||| ||||||||| || | |||| |||||||||| |
|
|
| T |
23565363 |
agagcttcaagagagagaaacttgggatatcaaaggaggtaacttta-ggttaagggtctttgattagg-ttctcttggtttagaaaacatttgtaaaca |
23565266 |
T |
|
| Q |
212 |
cattggttgagtgaa |
226 |
Q |
| |
|
| |||| |||||||| |
|
|
| T |
23565265 |
ccttgggtgagtgaa |
23565251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 31105723 - 31105634
Alignment:
| Q |
84 |
taaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttg |
174 |
Q |
| |
|
||||||||||| ||| |||||| ||| ||||||||||||||| | |||||| ||||||||| |||||| |||| |||||| ||| |||| |
|
|
| T |
31105723 |
taaggtttcattcttc-ttttttaaggaagagcttcaagagaggaaaacttgagaaatcaaaggaggtaactttagggttgagggtctttg |
31105634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 496260 - 496172
Alignment:
| Q |
138 |
aaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggttgagtgaaa |
227 |
Q |
| |
|
|||||||| |||||| ||||||||||| ||| |||| | || ||||||||||||| |||||| ||||||| || |||| ||||||||| |
|
|
| T |
496260 |
aaatcaaatgaggtaactttaaggttgagggtctttgattagagttctcttggattgggaaac-attgtaaaaaccttgggtgagtgaaa |
496172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 26417200 - 26417269
Alignment:
| Q |
131 |
acttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaac |
200 |
Q |
| |
|
|||||| ||||||||| |||||| |||| |||||| ||| |||| | || ||||||||||||| |||||| |
|
|
| T |
26417200 |
acttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttggattgggaaac |
26417269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 24526200 - 24526077
Alignment:
| Q |
112 |
agagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaaca |
211 |
Q |
| |
|
|||||||||||||||| | ||| | ||||||||| || ||| |||| |||||| ||| |||| | | ||||||||| | || |||||| ||||||||| |
|
|
| T |
24526200 |
agagcttcaagagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgattatggttctcttaggttgggaaac-attgtaaaca |
24526102 |
T |
|
| Q |
212 |
cattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
| |||| |||||| ||||||||||| |
|
|
| T |
24526101 |
ccttgggtgagtgaaaatcattgag |
24526077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 36146644 - 36146588
Alignment:
| Q |
180 |
ggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
||||||||||| || |||||| ||||||||||| |||| |||||| ||||||||||| |
|
|
| T |
36146644 |
ggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgag |
36146588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 38671521 - 38671402
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| |||||||||| || |
|
|
| T |
38671521 |
cttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaacacctt |
38671423 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||| | ||||||||||| |
|
|
| T |
38671422 |
gggtgagcgaaaatcattgag |
38671402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 227
Target Start/End: Complemental strand, 12123890 - 12123773
Alignment:
| Q |
110 |
gtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaa |
209 |
Q |
| |
|
|||||| ||| |||| |||| |||||||||||||||| |||||| ||||||||||| ||| |||||| || |||||||| | || |||||| ||| |||| |
|
|
| T |
12123890 |
gtagagtttcgagagggagaaacttgaaaaatcaaagtaggtaactttaaggttgatggtctttggttagagttctcttaggttgggaaacatttataaa |
12123791 |
T |
|
| Q |
210 |
cacattggttgagtgaaa |
227 |
Q |
| |
|
||| |||| ||||||||| |
|
|
| T |
12123790 |
caccttggatgagtgaaa |
12123773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 227
Target Start/End: Complemental strand, 33162783 - 33162639
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| |||||||||| ||||| ||||||||||||| ||||| ||||||||| ||||||||||| |||||| ||| |||| | || |
|
|
| T |
33162783 |
tatttaaggcttcattcttcatttttta--gtagaatttcaagagagagaaacttgggaaatcaaaggaggtaattttagggttgagggtctttgattag |
33162686 |
T |
|
| Q |
180 |
ggttctcttggatttggaaacgtttgtaaacacattggttgagtgaaa |
227 |
Q |
| |
|
|||||||||| || |||||| |||||||||| |||| ||| ||||| |
|
|
| T |
33162685 |
ggttctcttgagttgggaaac-attgtaaacaccttgggtgattgaaa |
33162639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 34140075 - 34139951
Alignment:
| Q |
111 |
tagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaac |
210 |
Q |
| |
|
|||| ||||||||||| | ||||| |||||||||| |||||| |||| ||||||| || |||| | || |||||||||| || |||||| |||||||| |
|
|
| T |
34140075 |
tagaacttcaagagaggaaaacttggaaaatcaaaggaggtaactttagggttgaaagtctttgattagagttctcttgggttgggaaac-attgtaaac |
34139977 |
T |
|
| Q |
211 |
acattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||| |||||| ||||||||||| |
|
|
| T |
34139976 |
accttgggtgagtgaaaatcattgag |
34139951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 11049392 - 11049474
Alignment:
| Q |
102 |
tttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttct |
185 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||| ||||||||| |||||| |||| |||||| ||| |||| | |||||||| |
|
|
| T |
11049392 |
tttttgagatagagcttcaagagagagaaacttgggaaatcaaaggaggtaa-tttagggttgatggtctttgattagggttct |
11049474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 36773413 - 36773491
Alignment:
| Q |
111 |
tagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttg |
189 |
Q |
| |
|
||||||||||||||||||| ||| | ||||||||| |||||| |||| |||||| ||| |||| | |||||||||||| |
|
|
| T |
36773413 |
tagagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttg |
36773491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 11151890 - 11151771
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| |||||||||| || |
|
|
| T |
11151890 |
cttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaacacctt |
11151792 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||||| ||||||||||| |
|
|
| T |
11151791 |
gggtgagtgaaaatcattgag |
11151771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 42362221 - 42362340
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| |||||||||| || |
|
|
| T |
42362221 |
cttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaacacctt |
42362319 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||||| ||||||||||| |
|
|
| T |
42362320 |
gggtgagtgaaaatcattgag |
42362340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 2837156 - 2837094
Alignment:
| Q |
103 |
ttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttga |
165 |
Q |
| |
|
|||||| | |||| || |||||||||| ||||| ||||||||| |||||||||||||||||| |
|
|
| T |
2837156 |
ttttgaaggagagtttgaagagagagaaacttgggaaatcaaaggaggtaattttaaggttga |
2837094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 13121703 - 13121757
Alignment:
| Q |
182 |
ttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
||||||||| || |||||| |||||||||||||||| |||||| ||||||||||| |
|
|
| T |
13121703 |
ttctcttgggttgggaaacatttgtaaacacattgggtgagtgaaaatcattgag |
13121757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 42020167 - 42020053
Alignment:
| Q |
121 |
agagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggttg |
220 |
Q |
| |
|
||||||||| | ||||||||||||| |||||| ||||||||| | ||||||| ||| |||||||||| || ||| |||||||||| ||| || |
|
|
| T |
42020167 |
agagagagaaatttgaaaaatcaaatgaggtaaatttaaggtttagagtatttgatgaaggttctcttgagttgataaatatttgtaaacatcgtgggtg |
42020068 |
T |
|
| Q |
221 |
agtgaaatcattgag |
235 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
42020067 |
agtgaaatcattgag |
42020053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 11067143 - 11067210
Alignment:
| Q |
97 |
ttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttga |
165 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| ||| | ||||||||| |||||| |||| |||||| |
|
|
| T |
11067143 |
ttcattttttgagg-agggcttcaagagagagaaactagggaaatcaaaggaggtaactttatggttga |
11067210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 11690370 - 11690489
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | | |||||||||| || |||||| |||||||||| || |
|
|
| T |
11690370 |
cttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattatagttctcttgggttgggaaac-attgtaaacacctt |
11690468 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||||| ||||||||||| |
|
|
| T |
11690469 |
gggtgagtgaaaatcattgag |
11690489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 29867734 - 29867857
Alignment:
| Q |
112 |
agagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaaca |
211 |
Q |
| |
|
||||||| |||||||||| |||| ||||||||||||||| | | |||||| ||| |||| | || |||||||||| || |||||| ||||||||| |
|
|
| T |
29867734 |
agagcttaaagagagagaaactttgggaatcaaagaaggtaactattgggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaaca |
29867832 |
T |
|
| Q |
212 |
cattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
| |||| |||||| ||||||||||| |
|
|
| T |
29867833 |
ccttgggtgagtgaaaatcattgag |
29867857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 49918205 - 49918338
Alignment:
| Q |
103 |
ttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgt |
202 |
Q |
| |
|
|||||| ||||||||| |||||||||| ||||| ||||||||| |||||| |||| |||||||||| |||| | || ||||||||||||| |||||| | |
|
|
| T |
49918205 |
ttttgaagtagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaaggtctttgattagagttctcttggattgggaaacat |
49918304 |
T |
|
| Q |
203 |
ttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
| |||||| |||| |||||| ||||||||||| |
|
|
| T |
49918305 |
tataaaacaccttgggtgagtgaaaatcattgag |
49918338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 13138287 - 13138154
Alignment:
| Q |
102 |
tttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacg |
201 |
Q |
| |
|
||||||||| |||||||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | ||||||||||||| | |||||| |
|
|
| T |
13138287 |
tttttgaggaagagcttcaagagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttggggtgggaaac- |
13138189 |
T |
|
| Q |
202 |
tttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||||||||| |||| |||||| ||||||||||| |
|
|
| T |
13138188 |
attgtaaacaccttgggtgagtgaaaatcattgag |
13138154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 37560181 - 37560049
Alignment:
| Q |
103 |
ttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgt |
202 |
Q |
| |
|
|||||| ||| ||||| |||||||||| |||||| |||||||| |||||| ||||||||||| ||| |||| | || |||||||||| |||| |||| |
|
|
| T |
37560181 |
ttttgaagtaaagcttgaagagagagaaacttgagaaatcaaatgaggtaactttaaggttgagggtctttgattagagttctcttgggtttgaaaac-a |
37560083 |
T |
|
| Q |
203 |
ttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
||||||||||||| | |||||| ||||||||||| |
|
|
| T |
37560082 |
ttgtaaacacattaggtgagtgaaaatcattgag |
37560049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 227
Target Start/End: Complemental strand, 928296 - 928166
Alignment:
| Q |
97 |
ttcattttttgaggtagagcttcaagagagagaca-cttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttg |
195 |
Q |
| |
|
|||||||||| ||| |||||||||| ||||| | | |||| ||||||||| |||||| |||| |||||||||| |||| | ||| ||||||||| || | |
|
|
| T |
928296 |
ttcatttttt-agggagagcttcaaaagagaaaaaacttgggaaatcaaaggaggtaactttatggttgaaggtctttgattaggattctcttgggttgg |
928198 |
T |
|
| Q |
196 |
gaaacgtttgtaaacacattggttgagtgaaa |
227 |
Q |
| |
|
||||| ||||||||||| |||| ||||||||| |
|
|
| T |
928197 |
gaaacatttgtaaacaccttgggtgagtgaaa |
928166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 2263273 - 2263159
Alignment:
| Q |
121 |
agagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggttg |
220 |
Q |
| |
|
||||||||| || ||| || |||| | ||||||||||| |||||| || ||||||||||||||||||| || ||||| |||||||||| ||||| | |
|
|
| T |
2263273 |
agagagagaaacatgagaagtcaagggaggtaattttagggttgagtgtctttggtgagggttctcttgagttaggaaatatttgtaaacatcttggtcg |
2263174 |
T |
|
| Q |
221 |
agtgaaatcattgag |
235 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
2263173 |
agtgaaatcattgag |
2263159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 1833395 - 1833510
Alignment:
| Q |
120 |
aagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacattggtt |
219 |
Q |
| |
|
|||||||||| ||||| ||||||||| || ||| ||||||||||| ||| |||| | || ||||||||||||| |||||| |||||||||| |||| | |
|
|
| T |
1833395 |
aagagagagaaacttgggaaatcaaaggagataactttaaggttgagggtctttgattagagttctcttggattgggaaac-attgtaaacaccttgggt |
1833493 |
T |
|
| Q |
220 |
gagtg-aaatcattgag |
235 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
1833494 |
gagtgaaaatcattgag |
1833510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 197221 - 197088
Alignment:
| Q |
102 |
tttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacg |
201 |
Q |
| |
|
|||||||| ||| ||||||||||| | ||||| |||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| |
|
|
| T |
197221 |
tttttgagtgagaacttcaagagaggaaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac- |
197123 |
T |
|
| Q |
202 |
tttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||||||||| |||| |||||| ||||||||||| |
|
|
| T |
197122 |
attgtaaacaccttgggtgagtgaaaatcattgag |
197088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 777063 - 777172
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| |||||||||| | |||||||||||||||||| ||| | ||||||||| |||||| |||| |||||| ||| |||| | || |
|
|
| T |
777063 |
tatttaaggattcattcttcatttttttggtaagagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgatggtctttgattag |
777162 |
T |
|
| Q |
180 |
ggttctcttg |
189 |
Q |
| |
|
|||||||||| |
|
|
| T |
777163 |
ggttctcttg |
777172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 50167522 - 50167414
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| ||||||||||| | |||||||||||||||||| ||| | ||||||||| |||||| |||| |||||| ||| |||| | || |
|
|
| T |
50167522 |
tatttaaggcttcattcttcattttttg-gtaagagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattag |
50167424 |
T |
|
| Q |
180 |
ggttctcttg |
189 |
Q |
| |
|
|||||||||| |
|
|
| T |
50167423 |
ggttctcttg |
50167414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 50169544 - 50169390
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| ||||| ||||||||||| | |||||||||||||||||| ||| | ||||||||| |||||| |||| |||||| ||| ||| | || |
|
|
| T |
50169544 |
tatttaaggcttcattcttcattttttg-gtaagagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggttttttattag |
50169446 |
T |
|
| Q |
180 |
ggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||| |||||| || |||||| ||||||| || |||| |||||| ||||||||||| |
|
|
| T |
50169445 |
ggttatcttgggttgggaaac-attgtaaataccttgggtgagtgaaaatcattgag |
50169390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 46064783 - 46064906
Alignment:
| Q |
112 |
agagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaaca |
211 |
Q |
| |
|
|||||||||||||||| | ||||| |||||||||||||||| |||| ||||| ||| |||| | | ||||||||||| |||||| ||||||||| |
|
|
| T |
46064783 |
agagcttcaagagagaaaaacttgggaaatcaaagaaggtaactttattgttgagggtctttgattatggttctcttgg-ggtggaaaacattgtaaaca |
46064881 |
T |
|
| Q |
212 |
cattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
| |||| |||||| ||||||||||| |
|
|
| T |
46064882 |
ccttgggtgagtgaaaatcattgag |
46064906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 23555584 - 23555454
Alignment:
| Q |
96 |
gttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttg |
195 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | ||||| ||||||||| |||||| || | |||||| | | |||| | | |||||||||| || | |
|
|
| T |
23555584 |
gttcattttttgagagagagcttcaagagagaaaaacttgggaaatcaaaggaggtaacttcagggttgaggatctttgattaaagttctcttgggttgg |
23555485 |
T |
|
| Q |
196 |
gaaacgtttgtaaacacattggttgagtgaaa |
227 |
Q |
| |
|
||||| |||||||||| |||| ||| ||||| |
|
|
| T |
23555484 |
gaaac-attgtaaacaccttgggtgaatgaaa |
23555454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 15820162 - 15820295
Alignment:
| Q |
102 |
tttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacg |
201 |
Q |
| |
|
|||||||| || ||||||||||||| | ||||| |||||||| |||||| |||| |||||| ||| |||| | || ||||||||| || |||||| |
|
|
| T |
15820162 |
tttttgagagagggcttcaagagagaaaaacttgggaaatcaaaagaggtaactttagggttgagggtctttgattagagttctcttgagttgggaaac- |
15820260 |
T |
|
| Q |
202 |
tttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||||||||| |||| |||||| ||||||||||| |
|
|
| T |
15820261 |
attgtaaacaccttgggtgagtgaaaatcattgag |
15820295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 28265896 - 28265807
Alignment:
| Q |
84 |
taaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttg |
174 |
Q |
| |
|
||||| ||||| ||||||||||| || |||||||||||||||||| ||| | ||||||||| |||||| |||| |||||| ||| |||| |
|
|
| T |
28265896 |
taaggcttcattcttcattttttg-ggaagagcttcaagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttg |
28265807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 3847420 - 3847301
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |||||| |||| ||| || ||| |||| | || |||||||||| || |||||| |||||||||| || |
|
|
| T |
3847420 |
cttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggtcgagggtctttgattagagttctcttgggttgggaaac-attgtaaacacctt |
3847322 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||||| ||||||||||| |
|
|
| T |
3847321 |
gggtgagtgaaaatcattgag |
3847301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 45644689 - 45644582
Alignment:
| Q |
80 |
tatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgag |
179 |
Q |
| |
|
||||||||| || || ||||||||||| || |||||||||||||||| | ||| | ||||||||| || ||| |||| |||||| ||| |||| | || |
|
|
| T |
45644689 |
tatttaaggctttattcttcattttttg-ggaagagcttcaagagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgattag |
45644591 |
T |
|
| Q |
180 |
ggttctctt |
188 |
Q |
| |
|
||||||||| |
|
|
| T |
45644590 |
ggttctctt |
45644582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 3325774 - 3325899
Alignment:
| Q |
108 |
aggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgta |
207 |
Q |
| |
|
||||||||||| |||||||||| | ||| |||||||| | ||||||||| ||| || || ||||||||| ||||||||| || ||||| |||||| |
|
|
| T |
3325774 |
aggtagagctttaagagagagaaaattgggaaatcaaaaagagtaattttagggtcgagtgtctttggtgagtgttctcttgagttgagaaacatttgta |
3325873 |
T |
|
| Q |
208 |
aacacattggttgagtgaaatcattg |
233 |
Q |
| |
|
||||| |||| ||||||||| ||||| |
|
|
| T |
3325874 |
aacaccttgggtgagtgaaaccattg |
3325899 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 42926758 - 42926881
Alignment:
| Q |
112 |
agagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaaca |
211 |
Q |
| |
|
|||||||||||||||| | ||||| |||||||| |||||| |||| | |||| ||| |||| | || ||||||||||||| |||||| ||||||||| |
|
|
| T |
42926758 |
agagcttcaagagagaaaaacttgggaaatcaaatgaggtaactttaggattgatggtctttgattagagttctcttggattgggaaac-attgtaaaca |
42926856 |
T |
|
| Q |
212 |
cattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
| |||| |||||| ||||||||||| |
|
|
| T |
42926857 |
ccttgggtgagtgaaaatcattgag |
42926881 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 5007367 - 5007469
Alignment:
| Q |
62 |
ttgcacaagtttgagcattatttaaggtttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaagg |
161 |
Q |
| |
|
|||||| ||| || ||||||||||||| ||||| ||||| ||||| |||||| |||| |||||||| | |||| |||||||||| |||||| |||| || |
|
|
| T |
5007367 |
ttgcactagtatgcgcattatttaaggcttcattgttca-tttttaaggtagggctttaagagagaaaaacttagaaaatcaaaggaggtaactttaggg |
5007465 |
T |
|
| Q |
162 |
ttga |
165 |
Q |
| |
|
|||| |
|
|
| T |
5007466 |
ttga |
5007469 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 5887715 - 5887605
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |||||| |||| |||||| |||||||| | || |||||||||| || |||||| |||||||||| || |
|
|
| T |
5887715 |
cttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtatttgattagagttctcttgggttgggaaac-attgtaaacacctt |
5887617 |
T |
|
| Q |
216 |
ggttgagtgaaa |
227 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
5887616 |
gggtgagtgaaa |
5887605 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 30683232 - 30683101
Alignment:
| Q |
103 |
ttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgt |
202 |
Q |
| |
|
|||||| | ||||||| |||||||||| ||||| |||||| || ||||||||||| |||||| ||| |||| | || |||||||||| || ||||| |
|
|
| T |
30683232 |
ttttgaaggagagcttgaagagagagaaacttgggaaatcagaggaggtaattttagggttgagggtctttgattagagttctcttgggttgcgaaac-a |
30683134 |
T |
|
| Q |
203 |
ttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||||||||| |||| |||||| ||||||||||| |
|
|
| T |
30683133 |
ttgtaaacaccttgg-tgagtgaaaatcattgag |
30683101 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 16451936 - 16452051
Alignment:
| Q |
102 |
tttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacg |
201 |
Q |
| |
|
||||||||| ||||||||||||||| | ||||| ||||||||| |||||| |||| |||||| | | |||| | || |||||||||| || |||||| |
|
|
| T |
16451936 |
tttttgaggaagagcttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggatctttgattagagttctcttgggttcggaaac- |
16452034 |
T |
|
| Q |
202 |
tttgtaaacacattggt |
218 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
16452035 |
attgtaaacaccttggt |
16452051 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 13696028 - 13695931
Alignment:
| Q |
90 |
ttcatggttcattttttgaggtagagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttg |
189 |
Q |
| |
|
||||| ||||||||||||| | || |||| |||||||||| |||||| |||||||||||| || |||| |||||| || |||||||| |||||||||| |
|
|
| T |
13696028 |
ttcattgttcattttttgaag-agtgctttaagagagagaaacttgagaaatcaaagaagatagctttagggttgagtgtctttggtga-ggttctcttg |
13695931 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 31182842 - 31182961
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |||||| |||| |||||| ||| |||| | || |||||||||| || |||||| |||||||||| || |
|
|
| T |
31182842 |
cttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaacacctt |
31182940 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
| |||||| ||||||||||| |
|
|
| T |
31182941 |
aggtgagtgaaaatcattgag |
31182961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 114456 - 114532
Alignment:
| Q |
113 |
gagcttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttg |
189 |
Q |
| |
|
|||||| |||||||||| |||||| ||||||||| |||||| |||| |||||| ||| |||| | |||||||||||| |
|
|
| T |
114456 |
gagcttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttg |
114532 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 19183 - 19119
Alignment:
| Q |
171 |
tttggtgagggttctcttggatttggaaacgtttgtaaacacattggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|||||||||||||||||||| || |||||| ||||||||||| |||| |||||| ||||||||||| |
|
|
| T |
19183 |
tttggtgagggttctcttgggttgggaaacatttgtaaacac-ttgggtgagtgaaaatcattgag |
19119 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 28137707 - 28137588
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| |||||||||| || ||| |||| |||||| ||| |||| | || |||||||||| || |||||| |||||||||| || |
|
|
| T |
28137707 |
cttcaagagaggaaaacttggaaaatcaaaggagttaactttagggttgagggtctttgattagagttctcttgggttgggaaac-attgtaaacacctt |
28137609 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||||| ||||||||||| |
|
|
| T |
28137608 |
gggtgagtgaaaatcattgag |
28137588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 16567075 - 16567194
Alignment:
| Q |
116 |
cttcaagagagagacacttgaaaaatcaaagaaggtaattttaaggttgaaggtatttggtgagggttctcttggatttggaaacgtttgtaaacacatt |
215 |
Q |
| |
|
||||||||||| | ||||| ||||||||| || ||| |||| |||| | ||| |||| | || |||||||||| ||||||||| |||||||||| || |
|
|
| T |
16567075 |
cttcaagagaggaaaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggtttggaaac-attgtaaacacctt |
16567173 |
T |
|
| Q |
216 |
ggttgagtg-aaatcattgag |
235 |
Q |
| |
|
|| |||||| ||||||||||| |
|
|
| T |
16567174 |
gggtgagtgaaaatcattgag |
16567194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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