View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18602_low_1 (Length: 759)

Name: NF18602_low_1
Description: NF18602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18602_low_1
NF18602_low_1
[»] chr7 (32 HSPs)
chr7 (1-422)||(38123085-38123506)
chr7 (489-741)||(38123571-38123823)
chr7 (516-676)||(45557358-45557518)
chr7 (489-673)||(40561663-40561847)
chr7 (516-673)||(27571858-27572015)
chr7 (516-729)||(17111797-17111998)
chr7 (525-673)||(40491574-40491722)
chr7 (580-673)||(41386811-41386904)
chr7 (601-671)||(30182313-30182383)
chr7 (580-673)||(597942-598034)
chr7 (549-673)||(41788312-41788436)
chr7 (540-651)||(22310415-22310526)
chr7 (538-674)||(9183869-9184005)
chr7 (526-727)||(12306658-12306866)
chr7 (535-634)||(25156235-25156334)
chr7 (583-673)||(45005016-45005106)
chr7 (664-740)||(15050203-15050279)
chr7 (539-630)||(40795944-40796035)
chr7 (684-731)||(45004905-45004952)
chr7 (602-666)||(37277597-37277661)
chr7 (539-622)||(44570695-44570778)
chr7 (516-614)||(33853416-33853514)
chr7 (540-590)||(41010035-41010085)
chr7 (549-625)||(44365567-44365642)
chr7 (612-671)||(5489874-5489933)
chr7 (666-729)||(6996457-6996520)
chr7 (652-711)||(38453308-38453367)
chr7 (577-636)||(42816461-42816520)
chr7 (524-606)||(21435938-21436020)
chr7 (620-670)||(28725088-28725138)
chr7 (524-614)||(42668170-42668260)
chr7 (587-624)||(18349820-18349857)
[»] chr3 (52 HSPs)
chr3 (526-741)||(3776449-3776665)
chr3 (525-661)||(35253408-35253544)
chr3 (525-673)||(37334975-37335123)
chr3 (489-661)||(51285578-51285750)
chr3 (516-674)||(5406901-5407053)
chr3 (525-668)||(35264352-35264495)
chr3 (580-666)||(27266790-27266876)
chr3 (519-634)||(46853469-46853584)
chr3 (577-673)||(7717321-7717410)
chr3 (525-646)||(31708180-31708301)
chr3 (586-673)||(35058357-35058445)
chr3 (577-727)||(38332547-38332698)
chr3 (525-671)||(584734-584879)
chr3 (557-673)||(25359547-25359663)
chr3 (578-669)||(36302183-36302274)
chr3 (583-671)||(30300997-30301086)
chr3 (568-673)||(40147834-40147939)
chr3 (583-671)||(37703097-37703185)
chr3 (662-741)||(3845208-3845287)
chr3 (525-666)||(31013021-31013162)
chr3 (684-741)||(52925729-52925786)
chr3 (542-646)||(41596107-41596211)
chr3 (602-728)||(21513364-21513491)
chr3 (525-675)||(32111988-32112138)
chr3 (568-669)||(5046064-5046165)
chr3 (673-741)||(5406816-5406884)
chr3 (601-669)||(44958623-44958691)
chr3 (577-671)||(4526130-4526224)
chr3 (525-571)||(46943261-46943307)
chr3 (527-609)||(51667195-51667277)
chr3 (664-741)||(1441479-1441556)
chr3 (664-733)||(7717471-7717540)
chr3 (688-741)||(21007763-21007816)
chr3 (658-742)||(25129613-25129698)
chr3 (618-671)||(35058065-35058118)
chr3 (638-679)||(40339216-40339257)
chr3 (638-675)||(41115416-41115453)
chr3 (605-649)||(23187865-23187909)
chr3 (525-646)||(32523275-32523402)
chr3 (577-624)||(190871-190918)
chr3 (684-731)||(12674933-12674980)
chr3 (516-595)||(14022047-14022126)
chr3 (666-729)||(39256597-39256660)
chr3 (613-672)||(44771691-44771750)
chr3 (664-742)||(41115460-41115538)
chr3 (616-726)||(42375468-42375578)
chr3 (616-726)||(42404182-42404292)
chr3 (583-673)||(52364047-52364137)
chr3 (679-728)||(1290704-1290753)
chr3 (601-661)||(3845130-3845191)
chr3 (664-741)||(5046174-5046251)
chr3 (563-627)||(33791984-33792049)
[»] chr1 (60 HSPs)
chr1 (586-738)||(8381897-8382049)
chr1 (535-671)||(48548965-48549099)
chr1 (525-662)||(7524120-7524257)
chr1 (552-674)||(10324906-10325028)
chr1 (562-671)||(1514341-1514450)
chr1 (526-671)||(28083831-28083975)
chr1 (516-671)||(20026096-20026251)
chr1 (523-674)||(9939668-9939818)
chr1 (577-676)||(11049243-11049342)
chr1 (603-667)||(3515820-3515884)
chr1 (568-671)||(3016160-3016263)
chr1 (585-676)||(28287337-28287428)
chr1 (539-674)||(52339683-52339818)
chr1 (578-661)||(213531-213616)
chr1 (582-674)||(6021799-6021891)
chr1 (558-726)||(30557441-30557613)
chr1 (545-662)||(20720823-20720937)
chr1 (578-668)||(30850393-30850483)
chr1 (589-674)||(47892393-47892478)
chr1 (586-674)||(7790644-7790732)
chr1 (579-671)||(47321902-47321993)
chr1 (545-624)||(1233350-1233429)
chr1 (607-669)||(33693020-33693083)
chr1 (516-646)||(34915089-34915219)
chr1 (492-632)||(6932092-6932232)
chr1 (516-634)||(47053441-47053564)
chr1 (70-141)||(31829340-31829411)
chr1 (546-659)||(39395898-39396016)
chr1 (684-741)||(15478119-15478176)
chr1 (580-673)||(24587905-24588001)
chr1 (525-649)||(31362692-31362813)
chr1 (556-665)||(32370003-32370112)
chr1 (586-671)||(38797631-38797716)
chr1 (605-673)||(1003818-1003886)
chr1 (604-671)||(52013498-52013566)
chr1 (562-626)||(52263625-52263689)
chr1 (545-663)||(27849145-27849264)
chr1 (525-599)||(5268289-5268363)
chr1 (517-587)||(5868165-5868235)
chr1 (556-741)||(18325080-18325266)
chr1 (580-622)||(27500332-27500374)
chr1 (664-729)||(49079312-49079377)
chr1 (583-659)||(6041485-6041560)
chr1 (594-634)||(17284131-17284171)
chr1 (605-649)||(29759632-29759676)
chr1 (489-625)||(34571088-34571223)
chr1 (616-672)||(37522942-37522998)
chr1 (613-665)||(51500863-51500915)
chr1 (668-735)||(20720733-20720799)
chr1 (666-725)||(24587835-24587894)
chr1 (575-630)||(37133486-37133541)
chr1 (601-671)||(43018461-43018532)
chr1 (579-662)||(44801592-44801675)
chr1 (557-671)||(3416078-3416192)
chr1 (589-674)||(6574175-6574261)
chr1 (681-735)||(9939843-9939897)
chr1 (557-627)||(14334036-14334106)
chr1 (525-599)||(35961438-35961512)
chr1 (692-729)||(41517327-41517364)
chr1 (539-624)||(48832935-48833020)
[»] chr6 (50 HSPs)
chr6 (516-741)||(34620796-34621039)
chr6 (516-741)||(34748233-34748476)
chr6 (489-741)||(34063242-34063493)
chr6 (604-741)||(7952462-7952599)
chr6 (583-674)||(1485145-1485236)
chr6 (578-671)||(852530-852623)
chr6 (525-673)||(31305788-31305937)
chr6 (518-674)||(882681-882837)
chr6 (516-674)||(30926711-30926869)
chr6 (538-661)||(9505778-9505901)
chr6 (557-671)||(4910906-4911020)
chr6 (525-671)||(2234513-2234658)
chr6 (526-673)||(6654031-6654179)
chr6 (540-648)||(24982314-24982422)
chr6 (577-728)||(6895943-6896094)
chr6 (526-673)||(26280601-26280747)
chr6 (549-671)||(5724595-5724717)
chr6 (577-649)||(17225872-17225944)
chr6 (524-671)||(25388075-25388221)
chr6 (579-634)||(34027412-34027467)
chr6 (547-673)||(8854916-8855041)
chr6 (588-673)||(34898691-34898777)
chr6 (557-674)||(3482041-3482158)
chr6 (552-673)||(8860500-8860621)
chr6 (537-673)||(25195846-25195980)
chr6 (684-741)||(33997108-33997165)
chr6 (525-673)||(765326-765475)
chr6 (530-643)||(434183-434296)
chr6 (587-656)||(10874507-10874576)
chr6 (670-741)||(19601727-19601799)
chr6 (557-672)||(25195339-25195452)
chr6 (489-557)||(28466889-28466957)
chr6 (489-557)||(34736776-34736844)
chr6 (516-646)||(34910970-34911095)
chr6 (564-671)||(16540105-16540212)
chr6 (592-674)||(6050936-6051018)
chr6 (684-732)||(33136601-33136649)
chr6 (525-565)||(35098399-35098439)
chr6 (525-616)||(3289798-3289888)
chr6 (548-599)||(8856377-8856428)
chr6 (684-739)||(10400814-10400869)
chr6 (525-599)||(46229-46303)
chr6 (525-671)||(1499898-1500044)
chr6 (662-736)||(25195460-25195534)
chr6 (622-664)||(26679920-26679962)
chr6 (579-633)||(34026614-34026668)
chr6 (583-624)||(6364614-6364655)
chr6 (664-729)||(29240550-29240615)
chr6 (664-733)||(33141805-33141874)
chr6 (638-671)||(35098228-35098261)
[»] chr8 (50 HSPs)
chr8 (525-669)||(32927892-32928036)
chr8 (525-674)||(26100087-26100236)
chr8 (526-669)||(16972006-16972149)
chr8 (579-728)||(15677810-15677960)
chr8 (525-726)||(32994181-32994384)
chr8 (525-669)||(35494990-35495134)
chr8 (583-671)||(13384653-13384741)
chr8 (525-672)||(4662848-4662991)
chr8 (525-671)||(4950482-4950627)
chr8 (539-676)||(38335816-38335953)
chr8 (548-671)||(32056362-32056484)
chr8 (583-671)||(38537357-38537445)
chr8 (563-674)||(35495255-35495366)
chr8 (513-643)||(32767413-32767543)
chr8 (525-677)||(30098902-30099052)
chr8 (664-741)||(39648243-39648320)
chr8 (517-642)||(42458264-42458388)
chr8 (540-660)||(4554515-4554635)
chr8 (525-610)||(8700895-8700980)
chr8 (557-673)||(37684401-37684517)
chr8 (584-671)||(38868496-38868583)
chr8 (583-669)||(14382396-14382482)
chr8 (523-632)||(18356028-18356135)
chr8 (540-630)||(32809746-32809836)
chr8 (525-590)||(10368044-10368109)
chr8 (688-733)||(32767301-32767346)
chr8 (589-661)||(4336630-4336702)
chr8 (584-715)||(18355850-18355979)
chr8 (539-627)||(32736504-32736592)
chr8 (671-741)||(4554416-4554486)
chr8 (578-628)||(5859057-5859107)
chr8 (583-624)||(2924822-2924863)
chr8 (579-620)||(9695435-9695476)
chr8 (590-671)||(10550829-10550910)
chr8 (557-666)||(32101076-32101185)
chr8 (668-741)||(35495170-35495243)
chr8 (558-613)||(3279026-3279081)
chr8 (580-671)||(13418815-13418906)
chr8 (662-721)||(26668482-26668541)
chr8 (664-735)||(41614760-41614831)
chr8 (525-599)||(9461480-9461553)
chr8 (537-627)||(18123268-18123358)
chr8 (526-632)||(36447690-36447796)
chr8 (577-623)||(37158671-37158717)
chr8 (697-742)||(4554243-4554288)
chr8 (605-673)||(4554330-4554399)
chr8 (687-740)||(8027697-8027750)
chr8 (686-727)||(8252721-8252762)
chr8 (606-639)||(39648163-39648196)
chr8 (586-671)||(44141052-44141137)
[»] scaffold0361 (1 HSPs)
scaffold0361 (525-673)||(14055-14202)
[»] chr5 (48 HSPs)
chr5 (525-667)||(36639939-36640082)
chr5 (489-674)||(34250259-34250441)
chr5 (577-738)||(3043014-3043176)
chr5 (549-727)||(39097188-39097366)
chr5 (528-674)||(35138967-35139121)
chr5 (516-729)||(18637224-18637436)
chr5 (516-653)||(15368489-15368625)
chr5 (579-674)||(42858103-42858198)
chr5 (519-652)||(15873924-15874056)
chr5 (681-741)||(15368153-15368213)
chr5 (578-671)||(9818732-9818826)
chr5 (539-671)||(31906257-31906389)
chr5 (580-671)||(18851078-18851169)
chr5 (579-673)||(33608499-33608594)
chr5 (577-742)||(2937912-2938069)
chr5 (537-671)||(6951258-6951392)
chr5 (563-671)||(38845441-38845550)
chr5 (601-661)||(24306113-24306173)
chr5 (601-661)||(24367143-24367203)
chr5 (607-667)||(32693660-32693720)
chr5 (580-627)||(10898763-10898810)
chr5 (603-671)||(11132804-11132873)
chr5 (651-732)||(25548437-25548518)
chr5 (528-628)||(34443016-34443116)
chr5 (686-741)||(28973768-28973823)
chr5 (568-634)||(8506690-8506756)
chr5 (577-631)||(8591519-8591573)
chr5 (664-742)||(11911907-11911985)
chr5 (686-728)||(13224738-13224780)
chr5 (651-728)||(23647564-23647642)
chr5 (651-728)||(23810931-23811009)
chr5 (543-620)||(4306561-4306638)
chr5 (617-666)||(8121547-8121596)
chr5 (684-741)||(10898632-10898689)
chr5 (577-670)||(22226229-22226322)
chr5 (684-741)||(29922804-29922861)
chr5 (585-673)||(42439618-42439707)
chr5 (588-624)||(7925431-7925467)
chr5 (577-673)||(32980539-32980635)
chr5 (587-706)||(38592175-38592294)
chr5 (527-614)||(117439-117526)
chr5 (684-727)||(16294000-16294043)
chr5 (489-596)||(36927592-36927699)
chr5 (536-627)||(38587128-38587219)
chr5 (697-743)||(10860202-10860248)
chr5 (686-728)||(14670941-14670983)
chr5 (545-673)||(3970361-3970490)
chr5 (525-598)||(14671096-14671168)
[»] chr4 (66 HSPs)
chr4 (539-673)||(29904228-29904362)
chr4 (539-673)||(55927725-55927859)
chr4 (566-673)||(32818352-32818459)
chr4 (516-671)||(37439143-37439295)
chr4 (556-671)||(35065061-35065176)
chr4 (525-650)||(4243406-4243532)
chr4 (525-670)||(22250225-22250370)
chr4 (516-671)||(8604551-8604709)
chr4 (527-659)||(33843987-33844120)
chr4 (577-671)||(9064229-9064323)
chr4 (577-669)||(10185193-10185286)
chr4 (519-667)||(20712749-20712897)
chr4 (577-667)||(16551959-16552047)
chr4 (558-673)||(21691186-21691301)
chr4 (602-670)||(1048716-1048784)
chr4 (539-671)||(47144213-47144344)
chr4 (564-706)||(1616354-1616495)
chr4 (583-625)||(32100336-32100378)
chr4 (516-634)||(41751204-41751322)
chr4 (687-741)||(43075973-43076027)
chr4 (684-741)||(1099746-1099803)
chr4 (603-671)||(2206362-2206431)
chr4 (539-624)||(22683909-22683994)
chr4 (613-658)||(43807344-43807389)
chr4 (579-671)||(39386631-39386723)
chr4 (561-673)||(53713538-53713650)
chr4 (525-592)||(23523467-23523534)
chr4 (603-674)||(30357507-30357578)
chr4 (596-659)||(32680780-32680842)
chr4 (538-649)||(47314955-47315066)
chr4 (684-731)||(49138953-49139000)
chr4 (607-671)||(2206515-2206580)
chr4 (583-673)||(2635159-2635251)
chr4 (577-673)||(9134606-9134700)
chr4 (527-584)||(29114804-29114861)
chr4 (614-706)||(29728947-29729040)
chr4 (638-675)||(29779108-29779145)
chr4 (514-571)||(38716686-38716743)
chr4 (684-733)||(45329764-45329813)
chr4 (687-728)||(47179568-47179609)
chr4 (529-621)||(36639843-36639934)
chr4 (613-673)||(55186991-55187051)
chr4 (578-673)||(2326805-2326900)
chr4 (628-671)||(4088916-4088959)
chr4 (614-661)||(8330124-8330171)
chr4 (692-731)||(35995148-35995187)
chr4 (610-657)||(43807496-43807543)
chr4 (565-636)||(45694647-45694718)
chr4 (582-733)||(47314999-47315163)
chr4 (516-571)||(48045684-48045739)
chr4 (684-731)||(48045819-48045866)
chr4 (689-728)||(55085125-55085164)
chr4 (525-599)||(2206596-2206670)
chr4 (664-730)||(2635084-2635150)
chr4 (664-738)||(20712563-20712637)
chr4 (564-673)||(31012718-31012828)
chr4 (618-675)||(32817486-32817544)
chr4 (686-728)||(50358134-50358176)
chr4 (538-599)||(1023872-1023933)
chr4 (662-738)||(8330027-8330104)
chr4 (697-730)||(17898376-17898409)
chr4 (585-673)||(18597035-18597124)
chr4 (684-729)||(29114697-29114742)
chr4 (687-736)||(29904147-29904196)
chr4 (577-646)||(45011897-45011966)
chr4 (586-671)||(50061630-50061715)
[»] chr2 (55 HSPs)
chr2 (517-671)||(1976797-1976952)
chr2 (517-671)||(4894090-4894244)
chr2 (577-669)||(42982544-42982636)
chr2 (588-741)||(16013714-16013886)
chr2 (585-674)||(37420196-37420287)
chr2 (556-671)||(42740975-42741089)
chr2 (557-726)||(43501068-43501235)
chr2 (528-673)||(44439249-44439395)
chr2 (516-673)||(7629866-7630021)
chr2 (557-674)||(33019129-33019246)
chr2 (664-741)||(40582659-40582735)
chr2 (557-676)||(13912780-13912899)
chr2 (636-741)||(43717252-43717357)
chr2 (585-740)||(9943334-9943490)
chr2 (538-673)||(16518775-16518909)
chr2 (527-609)||(15220804-15220886)
chr2 (681-741)||(7629772-7629832)
chr2 (541-622)||(680247-680328)
chr2 (605-674)||(10618962-10619031)
chr2 (557-674)||(22535993-22536110)
chr2 (638-730)||(21234579-21234671)
chr2 (536-634)||(33502272-33502367)
chr2 (516-612)||(40401575-40401671)
chr2 (584-670)||(7630191-7630278)
chr2 (591-662)||(41494078-41494149)
chr2 (580-666)||(4779111-4779197)
chr2 (489-673)||(3476334-3476519)
chr2 (525-634)||(11759800-11759909)
chr2 (516-671)||(30503207-30503360)
chr2 (581-661)||(33961978-33962058)
chr2 (686-741)||(16519356-16519411)
chr2 (631-669)||(488565-488603)
chr2 (687-741)||(1976986-1977040)
chr2 (587-669)||(3654631-3654713)
chr2 (547-649)||(37287795-37287897)
chr2 (577-627)||(44147944-44147994)
chr2 (607-668)||(2002718-2002779)
chr2 (525-666)||(5532973-5533113)
chr2 (686-727)||(37420317-37420358)
chr2 (684-741)||(44439160-44439217)
chr2 (601-653)||(7139692-7139743)
chr2 (615-671)||(21659717-21659773)
chr2 (584-623)||(7632815-7632854)
chr2 (684-727)||(15928552-15928595)
chr2 (579-634)||(37541332-37541387)
chr2 (689-732)||(42774958-42775001)
chr2 (664-731)||(44670992-44671059)
chr2 (703-741)||(680420-680458)
chr2 (622-664)||(1305862-1305904)
chr2 (638-728)||(7632642-7632732)
chr2 (602-724)||(16488273-16488395)
chr2 (687-741)||(37649595-37649649)
chr2 (688-741)||(4778463-4778516)
chr2 (593-674)||(12037056-12037137)
chr2 (545-626)||(28206720-28206801)
[»] scaffold0314 (1 HSPs)
scaffold0314 (543-671)||(17131-17259)
[»] scaffold0168 (1 HSPs)
scaffold0168 (684-730)||(31747-31793)
[»] scaffold0360 (1 HSPs)
scaffold0360 (660-726)||(13285-13351)


Alignment Details
Target: chr7 (Bit Score: 385; Significance: 0; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 1 - 422
Target Start/End: Original strand, 38123085 - 38123506
Alignment:
Q  1 atataatgatgaattctaaacnnnnnnncctaactaaagaatatgatggcactttatataatccctaaattacccaagaacatagatatcagcaggtgga 100  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38123085 atataatgatgaattctaaactttttttcctaactaaagaatatgatggcactttatataatccctaaattacccaagaacatagatatcagcatgtgga 38123184  T
Q  101 gaaatgtgaagccaatcttccagacttaaataacttggaggtgatttcccagccacgttccaagtggcaacgaatattctgtattcaaaaggaaaaataa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38123185 gaaatgtgaagccaatcttccagacttaaataacttggaggtgatttcccggccacgttccaagtggcaacgaatattctgtattcaaaaggaaaaataa 38123284  T
Q  201 ataaatcaagagaataaaattcttaaatttcattgtaatggcaacaaacatgataattaagtacatgaagcatacctataattacatacatctgtaacct 300  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38123285 ataaatcaagagaataaaattcttaaatttcactgcaatggcaacaaacatgataattaagtacatgaagcatacctataattacatacatctgtaacct 38123384  T
Q  301 gagcttcaccaaggtaactcttacctctttgcattctatctatgtacgttctgcttgatctctctatgtattcagaattaattatttgatattagtagga 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38123385 gagcttcaccaaggtaactcttacctctttgcattctatctatgtacgttctgcttgatctctctatgtattcagaattaattatttgatattagtagga 38123484  T
Q  401 gaaggagaccaaacaaataggg 422  Q
    ||||||||||||||||||||||    
T  38123485 gaaggagaccaaacaaataggg 38123506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 489 - 741
Target Start/End: Original strand, 38123571 - 38123823
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaa 588  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38123571 tgtttggttctgcggtgagaaatataaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaa 38123670  T
Q  589 aagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaacca 688  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38123671 aagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaacca 38123770  T
Q  689 aacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38123771 aacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 38123823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 516 - 676
Target Start/End: Complemental strand, 45557518 - 45557358
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||| | |||||||| ||||||||| ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| | | ||||||| |||    
T  45557518 attttgaatgaattgattctgactaaaagtgagttgaaggtaaagtgatttgtgtttggatacattcatgtaaaagtgagttgagctacaaatttgtgtg 45557419  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctact 676  Q
    ||||||||||| ||||||||| ||||||||  |||||||||| || | |||||||||||||    
T  45557418 taaaaatcaatcctagaattaaaagctacagattctagcttctagcaaaatcaattctact 45557358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 489 - 673
Target Start/End: Original strand, 40561663 - 40561847
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaa 588  Q
    ||||||||||| |  ||| ||| ||| ||||||||| |||||||| |    |||||||||||||| ||||||| |||| |||| ||| ||||||||||||    
T  40561663 tgtttggttctaccatgacaaaagttgattttgagtgaattgattctagtaaaaattgagttgaaagtaaagtgatttatgtttggatacattcatgtaa 40561762  T
Q  589 aagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    ||||||||||| ||||| ||||||||||| |||| ||||||||| ||| || |||||||||||| ||||||||||||||||||||    
T  40561763 aagtgagttgaacaatatatttgagtgtataaattaattctagacttacaaactacaatttctaacttcaagtagaatcaattct 40561847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 516 - 673
Target Start/End: Complemental strand, 27572015 - 27571858
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    |||||| || ||||||||||| |||||| |||||| |||||||| | |||| || | ||| ||||| ||||||| |||||||||  |||||| |||||||    
T  27572015 attttgggtgaattgattatggctaaaagtgagttaaaggtaaaatgatttatggttggatacatttatgtaaatgtgagttgaataataaacttgagtg 27571916  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    | ||||||||||||||||| | ||||| ||||||||| ||||||||||||||||||||    
T  27571915 ttaaaatcaattctagaatcaaaagctccaatttctaacttcaagtagaatcaattct 27571858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 729
Target Start/End: Complemental strand, 17111998 - 17111797
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||| |||||||| ||||||||||||| ||| ||||||||| ||||||||| |||  ||||||||||||| ||||| ||   ||||||||| |||    
T  17111998 attttgagtgaattgattttgactaaaattgaattgtaggtaaagtgatttgtgtttggatgcattcatgtaaaaatgagtagaattataaatttgtgtg 17111899  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctc 715  Q
    ||| ||||||            ||||||||| |  ||||||||||||||||||||||||||  | || |||||||||||| | ||||||||| |||||||    
T  17111898 taagaatcaa------------aagctacaaatcatagcttcaagtagaatcaattctactcgaaagcaaccaaacatgtcagaatcaattcgacatctc 17111811  T
Q  716 tagaatcaattttg 729  Q
    |||||| |||||||    
T  17111810 tagaattaattttg 17111797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 525 - 673
Target Start/End: Complemental strand, 40491722 - 40491574
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| ||||||||| ||||||||||||||||| |||| | || ||| ||||||||||||||||||||| | |  |||||||| |||||||| |||    
T  40491722 aaattgattttgactaaaagtgagttgaaggtaaagtgatttatttttggatacattcatgtaaaagtgagttaaactttaaatttgtgtgtaaaagtca 40491623  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||| | |||||||||    || ||||||||||| ||||||||    
T  40491622 attctagaatcaaaagctacaaaacttaacttcaagtagagtcaattct 40491574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 580 - 673
Target Start/End: Original strand, 41386811 - 41386904
Alignment:
Q  580 ttcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||| |||||||||||||   ||||||||| ||||||| |||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  41386811 ttcatgcaaaagtgagttgaattataaatttgtgtgtaaatatcaattctagaattaaaagctacaaatcctagcttcaagtagaatcaattct 41386904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 601 - 671
Target Start/End: Original strand, 30182313 - 30182383
Alignment:
Q  601 caataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||    
T  30182313 caataaatttgagtgtaaaaattaattctagaatcaaaagctacaatttttagcttcaagtagaatcaatt 30182383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 580 - 673
Target Start/End: Original strand, 597942 - 598034
Alignment:
Q  580 ttcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||||||||||||| |||||||||| |||| || |||||||| ||||||   |||||||||||| |||||||||||||||||||||||    
T  597942 ttcatgtaaaagtgagttgaacaataaattttagtgcaagaatcaattatagaatcgaaagctacaattt-tagcttcaagtagaatcaattct 598034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 549 - 673
Target Start/End: Complemental strand, 41788436 - 41788312
Alignment:
Q  549 ttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatt 648  Q
    ||||||||||||| |||| |||| | | ||||| || |||||||||||||| ||  |||||||||||| |||||||||| |||| | | ||| | |||||    
T  41788436 ttgaaggtaaagtgatttatgtttgtatacattaatataaaagtgagttgaacagcaaatttgagtgttaaaatcaattatagactcaaaagtttcaatt 41788337  T
Q  649 tctagcttcaagtagaatcaattct 673  Q
    |||||||| ||||||||||||||||    
T  41788336 tctagctttaagtagaatcaattct 41788312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 540 - 651
Target Start/End: Original strand, 22310415 - 22310526
Alignment:
Q  540 aaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaa 639  Q
    ||||||||||||||| ||||   |||| |||| ||| ||||||  |||||||||| ||||  ||||||||| ||||||||||| ||||||||||||||||    
T  22310415 aaaattgagttgaagataaaaagatttatgtttggatacattctcgtaaaagtgaattgaaaaataaatttaagtgtaaaaattaattctagaattagaa 22310514  T
Q  640 gctacaatttct 651  Q
    |||| |||||||    
T  22310515 gctataatttct 22310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 674
Target Start/End: Original strand, 9183869 - 9184005
Alignment:
Q  538 ctaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattag 637  Q
    |||||||||||||||||||||| | |||| ||||   | |||||| |||||  |||| |||| |||||||||||| | ||||| |||||||||| ||||     
T  9183869 ctaaaattgagttgaaggtaaaattatttatgtttatatacattcgtgtaagtgtgacttgaacaataaatttgaatataaaactcaattctagtattaa 9183968  T
Q  638 aagctacaatttctagcttcaagtagaatcaattcta 674  Q
    || ||||||||| || |||||| || |||||| ||||    
T  9183969 aaactacaatttttaacttcaaataaaatcaactcta 9184005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 727
Target Start/End: Complemental strand, 12306866 - 12306658
Alignment:
Q  526 aattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaa--taaatttgagtgtaaaaatc 623  Q
    |||||||| || |||||| |||||||||| |||||| |||| |||| ||  | |||||||||||||||||||||  |   | ||||||||||||||||||    
T  12306866 aattgattctggctaaaagtgagttgaagataaagtgatttatgtttggctagattcatgtaaaagtgagttgaatatagtgaatttgagtgtaaaaatc 12306767  T
Q  624 aattctagaattagaagctacaattt----ctagcttcaagt-agaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctag 718  Q
    ||||||| ||| | ||||| ||| ||    |  | || |||  | |||||||||||||| | || |||||||||||| ||||||||||||||| ||||||    
T  12306766 aattctaaaatcaaaagcttcaagttaattcatgattgaaggcaaaatcaattctacttgagagcaaccaaacatgtcaaaatcaattctacacctctag 12306667  T
Q  719 aatcaattt 727  Q
     ||| ||||    
T  12306666 gatccattt 12306658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 535 - 634
Target Start/End: Complemental strand, 25156334 - 25156235
Alignment:
Q  535 tgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaat 634  Q
    ||||||||| |||||||||| |||| | ||||||||| | | |||||||| ||||||||||||||   || |||||  ||||||||||||||||||||||    
T  25156334 tgactaaaaatgagttgaagataaaatgatttgtgtttgaatacattcatataaaagtgagttgatttattaatttatgtgtaaaaatcaattctagaat 25156235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 583 - 673
Target Start/End: Complemental strand, 45005106 - 45005016
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||||||||||  ||||||||||||||  || |||||||||| ||| | |  || |||||| |||||||||||||||||||||||    
T  45005106 atgtaaaagtgagttgaataataaatttgagtgctaagatcaattctataatcaaagcctccaatttttagcttcaagtagaatcaattct 45005016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 740
Target Start/End: Complemental strand, 15050279 - 15050203
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaa 740  Q
    |||||||||||| | | || ||||||||| || |||||||||||| ||  |||||||||||||||||||||||||||    
T  15050279 aatcaattctacatgagagtaaccaaacaggtcaaaatcaattcttcacttctagaatcaattttggctcctccaaa 15050203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 539 - 630
Target Start/End: Original strand, 40795944 - 40796035
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattcta 630  Q
    ||||| ||| |||||||||||||  ||| || | ||| |||||||||||||||||| ||||  | ||||||||||||| |||||||||||||    
T  40795944 taaaaatgaattgaaggtaaagtggtttatgattggatacattcatgtaaaagtgatttgaatagtaaatttgagtgttaaaatcaattcta 40796035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 684 - 731
Target Start/End: Complemental strand, 45004952 - 45004905
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggc 731  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  45004952 aaccaaacatgtcaaaatcaattctacacctctagaatcaattttggc 45004905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 666
Target Start/End: Complemental strand, 37277661 - 37277597
Alignment:
Q  602 aataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaat 666  Q
    |||| |||||||| ||||||||||||||| ||||| ||| |||||||| |||||| |||||||||    
T  37277661 aatatatttgagtataaaaatcaattctaaaattaaaagttacaatttatagctttaagtagaat 37277597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 539 - 622
Target Start/End: Original strand, 44570695 - 44570778
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaat 622  Q
    ||||||||||||||| ||||||| |||| |||| |   | |||||| ||||||||||||||  ||||||||||| |||||||||    
T  44570695 taaaattgagttgaatgtaaagtgatttatgtttgattatattcatataaaagtgagttgataaataaatttgaatgtaaaaat 44570778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 614
Target Start/End: Original strand, 33853416 - 33853514
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagt 614  Q
    ||||| ||| |||||||| || |||| | |||||||||| |||||| |||| |||| ||| |||||||||||||||  || ||  ||||||||||||||    
T  33853416 atttttagtgaattgattctggctaagagtgagttgaagctaaagtgatttatgtttggatacattcatgtaaaagcaagctggacaataaatttgagt 33853514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 540 - 590
Target Start/End: Complemental strand, 41010085 - 41010035
Alignment:
Q  540 aaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaa 590  Q
    |||||||| |||||||||||||||||| |||| ||| ||||||||||||||    
T  41010085 aaaattgaattgaaggtaaagtaatttatgtttggatacattcatgtaaaa 41010035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 625
Target Start/End: Original strand, 44365567 - 44365642
Alignment:
Q  549 ttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaa 625  Q
    ||||||||||||| |||| || | ||| ||||| ||||||||||||| ||| ||||| ||||||||||| |||||||    
T  44365567 ttgaaggtaaagtgatttatgataggatacattaatgtaaaagtgag-tgaacaatacatttgagtgtataaatcaa 44365642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 671
Target Start/End: Original strand, 5489874 - 5489933
Alignment:
Q  612 agtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||| |||||||||| || ||| | ||||| ||||||||||| ||||||||||||||||    
T  5489874 agtgttaaaatcaattatataatcaaaagctccaatttctagcatcaagtagaatcaatt 5489933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 729
Target Start/End: Complemental strand, 6996520 - 6996457
Alignment:
Q  666 tcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttg 729  Q
    |||||| ||||| | || |||||||||||| | |||||||| |||||| |||||||||||||||    
T  6996520 tcaattatacttgagagtaaccaaacatgtcagaatcaattttacatccctagaatcaattttg 6996457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 711
Target Start/End: Complemental strand, 38453367 - 38453308
Alignment:
Q  652 agcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctaca 711  Q
    |||||||||||||||||||||||||||| |  | ||||| ||  ||||||||||||||||    
T  38453367 agcttcaagtagaatcaattctactttaaatcatccaaatatcataaaatcaattctaca 38453308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 636
Target Start/End: Original strand, 42816461 - 42816520
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaatta 636  Q
    ||||||||||| |||||| ||||   ||||||||| |||| |||||||||||||||||||    
T  42816461 acattcatgtagaagtgaattgaattataaatttgtgtgtgaaaatcaattctagaatta 42816520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 606
Target Start/End: Original strand, 21435938 - 21436020
Alignment:
Q  524 taaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataa 606  Q
    |||||||||||||||||| ||||||||||| | ||||| |||| |||| |||  | |||||| |||||||  |||| ||||||    
T  21435938 taaattgattatgactaacattgagttgaatgcaaagtgatttatgtttggatgccttcatggaaaagtggattgaacaataa 21436020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 620 - 670
Target Start/End: Original strand, 28725088 - 28725138
Alignment:
Q  620 aatcaattctagaattagaagctacaatttctagcttcaagtagaatcaat 670  Q
    |||||||| |||||| | ||||||||| ||||||||||||||| |||||||    
T  28725088 aatcaattatagaatcaaaagctacaaattctagcttcaagtataatcaat 28725138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 614
Target Start/End: Complemental strand, 42668260 - 42668170
Alignment:
Q  524 taaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagt 614  Q
    |||||||||| || |||||| ||  ||| |||||||||||||| |||| ||| |||| |||  |||||||| |||| |||||||| |||||    
T  42668260 taaattgattttggctaaaagtgtcttggaggtaaagtaatttatgtttggatacatacattgaaaagtgaattgaacaataaatctgagt 42668170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 624
Target Start/End: Complemental strand, 18349857 - 18349820
Alignment:
Q  587 aaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  18349857 aaaattgagttgaacaataaatttgagtgtaaaaatca 18349820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 3e-59; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 526 - 741
Target Start/End: Complemental strand, 3776665 - 3776449
Alignment:
Q  526 aattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaa 625  Q
    |||||||| || |||||||||||||||| ||||||| |||| || | ||| ||||| ||||||||||||||| | ||| |||||||||||||||||| ||    
T  3776665 aattgattctggctaaaattgagttgaatgtaaagtgatttatgcttggatacattgatgtaaaagtgagttcagcaacaaatttgagtgtaaaaattaa 3776566  T
Q  626 ttctagaattagaagctacaatttctagcttcaagtagaatcaattctacttt-ataggaaccaaacatgttaaaatcaattctacatctctagaatcaa 724  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||| |||||| | ||||||||||||||| ||||||||||||||| ||||| || |||    
T  3776565 ttctagaatcagaagctacaatttctagattcaagtagaatctattatactttaagaggaaccaaacatgtcaaaatcaattctacacctctataaccaa 3776466  T
Q  725 ttttggctcctccaaaa 741  Q
    ||||| |||||||||||    
T  3776465 ttttgtctcctccaaaa 3776449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 525 - 661
Target Start/End: Original strand, 35253408 - 35253544
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| || ||||||||||||| |||||||||| |||| | || ||| ||| |||||||||||||||||||   ||||||||||||||||||||||    
T  35253408 aaattgattttggctaaaattgagtttaaggtaaagtgatttatatttggaaacaatcatgtaaaagtgagttgaatgataaatttgagtgtaaaaatca 35253507  T
Q  625 attctagaattagaagctacaatttctagcttcaagt 661  Q
    |||||||||  ||||||||| ||||| ||||||||||    
T  35253508 attctagaaccagaagctactatttccagcttcaagt 35253544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 525 - 673
Target Start/End: Original strand, 37334975 - 37335123
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||||||||  |||||||||||||||||||||||||| |||| |||  | | |||||||| ||||| |||||||| |||| ||||  |||||||||||||    
T  37334975 aaattgattccgactaaaattgagttgaaggtaaagtgatttatgtctgaatacattcatataaaaatgagttgaacaatgaattcaagtgtaaaaatca 37335074  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||| | ||||||| ||||||| |||| |||| ||||||||||    
T  37335075 attctagaatcaaaagctacgatttctaacttctagtaaaatcaattct 37335123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 489 - 661
Target Start/End: Complemental strand, 51285750 - 51285578
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaa 588  Q
    ||||||||| ||||||||||||  || ||||||||| |||| |||||| |||||| ||||||||| |||||||||||  || | ||| ||||||||||||    
T  51285750 tgtttggttttgcggtgagaaaaattgattttgagtgaatttattatggctaaaagtgagttgaatgtaaagtaattcatgcttggatacattcatgtaa 51285651  T
Q  589 aagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt 661  Q
    ||| | ||| | ||| ||||||||||| |||||||||||||||||| | |||||   |||| |||||||||||    
T  51285650 aagcgggttaaacaacaaatttgagtgcaaaaatcaattctagaatcaaaagctgtgatttttagcttcaagt 51285578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 516 - 674
Target Start/End: Complemental strand, 5407053 - 5406901
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||| |||||||| |  |||||||||||||||||||||||| ||    ||| ||| |||||||||||||||||| ||||  | ||||||||  |     
T  5407053 attttgagtgaattgattctagctaaaattgagttgaaggtaaagttat----gtttggatacattcatgtaaaagtgatttgaagagtaaatttg--tt 5406960  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    ||||||||||||||| ||| ||||||||| |||||||||||| ||||||||| ||||||    
T  5406959 taaaaatcaattctataatcagaagctaccatttctagcttcgagtagaatccattcta 5406901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 525 - 668
Target Start/End: Original strand, 35264352 - 35264495
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| | || |||| ||||||||| ||||||| | || |||| ||  |||||||||||||| ||| |||| |||||||||| ||||| |||||||    
T  35264352 aaattgattgtaaccaaaagtgagttgaaagtaaagtgagttatgtttgggtacattcatgtaaaaatgacttgaacaataaatttaagtgttaaaatca 35264451  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatca 668  Q
    |||||||||| | |||||  ||||||||| ||||||||||||||    
T  35264452 attctagaatcaaaagctctaatttctagtttcaagtagaatca 35264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 580 - 666
Target Start/End: Original strand, 27266790 - 27266876
Alignment:
Q  580 ttcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaat 666  Q
    ||||||||||||| |||||| |||||||||||||||||||||| |||||| |||| |  ||||||||||||||||||||||||||||    
T  27266790 ttcatgtaaaagttagttgaacaataaatttgagtgtaaaaattaattcttgaatcattagctacaatttctagcttcaagtagaat 27266876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 519 - 634
Target Start/End: Original strand, 46853469 - 46853584
Alignment:
Q  519 ttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaa 618  Q
    |||||| |||||||| || ||| || | ||||||||||||||| |||| |||  ||| | ||| ||||||||||||||||| |||||||||||||||| |    
T  46853469 ttgagtgaattgattttggctacaagtaagttgaaggtaaagtgatttatgtcaggatatatttatgtaaaagtgagttgaacaataaatttgagtgtta 46853568  T
Q  619 aaatcaattctagaat 634  Q
    ||||||||||||||||    
T  46853569 aaatcaattctagaat 46853584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 577 - 673
Target Start/End: Original strand, 7717321 - 7717410
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    ||||||||||| ||||||||||| |||||||||||||||||||       || ||||| ||||||||||||||||||||||||||||||||||||||    
T  7717321 acattcatgtagaagtgagttgaacaataaatttgagtgtaaa-------tcgagaatcagaagctacaatttctagcttcaagtagaatcaattct 7717410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 525 - 646
Target Start/End: Original strand, 31708180 - 31708301
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||||||||| |||||||| |||||||  | ||||||  |||||||| ||| |||||||||||||||||||||||   ||||||||| |||| | |||||    
T  31708180 aaattgattaggactaaaagtgagttgctgataaagtggtttgtgtttggatacattcatgtaaaagtgagttgaattataaatttgtgtgttagaatca 31708279  T
Q  625 attctagaattagaagctacaa 646  Q
    |||||||||| | |||||||||    
T  31708280 attctagaatcaaaagctacaa 31708301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 586 - 673
Target Start/End: Complemental strand, 35058445 - 35058357
Alignment:
Q  586 taaaagtgagttgaccaataa-atttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||| | |||||  ||||||||||| |||||||||||||||||    
T  35058445 taaaagtgagttgaacaataatatttgagtgttaaaatcaattctagaatcaaaagctcgaatttctagctccaagtagaatcaattct 35058357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 577 - 727
Target Start/End: Original strand, 38332547 - 38332698
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattctac 675  Q
    ||||||||| | || |||||||| ||||||||||||||||||| | ||||| |||||| ||||||| |||||| ||||||| || || |||||||| | |    
T  38332547 acattcatggataaatgagttgaacaataaatttgagtgtaaataccaattttagaatcagaagctccaatttgtagcttctagttataatcaattttgc 38332646  T
Q  676 tttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattt 727  Q
    |  | ||  ||||||||||| |||||||||| ||||  ||||||||||||||    
T  38332647 tcaagagccaccaaacatgtcaaaatcaattatacacatctagaatcaattt 38332698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 525 - 671
Target Start/End: Original strand, 584734 - 584879
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| |  |||||||| |||||||| ||||   |||| |||| ||| ||||| ||||||||||||| | | |||| ||||||| || ||||||||    
T  584734 aaattgattttagctaaaattaagttgaagctaaatggatttctgtttggatacatttatgtaaaagtgagctaaacaattaatttgactgcaaaaatca 584833  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||| ||||||  |||||||||||||||||| | |||||||||||||    
T  584834 attcaagaatttaaagctacaatttctagctgc-agtagaatcaatt 584879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 557 - 673
Target Start/End: Original strand, 25359547 - 25359663
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| ||||||||| ||| |||||||| || |||||| || | |||||||| || |||| |||||||||| |||||| | || |||||| ||||| |||    
T  25359547 aaagtgatttgtgtttggatacattcatatagaagtgattttaacaataaatatgtgtgtgaaaatcaattatagaataaaaaactacaaattctaactt 25359646  T
Q  657 caagtagaatcaattct 673  Q
    |||||||||||||||||    
T  25359647 caagtagaatcaattct 25359663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 669
Target Start/End: Complemental strand, 36302274 - 36302183
Alignment:
Q  578 cattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaa 669  Q
    |||||||||||||||||||||| |||||||||| ||||  ||||||||||||| ||| | || || |||| ||||||||||| |||||||||    
T  36302274 cattcatgtaaaagtgagttgaacaataaatttaagtgctaaaatcaattctaaaatcaaaatctccaatctctagcttcaaatagaatcaa 36302183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 583 - 671
Target Start/End: Original strand, 30300997 - 30301086
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaatt-agaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||||||| | || || |||||||||||||||| |||| ||||||    
T  30300997 atgtaaaagtgggttgaacaataaatttgagtgttaaaaccaattctagaattaaaaaactccaatttctagcttcaaatagagtcaatt 30301086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 568 - 673
Target Start/End: Original strand, 40147834 - 40147939
Alignment:
Q  568 tgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatc 667  Q
    |||| ||| ||||| |||||||||||||||||   |||||||  |||||  |||||||||||||||| | ||||| ||| ||||||||| ||||||||||    
T  40147834 tgtttggatacattaatgtaaaagtgagttgaatgataaattcaagtgttgaaatcaattctagaatcaaaagctccaaattctagcttgaagtagaatc 40147933  T
Q  668 aattct 673  Q
    ||||||    
T  40147934 aattct 40147939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 583 - 671
Target Start/End: Complemental strand, 37703185 - 37703097
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||| |||| |||||||||||||||||||||| |||| || ||| ||||| ||||||||  | ||||||||| ||||||||    
T  37703185 atgtaaaagtgaattgaacaataaatttgagtgtaaaaattaattttaaaataagaagttacaattttaaacttcaagtataatcaatt 37703097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 662 - 741
Target Start/End: Original strand, 3845208 - 3845287
Alignment:
Q  662 agaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||||||| | |  || ||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||    
T  3845208 agaatcaattctacttgagatcaaacaaacatgtcaaaatcaattctacacctctagaatcaattttggttactccaaaa 3845287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 666
Target Start/End: Complemental strand, 31013162 - 31013021
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||||||||  |||||||| ||||||| || |||||| ||||||||| |||  |||||||||| |||||||||||    |||||||| |||| | |||||    
T  31013162 aaattgattccgactaaaagtgagttgtagataaagtgatttgtgtttggatgcattcatgtacaagtgagttgaattctaaatttgtgtgttagaatca 31013063  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaat 666  Q
    |||||||| | | | ||||||| |  ||| ||||||||||||    
T  31013062 attctagattcaaaggctacaaatagtaggttcaagtagaat 31013021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 741
Target Start/End: Original strand, 52925729 - 52925786
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||    
T  52925729 aaccaaacatgtcaaaatcaattatacacctctagaatcaattttgactcctccaaaa 52925786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 646
Target Start/End: Original strand, 41596107 - 41596211
Alignment:
Q  542 aattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagc 641  Q
    |||||||||||| ||||||| |||| |||| ||| ||||||||| ||||||||||  | | ||||| ||| |||||||||||||||||  ||| | ||||    
T  41596107 aattgagttgaatgtaaagtgatttctgtttggatacattcatggaaaagtgagtcaaactataaacttgtgtgtaaaaatcaattctttaatcaaaagc 41596206  T
Q  642 tacaa 646  Q
    |||||    
T  41596207 tacaa 41596211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 602 - 728
Target Start/End: Original strand, 21513364 - 21513491
Alignment:
Q  602 aataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt-agaatcaattctactttataggaaccaaacatgttaaaa 700  Q
    |||||||||||||||||||||||  | | || | | ||||||||| | ||||||  |||| | |||||||||||||| | |  | |||| ||||||||||    
T  21513364 aataaatttgagtgtaaaaatcacgtttggagtcaaaagctacaaatcctagctctaagttaaaatcaattctacttgagaacatccaagcatgttaaaa 21513463  T
Q  701 tcaattctacatctctagaatcaatttt 728  Q
    |||||||| || ||||||||||||||||    
T  21513464 tcaattctccacctctagaatcaatttt 21513491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 525 - 675
Target Start/End: Complemental strand, 32112138 - 32111988
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||||||  ||||| ||||||||| | |||||||||| |||| |||   ||| |||||||||||  || | |||| ||||| ||| ||||| |||    
T  32112138 aaattgattatggataaaaatgagttgaatgaaaagtaatttatgtttggatttatttatgtaaaagtggatttaacaatgaatttaagtctaaaa-tca 32112040  T
Q  625 attctagaatt-agaagctacaatttctagcttcaagtagaatcaattctac 675  Q
    |||||| ||   | ||||||||| || |||||||||||||||||||||||||    
T  32112039 attctaaaagccaaaagctacaaattgtagcttcaagtagaatcaattctac 32111988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 568 - 669
Target Start/End: Original strand, 5046064 - 5046165
Alignment:
Q  568 tgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatc 667  Q
    |||| ||| ||||||||||| |||| | |||| ||||||| |||| |||||||||||||| |  |||  ||  |||||||||||||||||||||| ||||    
T  5046064 tgtttggatacattcatgtacaagtaacttgaacaataaacttgactgtaaaaatcaattatgaaatatgactctacaatttctagcttcaagtataatc 5046163  T
Q  668 aa 669  Q
    ||    
T  5046164 aa 5046165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 673 - 741
Target Start/End: Complemental strand, 5406884 - 5406816
Alignment:
Q  673 tactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||| ||||||||||||    ||||||||||||| | ||||||||||| |||||||||||||||||    
T  5406884 tactttagaggaaccaaacacagaaaaatcaattctagacctctagaatcatttttggctcctccaaaa 5406816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 669
Target Start/End: Original strand, 44958623 - 44958691
Alignment:
Q  601 caataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaa 669  Q
    ||||||| |||||||| ||||||| ||||||||| | ||||| ||||||||||| || |||||||||||    
T  44958623 caataaagttgagtgttaaaatcatttctagaatcaaaagctccaatttctagcatcgagtagaatcaa 44958691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 671
Target Start/End: Complemental strand, 4526224 - 4526130
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||| ||||||||||| ||||| | ||||||||| ||||||||||||||| || ||| | ||| ||||| || ||| | ||| |||||||||||    
T  4526224 acatttatgtaaaagtgtgttgaactataaatttgtgtgtaaaaatcaattttaaaatcaaaagttacaaattataggtacaaatagaatcaatt 4526130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 571
Target Start/End: Original strand, 46943261 - 46943307
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgtt 571  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  46943261 aaattgattctgactaaaattgagttgtaggtatagtaatttgtgtt 46943307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 51667277 - 51667195
Alignment:
Q  527 attgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatt 609  Q
    ||||||||||| |||||||||| || | ||||||| |||| |||| ||  | ||||||||||||||| ||||| |||||||||    
T  51667277 attgattatgaataaaattgagctggatgtaaagtgatttatgtttgggtagattcatgtaaaagtgcgttgaacaataaatt 51667195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 741
Target Start/End: Original strand, 1441479 - 1441556
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||||  | || |||||||||||| ||| ||||||||||| ||||||||  |||||||| | ||||||||    
T  1441479 aatcaattctactcaaaagaaaccaaacatgtcaaactcaattctacacctctagaaataattttggttactccaaaa 1441556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 733
Target Start/End: Original strand, 7717471 - 7717540
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctc 733  Q
    ||||||||||||| |  ||||||||||||||| |||||||| |||| | ||||| |||||||||| ||||    
T  7717471 aatcaattctactctggaggaaccaaacatgtcaaaatcaactctaaacctctacaatcaattttagctc 7717540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 741
Target Start/End: Original strand, 21007763 - 21007816
Alignment:
Q  688 aaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||| |||||||||| || |||| || |||||||||||||||||||||||    
T  21007763 aaacatgtcaaaatcaattatatatctttaaaatcaattttggctcctccaaaa 21007816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 742
Target Start/End: Original strand, 25129613 - 25129698
Alignment:
Q  658 aagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctac-atctctagaatcaattttggctcctccaaaat 742  Q
    |||||||||||||||  ||||| |  | ||||||||| ||||||||||||||| | ||||||||||||||||| | |||| |||||    
T  25129613 aagtagaatcaattcacctttaaatcatccaaacatgataaaatcaattctacaacctctagaatcaattttgacccctcgaaaat 25129698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 671
Target Start/End: Complemental strand, 35058118 - 35058065
Alignment:
Q  618 aaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||||||||| ||||| ||||||||| | ||||||||| ||||||||||||    
T  35058118 aaaatcaattctataattaaaagctacaaatcctagcttcatgtagaatcaatt 35058065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 679
Target Start/End: Complemental strand, 40339257 - 40339216
Alignment:
Q  638 aagctacaatttctagcttcaagtagaatcaattctacttta 679  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  40339257 aagctacaaattgtagcttcaagtagaatcaattctacttta 40339216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 675
Target Start/End: Original strand, 41115416 - 41115453
Alignment:
Q  638 aagctacaatttctagcttcaagtagaatcaattctac 675  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  41115416 aagctacaaattctagcttcaagtagaatcaattctac 41115453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 605 - 649
Target Start/End: Complemental strand, 23187909 - 23187865
Alignment:
Q  605 aaatttgagtgtaaaaatcaattctagaattagaagctacaattt 649  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||    
T  23187909 aaatttgagtgtaaaattcaattctagaattaaaagctccaattt 23187865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 646
Target Start/End: Original strand, 32523275 - 32523402
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgt------aaaagtgagttgaccaataaatttgagtgtaa 618  Q
    ||||||||| ||| ||||| | |||||||| |||||| ||||||||| |||  |||||||||      | ||||||||| | |  |||||||| ||||||    
T  32523275 aaattgattttgattaaaagttagttgaagataaagtgatttgtgtttggatgcattcatgttcatgtataagtgagttaaactctaaatttgtgtgtaa 32523374  T
Q  619 aaatcaattctagaattagaagctacaa 646  Q
    ||||||||| |||||| | |||||||||    
T  32523375 aaatcaattttagaatcaaaagctacaa 32523402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 190918 - 190871
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||| || |||||||||||| ||||||||||||||| ||||||||    
T  190918 acattcacgtgaaagtgagttgaacaataaatttgagtgcaaaaatca 190871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 731
Target Start/End: Complemental strand, 12674980 - 12674933
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggc 731  Q
    ||||||||||||||  |||||||||||| ||| |||||||||||||||    
T  12674980 aaccaaacatgttaggatcaattctacacctccagaatcaattttggc 12674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 595
Target Start/End: Complemental strand, 14022126 - 14022047
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgag 595  Q
    ||||||||| |||| ||| |  |||||| ||||||| || |||||||||||||||| ||| |||||||| ||||| ||||    
T  14022126 attttgagtgaatttattctatctaaaagtgagttgcagataaagtaatttgtgtttggatacattcatttaaaattgag 14022047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 729
Target Start/End: Complemental strand, 39256660 - 39256597
Alignment:
Q  666 tcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttg 729  Q
    |||||||||||| | || || ||||||||| ||||||||||||||| ||||||||  |||||||    
T  39256660 tcaattctacttgagagtaatcaaacatgtcaaaatcaattctacacctctagaactaattttg 39256597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 672
Target Start/End: Complemental strand, 44771750 - 44771691
Alignment:
Q  613 gtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattc 672  Q
    ||||||||||||||| |||||| | ||||||||| |||||| || | |||||||||||||    
T  44771750 gtgtaaaaatcaattttagaatcaaaagctacaaattctagatttaggtagaatcaattc 44771691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 664 - 742
Target Start/End: Original strand, 41115460 - 41115538
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaat 742  Q
    |||||||||||||||| |  | |||||||||| ||||||| |||||  | ||||||||| |||||||| | ||||||||    
T  41115460 aatcaattctactttaaaacatccaaacatgtcaaaatcagttctatttttctagaatccattttggcccttccaaaat 41115538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 616 - 726
Target Start/End: Complemental strand, 42375578 - 42375468
Alignment:
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctc 715  Q
    |||||||||||||||  || | | ||||||| || ||||||||||||||||  ||||||||| |  | ||||||| |||| | |||||||| || | |||    
T  42375578 taaaaatcaattctatgatcaaacgctacaaattatagcttcaagtagaattgattctacttgaccgcaaccaaaaatgtcagaatcaattatagacctc 42375479  T
Q  716 tagaatcaatt 726  Q
    |||||| ||||    
T  42375478 tagaataaatt 42375468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 616 - 726
Target Start/End: Complemental strand, 42404292 - 42404182
Alignment:
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctc 715  Q
    |||||||||||||||  || | | ||||||| || ||||||||||||||||  ||||||||| |  | ||||||| |||| | |||||||| || | |||    
T  42404292 taaaaatcaattctatgatcaaacgctacaaattatagcttcaagtagaattgattctacttgaccgcaaccaaaaatgtcagaatcaattatagacctc 42404193  T
Q  716 tagaatcaatt 726  Q
    |||||| ||||    
T  42404192 tagaataaatt 42404182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 583 - 673
Target Start/End: Complemental strand, 52364137 - 52364047
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    ||||||||||||||||| |  |||||||  || | |||||||||| |||||| | |||||| || |  ||||||||||||||| |||||||    
T  52364137 atgtaaaagtgagttgaactgtaaatttatgtttgaaaatcaattatagaatcaaaagctataaatcatagcttcaagtagaaacaattct 52364047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 679 - 728
Target Start/End: Complemental strand, 1290753 - 1290704
Alignment:
Q  679 ataggaaccaaacatgttaaaatcaattctacatctctagaatcaatttt 728  Q
    |||| |||||||||  | ||||||||||||||| ||||||||||||||||    
T  1290753 atagcaaccaaacaaatcaaaatcaattctacacctctagaatcaatttt 1290704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 661
Target Start/End: Original strand, 3845130 - 3845191
Alignment:
Q  601 caataaatttgagtgtaaaa-atcaattctagaattagaagctacaatttctagcttcaagt 661  Q
    |||||||||| ||||||||| |||||||||||||| | ||||| || ||||||| |||||||    
T  3845130 caataaattttagtgtaaaaaatcaattctagaatcaaaagctccagtttctagtttcaagt 3845191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 741
Target Start/End: Original strand, 5046174 - 5046251
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||| |||||| || || || ||||||| | |||||||||| |||| ||||||||||||  || ||||||||||||    
T  5046174 aatcaactctactctaaagaaatcaaacatatcaaaatcaattttacacctctagaatcaacattagctcctccaaaa 5046251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 627
Target Start/End: Original strand, 33791984 - 33792049
Alignment:
Q  563 atttgtgttcggacacattcatgtaaaagtgag-ttgaccaataaatttgagtgtaaaaatcaatt 627  Q
    ||||||||| ||| | ||||||||||||||||| || | ||||||||||  |||||||||||||||    
T  33791984 atttgtgtttggatagattcatgtaaaagtgagtttaaacaataaatttatgtgtaaaaatcaatt 33792049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 1e-49; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 586 - 738
Target Start/End: Complemental strand, 8382049 - 8381897
Alignment:
Q  586 taaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaa 685  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||  |||||    
T  8382049 taaaagtgagttgaacaataaacttgaatgtaaaaatcaattctagaactagaggctacaatttctagcttcaagtagaatcaattctgcttttgaggaa 8381950  T
Q  686 ccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctcca 738  Q
    |||||||||| |||||||||| || | ||||||||||||||||| ||||||||    
T  8381949 ccaaacatgtcaaaatcaattttatacctctagaatcaattttgactcctcca 8381897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 535 - 671
Target Start/End: Original strand, 48548965 - 48549099
Alignment:
Q  535 tgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaat 634  Q
    ||||| ||||||||||||||||||| | |||| ||||  || ||||| ||||||||||||||||| ||||||||  |||| |||||||||||||||||||    
T  48548965 tgactcaaattgagttgaaggtaaaatgatttatgttttgatacatttatgtaaaagtgagttgaacaataaat--gagtttaaaaatcaattctagaat 48549062  T
Q  635 tagaagctacaatttctagcttcaagtagaatcaatt 671  Q
     ||||||||||||||||||||||||||||||||||||    
T  48549063 cagaagctacaatttctagcttcaagtagaatcaatt 48549099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 525 - 662
Target Start/End: Complemental strand, 7524257 - 7524120
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| | ||||||| |||| | |||||||||| ||||||||| ||||||||| ||||||||||||||||| | ||||||||| ||||||||||||    
T  7524257 aaattgattctaactaaaagtgagctcaaggtaaagtgatttgtgtttggacacatttatgtaaaagtgagttgaactataaatttgtgtgtaaaaatca 7524158  T
Q  625 attctagaattagaagctacaatttctagcttcaagta 662  Q
    |||||| ||| | ||||||||| | ||| |||||||||    
T  7524157 attctataatcaaaagctacaaatcctaacttcaagta 7524120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 552 - 674
Target Start/End: Original strand, 10324906 - 10325028
Alignment:
Q  552 aaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttct 651  Q
    |||||||||| || |||||  ||| ||||| ||||||||||||||  | ||||||||||||||||||||||||||| |||||| | ||||||||||||||    
T  10324906 aaggtaaagtgatatgtgtatggatacattaatgtaaaagtgagtataacaataaatttgagtgtaaaaatcaattatagaatcaaaagctacaatttct 10325005  T
Q  652 agcttcaagtagaatcaattcta 674  Q
    | ||||||||||| |||||||||    
T  10325006 atcttcaagtagactcaattcta 10325028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 562 - 671
Target Start/End: Complemental strand, 1514450 - 1514341
Alignment:
Q  562 aatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt 661  Q
    |||||||||| ||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||| || ||| | ||||||||| | ||||||||||||    
T  1514450 aatttgtgtttggatacattcatgtaaaaatgagttgaacaataaatttgtgtgtaaaaatcaattatataataaaaagctacaaatcctagcttcaagt 1514351  T
Q  662 agaatcaatt 671  Q
    ||||| ||||    
T  1514350 agaataaatt 1514341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 671
Target Start/End: Original strand, 28083831 - 28083975
Alignment:
Q  526 aattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaa 625  Q
    |||||||||||||||| | ||| ||||| ||||| || |||||||| ||| | ||||||||||||||||| ||| |   ||||||| |||||||||| ||    
T  28083831 aattgattatgactaagagtgaattgaatgtaaatta-tttgtgtttggatatattcatgtaaaagtgagctgaacttgaaatttgtgtgtaaaaattaa 28083929  T
Q  626 ttctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    || |||||| | ||||||||| ||||||||||||||||||||||||    
T  28083930 ttatagaatcaaaagctacaaattctagcttcaagtagaatcaatt 28083975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 516 - 671
Target Start/End: Original strand, 20026096 - 20026251
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||||||||||||||  ||||||   |||||||||||| || |||  |||||    ||||| |  ||||||||| |||| |||||||||||||||    
T  20026096 attttgagtaaattgattatagctaaaagccagttgaaggtaaggtgattaatgttcaagtacatttacataaaagtgaattgaacaataaatttgagtg 20026195  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |  |||||||||||||| ||| |||||  |||||||||||||||||||||||||||    
T  20026196 ttcaaatcaattctagagttaaaagcttgaatttctagcttcaagtagaatcaatt 20026251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 523 - 674
Target Start/End: Original strand, 9939668 - 9939818
Alignment:
Q  523 gtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaat 622  Q
    ||||||||||| || ||||| ||||| | | |||||||| |||| |||   || || |||||||||| |||||||||  ||||||||||||||||||| |    
T  9939668 gtaaattgattttggctaaagttgagctaatggtaaagtgatttatgtctagatacgttcatgtaaa-gtgagttgaataataaatttgagtgtaaaatt 9939766  T
Q  623 caattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    |||||   ||||||||||||||||||| ||||||  ||||||||||||||||    
T  9939767 caattaaggaattagaagctacaatttttagcttatagtagaatcaattcta 9939818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 577 - 676
Target Start/End: Complemental strand, 11049342 - 11049243
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctact 676  Q
    ||||||| |||||||||| |||| | ||||||||| ||||||||||||||| |||||| | ||||||||| | |||||||||||||||||| ||||||||    
T  11049342 acattcacgtaaaagtgacttgaactataaatttgtgtgtaaaaatcaattttagaatcaaaagctacaaatcctagcttcaagtagaatcgattctact 11049243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 603 - 667
Target Start/End: Complemental strand, 3515884 - 3515820
Alignment:
Q  603 ataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatc 667  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  3515884 ataattttgagtgtaaaaatcaattctagaatgaaaagctacaatttctagcttcaagtagaatc 3515820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 568 - 671
Target Start/End: Complemental strand, 3016263 - 3016160
Alignment:
Q  568 tgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatc 667  Q
    |||| ||| ||||||||||||||||||||||| |  |||||||  ||||||| |||||||||||||| | ||||||||| |||||  |||||||||||||    
T  3016263 tgtttggatacattcatgtaaaagtgagttgaaccgtaaatttatgtgtaaacatcaattctagaatcaaaagctacaaattctaagttcaagtagaatc 3016164  T
Q  668 aatt 671  Q
    ||||    
T  3016163 aatt 3016160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 585 - 676
Target Start/End: Original strand, 28287337 - 28287428
Alignment:
Q  585 gtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctact 676  Q
    |||||||| |||||| |||||||||||||||| ||||||||||||| ||| | ||||||||| | || ||||||||||||| ||||||||||    
T  28287337 gtaaaagttagttgaacaataaatttgagtgttaaaatcaattctaaaatcaaaagctacaaatccttgcttcaagtagaaccaattctact 28287428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 539 - 674
Target Start/End: Original strand, 52339683 - 52339818
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattaga 638  Q
    ||||||||||||||||||||| | |||| | ||   | |||||| |||||| |||| |||| |||||||||||||| ||||| |||||||||| ||||||    
T  52339683 taaaattgagttgaaggtaaaattatttatatttatatacattcgtgtaaatgtgacttgaacaataaatttgagtataaaactcaattctagtattaga 52339782  T
Q  639 agctacaatttctagcttcaagtagaatcaattcta 674  Q
    ||||| ||||| || |||||| || |||||| ||||    
T  52339783 agctataatttttaacttcaaataaaatcaactcta 52339818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 578 - 661
Target Start/End: Original strand, 213531 - 213616
Alignment:
Q  578 cattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaa--tttctagcttcaagt 661  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| | |||| ||||  |||||||||||||||    
T  213531 cattcatgtaaaagtgagttgaacaacaaatttgagtttaaaaatcaattctagaatcaaaagccacaatttttctagcttcaagt 213616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 582 - 674
Target Start/End: Complemental strand, 6021891 - 6021799
Alignment:
Q  582 catgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    |||||||||||||||||| | ||||| ||||||||||||||| ||| |||||| | ||||||||  | |||||||||||||||||| ||||||    
T  6021891 catgtaaaagtgagttgaaccataaacttgagtgtaaaaatctattatagaatcaaaagctacatatcctagcttcaagtagaatcgattcta 6021799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 558 - 726
Target Start/End: Complemental strand, 30557613 - 30557441
Alignment:
Q  558 aagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttc 657  Q
    |||| ||||||||| ||| |||||||| |||||||||||||| | ||||||||  |||| ||||||||||||||||| | || |||||| | ||||||||    
T  30557613 aagtgatttgtgtttggatacattcatataaaagtgagttgaactataaattt--gtgtgaaaatcaattctagaatcaaaaactacaaatcctagcttc 30557516  T
Q  658 aagt------agaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaatt 726  Q
    || |      ||||||| |||||||    || |||||||||||| | ||||||||||||| ||| ||||||||||    
T  30557515 aactagaatcagaatcatttctactcggcagtaaccaaacatgtcagaatcaattctacacctccagaatcaatt 30557441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 545 - 662
Target Start/End: Complemental strand, 20720937 - 20720823
Alignment:
Q  545 tgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctac 644  Q
    |||||||| ||||| |  |||| |||| |||||||||   |||||||||||||||   |||||||||| ||||||||||||||||||||| | ||| |||    
T  20720937 tgagttgatggtaatgcgatttatgtttggacacatt---gtaaaagtgagttgaaggataaatttgattgtaaaaatcaattctagaatcataagttac 20720841  T
Q  645 aatttctagcttcaagta 662  Q
    ||||||||| ||||||||    
T  20720840 aatttctagattcaagta 20720823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 578 - 668
Target Start/End: Original strand, 30850393 - 30850483
Alignment:
Q  578 cattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatca 668  Q
    |||||||||||||||||||||| | |||||||||  ||| ||||||||||||| ||||| || |||||| | |||| ||||||||||||||    
T  30850393 cattcatgtaaaagtgagttgaactataaatttgtatgttaaaatcaattctaaaattaaaaactacaaatcctagtttcaagtagaatca 30850483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 589 - 674
Target Start/End: Original strand, 47892393 - 47892478
Alignment:
Q  589 aagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    ||||||||||| |||||  ||| ||||| ||||||||||||||||| | ||||| ||||||||||||| ||||||||||| |||||    
T  47892393 aagtgagttgaacaatatgttttagtgttaaaatcaattctagaatcaaaagcttcaatttctagctttaagtagaatcagttcta 47892478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 586 - 674
Target Start/End: Original strand, 7790644 - 7790732
Alignment:
Q  586 taaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||||||   || |||||| |  || |||||||||||||||||||||    
T  7790644 taaaagtgagttgaacaataaatttgtgtgtaaaaatcaattatagaatctaaatctacaaatcataacttcaagtagaatcaattcta 7790732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 579 - 671
Target Start/End: Original strand, 47321902 - 47321993
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||||||| |||| | ||||||||| || | ||||||||||||||||||| || || ||| ||||||||||||||| ||||||||    
T  47321902 attcatgtaaaagtgaattgaactataaatttgtgtatgaaaatcaattctagaatta-aaactgcaaattctagcttcaagtataatcaatt 47321993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 545 - 624
Target Start/End: Complemental strand, 1233429 - 1233350
Alignment:
Q  545 tgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||||| |||||||| |||||| ||||  || |||||||||| |||||||||| | ||||||||||||||||||||||||    
T  1233429 tgagtttaaggtaaaataatttatgtttagatacattcatgtgaaagtgagttcaacaataaatttgagtgtaaaaatca 1233350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 607 - 669
Target Start/End: Complemental strand, 33693083 - 33693020
Alignment:
Q  607 atttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaa 669  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||||||||| |||||||||    
T  33693083 atttgagtgtaaaaatcaattatagaatcaaaagctacaatttctagcttcaagttagaatcaa 33693020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 516 - 646
Target Start/End: Complemental strand, 34915219 - 34915089
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||| ||| |||| || |||||||||| ||||||| ||||||| | |||| |||| | | |||||||||||||||||||||||   ||||| | | |||    
T  34915219 attttaagtgaatttataatgactaaaagtgagttgcaggtaaaatgatttatgtttgaatacattcatgtaaaagtgagttgaattataaaatggtgtg 34915120  T
Q  616 taaaaatcaattctagaattagaagctacaa 646  Q
    | | ||||||||||||||| | |||||||||    
T  34915119 ttagaatcaattctagaatcaaaagctacaa 34915089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 492 - 632
Target Start/End: Original strand, 6932092 - 6932232
Alignment:
Q  492 ttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaag 591  Q
    ||||||||||||||| |||  || ||||||| | |||||||| ||||||||| ||||||||| ||||| | || |  ||| |||  ||||| |||||| |    
T  6932092 ttggttctgcggtgacaaaatttgattttgaatgaattgattctgactaaaagtgagttgaatgtaaaatgatcttcgtttggattcattcgtgtaaagg 6932191  T
Q  592 tgagttgaccaataaatttgagtgtaaaaatcaattctaga 632  Q
    |||||||| ||||| |||| ||| || ||||||||| ||||    
T  6932192 tgagttgaacaatagattttagtttagaaatcaattgtaga 6932232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 516 - 634
Target Start/End: Complemental strand, 47053564 - 47053441
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtg-------ttcggacacattcatgtaaaagtgagttgaccaataaat 608  Q
    |||||||||||||||||| ||||||| | ||||||| ||||||||| ||| |||       || ||| ||||||||||||||||||||| | | |||||     
T  47053564 attttgagtaaattgattctgactaatagtgagttggaggtaaagtgattggtgtttggaatttggatacattcatgtaaaagtgagttaaactataaa- 47053466  T
Q  609 ttgagtgtaaaaatcaattctagaat 634  Q
     ||||||||||| |||||||||||||    
T  47053465 -tgagtgtaaaattcaattctagaat 47053441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 31829411 - 31829340
Alignment:
Q  70 ttacccaagaacatagatatcagcaggtggagaaatgtgaagccaatcttccagacttaaataacttggagg 141  Q
    |||||| |||||||| ||||||||||| |||||  | |||||||||||||||||| |||||||||| |||||    
T  31829411 ttaccctagaacataaatatcagcaggaggagatgtatgaagccaatcttccagatttaaataactcggagg 31829340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 659
Target Start/End: Complemental strand, 39396016 - 39395898
Alignment:
Q  546 gagttgaaggtaaagtaatttgtgttcggacacattcat-----gtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaag 640  Q
    ||||||||||||||||||||| | || ||| | ||||||     |||||| ||||| || |||||||||||||||||||||| ||||||||||| | ||     
T  39396016 gagttgaaggtaaagtaatttatatttggatatattcattccatgtaaaaatgagtcgaacaataaatttgagtgtaaaaattaattctagaataaaaaa 39395917  T
Q  641 ctacaatttctagcttcaa 659  Q
    || |||||| ||| |||||    
T  39395916 ctccaatttttagattcaa 39395898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 741
Target Start/End: Original strand, 15478119 - 15478176
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||| ||||||||||||||| | ||| |||||| ||||||||||||||||    
T  15478119 aaccaaacatgtcaaaatcaattctacaccgctaaaatcaagtttggctcctccaaaa 15478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 673
Target Start/End: Complemental strand, 24588001 - 24587905
Alignment:
Q  580 ttcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattct--agaattagaagctacaatttct-agcttcaagtagaatcaattct 673  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||| |  ||||| | ||||| |||| ||| | ||||||||||||||| ||||    
T  24588001 ttcatgtaaaagtgagttgaataataaatttgagtgttaaaatcaattatagagaatcaaaagctccaatatctaaacttcaagtagaatcagttct 24587905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 649
Target Start/End: Complemental strand, 31362813 - 31362692
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||| ||||||| |||||||||| |||||||||| | |||| |||| ||| |  ||||||||||| ||  |||| || || |||| |||||||||||||    
T  31362813 aaattaattatga-taaaattgagatgaaggtaaaatgatttatgtttggataatttcatgtaaaattg--ttgaacattacattttagtgtaaaaatca 31362717  T
Q  625 attctagaattagaagctacaattt 649  Q
    |||||| ||| ||||||| ||||||    
T  31362716 attctaaaatcagaagctgcaattt 31362692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 32370003 - 32370112
Alignment:
Q  556 taaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagct 655  Q
    |||||| ||||||||| ||| |||||||||||||||  |||| |   ||||||||| |||||||||  ||||||||||| | ||  ||||| ||||| ||    
T  32370003 taaagtgatttgtgtttggatacattcatgtaaaagcaagttcaattataaatttgtgtgtaaaaaataattctagaataaaaaattacaaattctaact 32370102  T
Q  656 tcaagtagaa 665  Q
    ||||||||||    
T  32370103 tcaagtagaa 32370112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 586 - 671
Target Start/End: Original strand, 38797631 - 38797716
Alignment:
Q  586 taaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||||| | ||||||||| |||| |||||||||||| || ||||||| ||||| |  || ||||||||| ||||||||    
T  38797631 taaaagtgagttgaactataaatttgtgtgtgaaaatcaattcttgatttagaagttacaaatcataacttcaagtataatcaatt 38797716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 673
Target Start/End: Complemental strand, 1003886 - 1003818
Alignment:
Q  605 aaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||| ||||| || |||||||||||||||| || ||||| |||||| |||||| |||||||||||||    
T  1003886 aaatttaagtgtgaatatcaattctagaattaaaaactacattttctaacttcaattagaatcaattct 1003818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 671
Target Start/End: Original strand, 52013498 - 52013566
Alignment:
Q  604 taaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaatt 671  Q
    ||||||||||||||||||||||||||||||| |||  | ||| ||| |||||||||| |||||||||||    
T  52013498 taaatttgagtgtaaaaatcaattctagaatcagagaccacagtttttagcttcaagttagaatcaatt 52013566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 626
Target Start/End: Original strand, 52263625 - 52263689
Alignment:
Q  562 aatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaat 626  Q
    ||||| |||| ||| ||||| |||||||| |||||| | ||||||||||||||||||||||||||    
T  52263625 aatttatgtttggatacattaatgtaaaactgagttaaacaataaatttgagtgtaaaaatcaat 52263689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 545 - 663
Target Start/End: Complemental strand, 27849264 - 27849145
Alignment:
Q  545 tgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttg-accaataaatttgagtgtaaaaatcaattctagaattagaagcta 643  Q
    ||||||||||||||| | ||||||||| ||| |||||||||||||||  ||||| ||   ||| ||||  |||||||||||||||||| || | ||||||    
T  27849264 tgagttgaaggtaaaatgatttgtgttaggatacattcatgtaaaagaaagttgaacttttaagtttgtttgtaaaaatcaattctagtatcaaaagcta 27849165  T
Q  644 caatttctagcttcaagtag 663  Q
    ||  |  |||||||||||||    
T  27849164 cacatcgtagcttcaagtag 27849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 599
Target Start/End: Complemental strand, 5268363 - 5268289
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttga 599  Q
    ||||||||| || |||||| ||||||||| ||||||| |||| |||| | | | |||||||||||||||||||||    
T  5268363 aaattgattctgcctaaaagtgagttgaatgtaaagtgatttttgtttgaatatattcatgtaaaagtgagttga 5268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 5868165 - 5868235
Alignment:
Q  517 ttttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgta 587  Q
    |||||||| ||||||||||||||||||  |||| ||||||||| | ||||||||| ||| || ||||||||    
T  5868165 ttttgagtgaattgattatgactaaaagcgagtcgaaggtaaaatcatttgtgtttggatacgttcatgta 5868235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 741
Target Start/End: Original strand, 18325080 - 18325266
Alignment:
Q  556 taaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagct 655  Q
    |||||| |||| |||  ||| ||||||||||||||||| |||||  ||||||| ||||  |||||||||||| |||||  | || || | | ||||   |    
T  18325080 taaagtgatttatgtatggatacattcatgtaaaagtgggttgaataataaatctgaggataaaaatcaattgtagaaacaaaaactcctaattctgatt 18325179  T
Q  656 tcaag-tagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||| || |||||||||||||  | |  | |||||||||| |||||||||||| ||  ||| |||||| ||||| |||||||||||    
T  18325180 tcaagttaaaatcaattctactcgagaaaatccaaacatgtcaaaatcaattcttcacatctggaatcacttttgtctcctccaaaa 18325266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 580 - 622
Target Start/End: Complemental strand, 27500374 - 27500332
Alignment:
Q  580 ttcatgtaaaagtgagttgaccaataaatttgagtgtaaaaat 622  Q
    ||||||||||| |||||||| ||||||||||||||||||||||    
T  27500374 ttcatgtaaaaatgagttgaacaataaatttgagtgtaaaaat 27500332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 729
Target Start/End: Original strand, 49079312 - 49079377
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttg 729  Q
    ||||||||||||| || | ||||||||||||| |||||||| |||||| |||| ||||| ||||||    
T  49079312 aatcaattctactctagaagaaccaaacatgtcaaaatcaactctacacctctggaatcgattttg 49079377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 659
Target Start/End: Complemental strand, 6041560 - 6041485
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaa 659  Q
    ||||||||||||||| | ||||||||| |||| |||||| |||||||||||| | | ||| ||| ||||||||||||    
T  6041560 atgtaaaagtgagttaaacaataaatt-gagtctaaaaaacaattctagaatcaaaggcttcaaattctagcttcaa 6041485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 634
Target Start/End: Complemental strand, 17284171 - 17284131
Alignment:
Q  594 agttgaccaataaatttgagtgtaaaaatcaattctagaat 634  Q
    |||||| ||||||||||||||||||||||||||| ||||||    
T  17284171 agttgaacaataaatttgagtgtaaaaatcaattttagaat 17284131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 605 - 649
Target Start/End: Complemental strand, 29759676 - 29759632
Alignment:
Q  605 aaatttgagtgtaaaaatcaattctagaattagaagctacaattt 649  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||    
T  29759676 aaatttgagtgtaaaaatcaattatagaatcagaagctccaattt 29759632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 625
Target Start/End: Original strand, 34571088 - 34571223
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaa 588  Q
    ||||||||| |||||||| |||  || ||||| |  ||||||||| ||| ||||| ||||||||| ||||  | |||| | || ||| || || | ||||    
T  34571088 tgtttggttatgcggtgacaaaaattgattttcataaaattgattctgattaaaagtgagttgaatgtaagttcatttatatttggatacgtttaggtaa 34571187  T
Q  589 aagtgagttgaccaataaatttgagtgtaaaaatcaa 625  Q
    |||||| |||| ||||||||||||| |||||||||||    
T  34571188 aagtgaattgaacaataaatttgag-gtaaaaatcaa 34571223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 616 - 672
Target Start/End: Original strand, 37522942 - 37522998
Alignment:
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattc 672  Q
    |||||||||||||||| || | || || ||| |||||||||||||||||||||||||    
T  37522942 taaaaatcaattctaggataaaaaactccaacttctagcttcaagtagaatcaattc 37522998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 665
Target Start/End: Original strand, 51500863 - 51500915
Alignment:
Q  613 gtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaa 665  Q
    |||||||||||||||||||||| | ||||||||| | |||| |||||||||||    
T  51500863 gtgtaaaaatcaattctagaatcaaaagctacaaatcctaggttcaagtagaa 51500915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 735
Target Start/End: Complemental strand, 20720799 - 20720733
Alignment:
Q  668 aattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcct 735  Q
    ||||||||||||  | |||||||||||| ||||||||||||||| || || ||||||||||| |||||    
T  20720799 aattctactttagggaaaccaaacatgtcaaaatcaattctacacct-tataatcaattttgactcct 20720733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 725
Target Start/End: Complemental strand, 24587894 - 24587835
Alignment:
Q  666 tcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaat 725  Q
    |||||||||||  | || |||||||||||| | ||||||||||||| |||||||||||||    
T  24587894 tcaattctactcaagagcaaccaaacatgtcacaatcaattctacacctctagaatcaat 24587835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 630
Target Start/End: Original strand, 37133486 - 37133541
Alignment:
Q  575 acacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattcta 630  Q
    |||||||||| |||||||||||||| |||  |||||||| |||||| |||||||||    
T  37133486 acacattcatttaaaagtgagttgaacaaataatttgagagtaaaagtcaattcta 37133541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 671
Target Start/End: Complemental strand, 43018532 - 43018461
Alignment:
Q  601 caataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaatt 671  Q
    |||||||||||||| |||| |||||||||||||||| ||  | ||| ||||||||||| | |||||||||||    
T  43018532 caataaatttgagtctaaacatcaattctagaattaaaaattccaaattctagcttcatgttagaatcaatt 43018461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 662
Target Start/End: Complemental strand, 44801675 - 44801592
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagta 662  Q
    |||||||||||||||||||||   ||||||||| | |||||||| |||| |||||| | || |||||| | ||| |||||||||    
T  44801675 attcatgtaaaagtgagttgagatataaatttgcgcgtaaaaattaattttagaataaaaaactacaaatcctaacttcaagta 44801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 671
Target Start/End: Complemental strand, 3416192 - 3416078
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| |||||| || ||| |||| ||| ||||| |||||| | | ||||||||| |||||||||||||||||| ||| | || |||||| |  || |||    
T  3416192 aaagttatttgtctttggatacatccatataaaattgagttaaactataaatttgtgtgtaaaaatcaattctaaaataaaaaactacaaatcttaactt 3416093  T
Q  657 caagtagaatcaatt 671  Q
     ||||| ||||||||    
T  3416092 taagtataatcaatt 3416078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 589 - 674
Target Start/End: Complemental strand, 6574261 - 6574175
Alignment:
Q  589 aagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattcta 674  Q
    |||||||||||  ||||||||||||| | ||||| ||||||| ||| | |||||  ||||| |||||| ||| ||||||||||||||    
T  6574261 aagtgagttgaataataaatttgagtctgaaaattaattctacaatcaaaagctctaatttttagcttaaagttagaatcaattcta 6574175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 681 - 735
Target Start/End: Original strand, 9939843 - 9939897
Alignment:
Q  681 aggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcct 735  Q
    ||||||||||||||| ||||| |||| |||| ||||||||||| ||||| |||||    
T  9939843 aggaaccaaacatgtcaaaattaattttacacctctagaatcagttttgcctcct 9939897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 627
Target Start/End: Original strand, 14334036 - 14334106
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaatt 627  Q
    |||| ||||||||||| |||||||||| |||| |||||||| | | ||||||||| || | ||||||||||    
T  14334036 aaagaaatttgtgttcagacacattcacgtaagagtgagtttaactataaatttgtgtatgaaaatcaatt 14334106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 599
Target Start/End: Complemental strand, 35961512 - 35961438
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttga 599  Q
    |||| ||||| | |||||| ||||||||||||||| | |||| ||||   | |||||||||||||||||||||||    
T  35961512 aaatagattacggctaaaagtgagttgaaggtaaaatgatttatgtttctatacattcatgtaaaagtgagttga 35961438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 729
Target Start/End: Original strand, 41517327 - 41517364
Alignment:
Q  692 atgttaaaatcaattctacatctctagaatcaattttg 729  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  41517327 atgtcaaaatcaattctacatctttagaatcaattttg 41517364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 624
Target Start/End: Complemental strand, 48833020 - 48832935
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||| ||||||||| || ||||  ||| |||||||| | |||||  |||| ||||||| |  |||||||||||||||||||||||    
T  48833020 taaaagtgagttgaatgttaagtggtttatgttcggatatattcacataaacgtgagttcaataataaatttgagtgtaaaaatca 48832935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 3e-47; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 516 - 741
Target Start/End: Complemental strand, 34621039 - 34620796
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||| ||| |||| || ||| |||||||||||||||||||| |||| |||| ||| ||||| |||||||||||||||||  ||||||||| ||||    
T  34621039 attttgagtgaatggattctggctagaattgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtg 34620940  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatca------------------attctactttataggaaccaaacatgtta 697  Q
    ||||||||||||||||||| ||||||||  ||||||||||||| |||||||||                  |||||| |||||||||||||||||||| |    
T  34620939 taaaaatcaattctagaatcagaagctatgatttctagcttcatgtagaatcaattccggaggcaaaattaattctagtttataggaaccaaacatgtca 34620840  T
Q  698 aaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||||| || ||||||||||||||| ||||||||||    
T  34620839 aaatcaattctacacctttagaatcaattttgggtcctccaaaa 34620796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 516 - 741
Target Start/End: Complemental strand, 34748476 - 34748233
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||| ||| |||| || ||| |||||||||||||||||||| |||| |||| ||| ||||| |||||||||||||||||  ||||||||| ||||    
T  34748476 attttgagtgaatggattctggctagaattgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtg 34748377  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatca------------------attctactttataggaaccaaacatgtta 697  Q
    ||||||||||||||||||| ||||||||  ||||||||||||| |||||||||                  |||||| |||||||||||||||||||| |    
T  34748376 taaaaatcaattctagaatcagaagctatgatttctagcttcatgtagaatcaattccggaggcaaaattaattctagtttataggaaccaaacatgtca 34748277  T
Q  698 aaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||||| || ||||||||||||||| ||||||||||    
T  34748276 aaatcaattctacacctttagaatcaattttgggtcctccaaaa 34748233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 489 - 741
Target Start/End: Complemental strand, 34063493 - 34063242
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaatttt-gagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgta 587  Q
    ||||||||| | ||||||||||  ||| |||| |||| |||||||||||| |||||||| ||||||| |||||| |||| |||| ||  | ||| |||||    
T  34063493 tgtttggttgtacggtgagaaaaattattttttgagtgaattgattatgattaaaattgggttgaagctaaagtgatttatgtttggttatatttatgta 34063394  T
Q  588 aaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaacc 687  Q
    |||||| ||| | |||||| ||||| ||||||| | ||||||||||| |||| ||||||||||||||||  |||||||||||||||||     |||||||    
T  34063393 aaagtgggtttaacaataagtttgattgtaaaagttaattctagaatgagaacctacaatttctagcttatagtagaatcaattctac--cggaggaacc 34063296  T
Q  688 aaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||| ||||||||||||||| || |||||||||  |||||||||||||||    
T  34063295 aaacatgtcaaaatcaattctacacctgtagaatcaacgttggctcctccaaaa 34063242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 604 - 741
Target Start/End: Complemental strand, 7952599 - 7952462
Alignment:
Q  604 taaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatca 703  Q
    ||||||||||||||||||||||||||||||||||||  ||  |||||||| ||| |||||||||| |||||||||| ||||||||||||||| |||||||    
T  7952599 taaatttgagtgtaaaaatcaattctagaattagaacttatgatttctaggttctagtagaatcagttctactttagaggaaccaaacatgtgaaaatca 7952500  T
Q  704 attctacatctctagaatcaattttggctcctccaaaa 741  Q
     ||||| | ||||||| ||||| |||| ||||||||||    
T  7952499 gttctaaacctctagagtcaatgttggttcctccaaaa 7952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 583 - 674
Target Start/End: Original strand, 1485145 - 1485236
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| | ||||| |||||||||| ||||||||||||||||||||    
T  1485145 atgtaaaagtgagttgaacaataaatttgagtgttaaaatcaattctagaatcaaaagctccaatttctagattcaagtagaatcaattcta 1485236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 578 - 671
Target Start/End: Complemental strand, 852623 - 852530
Alignment:
Q  578 cattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||    
T  852623 cattcatgtaaaagtgagttaaacaatacatttgggtgtaaaaatcaattctagaatcagaacctacaatttctagcttcaagttgaatcaatt 852530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 525 - 673
Target Start/End: Original strand, 31305788 - 31305937
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||||||||  ||||||||  | |||||||||||| | |||| |||| ||| | ||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  31305788 aaattgattccgactaaaagggtgttgaaggtaaaatcatttatgtttggatatattaatgtaaaagtgagttgatcaataaatttgagtgtataaatca 31305887  T
Q  625 attctagaattagaagctacaatttctagcttcaag-tagaatcaattct 673  Q
    |||||||||| | ||||| |||||| |||||||||| |||||||| ||||    
T  31305888 attctagaatcaaaagctccaatttttagcttcaagttagaatcagttct 31305937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 518 - 674
Target Start/End: Complemental strand, 882837 - 882681
Alignment:
Q  518 tttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgta 617  Q
    ||||||| |||||||| |   ||||||||||||||||||||| | |||| |||| ||| ||||||||| ||||||||||| | |||||||||||| ||||    
T  882837 tttgagtgaattgattctagttaaaattgagttgaaggtaaaatgatttatgtttggatacattcatgcaaaagtgagttaaacaataaatttgaatgta 882738  T
Q  618 aaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    |||||||||| | |||| |||| ||| | | | |||||||||||||||||| |||||    
T  882737 aaaatcaatttttgaatcagaacctagactgtttagcttcaagtagaatcagttcta 882681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 516 - 674
Target Start/End: Original strand, 30926711 - 30926869
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    |||| |||| |||||||| |||| ||| |||||| ||||||||| | |||| |||| | | | ||||||| |||||| | |||| |||||||||||||||    
T  30926711 atttggagtgaattgattctgacaaaagttgagtagaaggtaaaatgatttatgtttgaatatattcatgcaaaagtaa-ttgaacaataaatttgagtg 30926809  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattcta 674  Q
    ||||||||||||||||||| | || || ||||||||||||||||| ||||||| ||||||    
T  30926810 taaaaatcaattctagaataaaaaactccaatttctagcttcaagttagaatccattcta 30926869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 538 - 661
Target Start/End: Complemental strand, 9505901 - 9505778
Alignment:
Q  538 ctaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattag 637  Q
    |||||||||||||||||| ||||| || | ||||   | | ||||||||||||||| ||||| |||||||||||||| |||||||||||  |||||| |     
T  9505901 ctaaaattgagttgaaggcaaagtgatatatgttattatatattcatgtaaaagtgtgttgaacaataaatttgagtttaaaaatcaatcatagaatcaa 9505802  T
Q  638 aagctacaatttctagcttcaagt 661  Q
    ||||| ||||||||| ||||||||    
T  9505801 aagctccaatttctatcttcaagt 9505778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 557 - 671
Target Start/End: Complemental strand, 4911020 - 4910906
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| |||| |||| ||| ||||| |||||||||||||| || | |||||||||  ||| ||||||||||||||||| | ||||||||| |  ||||||    
T  4911020 aaagtgatttatgtttggatacatttatgtaaaagtgagtcgaactataaatttgtatgtgaaaatcaattctagaatcaaaagctacaaatcatagctt 4910921  T
Q  657 caagtagaatcaatt 671  Q
    |||||||||||||||    
T  4910920 caagtagaatcaatt 4910906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 525 - 671
Target Start/End: Complemental strand, 2234658 - 2234513
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaa-taaatttgagtgtaaaaatc 623  Q
    ||||||||  || |||||| |||| |||||||||| | |||||  |  ||| ||||| |||||| |||||||||| ||| ||||||||||||| ||||||    
T  2234658 aaattgatgctggctaaaagtgagatgaaggtaaaatgatttgctt--ggatacatttatgtaatagtgagttgaacaaataaatttgagtgttaaaatc 2234561  T
Q  624 aattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||||||| | ||||| || ||| ||||||||||| |||||||||    
T  2234560 aattctagaatcaaaagcttcagtttttagcttcaagttgaatcaatt 2234513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 673
Target Start/End: Original strand, 6654031 - 6654179
Alignment:
Q  526 aattgattatgactaaaattg-agttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||||||| |||| || |||| ||| |||||| ||||||||| |||  | || ||||| |||||  |||| | ||||||||  |||| |||||||    
T  6654031 aattgattatgacgaaaagtgtagttaaagataaagtgatttgtgtttggattcgtttatgtagaagtggtttgaactataaatttctgtgtgaaaatca 6654130  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    | |||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  6654131 aatctagaattaaaagctacaaatcctagcttcaagtagaattaattct 6654179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 540 - 648
Target Start/End: Complemental strand, 24982422 - 24982314
Alignment:
Q  540 aaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaa 639  Q
    ||||||||||||||| ||| || || |  ||| | | |||||||||||||||| |||||| ||| |||||||||||||||||||| ||||| ||||||||    
T  24982422 aaaattgagttgaagttaaggtgatgtaagtttgtatacattcatgtaaaagtaagttgaacaaaaaatttgagtgtaaaaatcagttctaaaattagaa 24982323  T
Q  640 gctacaatt 648  Q
     ||||||||    
T  24982322 tctacaatt 24982314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 577 - 728
Target Start/End: Original strand, 6895943 - 6896094
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctact 676  Q
    |||||||||||||||||| || | | ||||||  | |||  ||||| ||||||||||| | ||||||||| | ||| ||||| |||||||||||| ||||    
T  6895943 acattcatgtaaaagtgaatttatctataaatacgtgtgcgaaaataaattctagaatcaaaagctacaaatcctaacttcaggtagaatcaattgtact 6896042  T
Q  677 ttataggaaccaaacatgttaaaatcaattctacatctctagaatcaatttt 728  Q
      | |  |||||||||||| | ||||||||||||||||| ||||||| ||||    
T  6896043 cgacaacaaccaaacatgtcataatcaattctacatctccagaatcattttt 6896094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 526 - 673
Target Start/End: Complemental strand, 26280747 - 26280601
Alignment:
Q  526 aattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaa 625  Q
    |||||||||||| ||||| || |||||||||||| |||||| ||||  || |  || ||||||||||||||| | | |||||||||   |||||||||||    
T  26280747 aattgattatgattaaaagtgggttgaaggtaaaataatttatgtttagatatgtt-atgtaaaagtgagtttaactataaatttgtacgtaaaaatcaa 26280649  T
Q  626 ttctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    || | |||| | || |||||| |||||||||||||| |||||||||||    
T  26280648 ttttggaatcaaaaactacaaattctagcttcaagtggaatcaattct 26280601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 671
Target Start/End: Original strand, 5724595 - 5724717
Alignment:
Q  549 ttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatt 648  Q
    ||||||||||||| ||||||||| | | |  ||||| |||||||||||| |   ||| ||||| ||||||||||||||| |||||| | ||| ||||| |    
T  5724595 ttgaaggtaaagtgatttgtgtttgaatatgttcatataaaagtgagttaaatgatatatttgtgtgtaaaaatcaattatagaataaaaagttacaaat 5724694  T
Q  649 tctagcttcaagtagaatcaatt 671  Q
     ||||||||||||||||||||||    
T  5724695 cctagcttcaagtagaatcaatt 5724717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 577 - 649
Target Start/End: Complemental strand, 17225944 - 17225872
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaattt 649  Q
    |||||||||||||| |||||||| | |||||||||  ||||||||||||||||||||| | ||||||||||||    
T  17225944 acattcatgtaaaactgagttgaactataaatttgtatgtaaaaatcaattctagaatcaaaagctacaattt 17225872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 671
Target Start/End: Complemental strand, 25388221 - 25388075
Alignment:
Q  524 taaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatc 623  Q
    |||||||||| ||||| ||| ||||||| ||||||  | ||||   || ||| | ||| |||||||||||||||||| ||||||||||||||| ||||||    
T  25388221 taaattgattctgacttaaaatgagttggaggtaatatgatttacatttggatatatttatgtaaaagtgagttgac-aataaatttgagtgtcaaaatc 25388123  T
Q  624 aattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||| ||| | |  || |||||||| | ||||| |||||||||||    
T  25388122 aattctaaaatcaaagacttcaatttcttgtttcaattagaatcaatt 25388075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 634
Target Start/End: Original strand, 34027412 - 34027467
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaat 634  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  34027412 attcatgtaagagtgagttgaataataaatttgagtgtaaaaatcaattctagaat 34027467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 547 - 673
Target Start/End: Complemental strand, 8855041 - 8854916
Alignment:
Q  547 agttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaa 646  Q
    ||||||||||||| ||||||||||| | | ||||| |||||||||| |||| | | |||||||||  ||||||||||||||||| | | | || ||||||    
T  8855041 agttgaaggtaaaataatttgtgtttg-atacattaatgtaaaagtaagttcaaccataaatttgtatgtaaaaatcaattctatagtcaaaaactacaa 8854943  T
Q  647 tttctagcttcaagtagaatcaattct 673  Q
     || |||||||| |||||| |||||||    
T  8854942 attgtagcttcatgtagaaacaattct 8854916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 588 - 673
Target Start/End: Complemental strand, 34898777 - 34898691
Alignment:
Q  588 aaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaat-tagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||  | || ||  ||||||||||||||||||||||| |||||    
T  34898777 aaagtgagttgaacaataaattcgagtgttaaaatcaattctagaataaaaaaactctaatttctagcttcaagtagaatcgattct 34898691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 674
Target Start/End: Complemental strand, 3482158 - 3482041
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| ||||||||| | | |||||||||||||||| |||||| | ||||| ||| |||| ||||||||||||| ||| | | ||||||| |  || |||    
T  3482158 aaagtgatttgtgtttgaatacattcatgtaaaagtaagttgaactataaacttgtgtgtgaaaatcaattctaaaatcaaaggctacaaatcttaactt 3482059  T
Q  657 caagtagaatcaattcta 674  Q
    |||||| |||||||||||    
T  3482058 caagtataatcaattcta 3482041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 673
Target Start/End: Complemental strand, 8860621 - 8860500
Alignment:
Q  552 aaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttct 651  Q
    |||||||| |||||||||||  || ||||||||| ||||||||||||| | ||||||||  |||| ||||||||||||  | ||| ||||||||| |  |    
T  8860621 aaggtaaaataatttgtgtttagatacattcatgcaaaagtgagttgaaccataaatttatgtgtcaaaatcaattcttaacttaaaagctacaaatcat 8860522  T
Q  652 agcttcaagtagaatcaattct 673  Q
     |||||||| |||| |||||||    
T  8860521 tgcttcaagcagaagcaattct 8860500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 537 - 673
Target Start/End: Complemental strand, 25195980 - 25195846
Alignment:
Q  537 actaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaatta 636  Q
    ||||||| |||||||| || |||||  |||||||| ||| ||||| ||||||  ||||||||| | ||||||||| ||||| || ||||||||||||| |    
T  25195980 actaaaaatgagttgagggcaaagttgtttgtgtttggatacatttatgtaa--gtgagttgaactataaatttgtgtgtacaattcaattctagaatca 25195883  T
Q  637 gaagctacaatttctagcttcaagtagaatcaattct 673  Q
     |||||| || | |||| || || |||||||||||||    
T  25195882 aaagctataaatcctagttttaattagaatcaattct 25195846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 741
Target Start/End: Complemental strand, 33997165 - 33997108
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||| ||||||||||    
T  33997165 aaccaaacatgtcaaaatcgattctaaatctctagaatcaattttggttcctccaaaa 33997108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 673
Target Start/End: Original strand, 765326 - 765475
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcat---gtaaaagtgagttgaccaataaatttgagtgtaaaaa 621  Q
    ||||||||| | ||||||| | ||||||| ||||||| |||||||||   | |||||| |   |||||| |||||||| | ||||||||   | ||| ||    
T  765326 aaattgattctaactaaaagtaagttgaaagtaaagtgatttgtgtttccatacattcttcttgtaaaaatgagttgaactataaatttc--tttaataa 765423  T
Q  622 tcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    ||||||||||||| | ||||||||| |  |||||||||||||||||||||||    
T  765424 tcaattctagaatcaaaagctacaaatcatagcttcaagtagaatcaattct 765475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 530 - 643
Target Start/End: Original strand, 434183 - 434296
Alignment:
Q  530 gattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattct 629  Q
    ||||||| |||||| ||||||| ||||||| | ||||||||| ||| | |||| ||||||||||||||||    |||||||  || ||||||||||||||    
T  434183 gattatggctaaaagtgagttgcaggtaaaatgatttgtgtttggatatattcgtgtaaaagtgagttgaaatttaaatttatgtataaaaatcaattct 434282  T
Q  630 agaattagaagcta 643  Q
    | ||| | ||||||    
T  434283 aaaatcaaaagcta 434296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 587 - 656
Target Start/End: Complemental strand, 10874576 - 10874507
Alignment:
Q  587 aaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||||||||||| || ||| ||||| ||||||||||||||||||||| | |||||  ||||||||||||    
T  10874576 aaaagtgagttgaacactaagtttgaatgtaaaaatcaattctagaatcaaaagctctaatttctagctt 10874507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 741
Target Start/End: Complemental strand, 19601799 - 19601727
Alignment:
Q  670 ttctactttataggaaccaaacatgttaaaat-caattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||| || ||||||||||||| | ||||  ||||||||||||||| |||||||||||| |||||||||||    
T  19601799 ttctactctagaggaaccaaacatctcaaaaaacaattctacatctctggaatcaattttgactcctccaaaa 19601727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 672
Target Start/End: Original strand, 25195339 - 25195452
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||||    |||||||| || | |||||||||| |||||| | || |||||| | |  ||||    
T  25195339 aaagtgatttgtgtttggatacatttatgtaaaagtgagttgaattgtaaatttgtgtatgaaaatcaattatagaatgaaaaactacaaatcc--gctt 25195436  T
Q  657 caagtagaatcaattc 672  Q
    ||||||||||||||||    
T  25195437 caagtagaatcaattc 25195452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 28466889 - 28466957
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggta 557  Q
    ||||||||||||||| ||||||   | ||||||||| |||||||| || ||||||||||||||||||||    
T  28466889 tgtttggttctgcggcgagaaaaaatgattttgagtgaattgattctggctaaaattgagttgaaggta 28466957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 34736844 - 34736776
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggta 557  Q
    ||||||||||||||| ||||||   | ||||||||| |||||||| || ||||||||||||||||||||    
T  34736844 tgtttggttctgcggcgagaaaaaatgattttgagtgaattgattctggctaaaattgagttgaaggta 34736776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 646
Target Start/End: Complemental strand, 34911095 - 34910970
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||| ||||||||  |||||||| |||||||||||| |||| |||| |||| ||  | |||||||||||||| |||| | | ||||  ||| |||    
T  34911095 attttgagtgaattgattccgactaaaagtgagttgaaggt-aagtgatttatgtttgg--atattcatgtaaaagttagttaaactataa--ttgtgtg 34911001  T
Q  616 taaaaatcaattctagaattagaagctacaa 646  Q
    | ||||||||||||||||| | |||||||||    
T  34911000 tcaaaatcaattctagaatcaaaagctacaa 34910970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 564 - 671
Target Start/End: Complemental strand, 16540212 - 16540105
Alignment:
Q  564 tttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtag 663  Q
    |||||||| ||| ||||| ||||||||||||||| | | |||||| ||   || ||| ||||||| | ||| | ||||||||| | ||||||||||||||    
T  16540212 tttgtgtttggatacattgatgtaaaagtgagtttaactataaatatgtaagtgaaactcaattcaataatcaaaagctacaaatcctagcttcaagtag 16540113  T
Q  664 aatcaatt 671  Q
    ||||||||    
T  16540112 aatcaatt 16540105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 592 - 674
Target Start/End: Complemental strand, 6051018 - 6050936
Alignment:
Q  592 tgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    |||||||| |||||||||| | ||||||| | ||||||||||||||||| ||||| |  ||  |||| |||||||||||||||    
T  6051018 tgagttgaacaataaatttaaatgtaaaacttaattctagaattagaagttacaaatgttaatttcaggtagaatcaattcta 6050936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 684 - 732
Target Start/End: Original strand, 33136601 - 33136649
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggct 732  Q
    |||||||||||| |||||||||| |||| ||||||||| ||||||||||    
T  33136601 aaccaaacatgtcaaaatcaattatacacctctagaattaattttggct 33136649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 565
Target Start/End: Original strand, 35098399 - 35098439
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatt 565  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  35098399 aaattgattttgactaaaagtgagttgaaggtaaagtaatt 35098439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 616
Target Start/End: Complemental strand, 3289888 - 3289798
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgt 616  Q
    |||||||||  |||| ||| ||||||| || |||||| ||||||||| ||| ||||| |||||||||||||||||   ||||||||| ||||    
T  3289888 aaattgatttcgacttaaagtgagttgcagataaagtgatttgtgtttggatacatt-atgtaaaagtgagttgaattataaatttgtgtgt 3289798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 8856428 - 8856377
Alignment:
Q  548 gttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttga 599  Q
    |||||||||||| | ||||||||| ||| |||||||||| ||||||||||||    
T  8856428 gttgaaggtaaaatgatttgtgtttggatacattcatgtgaaagtgagttga 8856377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 739
Target Start/End: Original strand, 10400814 - 10400869
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaa 739  Q
    |||||||||| | |||||||||| |||| |||||||||||||||||  ||||||||    
T  10400814 aaccaaacatatcaaaatcaattatacacctctagaatcaattttgcatcctccaa 10400869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 599
Target Start/End: Original strand, 46229 - 46303
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttga 599  Q
    ||||||||| | ||||||| ||||||| |  |||||| ||||||||| ||| |||||| || |||||||||||||    
T  46229 aaattgattctaactaaaagtgagttgcaattaaagttatttgtgtttggatacattcgtggaaaagtgagttga 46303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 671
Target Start/End: Complemental strand, 1500044 - 1499898
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| || ||||||  |||||||  ||||| | |||| |||| | | ||||| ||||||||||||||  | ||| |||||||||| | ||||| |    
T  1500044 aaattgattttggctaaaagcgagttgagtgtaaattgatttatgtttgaatacatttatgtaaaagtgagtctagcaacaaatttgagttttaaaatta 1499945  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||| || | | | || || |||||| ||||||||||||| |||||||    
T  1499944 attttatactaaaaaacttcaatttttagcttcaagtagtatcaatt 1499898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 662 - 736
Target Start/End: Original strand, 25195460 - 25195534
Alignment:
Q  662 agaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctc 736  Q
    |||||||||| ||||  |||| |||||||||||| | |||||||| ||||  || |||||||||||||| |||||    
T  25195460 agaatcaattatactcgatagcaaccaaacatgtcagaatcaattatacacatccagaatcaattttggttcctc 25195534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 622 - 664
Target Start/End: Complemental strand, 26679962 - 26679920
Alignment:
Q  622 tcaattctagaattagaagctacaatttctagcttcaagtaga 664  Q
    |||||| |||||| ||||||| |||||||||||||||||||||    
T  26679962 tcaattatagaatcagaagctgcaatttctagcttcaagtaga 26679920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 633
Target Start/End: Original strand, 34026614 - 34026668
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaa 633  Q
    |||||||||||| ||||||||  ||| ||||| |||||||||||||||| |||||    
T  34026614 attcatgtaaaaatgagttgaataattaatttaagtgtaaaaatcaattgtagaa 34026668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 624
Target Start/End: Original strand, 6364614 - 6364655
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||| |||||||||||| |||||||||||| |||||||||||    
T  6364614 atgtgaaagtgagttgaacaataaatttgattgtaaaaatca 6364655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 729
Target Start/End: Original strand, 29240550 - 29240615
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttg 729  Q
    |||||||||||||| | |  | || ||||||| |||||||||| |||| |||||||||||||||||    
T  29240550 aatcaattctacttgaaaatatcctaacatgtcaaaatcaattttacacctctagaatcaattttg 29240615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 733
Target Start/End: Original strand, 33141805 - 33141874
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctc 733  Q
    |||||||| ||||| | || |||||||||| | |||||||||| ||||   |||||||||||||||||||    
T  33141805 aatcaattatacttgagagcaaccaaacatatcaaaatcaattttacactgctagaatcaattttggctc 33141874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 671
Target Start/End: Original strand, 35098228 - 35098261
Alignment:
Q  638 aagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||||||||||||| |||||||||||    
T  35098228 aagctacaatttctagcttcaattagaatcaatt 35098261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 4e-40; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 525 - 669
Target Start/End: Complemental strand, 32928036 - 32927892
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| | ||||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||| | ||||||||| |||||||||| |    
T  32928036 aaattgattcttactaaaattgagttgaaggcaaagtgatttgtgtttggatacattcatgtaaaagtgagttgaactataaatttgtgtgtaaaaatga 32927937  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaa 669  Q
    |||||| ||| | ||||||||| | ||||||||||||||||||||    
T  32927936 attctataatcaaaagctacaaatcctagcttcaagtagaatcaa 32927892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 525 - 674
Target Start/End: Original strand, 26100087 - 26100236
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| |||||||||  |||||||||||||||  ||||||||| |||  |||| ||||||||||||||||| | ||||||||| ||||||||||||    
T  26100087 aaattgattctgactaaaaacgagttgaaggtaaagctatttgtgtttggatgcatttatgtaaaagtgagttgaaccataaatttgtgtgtaaaaatca 26100186  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    ||| |||||| | ||||||||| | |||||||||| ||||| ||||||||    
T  26100187 attatagaatcaaaagctacaaatcctagcttcaaatagaaccaattcta 26100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 526 - 669
Target Start/End: Original strand, 16972006 - 16972149
Alignment:
Q  526 aattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaa 625  Q
    ||||||||  |||||||| ||||||||||||||| | ||||||||| | | |||||||||||||||||| |||| ||||||||||| || ||||||||||    
T  16972006 aattgattcagactaaaagtgagttgaaggtaaaatgatttgtgtttgaatacattcatgtaaaagtgatttgaacaataaatttgtgtttaaaaatcaa 16972105  T
Q  626 ttctagaattagaagctacaatttctagcttcaagtagaatcaa 669  Q
    ||||| ||||| || |||||| |||||||||||| || ||||||    
T  16972106 ttctaaaattaaaaactacaaattctagcttcaaatacaatcaa 16972149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 579 - 728
Target Start/End: Original strand, 15677810 - 15677960
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaa-atcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactt 677  Q
    |||||||||| | |||||||| | ||||||||| |||||||| |||||||||| ||| | |||||| || | ||||||||||||||||||||||||| ||    
T  15677810 attcatgtaacaatgagttgaactataaatttgtgtgtaaaaaatcaattctataatcaaaagctataaatcctagcttcaagtagaatcaattctattt 15677909  T
Q  678 tataggaaccaaacatgttaaaatcaattctacatctctagaatcaatttt 728  Q
     | || |||||||||||| | |||||||| |||| ||| | ||||||||||    
T  15677910 gaaagcaaccaaacatgtcagaatcaattgtacaactccacaatcaatttt 15677960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 525 - 726
Target Start/End: Original strand, 32994181 - 32994384
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagta--atttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaat 622  Q
    ||||||||| || || ||| ||||||||||||||| |   |||| |||| |||| ||||||||||||||| | |||  | ||||||||| || |||||||    
T  32994181 aaattgattctggctgaaagtgagttgaaggtaaaatttgatttatgtttggactcattcatgtaaaagtcatttgcactataaatttgtgtataaaaat 32994280  T
Q  623 caattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatc 722  Q
    |||||||||| | | |||||| || |  |||||||||||||||||||||||||   | || |||||||||| | | |||||||||||||  || ||||||    
T  32994281 caattctagactcaaaagctagaaatcatagcttcaagtagaatcaattctacacgaaagcaaccaaacatatcataatcaattctacacatccagaatc 32994380  T
Q  723 aatt 726  Q
    ||||    
T  32994381 aatt 32994384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 525 - 669
Target Start/End: Complemental strand, 35495134 - 35494990
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||||| || ||| ||||| || ||||||  |||||| ||||||||| ||| | |||||||||||||| |||||| | ||| ||||| ||||||||| ||    
T  35495134 aaattgcttctgattaaaagtgggttgaatataaagtgatttgtgtttggatatattcatgtaaaagtaagttgaactatagatttgtgtgtaaaaaaca 35495035  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaa 669  Q
    |||||||||| | ||||||||| | ||||||||| ||||||||||    
T  35495034 attctagaatcaaaagctacaaatcctagcttcatgtagaatcaa 35494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 583 - 671
Target Start/End: Original strand, 13384653 - 13384741
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||||||||||||| | ||||||||| |||| ||||||||||||||||| | ||||||||| || ||||||||| |||||||||||    
T  13384653 atgtaaaagtgagttgaactataaatttgtgtgtgaaaatcaattctagaatcaaaagctacaaattttagcttcaaatagaatcaatt 13384741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 525 - 672
Target Start/End: Original strand, 4662848 - 4662991
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| ||||||||| |||||| || ||| |    |||||||| ||| ||||||| | ||||| ||||||| | ||| ||||| ||||||||||||    
T  4662848 aaattgattctgactaaaactgagttaaatgtaga----tttgtgtttggatacattcacggaaaagcgagttgaactatacatttgtgtgtaaaaatca 4662943  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaattc 672  Q
    |||||||||  | ||||||||| | ||||||||||||||||| |||||    
T  4662944 attctagaaacaaaagctacaaatcctagcttcaagtagaataaattc 4662991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 525 - 671
Target Start/End: Complemental strand, 4950627 - 4950482
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||||||||||  ||| |||||||||||||||||||| |||| |||| ||| | ||| |||  ||||||||||||  ||||||||| ||||||||||| |    
T  4950627 aaattgattattgctataattgagttgaaggtaaagtgatttatgtttggatatatttatgagaaagtgagttgaaaaataaatttaagtgtaaaaatta 4950528  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||| ||||| | ||||||  ||| ||||||||||||  ||||||||    
T  4950527 attcaagaatcataagcta-gattgctagcttcaagtctaatcaatt 4950482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 539 - 676
Target Start/End: Original strand, 38335816 - 38335953
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattaga 638  Q
    ||||| |||||||||||| || | ||||||||||||| |||||||||||||||||||||     ||||||||| | |||||||||||||||| ||| | |    
T  38335816 taaaagtgagttgaaggtgaattgatttgtgttcggatacattcatgtaaaagtgagttagaatataaatttgtgcgtaaaaatcaattctaaaatcaaa 38335915  T
Q  639 agctacaatttctagcttcaagtagaatcaattctact 676  Q
    ||| |||| |  ||||||||| | ||||||||| ||||    
T  38335916 agcaacaaatcttagcttcaactggaatcaattatact 38335953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 671
Target Start/End: Complemental strand, 32056484 - 32056362
Alignment:
Q  548 gttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaat 647  Q
    |||||| ||||||| || | || | |||| |||||||||||||||||||||| || || | ||| ||||||||||||||||||||| |||||||| ||||    
T  32056484 gttgaaagtaaagtgatctatggttggacgcattcatgtaaaagtgagttgaacagtata-ttgggtgtaaaaatcaattctagaa-tagaagctccaat 32056387  T
Q  648 ttctagcttcaag-tagaatcaatt 671  Q
    ||||||||| ||| |||||||||||    
T  32056386 ttctagcttaaagttagaatcaatt 32056362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 583 - 671
Target Start/End: Original strand, 38537357 - 38537445
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||| ||| ||||| ||||| |||||||||| |||||||| |||||||| ||||| |||| ||||||||||||||||||| |||||    
T  38537357 atgtaaaggtgtgttgaacaatacatttgagtgtgaaaatcaactctagaatcagaaggtacagtttctagcttcaagtagaaacaatt 38537445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 563 - 674
Target Start/End: Complemental strand, 35495366 - 35495255
Alignment:
Q  563 atttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagta 662  Q
    |||| |||| ||| |||||||  ||||||||| |||| |||||||||||||| |||||||||||| |||||| |||| ||| |   | ||||||||||||    
T  35495366 atttatgtttggatacattcaaataaaagtgatttgaacaataaatttgagtataaaaatcaattatagaatcagaatctagatagtgtagcttcaagta 35495267  T
Q  663 gaatcaattcta 674  Q
    ||||||||||||    
T  35495266 gaatcaattcta 35495255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 513 - 643
Target Start/End: Complemental strand, 32767543 - 32767413
Alignment:
Q  513 ttaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgt--aaaagtgagttgaccaataaattt 610  Q
    |||||||||||| |||||||||||  ||||| ||||||| | ||||| | |||| |||| ||| ||||||||||  ||||||||||||| ||||||||||    
T  32767543 ttaattttgagtgaattgattatg--taaaagtgagttggatgtaaattgatttatgtttggatacattcatgtgtaaaagtgagttgaacaataaattt 32767446  T
Q  611 gagtgtaaaaatcaattctagaattagaagcta 643  Q
     ||||||||| ||| |||| |||| | ||||||    
T  32767445 aagtgtaaaagtcagttctcgaatcaaaagcta 32767413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 677
Target Start/End: Complemental strand, 30099052 - 30098902
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| |||| |||| ||| | ||| ||||||| |||| || ||||| | ||| ||||||||||||||| | | ||||||||   ||||||||| |    
T  30099052 aaattgattctgaccaaaagtgaatagaatgtaaagtgatttatgatcggatatatttatgtaaaagtgagttaaactataaatttt--tgtaaaaatta 30098955  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaattctactt 677  Q
    ||||||||||   ||||||||| |||||||||||| || |||||||| |||||    
T  30098954 attctagaatcgaaagctacaaattctagcttcaaataaaatcaattttactt 30098902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 664 - 741
Target Start/End: Original strand, 39648243 - 39648320
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||| |||| || || |||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||    
T  39648243 aatcaattttactatagagaaaccaaacatgtcaaaatcaattatacatctctagaatcaattttgactcctctaaaa 39648320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 517 - 642
Target Start/End: Original strand, 42458264 - 42458388
Alignment:
Q  517 ttttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgt 616  Q
    |||||| | |||||||| || |||||||   |||||||||||| || ||| |||||||| |||||||||||||| |||||||| ||||| | |  |||||    
T  42458264 ttttgaatgaattgattctggctaaaatcatgttgaaggtaaaatagtttatgttcggatacattcatgtaaaaatgagttgaacaatatactcaagtgt 42458363  T
Q  617 aaaaatcaattctagaattagaagct 642  Q
    ||||| ||||||| ||||||||||||    
T  42458364 aaaaaacaattct-gaattagaagct 42458388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 540 - 660
Target Start/End: Complemental strand, 4554635 - 4554515
Alignment:
Q  540 aaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaa 639  Q
    |||||||||||||||||||  | |||||||||  || |||||| |||||||| | ||||| |||||||||| ||| |||| || | ||||| ||| ||||    
T  4554635 aaaattgagttgaaggtaagatgatttgtgttttgatacattcctgtaaaagcgggttgaacaataaatttaagtataaatattagttctataatcagaa 4554536  T
Q  640 gctacaatttctagcttcaag 660  Q
    |||||| |||||| |||||||    
T  4554535 gctacattttctatcttcaag 4554515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 610
Target Start/End: Complemental strand, 8700980 - 8700895
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaattt 610  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||   | | |||| |||||||||||||||| ||||| ||||    
T  8700980 aaattgattatgtttaaaattgagttgaaggtaaagtaatttatgtttaaataaattcttgtaaaagtgagttgaacaatatattt 8700895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 37684517 - 37684401
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||||   ||||||||  |  | |||||||||| |||||| | |||| |||| | ||| |||    
T  37684517 aaagtgatttgtgtttggatacatttatgtaaaagtgagttgaattataaatttttgcattaaaatcaattttagaatcaaaagccacaaatcctaactt 37684418  T
Q  657 caagtagaatcaattct 673  Q
    |||||||||||||||||    
T  37684417 caagtagaatcaattct 37684401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 584 - 671
Target Start/End: Complemental strand, 38868583 - 38868496
Alignment:
Q  584 tgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||| |||||||| | ||||||||| |||| |||||||||| |||||  | ||||||||| |  |||||||||||||||||||||    
T  38868583 tgtaaaattgagttgaactataaatttgtgtgtgaaaatcaattatagaaccaaaagctacaaatcttagcttcaagtagaatcaatt 38868496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 669
Target Start/End: Complemental strand, 14382482 - 14382396
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaa 669  Q
    ||||||||||||||||| |||||||||  ||||||||| | |||| || |||| ||  |||||||||||| |||||| |||||||||    
T  14382482 atgtaaaagtgagttgaacaataaattaaagtgtaaaatttaattataaaatttgatactacaatttctaacttcaaatagaatcaa 14382396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 632
Target Start/End: Original strand, 18356028 - 18356135
Alignment:
Q  523 gtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaat 622  Q
    ||||||||||| | ||||||| |||||||||||||| |   ||| |||||||| ||||| || |||| |||||||||   ||||||||  ||||||||||    
T  18356028 gtaaattgattctaactaaaagtgagttgaaggtaagggggtttatgttcggatacatttatctaaacgtgagttgaattataaattt--gtgtaaaaat 18356125  T
Q  623 caattctaga 632  Q
    ||||||||||    
T  18356126 caattctaga 18356135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 630
Target Start/End: Complemental strand, 32809836 - 32809746
Alignment:
Q  540 aaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattcta 630  Q
    |||| ||||||||||||||||| ||||||||| ||    ||||||||||||||  ||||| ||||| |||| ||||||||| |||||||||    
T  32809836 aaaaatgagttgaaggtaaagtgatttgtgtttggttctattcatgtaaaagtttgttgaacaatagatttaagtgtaaaattcaattcta 32809746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 590
Target Start/End: Complemental strand, 10368109 - 10368044
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaa 590  Q
    ||||||||| ||| ||||| ||||||||||||||||| |||||||||  || ||||||||||||||    
T  10368109 aaattgattttgagtaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaa 10368044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 688 - 733
Target Start/End: Complemental strand, 32767346 - 32767301
Alignment:
Q  688 aaacatgttaaaatcaattctacatctctagaatcaattttggctc 733  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  32767346 aaacatgtcaaaatcaattctatatctctagaatcaattttggctc 32767301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 589 - 661
Target Start/End: Original strand, 4336630 - 4336702
Alignment:
Q  589 aagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt 661  Q
    |||||| |||| |||||||||||||||||||||| ||||||| ||| | |||||  | |||||||||||||||    
T  4336630 aagtgatttgaacaataaatttgagtgtaaaaattaattctaaaataaaaagctcaattttctagcttcaagt 4336702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 715
Target Start/End: Original strand, 18355850 - 18355979
Alignment:
Q  584 tgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttatagg 683  Q
    |||||||| ||||||| |  ||||||||  |||||||||||||| |||||| | |||  |||| | ||||||||||  |||||||||||||||  | |      
T  18355850 tgtaaaagggagttgaactttaaatttg--tgtaaaaatcaattttagaatcaaaagacacaaatcctagcttcaatcagaatcaattctactcgaaaac 18355947  T
Q  684 aaccaaacatgttaaaatcaattctacatctc 715  Q
    || || |||||| |||||||||||||||||||    
T  18355948 aatcatacatgtcaaaatcaattctacatctc 18355979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 539 - 627
Target Start/End: Complemental strand, 32736592 - 32736504
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaatt 627  Q
    ||||| |||||  |||||||| |||||||| || | | |||||||||||||||||| |||| | ||||||||| |||||||||| ||||    
T  32736592 taaaagtgagtcaaaggtaaaataatttgtatttgaatacattcatgtaaaagtgaattgaactataaatttgtgtgtaaaaattaatt 32736504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 671 - 741
Target Start/End: Complemental strand, 4554486 - 4554416
Alignment:
Q  671 tctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||| || ||||||||||  ||| ||||| |||||||||  |||||||||||||| |||||||||||||    
T  4554486 tctactctagaggaaccaaatctgtcaaaatgaattctacacttctagaatcaatttgggctcctccaaaa 4554416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 628
Target Start/End: Original strand, 5859057 - 5859107
Alignment:
Q  578 cattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattc 628  Q
    |||||||||||||||||||||| | ||||| ||| ||||||||||||||||    
T  5859057 cattcatgtaaaagtgagttgaaccataaaattgtgtgtaaaaatcaattc 5859107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 624
Target Start/End: Complemental strand, 2924863 - 2924822
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  2924863 atgtaaaagtgagttgatcaatatatttgagtgtaaaaatca 2924822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 579 - 620
Target Start/End: Original strand, 9695435 - 9695476
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaa 620  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  9695435 attcatgtaaaagtgagttgaagaataaatttgagtgtaaaa 9695476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 671
Target Start/End: Original strand, 10550829 - 10550910
Alignment:
Q  590 agtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||| |||||| ||||| |  ||||||||| |||||| |||| || |||||| || ||| ||||||||||||||    
T  10550829 agtgagttgaccgataaatgtgagtcttcaaatcaattttagaataagaaacttcaatttttaactttaagtagaatcaatt 10550910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 666
Target Start/End: Complemental strand, 32101185 - 32101076
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| ||||||||  ||| ||||| ||||||||||||||||| | |||||||||  | | ||||| |||| || ||||| || |||||| ||||| |||    
T  32101185 aaagtgatttgtgtgtggatacatttatgtaaaagtgagttgaactataaatttgtatatgaaaattaattttaaaattaaaaactacaaattctaactt 32101086  T
Q  657 caagtagaat 666  Q
     |||||||||    
T  32101085 taagtagaat 32101076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 668 - 741
Target Start/End: Complemental strand, 35495243 - 35495170
Alignment:
Q  668 aattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||| |||| || ||| |||||||| |||||||||||||||  | ||||||||||||||| | ||||||||    
T  35495243 aattctaatttagagaaacaaaacatgtcaaaatcaattctacacttgtagaatcaattttgggtgctccaaaa 35495170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 613
Target Start/End: Complemental strand, 3279081 - 3279026
Alignment:
Q  558 aagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgag 613  Q
    ||||||||||| || ||| | ||||||||||||||||||||| || ||||||||||    
T  3279081 aagtaatttgtttttggatatattcatgtaaaagtgagttgaacattaaatttgag 3279026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 671
Target Start/End: Original strand, 13418815 - 13418906
Alignment:
Q  580 ttcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||| ||| |||||||| | |||||||||| ||| |||||||||| | |||| | ||||| | ||||||  ||| ||||||||||||||    
T  13418815 ttcatgttaaattgagttgaacgataaatttgaatgttaaaatcaattatggaatcaaaagctccgatttcttactttaagtagaatcaatt 13418906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 721
Target Start/End: Complemental strand, 26668541 - 26668482
Alignment:
Q  662 agaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaat 721  Q
    |||||||||||||||  | | ||| ||||||||||| ||||||||||||||||| |||||    
T  26668541 agaatcaattctactcgacaagaatcaaacatgttagaatcaattctacatctccagaat 26668482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 735
Target Start/End: Complemental strand, 41614831 - 41614760
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcct 735  Q
    |||||||||||||| | |  | ||||||| || |||||||||| || | |||||||||||||||||||||||    
T  41614831 aatcaattctacttgaaaccatccaaacaagtcaaaatcaattttatacctctagaatcaattttggctcct 41614760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 599
Target Start/End: Original strand, 9461480 - 9461553
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttga 599  Q
    ||||||||| |||||||||| || ||| |  |||||| ||||||||| ||| |||||||| ||||||||||||||    
T  9461480 aaattgattctgactaaaat-gaattgcaactaaagtgatttgtgtttggatacattcatataaaagtgagttga 9461553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 537 - 627
Target Start/End: Complemental strand, 18123358 - 18123268
Alignment:
Q  537 actaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaatt 627  Q
    ||||||| ||| ||||||||||| | ||||||||| | | | ||| ||||||||||||||||| | |||| ||| |  |||||||||||||    
T  18123358 actaaaagtgaattgaaggtaaaatgatttgtgttggaatatatttatgtaaaagtgagttgaactataactttaaacgtaaaaatcaatt 18123268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 632
Target Start/End: Original strand, 36447690 - 36447796
Alignment:
Q  526 aattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaa 625  Q
    ||||||||  |||||||| |||||||||  |||| | |||||||||  || ||||| ||||| || ||||||||  ||||||||||| | ||||| ||||    
T  36447690 aattgattccgactaaaagtgagttgaatataaaatgatttgtgtttagatacatttatgtataactgagttgaataataaatttgattctaaaactcaa 36447789  T
Q  626 ttctaga 632  Q
    || ||||    
T  36447790 ttgtaga 36447796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 577 - 623
Target Start/End: Original strand, 37158671 - 37158717
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatc 623  Q
    ||||||| || || ||||||||| |||||||||||||||||||||||    
T  37158671 acattcacgtgaaggtgagttgaacaataaatttgagtgtaaaaatc 37158717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 697 - 742
Target Start/End: Complemental strand, 4554288 - 4554243
Alignment:
Q  697 aaaatcaattctacatctctagaatcaattttggctcctccaaaat 742  Q
    |||||||||| |||| ||||||||||||||| ||||| ||||||||    
T  4554288 aaaatcaattttacacctctagaatcaatttaggctcatccaaaat 4554243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 673
Target Start/End: Complemental strand, 4554399 - 4554330
Alignment:
Q  605 aaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattct 673  Q
    |||||||||| |||||||||||| ||| || | |||||  ||||||| |||||||| |||||||||||||    
T  4554399 aaatttgagtataaaaatcaattttagtatcaaaagctcaaatttcttgcttcaagatagaatcaattct 4554330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 687 - 740
Target Start/End: Complemental strand, 8027750 - 8027697
Alignment:
Q  687 caaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaa 740  Q
    ||||||| | ||||||||||||| ||||||| ||||||||||| ||| ||||||    
T  8027750 caaacatttcaaaatcaattctatatctctataatcaattttgcctcttccaaa 8027697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 686 - 727
Target Start/End: Complemental strand, 8252762 - 8252721
Alignment:
Q  686 ccaaacatgttaaaatcaattctacatctctagaatcaattt 727  Q
    |||||||||| ||||||| ||||||| |||||||||||||||    
T  8252762 ccaaacatgtcaaaatcagttctacacctctagaatcaattt 8252721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 639
Target Start/End: Original strand, 39648163 - 39648196
Alignment:
Q  606 aatttgagtgtaaaaatcaattctagaattagaa 639  Q
    ||||||||||||||||||||||||||||| ||||    
T  39648163 aatttgagtgtaaaaatcaattctagaatcagaa 39648196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 671
Target Start/End: Original strand, 44141052 - 44141137
Alignment:
Q  586 taaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||| ||||||| | ||||| ||  |||| |||||||| |||||||| | || |||||| | ||| ||||||||||||||||||    
T  44141052 taaaagcgagttgaactataaaattatgtgtgaaaatcaactctagaatcaaaaactacaaatcctaacttcaagtagaatcaatt 44141137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 525 - 673
Target Start/End: Original strand, 14055 - 14202
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| |  ||| |||||||||||||||||||| |||| |||| ||| |||||||||| ||||||||||||  |||||||||||||||||||||||    
T  14055 aaattgattcttgctacaattgagttgaaggtaaagtgatttatgtttggatacattcatgtgaaagtgagttgaaaaataaatttgagtgtaaaaatca 14154  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||| | ||||||  ||| ||||||||||||||||||||||||    
T  14155 attctagaatcataagcta-gattgctagcttcaagtagaatcaattct 14202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 1e-34; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 525 - 667
Target Start/End: Complemental strand, 36640082 - 36639939
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttg-tgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatc 623  Q
    ||||||||||| ||||||||| ||||||||||||||  ||||  ||||  || |  |||||||||||||||| ||| || |||||||||||||||||| |    
T  36640082 aaattgattatcactaaaatttagttgaaggtaaagggattttatgttttgataggttcatgtaaaagtgaggtgaacattaaatttgagtgtaaaaaac 36639983  T
Q  624 aattctagaattagaagctacaatttctagcttcaagtagaatc 667  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  36639982 aattctagaattagaagctacaatttccagcttcaagtagaatc 36639939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 489 - 674
Target Start/End: Original strand, 34250259 - 34250441
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaa 588  Q
    ||||| ||||| ||||||||||  || ||||||||| |||||||| |||||| ||||||||||||| |||||| |||| |||| ||| ||||||||  ||    
T  34250259 tgtttagttctacggtgagaaaaattgattttgagtgaattgattttgactataattgagttgaagctaaagtgatttatgtttggaaacattcat-aaa 34250357  T
Q  589 aagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    |||| |||||| ||| ||||||  |||| |||| ||||| |||||| | ||||||||||||||||| |||||||||||||||||||    
T  34250358 aagtaagttgaacaaaaaattt--gtgtgaaaaacaattgtagaatcaaaagctacaatttctagcatcaagtagaatcaattcta 34250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 577 - 738
Target Start/End: Original strand, 3043014 - 3043176
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattctac 675  Q
    |||||||||||||||||  |||| | |||| ||||| | ||||||||||||||||||||  || || ||||||||||||||| | ||||||||||||||     
T  3043014 acattcatgtaaaagtggtttgaaccataactttgaatataaaaatcaattctagaattgaaaactccaatttctagcttcatgttagaatcaattctat 3043113  T
Q  676 tttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctcca 738  Q
    | |  || ||| |||||||| ||||||||||||||| |||||||||||||||||  |||||||    
T  3043114 tcttaagcaactaaacatgtcaaaatcaattctacacctctagaatcaattttgattcctcca 3043176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 727
Target Start/End: Complemental strand, 39097366 - 39097188
Alignment:
Q  549 ttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatt 648  Q
    ||||| |||||||  ||||||||  ||  |||| ||||||||||  ||||| |  |||||||  |||| |||||||||| || ||||| ||| ||||| |    
T  39097366 ttgaatgtaaagtggtttgtgttttgattcatttatgtaaaagtaggttgaactttaaatttatgtgtgaaaatcaattatataattaaaagttacaaat 39097267  T
Q  649 tctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattt 727  Q
    | ||||||||||||||||||||||||| | | |  |||||||||||| ||||||||||||||| ||||| |||||||||    
T  39097266 tttagcttcaagtagaatcaattctacctgaaaccaaccaaacatgtcaaaatcaattctacacctctataatcaattt 39097188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 528 - 674
Target Start/End: Original strand, 35138967 - 35139121
Alignment:
Q  528 ttgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg--------taaa 619  Q
    |||||| || |||||||||||||||||||||| | |||| ||||| || |||||||| | |||||||||||| |||||||||||||||         |||    
T  35138967 ttgattctgtctaaaattgagttgaaggtaaaatgatttatgttcagatacattcatatgaaagtgagttgaacaataaatttgagtggaaaaaaaaaaa 35139066  T
Q  620 aatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    |||||||||||| || |||| |||  ||||||||||||||||| |||||||||||    
T  35139067 aatcaattctaggataagaacctatgatttctagcttcaagtaaaatcaattcta 35139121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 516 - 729
Target Start/End: Complemental strand, 18637436 - 18637224
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgt-aaaagtgagttgaccaataaatttgagt 614  Q
    ||||||||| |||||||| | ||||||| ||||||||  ||| ||| ||||||||| ||| | |||| | | |||| |||||||| | |||||| ||  |    
T  18637436 attttgagtgaattgattctaactaaaagtgagttgagagtacagtgatttgtgtttggatagattctttttaaaattgagttgaactataaatgtg--t 18637339  T
Q  615 gtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatct 714  Q
    |||||||||||||||||||| | |||||||   |  ||||||||||| ||||||||||||||| | || ||||||||||||   |||||||| | || ||    
T  18637338 gtaaaaatcaattctagaatcaaaagctacttatcttagcttcaagtggaatcaattctacttgaaagcaaccaaacatgtaggaatcaattgttcacct 18637239  T
Q  715 ctagaatcaattttg 729  Q
     ||||||||||||||    
T  18637238 ttagaatcaattttg 18637224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 653
Target Start/End: Complemental strand, 15368625 - 15368489
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||| |||||||| || || ||||||||||||||| || || |||| |||| | | |||| ||||||||||||| |||| ||| | |||||||||    
T  15368625 attttgagtgaattgattctggctgaaattgagttgaagggaa-gtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtg 15368527  T
Q  616 taaaaatcaattctagaattagaagctacaatttctag 653  Q
    |||| ||||||| |||||| ||||||||||| ||||||    
T  15368526 taaagatcaattatagaatcagaagctacaacttctag 15368489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 579 - 674
Target Start/End: Complemental strand, 42858198 - 42858103
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    ||||||||||||||||||||| | ||||||||| |||| |||||||||| |||||||| ||||| ||| | ||| ||||||||| |||||||||||    
T  42858198 attcatgtaaaagtgagttgaactataaatttgtgtgtgaaaatcaattatagaattaaaagctccaaatcctaacttcaagtaaaatcaattcta 42858103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 519 - 652
Target Start/End: Original strand, 15873924 - 15874056
Alignment:
Q  519 ttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaa 618  Q
    ||||||||||||||| || | |||||||||||||||||| | || ||| |||| ||| | | |||||||||||||| || | |||||| | | |||||||    
T  15873924 ttgagtaaattgattctggcaaaaattgagttgaaggtataatagtttatgtttggatatactcatgtaaaagtgaatttaacaataactct-agtgtaa 15874022  T
Q  619 aaatcaattctagaattagaagctacaatttcta 652  Q
    ||| |||||||||||| | |||||||||||||||    
T  15874023 aaagcaattctagaatcaaaagctacaatttcta 15874056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 681 - 741
Target Start/End: Complemental strand, 15368213 - 15368153
Alignment:
Q  681 aggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  15368213 aggaaccatacatgtcaaaatcaattctacatatctagaatcaattttggctcctccaaaa 15368153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 578 - 671
Target Start/End: Complemental strand, 9818826 - 9818732
Alignment:
Q  578 cattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaa-tcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||| |||||||||||||| | ||||||||| || |||||| ||||||||||||| | ||||||||| |  |||||||||||||||||||||    
T  9818826 cattcatataaaagtgagttgaactataaatttgtgtttaaaaaatcaattctagaatcaaaagctacaaatcatagcttcaagtagaatcaatt 9818732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 539 - 671
Target Start/End: Complemental strand, 31906389 - 31906257
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattaga 638  Q
    |||||||||||| |||||||| |||||||| ||||||   ||||||||||||||||||||| | ||||||||   || ||| ||||||| || ||| | |    
T  31906389 taaaattgagttaaaggtaaaataatttgttttcggatgaattcatgtaaaagtgagttgaactataaatttatatgaaaatatcaattatataatcaaa 31906290  T
Q  639 agctacaatttctagcttcaagtagaatcaatt 671  Q
    || ||||| |  |||||||||||| ||||||||    
T  31906289 agttacaaatcatagcttcaagtaaaatcaatt 31906257  T

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Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 671
Target Start/End: Original strand, 18851078 - 18851169
Alignment:
Q  580 ttcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||||||||| | | |||||| || |||| ||||||||||||| ||| | ||||||||| |  |||||||||||||||||||||    
T  18851078 ttcatgtaaaagtgagtttaactataaatatgtgtgtgaaaatcaattctataatcaaaagctacaaatcatagcttcaagtagaatcaatt 18851169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 673
Target Start/End: Complemental strand, 33608594 - 33608499
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattct 673  Q
    ||||||||||||||||||||| | || ||||| | |||||||||| |||||||||| | || || ||| ||||||||||||| |||||||||||||    
T  33608594 attcatgtaaaagtgagttgaactatgaatttaactgtaaaaatccattctagaatgaaaaactccaacttctagcttcaagttagaatcaattct 33608499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 742
Target Start/End: Original strand, 2937912 - 2938069
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctact 676  Q
    |||||| ||||||||| |||||| || ||||||||| | |||||||||||| |||||||| ||||| ||| |||||| ||||         |||||||||    
T  2937912 acattcgtgtaaaagtaagttgaacattaaatttgaatttaaaaatcaattatagaattaaaagcttcaaattctaggttca---------aattctact 2938002  T
Q  677 ttataggaaccaaacatgttaaaatcaa-ttctacatctctagaatcaattttggctcctccaaaat 742  Q
      | || || || |||||| |||||||| || |||  ||||||||||||||||||||||||||||||    
T  2938003 agagagtaatcatacatgtcaaaatcaatttttactcctctagaatcaattttggctcctccaaaat 2938069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 537 - 671
Target Start/End: Original strand, 6951258 - 6951392
Alignment:
Q  537 actaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaatta 636  Q
    ||||||| ||||| ||| ||||| | | |||| || ||| | |||||||||||||||| ||||   ||||||||  ||||| ||||||||| |||||| |    
T  6951258 actaaaagtgagtcgaaagtaaaatgacttgtatttggataaattcatgtaaaagtgaattgaattataaatttatgtgtacaaatcaattatagaatca 6951357  T
Q  637 gaagctacaatttctagcttcaagtagaatcaatt 671  Q
     ||||||||| | ||| ||||||||||||||||||    
T  6951358 aaagctacaaatcctaacttcaagtagaatcaatt 6951392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 671
Target Start/End: Complemental strand, 38845550 - 38845441
Alignment:
Q  563 atttgtgttcggacacattcatgtaaaa-gtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt 661  Q
    ||||||||| ||| | |||||||||||| ||||||| | | ||| ||||| |||| ||||||||||||||||| | || |||||| |  |||||||||||    
T  38845550 atttgtgtttggatatattcatgtaaaaagtgagtttaactatatatttgtgtgtgaaaatcaattctagaatcaaaaactacaaatcttagcttcaagt 38845451  T
Q  662 agaatcaatt 671  Q
    ||||||||||    
T  38845450 agaatcaatt 38845441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 601 - 661
Target Start/End: Original strand, 24306113 - 24306173
Alignment:
Q  601 caataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt 661  Q
    ||||||||||||||||||||||||||| |||||| | ||| ||||||||||| ||||||||    
T  24306113 caataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaagt 24306173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 601 - 661
Target Start/End: Complemental strand, 24367203 - 24367143
Alignment:
Q  601 caataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt 661  Q
    ||||||||||||||||||||||||||| |||||| | ||| ||||||||||| ||||||||    
T  24367203 caataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaagt 24367143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 607 - 667
Target Start/End: Complemental strand, 32693720 - 32693660
Alignment:
Q  607 atttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatc 667  Q
    ||||||||||||| |||||||||||||||| ||| |||| ||||||||| |||||||||||    
T  32693720 atttgagtgtaaacatcaattctagaattaaaagttacattttctagctccaagtagaatc 32693660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 627
Target Start/End: Complemental strand, 10898810 - 10898763
Alignment:
Q  580 ttcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaatt 627  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10898810 ttcatgtaaaagtgagttgaacaataaatttgtgtgtaaaaatcaatt 10898763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 603 - 671
Target Start/End: Original strand, 11132804 - 11132873
Alignment:
Q  603 ataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaatt 671  Q
    |||| |||||||||||| |||||||||| ||| | |||||||||||| |||||||||| |||||||||||    
T  11132804 ataattttgagtgtaaatatcaattctacaataaaaagctacaatttgtagcttcaagttagaatcaatt 11132873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 651 - 732
Target Start/End: Complemental strand, 25548518 - 25548437
Alignment:
Q  651 tagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggct 732  Q
    ||||||||||||||||||||| ||||| | || || ||||||||| | |||||||||||||  || | ||||||||||||||    
T  25548518 tagcttcaagtagaatcaattttacttaaaagcaatcaaacatgtcataatcaattctacacatccacaatcaattttggct 25548437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 628
Target Start/End: Complemental strand, 34443116 - 34443016
Alignment:
Q  528 ttgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaatt 627  Q
    ||||||||||||||||||  |||||| ||||| |||||| |||| | | ||||| || ||||||||| ||||  ||||||||||  ||| ||||||||||    
T  34443116 ttgattatgactaaaattaggttgaaagtaaaataatttatgtttgaatacatttatataaaagtgaattgaaaaataaatttgtttgttaaaatcaatt 34443017  T
Q  628 c 628  Q
    |    
T  34443016 c 34443016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 686 - 741
Target Start/End: Complemental strand, 28973823 - 28973768
Alignment:
Q  686 ccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||| | |||||||||||||||  |||||||||||||| |||||||||||||    
T  28973823 ccaaacatatcaaaatcaattctacacatctagaatcaatttaggctcctccaaaa 28973768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 634
Target Start/End: Original strand, 8506690 - 8506756
Alignment:
Q  568 tgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaat 634  Q
    |||| ||||| ||| |||||||||||| |||| |||||||| ||||||||||| |||||| ||||||    
T  8506690 tgtttggacaaatttatgtaaaagtgatttgaacaataaatgtgagtgtaaaactcaattttagaat 8506756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 631
Target Start/End: Complemental strand, 8591573 - 8591519
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctag 631  Q
    |||||| | |||||||||||||| ||| ||||||||||| |||||||||||||||    
T  8591573 acattcctataaaagtgagttgaacaacaaatttgagtgaaaaaatcaattctag 8591519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 664 - 742
Target Start/End: Original strand, 11911907 - 11911985
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaat 742  Q
    ||||||||||||||||    ||| ||||| || |||||||||| |||||||||||||||||||||| | || |||||||    
T  11911907 aatcaattctactttaacacaactaaacaagtcaaaatcaattttacatctctagaatcaattttgaccccaccaaaat 11911985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 686 - 728
Target Start/End: Original strand, 13224738 - 13224780
Alignment:
Q  686 ccaaacatgttaaaatcaattctacatctctagaatcaatttt 728  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  13224738 ccaaacatgtcaaaatcaattatacatctctagaatcaatttt 13224780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 651 - 728
Target Start/End: Complemental strand, 23647642 - 23647564
Alignment:
Q  651 tagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctac-atctctagaatcaatttt 728  Q
    ||||||||||||||||||||| ||||||| |  | ||||||||  ||||||||||||||| | ||||| ||||||||||    
T  23647642 tagcttcaagtagaatcaattttactttacatcatccaaacattataaaatcaattctacgacctctacaatcaatttt 23647564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 651 - 728
Target Start/End: Original strand, 23810931 - 23811009
Alignment:
Q  651 tagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctac-atctctagaatcaatttt 728  Q
    ||||||||||||||||||||| ||||||| |  | ||||||||  ||||||||||||||| | ||||| ||||||||||    
T  23810931 tagcttcaagtagaatcaattttactttacatcatccaaacattataaaatcaattctacgacctctacaatcaatttt 23811009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 620
Target Start/End: Complemental strand, 4306638 - 4306561
Alignment:
Q  543 attgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaa 620  Q
    ||||||||||| ||||| | |||| |||| ||| ||||||||||||||  || |||| |||||||||| |||||||||    
T  4306638 attgagttgaatgtaaaatgatttatgtttggatacattcatgtaaaaaagaattgaacaataaatttaagtgtaaaa 4306561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 666
Target Start/End: Complemental strand, 8121596 - 8121547
Alignment:
Q  617 aaaaatcaattctagaattagaagctacaatttctagcttcaagtagaat 666  Q
    ||||||||| |||||||| ||||||||||||||||| ||| |||||||||    
T  8121596 aaaaatcaactctagaatcagaagctacaatttctaactttaagtagaat 8121547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 741
Target Start/End: Complemental strand, 10898689 - 10898632
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||| ||||| ||||| ||| |||||||||||||||||  ||||||||||    
T  10898689 aaccaaacatgtcaaaattaattcgacagctctagaatcaattttgattcctccaaaa 10898632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 670
Target Start/End: Original strand, 22226229 - 22226322
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaat 670  Q
    ||||| |||||||||| ||| || |  |||||||| |||||||| | ||||||| ||| | ||||||||| | ||| |||||||||||||||||    
T  22226229 acattaatgtaaaagttagtcgaactctaaatttgtgtgtaaaagttaattctaaaatcaaaagctacaaatactatcttcaagtagaatcaat 22226322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 741
Target Start/End: Complemental strand, 29922861 - 29922804
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||| |||||||||||||||   ||||||||||||||| |||||| ||||    
T  29922861 aaccaaacatgtcaaaatcaattctacactactagaatcaattttgactcctcaaaaa 29922804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 673
Target Start/End: Original strand, 42439618 - 42439707
Alignment:
Q  585 gtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattct 673  Q
    ||||||||||||||| | ||||| || |||||||||||||  | |||| | | ||||||||  ||||||||||||| |||||||||||||    
T  42439618 gtaaaagtgagttgaacgataaaatttagtgtaaaaatcacgtttagactcaaaagctacagattctagcttcaagttagaatcaattct 42439707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 624
Target Start/End: Complemental strand, 7925467 - 7925431
Alignment:
Q  588 aaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||||||||||| ||||||||||||||||||||||||    
T  7925467 aaagtgagttgaacaataaatttgagtgtaaaaatca 7925431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 577 - 673
Target Start/End: Complemental strand, 32980635 - 32980539
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||||||||| | | || |||||||||||| ||||||||||| || |||||| | ||| || || |  || ||||||||| ||||||||||    
T  32980635 acattcatgtaaaagtaactcgagcaataaatttgaatgtaaaaatcatttgtagaatcaaaagatataaatcttaacttcaagtaaaatcaattct 32980539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 587 - 706
Target Start/End: Complemental strand, 38592294 - 38592175
Alignment:
Q  587 aaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt-agaatcaattctactttataggaa 685  Q
    ||||||||||| | |||||| |||| ||||||||||||  | |||| | | ||||||||| |||| ||||||| | |||||||||||||||| | || ||    
T  38592294 aaaagtgagttcaacaataactttg-gtgtaaaaatcacatttagactcaaaagctacaaattctggcttcaaattagaatcaattctacttgagagcaa 38592196  T
Q  686 ccaaacatgttaaaatcaatt 706  Q
    |||||||| | || |||||||    
T  38592195 ccaaacatatcaatatcaatt 38592175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 117439 - 117526
Alignment:
Q  527 attgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagt 614  Q
    ||||||| |||||| || ||||||||||||||| | |||  |||| ||| ||||  ||||||||||||||| | ||||| ||||||||    
T  117439 attgattctgactagaagtgagttgaaggtaaaatgattcatgtttggatacatctatgtaaaagtgagttaaacaatacatttgagt 117526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 727
Target Start/End: Original strand, 16294000 - 16294043
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattt 727  Q
    ||||||||||||||||||||||||||||  |||| |||||||||    
T  16294000 aaccaaacatgttaaaatcaattctacacttctataatcaattt 16294043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 596
Target Start/End: Original strand, 36927592 - 36927699
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaa 588  Q
    ||||||||| |||  |||||||  || ||||||| | |||||||| ||||| || | ||| ||| |||||||| |||| |||| ||| |||||| |||||    
T  36927592 tgtttggttttgcattgagaaaaattgattttgactgaattgattctgactgaattagagatgatggtaaagtgatttatgtttggatacattcctgtaa 36927691  T
Q  589 aagtgagt 596  Q
    ||||||||    
T  36927692 aagtgagt 36927699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 627
Target Start/End: Complemental strand, 38587219 - 38587128
Alignment:
Q  536 gactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaatt 627  Q
    |||||||| | ||||||||||||| |||||||| || | |||  ||  |||||||||||  |||  |||||||||| |||||||||||||||    
T  38587219 gactaaaagtaagttgaaggtaaaataatttgtatttgaacatttttgtgtaaaagtgatctgaataataaatttgtgtgtaaaaatcaatt 38587128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 697 - 743
Target Start/End: Original strand, 10860202 - 10860248
Alignment:
Q  697 aaaatcaattctacatctctagaatcaattttggctcctccaaaatg 743  Q
    ||||||||||||||||||||| ||||||||||| ||| | |||||||    
T  10860202 aaaatcaattctacatctctaaaatcaattttgcctcttacaaaatg 10860248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 686 - 728
Target Start/End: Complemental strand, 14670983 - 14670941
Alignment:
Q  686 ccaaacatgttaaaatcaattctacatctctagaatcaatttt 728  Q
    |||||||||||||||||||||||| | |||| |||||||||||    
T  14670983 ccaaacatgttaaaatcaattctatacctcttgaatcaatttt 14670941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 673
Target Start/End: Original strand, 3970361 - 3970490
Alignment:
Q  545 tgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctac 644  Q
    |||||||||  |||||| ||| ||||| ||| ||||   ||||||||||| |||| || ||| ||| | |||||||||||| | | || | | |||||||    
T  3970361 tgagttgaatataaagtgattcgtgttaggatacatatctgtaaaagtgaattgaacagtaattttaaatgtaaaaatcaagtttggagtcaaaagctac 3970460  T
Q  645 aatttctagcttca-agtagaatcaattct 673  Q
    |||| ||||||||| | |||||||||||||    
T  3970461 aattcctagcttcagattagaatcaattct 3970490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 598
Target Start/End: Complemental strand, 14671168 - 14671096
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttg 598  Q
    |||||||||||| |||||| ||| ||||| || ||||| ||| |||| |||  |||||||||||||||||||||    
T  14671168 aaattgattatggctaaaagtgaattgaatgtgaagta-tttatgtttggatgcattcatgtaaaagtgagttg 14671096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 4e-34; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 539 - 673
Target Start/End: Complemental strand, 29904362 - 29904228
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattaga 638  Q
    ||||||||||||||| || ||||||||| ||||  || | ||||| |||| ||||| |||| ||||||||||||||||||| |||| |||||||||||||    
T  29904362 taaaattgagttgaatgtgaagtaatttatgttatgatatattcaagtaatagtgaattgaacaataaatttgagtgtaaacatcagttctagaattaga 29904263  T
Q  639 agctacaatttctagcttcaagtagaatcaattct 673  Q
    ||||||||||||| |||| ||||||||||||||||    
T  29904262 agctacaatttcttgctttaagtagaatcaattct 29904228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 539 - 673
Target Start/End: Original strand, 55927725 - 55927859
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattaga 638  Q
    ||||||||||||| || ||| || |||| |||| ||| |||||||||||||||||| |||| |||||||||||||||| |  |||||||||||||| |||    
T  55927725 taaaattgagttggagttaatgtgatttatgtttggatacattcatgtaaaagtgacttgaacaataaatttgagtgtgacgatcaattctagaatcaga 55927824  T
Q  639 agctacaatttctagcttcaagtagaatcaattct 673  Q
    ||||||||||| |||| |||||| |||||||||||    
T  55927825 agctacaatttttagcctcaagtggaatcaattct 55927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 566 - 673
Target Start/End: Original strand, 32818352 - 32818459
Alignment:
Q  566 tgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaa 665  Q
    |||||| ||| |||||||||||||||| |||||| | ||||||||| ||| |||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  32818352 tgtgtttggatacattcatgtaaaagttagttgaactataaatttgtgtgcaaaaatcaattctagaatcaaaagctacaaattctagcttcaaatagaa 32818451  T
Q  666 tcaattct 673  Q
    ||||||||    
T  32818452 tcaattct 32818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 516 - 671
Target Start/End: Complemental strand, 37439295 - 37439143
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||| |||||| ||||   | ||  | ||||| |||  |||||| ||||||| |||||||    
T  37439295 attttgagttaattgatt-tgactaaaattgaattgaaggtaaaataatttatgtttaaatactattatgtataag--agttgaacaataaaattgagtg 37439199  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||| ||| ||||    
T  37439198 taaaaatcaattatagaattaaaagctataatttctagcttcaagtataataaatt 37439143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 556 - 671
Target Start/End: Complemental strand, 35065176 - 35065061
Alignment:
Q  556 taaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagct 655  Q
    |||||| ||||||||| ||| |||||||||||||||||||| ||   ||||||||| |||||||||||||||||||||| | |||  |||| | ||||||    
T  35065176 taaagtgatttgtgtttggatacattcatgtaaaagtgagtggagatataaatttgtgtgtaaaaatcaattctagaatcaaaagtcacaaatactagct 35065077  T
Q  656 tcaagtagaatcaatt 671  Q
    ||||||| ||||||||    
T  35065076 tcaagtaaaatcaatt 35065061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 525 - 650
Target Start/End: Complemental strand, 4243532 - 4243406
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttc-ggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatc 623  Q
    |||||||||  |||||||| | || || ||||||||| |||| ||||  ||| ||||| |||||||||||||| || |||||||||||||||||||||||    
T  4243532 aaattgattccgactaaaagtaagatgtaggtaaagtgatttttgttttggagacattgatgtaaaagtgagtagaacaataaatttgagtgtaaaaatc 4243433  T
Q  624 aattctagaattagaagctacaatttc 650  Q
    ||||||||||| | ||||| |||||||    
T  4243432 aattctagaatcaaaagctccaatttc 4243406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 525 - 670
Target Start/End: Complemental strand, 22250370 - 22250225
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    |||||||||||||||||||  |||||||| || |||| ||||   || ||| |||||||||||||||||| | || |||||||||||||| | |||| ||    
T  22250370 aaattgattatgactaaaagcgagttgaatgtgaagtgatttacatttggatacattcatgtaaaagtgaatcgaacaataaatttgagtattaaaagca 22250271  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaatcaat 670  Q
    |||  ||||| | ||||| |||||||| ||||||||||||| ||||    
T  22250270 atttcagaatcaaaagcttcaatttcttgcttcaagtagaaccaat 22250225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 516 - 671
Target Start/End: Original strand, 8604551 - 8604709
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaa---ggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttga 612  Q
    ||||||||  ||||||||  ||| |||||| |||||||   |||||||| |||| |||| ||| |||||||||||||||||  || | | |||||||||     
T  8604551 attttgagagaattgattccgaccaaaatttagttgaaaaaggtaaagtgatttatgtttggatacattcatgtaaaagtgcattcaactataaatttgt 8604650  T
Q  613 gtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||| |||||||||||||||||   ||||||||| |  |||||||||||||||||||||    
T  8604651 gtgtgaaaatcaattctagaatcgaaagctacaaatcttagcttcaagtagaatcaatt 8604709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 659
Target Start/End: Complemental strand, 33844120 - 33843987
Alignment:
Q  527 attgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacat--tcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||| || ||||||| |||||||| ||||| | ||||||||| ||| | ||  |||||||||| | |||||| |||||||||||||||| |||||||    
T  33844120 attgattttggctaaaat-gagttgaatgtaaaattatttgtgtttggagagatattcatgtaaaaataagttgaacaataaatttgagtgttaaaatca 33844022  T
Q  625 attctagaattagaagctacaatttctagcttcaa 659  Q
    ||| |||||| | ||||| ||||||||||||||||    
T  33844021 attttagaatcaaaagctccaatttctagcttcaa 33843987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 671
Target Start/End: Complemental strand, 9064323 - 9064229
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||| ||||||||||||||||| |  |||| |||||||| ||||||||||||||||| | || |||||| |||||| |||||||||||||||||    
T  9064323 acatttatgtaaaagtgagttgaaccgtaaacttgagtgtgaaaatcaattctagaatcaaaaactacaaattctagtttcaagtagaatcaatt 9064229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 577 - 669
Target Start/End: Complemental strand, 10185286 - 10185193
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaa 669  Q
    ||||| ||||||||||||||| | ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||| ||||||| |||||||||    
T  10185286 acattaatgtaaaagtgagttaaacaataaatttgagtgtaaagatcaattttagaatcaaaagcttcaatttctaccttcaagttagaatcaa 10185193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 519 - 667
Target Start/End: Original strand, 20712749 - 20712897
Alignment:
Q  519 ttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaa 618  Q
    |||||| ||||||||  |||||||| ||||||||||||||||| ||||||||| ||| ||| |||||||    |||| ||| | | ||| ||| |||| |    
T  20712749 ttgagtgaattgattccgactaaaaatgagttgaaggtaaagttatttgtgtttggatacaatcatgtagcgatgagctgaactacaaaattgtgtgtga 20712848  T
Q  619 aaatcaattctagaattagaagctacaatttctagcttcaagtagaatc 667  Q
    |||||||||||  ||| | || |||||| || |||||||||||||||||    
T  20712849 aaatcaattcttcaataaaaaactacaaattttagcttcaagtagaatc 20712897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 667
Target Start/End: Complemental strand, 16552047 - 16551959
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatc 667  Q
    ||||||||||||||||||||||| | ||||||||| |||  |||||||||||||||| || || |||||| | ||||||||||| ||||||    
T  16552047 acattcatgtaaaagtgagttgaactataaatttgtgtg--aaaatcaattctagaactaaaaactacaaatcctagcttcaaggagaatc 16551959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 21691186 - 21691301
Alignment:
Q  558 aagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttc 657  Q
    |||| ||||||||| ||| | ||||||||||||||| ||||| | ||||||||| |||| ||||||||||||| ||  | ||||||||| |  ||| |||    
T  21691186 aagtgatttgtgtttggatatattcatgtaaaagtgtgttgaactataaatttgtgtgtgaaaatcaattctacaaccaaaagctacaaatcttagtttc 21691285  T
Q  658 aagtagaatcaattct 673  Q
    |||| |||||||||||    
T  21691286 aagttgaatcaattct 21691301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 670
Target Start/End: Complemental strand, 1048784 - 1048716
Alignment:
Q  602 aataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaat 670  Q
    ||||||||||||||||| |||||||| |||||||| |||||| || ||||| ||| |||||||||||||    
T  1048784 aataaatttgagtgtaagaatcaattatagaattaaaagctataaattctaactttaagtagaatcaat 1048716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 539 - 671
Target Start/End: Complemental strand, 47144344 - 47144213
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattaga 638  Q
    |||||||||||||||| || | | |||| |||| ||| |||||||| ||||||| |||||  |||||||||| || ||||||||||||| |||||| | |    
T  47144344 taaaattgagttgaagatatattgatttatgtttggatacattcatctaaaagttagttggacaataaattttagcgtaaaaatcaattatagaatcata 47144245  T
Q  639 agctacaatttctagcttcaagtagaatcaatt 671  Q
    | ||| ||||| || |||||| | |||||||||    
T  47144244 aacta-aatttttaacttcaaattgaatcaatt 47144213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 706
Target Start/End: Complemental strand, 1616495 - 1616354
Alignment:
Q  564 tttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtag 663  Q
    |||||||| | | |||||||||||||| |||||||| |  ||||  || ||||   ||||||||||||||| | ||||||||| || |||||| ||||||    
T  1616495 tttgtgtttgaatacattcatgtaaaaatgagttgaactttaaacatgtgtgtgggaatcaattctagaatcaaaagctacaaattgtagctt-aagtag 1616397  T
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaatt 706  Q
    |||||||||||||  |||  |||||| ||||| | ||||||||    
T  1616396 aatcaattctactcgataacaaccaatcatgtcagaatcaatt 1616354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 625
Target Start/End: Complemental strand, 32100378 - 32100336
Alignment:
Q  583 atgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaa 625  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  32100378 atgtaaaagtgagttgaacaataaatttgagtgtaaaaatcaa 32100336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 634
Target Start/End: Original strand, 41751204 - 41751322
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||| |||| ||| ||  ||||| |||||| ||| |||||| |||  |||| | | |||||||||||||| ||| || | |||||||||| |||     
T  41751204 attttgagtgaatttattttgtttaaaagtgagttcaagataaagtgattaatgtttgaatacattcatgtaaaactgaattaaacaataaatttaagtt 41751303  T
Q  616 taaaaatcaattctagaat 634  Q
    |||||||||||||||||||    
T  41751304 taaaaatcaattctagaat 41751322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 687 - 741
Target Start/End: Complemental strand, 43076027 - 43075973
Alignment:
Q  687 caaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||| ||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  43076027 caaatatgttaaaatcaattctgcacctctagaatcaattttgcctcctccaaaa 43075973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 741
Target Start/End: Complemental strand, 1099803 - 1099746
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||| || | |||||||||||| |||||||||||||||||||| |||||||||||    
T  1099803 aaccaaatatttcaaaatcaattctgcatctctagaatcaattttgtctcctccaaaa 1099746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 603 - 671
Target Start/End: Original strand, 2206362 - 2206431
Alignment:
Q  603 ataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaatt 671  Q
    ||||||||||||| |||||||||| ||||||| | ||||| |||||| |||||||||| |||||||||||    
T  2206362 ataaatttgagtgcaaaaatcaatcctagaatcaaaagctccaatttttagcttcaagctagaatcaatt 2206431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 539 - 624
Target Start/End: Complemental strand, 22683994 - 22683909
Alignment:
Q  539 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||| ||||||||| ||||| |  ||| |||| ||||||||| ||||||||| ||||||| |||||||||| | |||||||||||    
T  22683994 taaaagtgagttgaaagtaaaatggtttatgtttggacacatttatgtaaaagcgagttgaacaataaatttcaatgtaaaaatca 22683909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 613 - 658
Target Start/End: Complemental strand, 43807389 - 43807344
Alignment:
Q  613 gtgtaaaaatcaattctagaattagaagctacaatttctagcttca 658  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||    
T  43807389 gtgtaaaaattaattttagaattagaagctacaatttctagcttca 43807344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 579 - 671
Target Start/End: Complemental strand, 39386723 - 39386631
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    ||||||||||||||||||||| |  ||||| || |||| |||||||||| |||||||| | | || || || |||||| ||||||||||||||    
T  39386723 attcatgtaaaagtgagttgaactttaaatatgtgtgtgaaaatcaattatagaattaaatgttataaattttagctttaagtagaatcaatt 39386631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 673
Target Start/End: Original strand, 53713538 - 53713650
Alignment:
Q  561 taatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag 660  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||| || |   |||  || |||||| |||||| | ||||||||| |  ||||||||||    
T  53713538 taatttgtgtttggacacattcatgtaaaagtgagttgaactatatatatttatgtggaagtcaattatagaatcaaaagctacaaatcgtagcttcaag 53713637  T
Q  661 tagaatcaattct 673  Q
    || ||| ||||||    
T  53713638 taaaattaattct 53713650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 525 - 592
Target Start/End: Complemental strand, 23523534 - 23523467
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagt 592  Q
    ||||||||||| | ||||| |||||| |||||||| |||| |||||||||| |||||||| |||||||    
T  23523534 aaattgattataattaaaaatgagtttaaggtaaaataatatgtgttcggatacattcatataaaagt 23523467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 603 - 674
Target Start/End: Complemental strand, 30357578 - 30357507
Alignment:
Q  603 ataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    ||||||||| ||||||||||||||| || ||| | ||||||||| |   |||||||||||||||||||||||    
T  30357578 ataaatttgtgtgtaaaaatcaattatataatcaaaagctacaaatcacagcttcaagtagaatcaattcta 30357507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 659
Target Start/End: Complemental strand, 32680842 - 32680780
Alignment:
Q  596 ttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaa 659  Q
    |||| ||||||| |||||| |||||| ||||||||||||||||||||||||||  |||||||||    
T  32680842 ttgaacaataaaattgagtttaaaaa-caattctagaattagaagctacaattgatagcttcaa 32680780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 538 - 649
Target Start/End: Original strand, 47314955 - 47315066
Alignment:
Q  538 ctaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattag 637  Q
    ||||||||||| || | ||||| | ||||  ||| |||  ||| ||||||||||| |||||   ||||||||||| ||||| ||||||||||| ||||||    
T  47314955 ctaaaattgagatgcaagtaaattgatttaggtttggatgcatacatgtaaaagtaagttggaaaataaatttgactgtaataatcaattctaaaattag 47315054  T
Q  638 aagctacaattt 649  Q
    |||||| |||||    
T  47315055 aagctataattt 47315066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 684 - 731
Target Start/End: Original strand, 49138953 - 49139000
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggc 731  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||||    
T  49138953 aaccaaacatgtcagaatcaattctacacctctagaatcaattttggc 49139000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 671
Target Start/End: Complemental strand, 2206580 - 2206515
Alignment:
Q  607 atttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaatt 671  Q
    ||||||||||||||| ||||| |||||| | |||||||||| | |||||||||| |||||||||||    
T  2206580 atttgagtgtaaaaaacaattatagaatcaaaagctacaatgtttagcttcaagttagaatcaatt 2206515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 673
Target Start/End: Complemental strand, 2635251 - 2635159
Alignment:
Q  583 atgtaaaagtgagttgacca--ataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||||||||||  |  | |||||||||| | ||||||||||||||| | | ||||| |||| |||||||||||| | ||||||||||    
T  2635251 atgtaaaagtgagttgaagaacaaaaatttgagtcttaaaatcaattctagactcaaaagctccaatctctagcttcaagcataatcaattct 2635159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 673
Target Start/End: Complemental strand, 9134700 - 9134606
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||| ||||||  | |||| | ||||||||| |||  ||||||||||||| ||| | ||||||||| || ||||||||||||| |||||||||    
T  9134700 acattcatttaaaagcaaattgagctataaatttgtgtg--aaaatcaattctaaaatcaaaagctacaaattttagcttcaagtaggatcaattct 9134606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 584
Target Start/End: Complemental strand, 29114861 - 29114804
Alignment:
Q  527 attgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcat 584  Q
    ||||||||||| ||||| |||||||||||||  |||||||||||| ||| ||||||||    
T  29114861 attgattatgattaaaagtgagttgaaggtatggtaatttgtgtttggatacattcat 29114804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 614 - 706
Target Start/End: Complemental strand, 29729040 - 29728947
Alignment:
Q  614 tgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattctactttataggaaccaaacatgttaaaatcaatt 706  Q
    |||||||||||||||| |||| | ||||| |||||| || ||||||| || |||||||||||||  | || |||||||| ||| ||||||||||    
T  29729040 tgtaaaaatcaattcttgaatcaaaagcttcaatttttaacttcaagttataatcaattctactcgagagcaaccaaacttgtcaaaatcaatt 29728947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 675
Target Start/End: Original strand, 29779108 - 29779145
Alignment:
Q  638 aagctacaatttctagcttcaagtagaatcaattctac 675  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  29779108 aagctacaaattctagcttcaagtagaatcaattctac 29779145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 571
Target Start/End: Complemental strand, 38716743 - 38716686
Alignment:
Q  514 taattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgtt 571  Q
    |||||||||||||||||||| ||||||| | ||||||| ||||||| |||||| ||||    
T  38716743 taattttgagtaaattgattctgactaagagtgagttgcaggtaaaataatttatgtt 38716686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 733
Target Start/End: Complemental strand, 45329813 - 45329764
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctc 733  Q
    |||||||||||||||| |||||| |||| ||||| |||||||||||||||    
T  45329813 aaccaaacatgttaaagtcaattttacacctctataatcaattttggctc 45329764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 687 - 728
Target Start/End: Original strand, 47179568 - 47179609
Alignment:
Q  687 caaacatgttaaaatcaattctacatctctagaatcaatttt 728  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  47179568 caaacatgttaaaatcaattatacatctctaaaatcaatttt 47179609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 621
Target Start/End: Complemental strand, 36639934 - 36639843
Alignment:
Q  529 tgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaa 621  Q
    ||||||||||| |||| ||||||||| |||||| |||| |||| ||| ||||||||||| | ||  ||||| |||||||||| ||||| ||||    
T  36639934 tgattatgacttaaat-gagttgaagataaagtgatttatgtttggatacattcatgtacaggtatgttgaacaataaatttaagtgttaaaa 36639843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 673
Target Start/End: Original strand, 55186991 - 55187051
Alignment:
Q  613 gtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||| ||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||||||    
T  55186991 gtgtgaaaatcaattctataattaaaagttacaaatcctaacttcaagtagaatcaattct 55187051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 673
Target Start/End: Original strand, 2326805 - 2326900
Alignment:
Q  578 cattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattct 673  Q
    |||||||||||| ||||||||| |  ||||| || || | | ||| ||||||||||||| ||| ||||| |||||| ||| | |||||||||||||    
T  2326805 cattcatgtaaaggtgagttgaactttaaatatgtgtttgagaattaattctagaattaaaagttacaaattctagtttcgaatagaatcaattct 2326900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 671
Target Start/End: Complemental strand, 4088959 - 4088916
Alignment:
Q  628 ctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||    
T  4088959 ctagaattagaaactacaatttttagctttaagtagaatcaatt 4088916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 661
Target Start/End: Complemental strand, 8330171 - 8330124
Alignment:
Q  614 tgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt 661  Q
    |||||||||||||| |||||| | ||||| ||||||||||||||||||    
T  8330171 tgtaaaaatcaattatagaatcaaaagctccaatttctagcttcaagt 8330124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 731
Target Start/End: Complemental strand, 35995187 - 35995148
Alignment:
Q  692 atgttaaaatcaattctacatctctagaatcaattttggc 731  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  35995187 atgtcaaaatcaattctacaactctagaatcaattttggc 35995148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 657
Target Start/End: Complemental strand, 43807543 - 43807496
Alignment:
Q  610 tgagtgtaaaaatcaattctagaattagaagctacaatttctagcttc 657  Q
    |||||||||||||||||| |||||||| ||||||| || |||||||||    
T  43807543 tgagtgtaaaaatcaattttagaattataagctacgatctctagcttc 43807496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 636
Target Start/End: Complemental strand, 45694718 - 45694647
Alignment:
Q  565 ttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaatta 636  Q
    ||||||| ||| |||||||||||||| |||||| | | |||||| || |||| | |||||||||||||||||    
T  45694718 ttgtgtttggatacattcatgtaaaaatgagttcaactataaatgtgtgtgttagaatcaattctagaatta 45694647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 582 - 733
Target Start/End: Original strand, 47314999 - 47315163
Alignment:
Q  582 catgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt-----caa--------gtagaatca 668  Q
    ||||||||||| |||||   ||||||||||| ||||| ||||||||||| |||||||||||| ||||| ||| ||     |||        ||| |||||    
T  47314999 catgtaaaagtaagttggaaaataaatttgactgtaataatcaattctaaaattagaagctataatttttagtttagaatcaattctcgaggtaaaatca 47315098  T
Q  669 attctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctc 733  Q
    |||| |||  | |||||| |||||||| |||||  |||||||| ||| |||||||||||||||||    
T  47315099 attcaactccagaggaacaaaacatgtcaaaatggattctacaactcaagaatcaattttggctc 47315163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 571
Target Start/End: Original strand, 48045684 - 48045739
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgtt 571  Q
    |||||||||||||||||| || |||||| |||||||||| |||||| |||| ||||    
T  48045684 attttgagtaaattgattctggctaaaactgagttgaagataaagtgatttatgtt 48045739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 731
Target Start/End: Original strand, 48045819 - 48045866
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggc 731  Q
    ||||||||||||   |||||||||||| ||||||||||||||||||||    
T  48045819 aaccaaacatgtccgaatcaattctacttctctagaatcaattttggc 48045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 728
Target Start/End: Original strand, 55085125 - 55085164
Alignment:
Q  689 aacatgttaaaatcaattctacatctctagaatcaatttt 728  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  55085125 aacatgttaaaatcaattctatacctctagaatcaatttt 55085164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 599
Target Start/End: Complemental strand, 2206670 - 2206596
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttga 599  Q
    ||||||||| |||| ||||||||||||||||| |||| |||| | || |||  |||| |||| ||||||||||||    
T  2206670 aaattgattctgacgaaaattgagttgaaggtgaagtgatttatttttggatgcattaatgtgaaagtgagttga 2206596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 664 - 730
Target Start/End: Complemental strand, 2635150 - 2635084
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttgg 730  Q
    ||||| |||||||| | || || ||||||||| |||||||||| ||||  |||||||||||||||||    
T  2635150 aatcagttctacttaaaagcaatcaaacatgtcaaaatcaattttacacttctagaatcaattttgg 2635084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 664 - 738
Target Start/End: Complemental strand, 20712637 - 20712563
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctcca 738  Q
    ||||||||||| || | || || ||| ||||| ||||||||||||| | ||||||||||||||||| ||| ||||    
T  20712637 aatcaattctatttgagagcaaacaagcatgtaaaaatcaattctaaacctctagaatcaattttgcctcttcca 20712563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 564 - 673
Target Start/End: Original strand, 31012718 - 31012828
Alignment:
Q  564 tttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgt-aaaaatcaattctagaattagaagctacaatttctagcttcaagta 662  Q
    |||||||| | || |||| |||||||| |||||||| | |||||| |  |||| |||||||||||||| ||||| || |||||| | |||| ||  ||||    
T  31012718 tttgtgtttgaacgcatttatgtaaaaatgagttgaactataaatatatgtgtgaaaaatcaattctaaaattaaaaactacaaatcctagttttgagta 31012817  T
Q  663 gaatcaattct 673  Q
    |||||||||||    
T  31012818 gaatcaattct 31012828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 618 - 675
Target Start/End: Original strand, 32817486 - 32817544
Alignment:
Q  618 aaaatcaattctagaattagaa-gctacaatttctagcttcaagtagaatcaattctac 675  Q
    |||||||||| ||||| || || ||||||| ||||||| ||||||||||||||||||||    
T  32817486 aaaatcaattgtagaagtaaaaagctacaaattctagcctcaagtagaatcaattctac 32817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 686 - 728
Target Start/End: Original strand, 50358134 - 50358176
Alignment:
Q  686 ccaaacatgttaaaatcaattctacatctctagaatcaatttt 728  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||    
T  50358134 ccaagcatgtcaaaatcaattctacacctctagaatcaatttt 50358176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 538 - 599
Target Start/End: Original strand, 1023872 - 1023933
Alignment:
Q  538 ctaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttga 599  Q
    |||||| ||||||||||||||||| |||| |||| ||| | ||| |||| ||||||||||||    
T  1023872 ctaaaagtgagttgaaggtaaagtgatttttgtttggatatattgatgtgaaagtgagttga 1023933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 662 - 738
Target Start/End: Complemental strand, 8330104 - 8330027
Alignment:
Q  662 agaatcaattctactttataggaaccaaacatgttaaaa-tcaattctacatctctagaatcaattttggctcctcca 738  Q
    |||||||||| ||||| | || |||||||||||| |||| | |||| | || |||||||||||||| |||||||||||    
T  8330104 agaatcaattttacttgagagcaaccaaacatgtaaaaaattaattattcacctctagaatcaattctggctcctcca 8330027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 697 - 730
Target Start/End: Original strand, 17898376 - 17898409
Alignment:
Q  697 aaaatcaattctacatctctagaatcaattttgg 730  Q
    ||||||||||||||||||||||||| ||||||||    
T  17898376 aaaatcaattctacatctctagaattaattttgg 17898409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 673
Target Start/End: Complemental strand, 18597124 - 18597035
Alignment:
Q  585 gtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattct 673  Q
    |||||||||| || | |||||| ||||| ||| |||||||||| |||||| | ||| | ||| || |||||||||| |||||||||||||    
T  18597124 gtaaaagtgaatttaacaataactttgaatgttaaaatcaattatagaatcaaaaggttcaaattatagcttcaagttagaatcaattct 18597035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 729
Target Start/End: Complemental strand, 29114742 - 29114697
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttg 729  Q
    |||| ||||||||| |||||||||||||  ||||||||||||||||    
T  29114742 aacctaacatgttagaatcaattctacacttctagaatcaattttg 29114697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 687 - 736
Target Start/End: Complemental strand, 29904196 - 29904147
Alignment:
Q  687 caaacatgttaaaatcaattctacatctctagaatcaattttggctcctc 736  Q
    ||||||||||| |||||||| || |||||||||||||||| ||| |||||    
T  29904196 caaacatgttagaatcaattttatatctctagaatcaattgtggatcctc 29904147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 646
Target Start/End: Complemental strand, 45011966 - 45011897
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaa 646  Q
    |||||||| |||||||||||  |   ||||||||| |||| ||||||||||||||||| | |||||||||    
T  45011966 acattcatataaaagtgagtaaaattataaatttgtgtgtgaaaatcaattctagaatcaaaagctacaa 45011897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 671
Target Start/End: Original strand, 50061630 - 50061715
Alignment:
Q  586 taaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||| ||||||| | ||||| ||  |||| |||||||| |||||||| | || |||||| | ||| ||||||||||||||||||    
T  50061630 taaaagcgagttgaaccataaaattatgtgtgaaaatcaactctagaatcaaaaactacaaatcctaacttcaagtagaatcaatt 50061715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 2e-33; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 517 - 671
Target Start/End: Original strand, 1976797 - 1976952
Alignment:
Q  517 ttttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgt 616  Q
    |||||||| |||||||| || ||| |||||||||||||||||||  | || |||| ||| ||||||||||||||||||||| | ||||||||||||||||    
T  1976797 ttttgagtgaattgattctggctagaattgagttgaaggtaaagcgacttatgtttggatacattcatgtaaaagtgagttcaacaataaatttgagtgt 1976896  T
Q  617 --aaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
      |||||||||||||||||||||||| ||||| |||||| ||  |||||||||||||    
T  1976897 aaaaaaatcaattctagaattagaagttacaa-ttctagtttatagtagaatcaatt 1976952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 517 - 671
Target Start/End: Original strand, 4894090 - 4894244
Alignment:
Q  517 ttttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgt 616  Q
    |||||||| |||||||| |  |||||||| ||||||||||||||| |||| ||||  || |||||||| ||||||||| ||||  ||||||||||||| |    
T  4894090 ttttgagtgaattgattctagctaaaattaagttgaaggtaaagtgatttatgtttagatacattcatttaaaagtgacttgaataataaatttgagtat 4894189  T
Q  617 aaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    || |||||||| |||||| | ||||||| |||||||| ||||||| |||||||||    
T  4894190 aataatcaattatagaatcaaaagctacgatttctagtttcaagttgaatcaatt 4894244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 577 - 669
Target Start/End: Complemental strand, 42982636 - 42982544
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaa 669  Q
    ||||||||||||||||||||||   |||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  42982636 acattcatgtaaaagtgagttgtaaaataaatttgtgtgtaaaaatcaattctggaatcaaaagctacaatttctagcttcaagtagaatcaa 42982544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 588 - 741
Target Start/End: Original strand, 16013714 - 16013886
Alignment:
Q  588 aaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagc-ttcaagtag------------------aatca 668  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || || ||||||                  |||||    
T  16013714 aaagtgagttgaccaataaatttgagtgtaaaaatcatttctagaattagaagttacaatttctggcttttaagtagagtcaattatggaggcttaatca 16013813  T
Q  669 attctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||  || || ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  16013814 attctacaatagagaaacgaaacatgttaaaatcaattctacacctctagaataaattttggctcctccaaaa 16013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 585 - 674
Target Start/End: Original strand, 37420196 - 37420287
Alignment:
Q  585 gtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattct--agaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    |||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||| ||||||| ||| ||||||||||||||||    
T  37420196 gtaaaagtgagttgaataataaatttgagtgtaaaaatcaattctagagaattagaagctacattttctagattctagtagaatcaattcta 37420287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 556 - 671
Target Start/End: Complemental strand, 42741089 - 42740975
Alignment:
Q  556 taaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagct 655  Q
    |||||| ||||||||| | | ||||| ||||||||||||||||  || ||||||||||||||||||||||||||||||| | ||||||||| |  |||||    
T  42741089 taaagtgatttgtgtttgaatacatt-atgtaaaagtgagttggacagtaaatttgagtgtaaaaatcaattctagaatcaaaagctacaaatcttagct 42740991  T
Q  656 tcaagtagaatcaatt 671  Q
    ||||||||||||||||    
T  42740990 tcaagtagaatcaatt 42740975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 726
Target Start/End: Complemental strand, 43501235 - 43501068
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| ||||||||| | | |||||||||||||| ||||||||   |||| ||||  ||| | ||||||||||| ||| | ||||||||| | |||| ||    
T  43501235 aaagtgatttgtgtttgtatacattcatgtaaaactgagttgaattataattttg--tgttagaatcaattctaaaatcaaaagctacaaatcctagttt 43501138  T
Q  657 caagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaatt 726  Q
    ||||||||||||||||||||| | || |||||||||||| | ||||||||||||| ||| || |||||||    
T  43501137 caagtagaatcaattctacttgaaagcaaccaaacatgtcagaatcaattctacagctccaggatcaatt 43501068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 528 - 673
Target Start/End: Complemental strand, 44439395 - 44439249
Alignment:
Q  528 ttgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaatt 627  Q
    ||||| ||| ||| || |||||| || ||||||| |||| |||| ||| |  || ||||||||||||||||| |||||||||||||||| ||||||||||    
T  44439395 ttgatcatggctataagtgagttaaatgtaaagtgatttatgtttggatatgtttatgtaaaagtgagttgaacaataaatttgagtgttaaaatcaatt 44439296  T
Q  628 ctagaattagaagctacaatttctagcttcaag-tagaatcaattct 673  Q
     |||||| | ||||| ||| || |||||||||| |||||||||||||    
T  44439295 ttagaatcaaaagctccaaattttagcttcaagttagaatcaattct 44439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 673
Target Start/End: Complemental strand, 7630021 - 7629866
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttg-tgttcggacacattcatgtaaaagtgagttgaccaataaatttgagt 614  Q
    |||||||||||||||||||||  ||||| ||||||||| ||||||| ||||  |||| ||| | |||   |||||||||| |||| |||| |||||||||    
T  7630021 attttgagtaaattgattatg--taaaagtgagttgaatgtaaagtgattttatgtttggatatattttcgtaaaagtgaattgaacaatgaatttgagt 7629924  T
Q  615 gtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattct 673  Q
    ||||| |||||||||||| | |||||||  ||| |||||||||||| |||||||||||||    
T  7629923 gtaaatatcaattctagagtaagaagct--aatctctagcttcaagttagaatcaattct 7629866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 557 - 674
Target Start/End: Original strand, 33019129 - 33019246
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| ||||||||| |||  |||||||||||||||||||||| | ||||||||  |||| ||||||||||||| ||  | ||||||||| |||||||||    
T  33019129 aaagtgatttgtgtttggatgcattcatgtaaaagtgagttgaactataaatttatgtgtgaaaatcaattctaaaaccaaaagctacaaattctagctt 33019228  T
Q  657 caagtagaatcaattcta 674  Q
    ||| || |||||||||||    
T  33019229 caaatataatcaattcta 33019246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 664 - 741
Target Start/End: Complemental strand, 40582735 - 40582659
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||||||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  40582735 aatcaattctactttagtg-aaccaaacatgttaaaatcaattctacacctctagaatcaattttggctcttccaaaa 40582659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 557 - 676
Target Start/End: Complemental strand, 13912899 - 13912780
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| ||||||||| ||| ||| |||||||||| |||||||| |  |||||||| |||||||||| ||||||||||| | ||  ||||| |||||||||    
T  13912899 aaagtgatttgtgtttggatacaatcatgtaaaaatgagttgaacggtaaatttgtgtgtaaaaattaattctagaataaaaaattacaaattctagctt 13912800  T
Q  657 caagtagaatcaattctact 676  Q
    || ||||||| |||||||||    
T  13912799 catgtagaataaattctact 13912780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 636 - 741
Target Start/End: Complemental strand, 43717357 - 43717252
Alignment:
Q  636 agaagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcct 735  Q
    ||||||||||| |||||||||||||||||||||||||||||    |  | |||||||||| |||||||||||||||  |||||||||||||||  | |||    
T  43717357 agaagctacaaattctagcttcaagtagaatcaattctactaatcaatatccaaacatgtcaaaatcaattctacacatctagaatcaattttaacacct 43717258  T
Q  736 ccaaaa 741  Q
    ||||||    
T  43717257 ccaaaa 43717252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 585 - 740
Target Start/End: Complemental strand, 9943490 - 9943334
Alignment:
Q  585 gtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattctactttatagg 683  Q
    |||||||| |||||| |||||||||| |||| ||||| ||  | || | ||  ||||||||| | ||||||||||| ||||||||||||||  | | ||     
T  9943490 gtaaaagtaagttgaacaataaatttcagtgaaaaaaccatgtttacacttgaaagctacaaatcctagcttcaagctagaatcaattctaagtgagagc 9943391  T
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaa 740  Q
    ||||||||||||||||||||||| |||| ||  |||||||||||||| | |||||||    
T  9943390 aaccaaacatgttaaaatcaattttacaccttcagaatcaattttggttgctccaaa 9943334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 538 - 673
Target Start/End: Complemental strand, 16518909 - 16518775
Alignment:
Q  538 ctaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattag 637  Q
    |||||| |||||||| |||||| | ||||||||| ||| ||||||||||||||||||||||| | ||||||||| | |||||| || ||  || ||| |     
T  16518909 ctaaaagtgagttgagggtaaaatgatttgtgtttggatacattcatgtaaaagtgagttgaactataaatttgtgcgtaaaagtc-atcttataatcaa 16518811  T
Q  638 aagctacaatttctagcttcaagtagaatcaattct 673  Q
    ||||||||| | ||| |||| |||||||||||||||    
T  16518810 aagctacaaatcctatcttctagtagaatcaattct 16518775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 15220804 - 15220886
Alignment:
Q  527 attgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatt 609  Q
    |||||||||||| |||| ||||||||| ||||||| |||| |||| ||| |||||||||| |||||||||||| |||||||||    
T  15220804 attgattatgacgaaaagtgagttgaatgtaaagtgatttatgtttggatacattcatgttaaagtgagttgaacaataaatt 15220886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 681 - 741
Target Start/End: Complemental strand, 7629832 - 7629772
Alignment:
Q  681 aggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||| |||||||||||||||    
T  7629832 aggaaccaaacatgacaaaatcaattctacacctctagaatcaatcttggctcctccaaaa 7629772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 622
Target Start/End: Original strand, 680247 - 680328
Alignment:
Q  541 aaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaat 622  Q
    |||||||||||||||||||||  |||||||| | | |||||||||||||||||||||||    ||||||| |||||||||||    
T  680247 aaattgagttgaaggtaaagtgttttgtgtttgcatacattcatgtaaaagtgagttgaattctaaattttagtgtaaaaat 680328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 605 - 674
Target Start/End: Original strand, 10618962 - 10619031
Alignment:
Q  605 aaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    |||||||||||| |||||||||| |||||| | |||||  ||||||||||||||| ||||||||||||||    
T  10618962 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 10619031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 674
Target Start/End: Complemental strand, 22536110 - 22535993
Alignment:
Q  557 aaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagctt 656  Q
    ||||| ||||||||| ||| ||||| |||||||| |||||| | | |||||| || ||| |||||| ||||||| ||| | ||||| ||| |||||  ||    
T  22536110 aaagtgatttgtgtttggatacatttatgtaaaaatgagtttaactataaatatgtgtgcaaaaattaattctaaaatcaaaagcttcaaattctaaatt 22536011  T
Q  657 caagtagaatcaattcta 674  Q
    ||||||||||||||||||    
T  22536010 caagtagaatcaattcta 22535993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 638 - 730
Target Start/End: Original strand, 21234579 - 21234671
Alignment:
Q  638 aagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttgg 730  Q
    ||||||||| |||||||||||||||||||||||||||||||| |    |||||| ||  ||||||||||||||  ||||| ||||||| ||||    
T  21234579 aagctacaaattctagcttcaagtagaatcaattctactttacaacgtccaaacctgccaaaatcaattctactcctctaaaatcaatattgg 21234671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 536 - 634
Target Start/End: Complemental strand, 33502367 - 33502272
Alignment:
Q  536 gactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaat 634  Q
    |||||||| | ||||||| ||||||| ||||||||| ||| |||||   ||||||||||||||| | |||||| || ||||||||||||||| ||||||    
T  33502367 gactaaaagtaagttgaatgtaaagtgatttgtgtttggatacatt---gtaaaagtgagttgaactataaatatgtgtgtaaaaatcaattttagaat 33502272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 40401575 - 40401671
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttga 612  Q
    ||||||||| ||||| ||   ||||||| ||||||||||||| | |||||| |||| ||| |||||||||||||||| |||||| ||||||| ||||    
T  40401575 attttgagtgaattggttcctactaaaaatgagttgaaggtagactaatttatgtttggatacattcatgtaaaagtcagttgaacaataaacttga 40401671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 584 - 670
Target Start/End: Complemental strand, 7630278 - 7630191
Alignment:
Q  584 tgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttca-agtagaatcaat 670  Q
    ||||||||| |||||| ||||  | ||||||| |||||||||||||||||| | |||||||||| |||||||||| | ||||||||||    
T  7630278 tgtaaaagttagttgaacaatgtacttgagtggaaaaatcaattctagaatcaaaagctacaatgtctagcttcacattagaatcaat 7630191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 591 - 662
Target Start/End: Original strand, 41494078 - 41494149
Alignment:
Q  591 gtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagta 662  Q
    |||| ||||||||||||||| |||||||||||||||| || ||| ||||||||||||||  ||||| |||||    
T  41494078 gtgaattgaccaataaatttaagtgtaaaaatcaattataaaatcagaagctacaattttcagcttaaagta 41494149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 666
Target Start/End: Complemental strand, 4779197 - 4779111
Alignment:
Q  580 ttcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaat 666  Q
    |||||||||| |||| |||| |||||||||||||| || |||| ||||||| ||| | ||||||||| || ||| ||||||||||||    
T  4779197 ttcatgtaaatgtgaattgagcaataaatttgagtttataaataaattctaaaataaaaagctacaaattatagtttcaagtagaat 4779111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 489 - 673
Target Start/End: Original strand, 3476334 - 3476519
Alignment:
Q  489 tgtttggttctgcggtgagaaatgttaattttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaa 588  Q
    |||||||||||| ||||| |||  || ||||| ||| |||||||| ||  ||||| |||| |||| || |||| || | ||||  || ||||| ||  |     
T  3476334 tgtttggttctgtggtgacaaaaattgattttaagtgaattgattctggataaaagtgagctgaaagtgaagtgatatatgtttagatacatttatacac 3476433  T
Q  589 aagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaag-tagaatcaattct 673  Q
    |||| |||||| ||||| |||||| ||||||||| ||||||||||| | |||||  ||||| |||||| ||| |||||||||||||    
T  3476434 aagttagttgaacaatacatttgaatgtaaaaataaattctagaatcaaaagctctaatttttagctttaagttagaatcaattct 3476519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 634
Target Start/End: Original strand, 11759800 - 11759909
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||| ||| ||||| ||||||||||||||| |  |||||||| | | ||| | ||||||  |||| |||| | |||||||||  |||||||||||    
T  11759800 aaattgattttgattaaaagtgagttgaaggtaaattggtttgtgtttgtatacacttatgtaagcgtgatttgaactataaatttgtatgtaaaaatca 11759899  T
Q  625 attctagaat 634  Q
    ||||||||||    
T  11759900 attctagaat 11759909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 671
Target Start/End: Complemental strand, 30503360 - 30503207
Alignment:
Q  516 attttgagtaaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtg 615  Q
    ||||||||| |||||||| ||||||||| | ||||||||||||| | |||| |||| ||| |   || ||||||| |||||| |    ||||||   |||    
T  30503360 attttgagtgaattgattctgactaaaagttagttgaaggtaaactgatttttgtttggataa--tcgtgtaaaaatgagttcaagtttaaattcatgtg 30503263  T
Q  616 taaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||||| |||| | ||||||| | | || |||||||||||||||||||    
T  30503262 taaaaatcaattcttgaatcaaaagctacgaatcctggcttcaagtagaatcaatt 30503207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 661
Target Start/End: Original strand, 33961978 - 33962058
Alignment:
Q  581 tcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagt 661  Q
    |||||||||| ||| |||| |||||||||||||| |||||||||||| |||||| | || || ||||||| ||||| ||||    
T  33961978 tcatgtaaaaatgacttgaacaataaatttgagtctaaaaatcaattatagaatcaaaaactccaatttcaagcttaaagt 33962058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 686 - 741
Target Start/End: Complemental strand, 16519411 - 16519356
Alignment:
Q  686 ccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||||  |||||||||||||||| |||||||||||||||||  ||||||||||    
T  16519411 ccaaacataataaaatcaattctacacctctagaatcaattttgcttcctccaaaa 16519356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 631 - 669
Target Start/End: Complemental strand, 488603 - 488565
Alignment:
Q  631 gaattagaagctacaatttctagcttcaagtagaatcaa 669  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  488603 gaattagaagctacaatttctagcctcaagtagaatcaa 488565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 687 - 741
Target Start/End: Original strand, 1976986 - 1977040
Alignment:
Q  687 caaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||||| ||||||||||  | | |||||||||||||||||||||||||||||    
T  1976986 caaacatgtcaaaatcaatttcaaacctctagaatcaattttggctcctccaaaa 1977040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 587 - 669
Target Start/End: Original strand, 3654631 - 3654713
Alignment:
Q  587 aaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaa 669  Q
    ||||||||||| | |||||| |||| |||||||||||| || |||||||||| | ||| |||||| | |||||||| ||||||    
T  3654631 aaaagtgagttaaacaataagtttgtgtgtaaaaatcagttttagaattagatgatacgatttcttgtttcaagtaaaatcaa 3654713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 649
Target Start/End: Complemental strand, 37287897 - 37287795
Alignment:
Q  547 agttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaa 646  Q
    ||||||||||||| |||||| ||||   | |||||||||||| ||||||| || ||||||| |||| | ||   |||||||||||||||  |||||||||    
T  37287897 agttgaaggtaaaataatttatgtttatatacattcatgtaatagtgagtcgaacaataaaattgaatctacggatcaattctagaattttaagctacaa 37287798  T
Q  647 ttt 649  Q
    |||    
T  37287797 ttt 37287795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 627
Target Start/End: Original strand, 44147944 - 44147994
Alignment:
Q  577 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaatt 627  Q
    |||||||| |||||||||||||| ||||||||||||  |||||||||||||    
T  44147944 acattcatctaaaagtgagttgaacaataaatttgaaagtaaaaatcaatt 44147994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 668
Target Start/End: Original strand, 2002718 - 2002779
Alignment:
Q  607 atttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatca 668  Q
    ||||| ||||||||||||||| |||||| | || |||||| | |||||||||||||||||||    
T  2002718 atttgtgtgtaaaaatcaattttagaatgaaaaactacaaatcctagcttcaagtagaatca 2002779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 666
Target Start/End: Original strand, 5532973 - 5533113
Alignment:
Q  525 aaattgattatgactaaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatca 624  Q
    ||||||||||| ||||||| ||||||  | ||||| | |||||| || ||| || |||||||||| |||||||||   ||||||||  ||||  ||||||    
T  5532973 aaattgattat-actaaaagtgagttacaagtaaacttatttgtttttggatacgttcatgtaaatgtgagttgaattataaatttatgtgtttaaatca 5533071  T
Q  625 attctagaattagaagctacaatttctagcttcaagtagaat 666  Q
    |||  ||||| | ||||||||| |  ||||||||||||||||    
T  5533072 atttaagaatcaaaagctacaaatagtagcttcaagtagaat 5533113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 727
Target Start/End: Original strand, 37420317 - 37420358
Alignment:
Q  686 ccaaacatgttaaaatcaattctacatctctagaatcaattt 727  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  37420317 ccaaacatgtcaaaatcaattctacacctctagaatcaattt 37420358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 741
Target Start/End: Complemental strand, 44439217 - 44439160
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    |||||||||||| ||||| ||||| ||| || ||||||||||||||||||||| ||||    
T  44439217 aaccaaacatgtcaaaattaattcaacacctttagaatcaattttggctcctctaaaa 44439160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 653
Target Start/End: Complemental strand, 7139743 - 7139692
Alignment:
Q  601 caataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctag 653  Q
    |||||||||||| ||||||||||||||||||||| | |||||| |||||||||    
T  7139743 caataaatttgattgtaaaaatcaattctagaatca-aagctataatttctag 7139692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 615 - 671
Target Start/End: Complemental strand, 21659773 - 21659717
Alignment:
Q  615 gtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaatt 671  Q
    |||||||||||||||||||| | |||||||||||| ||||| | ||||||| |||||    
T  21659773 gtaaaaatcaattctagaatcataagctacaatttttagctacgagtagaaacaatt 21659717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 623
Target Start/End: Complemental strand, 7632854 - 7632815
Alignment:
Q  584 tgtaaaagtgagttgaccaataaatttgagtgtaaaaatc 623  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  7632854 tgtaaaagtgagttgaacaataaacttgagtgtaaaaatc 7632815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 727
Target Start/End: Original strand, 15928552 - 15928595
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattt 727  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||    
T  15928552 aaccaaacatgtcaaaatcaattctacacctccagaatcaattt 15928595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 634
Target Start/End: Complemental strand, 37541387 - 37541332
Alignment:
Q  579 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaat 634  Q
    |||||||||||||| |||| | |||||||||||||  |||||||||||| ||||||    
T  37541387 attcatgtaaaagtaagttaaacaataaatttgaggctaaaaatcaattgtagaat 37541332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 732
Target Start/End: Original strand, 42774958 - 42775001
Alignment:
Q  689 aacatgttaaaatcaattctacatctctagaatcaattttggct 732  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||    
T  42774958 aacatgtcaaaatcaattctatacctctagaatcaattttggct 42775001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 731
Target Start/End: Original strand, 44670992 - 44671059
Alignment:
Q  664 aatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaattttggc 731  Q
    |||||||||||||||| |  || ||||||||  |||| |||||||||  |||||||||||||||||||    
T  44670992 aatcaattctactttagaacaatcaaacatgccaaaagcaattctacccctctagaatcaattttggc 44671059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 703 - 741
Target Start/End: Original strand, 680420 - 680458
Alignment:
Q  703 aattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  680420 aattctacacctctagaatcaattttagctcctccaaaa 680458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 622 - 664
Target Start/End: Complemental strand, 1305904 - 1305862
Alignment:
Q  622 tcaattctagaattagaagctacaatttctagcttcaagtaga 664  Q
    |||||| |||||| ||||||| |||||||||||||||||||||    
T  1305904 tcaattatagaatcagaagctgcaatttctagcttcaagtaga 1305862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 638 - 728
Target Start/End: Original strand, 7632642 - 7632732
Alignment:
Q  638 aagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaatttt 728  Q
    ||||||||| || ||||||||||||| |||| |||||||  |  | || ||||||||||  ||||||||| ||| || |||||||||||||    
T  7632642 aagctacaaattttagcttcaagtaggatcagttctactcgaaggcaatcaaacatgttggaatcaattcgacacctttagaatcaatttt 7632732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 602 - 724
Target Start/End: Complemental strand, 16488395 - 16488273
Alignment:
Q  602 aataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattctactttataggaaccaaacatgttaaaat 701  Q
    ||||||||||| ||| | ||||||||||||||| |  |||| ||||||||||||  | | | ||||||||||||   | || |||||| ||||| | |||    
T  16488395 aataaatttgattgttataatcaattctagaatcaacagctccaatttctagctggaggcaaaatcaattctacacgagagcaaccaaccatgtcagaat 16488296  T
Q  702 caattctacatctctagaatcaa 724  Q
    ||||  |||| ||||||||||||    
T  16488295 caatcatacacctctagaatcaa 16488273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 687 - 741
Target Start/End: Original strand, 37649595 - 37649649
Alignment:
Q  687 caaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||||| ||||||||||| | | ||| ||||||||||||| |||||||||||    
T  37649595 caaacatgtcaaaatcaattccatacctcaagaatcaattttgactcctccaaaa 37649649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 741
Target Start/End: Complemental strand, 4778516 - 4778463
Alignment:
Q  688 aaacatgttaaaatcaattctacatctctagaatcaattttggctcctccaaaa 741  Q
    ||||||||||| ||||||||||||  |||||||| ||||||| ||||| |||||    
T  4778516 aaacatgttaacatcaattctacacttctagaattaattttgactccttcaaaa 4778463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 593 - 674
Target Start/End: Complemental strand, 12037137 - 12037056
Alignment:
Q  593 gagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 674  Q
    ||||||| | |||||||||  | | |||||||||| |||||| | ||||||||| || ||| ||||| ||||||||||||||    
T  12037137 gagttgaaccataaatttgtttatgaaaatcaattgtagaatcaaaagctacaaattttagtttcaactagaatcaattcta 12037056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 626
Target Start/End: Complemental strand, 28206801 - 28206720
Alignment:
Q  545 tgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaat 626  Q
    ||||||||| ||||| |||||| ||||  |  ||||||||||||||||  |||||  ||||||||||||  |||||||||||    
T  28206801 tgagttgaatgtaaattaatttatgtttaggtacattcatgtaaaagtttgttgaataataaatttgagactaaaaatcaat 28206720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 543 - 671
Target Start/End: Complemental strand, 17259 - 17131
Alignment:
Q  543 attgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagct 642  Q
    ||||| ||||||  ||||| |||| |||| | | ||||| ||| ||| | |||||||  ||||||| | |||||||||||| ||| |||||| |||||||    
T  17259 attgaattgaagaaaaagtgatttatgtttgaatacattaatgaaaacgggagttgaataataaatctcagtgtaaaaatctattttagaatcagaagct 17160  T
Q  643 acaatttctagcttcaagtagaatcaatt 671  Q
    || ||||||||   |||||||||||||||    
T  17159 acgatttctagacacaagtagaatcaatt 17131  T

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Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 684 - 730
Target Start/End: Complemental strand, 31793 - 31747
Alignment:
Q  684 aaccaaacatgttaaaatcaattctacatctctagaatcaattttgg 730  Q
    |||||||||||| | ||||||||||||| ||||||||||||||||||    
T  31793 aaccaaacatgtcagaatcaattctacacctctagaatcaattttgg 31747  T

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Target: scaffold0360 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 726
Target Start/End: Original strand, 13285 - 13351
Alignment:
Q  660 gtagaatcaattctactttataggaaccaaacatgttaaaatcaattctacatctctagaatcaatt 726  Q
    |||||||||||||||||| | || ||||||||||||||  ||||||| |||| ||  ||||||||||    
T  13285 gtagaatcaattctacttcaaagcaaccaaacatgttagcatcaattttacaccttcagaatcaatt 13351  T

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